A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
| A3 | Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |
| AATtools | Reliability and Scoring Routines for the Approach-Avoidance Task |
| ABACUS | Apps Based Activities for Communicating and Understanding Statistics |
| abbreviate | Readable String Abbreviation |
| abbyyR | Access to Abbyy Optical Character Recognition (OCR) API |
| abc | Tools for Approximate Bayesian Computation (ABC) |
| abc.data | Data Only: Tools for Approximate Bayesian Computation (ABC) |
| ABC.RAP | Array Based CpG Region Analysis Pipeline |
| abcADM | Fit Accumulated Damage Models and Estimate Reliability using ABC |
| ABCanalysis | Computed ABC Analysis |
| abclass | Angle-Based Large-Margin Classifiers |
| ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |
| ABCp2 | Approximate Bayesian Computational Model for Estimating P2 |
| abcrf | Approximate Bayesian Computation via Random Forests |
| abcrlda | Asymptotically Bias-Corrected Regularized Linear Discriminant Analysis |
| abctools | Tools for ABC Analyses |
| abd | The Analysis of Biological Data |
| abdiv | Alpha and Beta Diversity Measures |
| abe | Augmented Backward Elimination |
| abess | Fast Best Subset Selection |
| abglasso | Adaptive Bayesian Graphical Lasso |
| ABHgenotypeR | Easy Visualization of ABH Genotypes |
| abind | Combine Multidimensional Arrays |
| abjData | Databases Used Routinely by the Brazilian Jurimetrics Association |
| abjutils | Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association |
| abn | Modelling Multivariate Data with Additive Bayesian Networks |
| abnormality | Measure a Subject's Abnormality with Respect to a Reference Population |
| abodOutlier | Angle-Based Outlier Detection |
| ABPS | The Abnormal Blood Profile Score to Detect Blood Doping |
| abstr | R Interface to the A/B Street Transport System Simulation Software |
| abstractr | An R-Shiny Application for Creating Visual Abstracts |
| abtest | Bayesian A/B Testing |
| abundant | High-Dimensional Principal Fitted Components and Abundant Regression |
| Ac3net | Inferring Directional Conservative Causal Core Gene Networks |
| ACA | Abrupt Change-Point or Aberration Detection in Point Series |
| academictwitteR | Access the Twitter Academic Research Product Track V2 API Endpoint |
| acc | Exploring Accelerometer Data |
| acca | A Canonical Correlation Analysis with Inferential Guaranties |
| accelerometry | Functions for Processing Accelerometer Data |
| accelmissing | Missing Value Imputation for Accelerometer Data |
| accept | The Acute COPD Exacerbation Prediction Tool (ACCEPT) |
| AcceptanceSampling | Creation and Evaluation of Acceptance Sampling Plans |
| accessibility | Transport Accessibility Measures |
| accessrmd | Improving the Accessibility of 'rmarkdown' Documents |
| accrual | Bayesian Accrual Prediction |
| accrualPlot | Accrual Plots and Predictions for Clinical Trials |
| accSDA | Accelerated Sparse Discriminant Analysis |
| accucor | Natural Abundance Correction of Mass Spectrometer Data |
| ACDC | Analysis of Congruent Diversification Classes |
| acdcR | Agro-Climatic Data by County |
| ACDm | Tools for Autoregressive Conditional Duration Models |
| ace2fastq | ACE File to FASTQ Converter |
| acebayes | Optimal Bayesian Experimental Design using the ACE Algorithm |
| aceEditor | The 'Ace' Editor as a HTML Widget |
| ACEP | Análisis Computacional de Eventos de Protesta |
| acepack | ACE and AVAS for Selecting Multiple Regression Transformations |
| ACEsearch | 'ACE' Search Engine API |
| ACEt | Estimation of Dynamic Heritability and Comparison of Twin Models |
| acfMPeriod | Robust Estimation of the ACF from the M-Periodogram |
| acid | Analysing Conditional Income Distributions |
| acled.api | Automated Retrieval of ACLED Conflict Event Data |
| ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |
| acnr | Annotated Copy-Number Regions |
| acopula | Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas |
| AcousticNDLCodeR | Coding Sound Files for Use with NDL |
| acp | Autoregressive Conditional Poisson |
| acroname | Engine for Acronyms and Initialisms |
| AcrossTic | A Cost-Minimal Regular Spanning Subgraph with TreeClust |
| acrt | Autocorrelation Robust Testing |
| acs | Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census |
| acss | Algorithmic Complexity for Short Strings |
| acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |
| ACSWR | A Companion Package for the Book "A Course in Statistics with R" |
| act | Aligned Corpus Toolkit |
| ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |
| ActCR | Extract Circadian Rhythms Metrics from Actigraphy Data |
| actel | Acoustic Telemetry Data Analysis |
| ActFrag | Activity Fragmentation Metrics Extracted from Minute Level Activity Data |
| actilifecounts | Generate Activity Counts from Raw Accelerometer Data |
| activAnalyzer | A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical Behavior Data |
| activatr | Utilities for Parsing and Plotting Activities |
| ActiveDriver | Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites |
| ActiveDriverWGS | A Driver Discovery Tool for Cancer Whole Genomes |
| activegp | Gaussian Process Based Design and Analysis for the Active Subspace Method |
| ActivePathways | Integrative Pathway Enrichment Analysis of Multivariate Omics Data |
| activity | Animal Activity Statistics |
| activityCounts | Generate ActiLife Counts |
| activityGCMM | Circular Mixed Effect Mixture Models of Animal Activity Patterns |
| ActivityIndex | Activity Index Calculation using Raw 'Accelerometry' Data |
| activPAL | Advanced Processing and Chart Generation from activPAL Events Files |
| actogrammr | Read in Activity Data and Plot Actograms |
| actuar | Actuarial Functions and Heavy Tailed Distributions |
| actuaryr | Develop Actuarial Models |
| AcuityView | A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity |
| acumos | 'Acumos' R Interface |
| ACV | Optimal Out-of-Sample Forecast Evaluation and Testing under Stationarity |
| ACWR | Acute Chronic Workload Ratio Calculation |
| ada | The R Package Ada for Stochastic Boosting |
| adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |
| adace | Estimator of the Adherer Average Causal Effect |
| adagio | Discrete and Global Optimization Routines |
| adaHuber | Adaptive Huber Estimation and Regression |
| adamethods | Archetypoid Algorithms and Anomaly Detection |
| adana | Adaptive Nature-Inspired Algorithms for Hybrid Genetic Optimization |
| AdapSamp | Adaptive Sampling Algorithms |
| adapt4pv | Adaptive Approaches for Signal Detection in Pharmacovigilance |
| adaptalint | Check Code Style Painlessly |
| adaptDiag | Bayesian Adaptive Designs for Diagnostic Trials |
| AdaptFitOS | Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests |
| AdaptGauss | Gaussian Mixture Models (GMM) |
| adaptiveGPCA | Adaptive Generalized PCA |
| AdaptiveSparsity | Adaptive Sparsity Models |
| adaptivetau | Tau-Leaping Stochastic Simulation |
| adaptMCMC | Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler |
| adaptMT | Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information |
| adaptr | Adaptive Trial Simulator |
| ADAPTS | Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells |
| adaptTest | Adaptive Two-Stage Tests |
| AdaSampling | Adaptive Sampling for Positive Unlabeled and Label Noise Learning |
| adass | Adaptive Smoothing Spline (AdaSS) Estimator for the Function-on-Function Linear Regression |
| ADCT | Adaptive Design in Clinical Trials |
| add2ggplot | Add to 'ggplot2' |
| addhaz | Binomial and Multinomial Additive Hazard Models |
| addhazard | Fit Additive Hazards Models for Survival Analysis |
| addinsJoaoMelo | Addins Made of Joao Melo |
| addinslist | Discover and Install Useful RStudio Addins |
| addinsOutline | 'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project |
| additive | Bindings for Additive TidyModels |
| additiveDEA | Additive Data Envelopment Analysis Models |
| additivityTests | Additivity Tests in the Two Way Anova with Single Sub-Class Numbers |
| addreg | Additive Regression for Discrete Data |
| addScales | Adds Labeled Center Line and Scale Lines/Regions to Trellis Plots |
| ADDT | Analysis of Accelerated Destructive Degradation Test Data |
| ade4 | Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences |
| ade4TkGUI | 'ade4' Tcl/Tk Graphical User Interface |
| adea | Alternate DEA Package |
| adegenet | Exploratory Analysis of Genetic and Genomic Data |
| adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |
| adehabitatHR | Home Range Estimation |
| adehabitatHS | Analysis of Habitat Selection by Animals |
| adehabitatLT | Analysis of Animal Movements |
| adehabitatMA | Tools to Deal with Raster Maps |
| adephylo | Exploratory Analyses for the Phylogenetic Comparative Method |
| adepro | A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles |
| adept | Adaptive Empirical Pattern Transformation |
| adeptdata | Accelerometry Data Sets |
| AdequacyModel | Adequacy of Probabilistic Models and General Purpose Optimization |
| ADER | Data Analysis in Ecology |
| adespatial | Multivariate Multiscale Spatial Analysis |
| adfExplorer | Import from and Export to Amiga Disk Files |
| ADGofTest | Anderson-Darling GoF test |
| adheRenceRX | Assess Medication Adherence from Pharmaceutical Claims Data |
| AdhereR | Adherence to Medications |
| AdhereRViz | Adherence to Medications |
| adimpro | Adaptive Smoothing of Digital Images |
| adiv | Analysis of Diversity |
| adjclust | Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix |
| adjROC | Computing Sensitivity at a Fix Value of Specificity and Vice Versa |
| adjSURVCI | Parameter and Adjusted Probability Estimation for Right-Censored Data |
| adjustedcranlogs | Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs |
| adklakedata | Adirondack Long-Term Lake Data |
| adlift | An Adaptive Lifting Scheme Algorithm |
| admiral | ADaM in R Asset Library |
| admiral.test | Test Data for the 'admiral' Package |
| admisc | Adrian Dusa's Miscellaneous |
| AdMit | Adaptive Mixture of Student-t Distributions |
| admix | Package Admix for Admixture (aka Contamination) Models |
| admixr | An Interface for Running 'ADMIXTOOLS' Analyses |
| ADMM | Algorithms using Alternating Direction Method of Multipliers |
| admmDensestSubmatrix | Alternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem |
| ADMMnet | Regularized Model with Selecting the Number of Non-Zeros |
| ADMMsigma | Penalized Precision Matrix Estimation via ADMM |
| ADMUR | Ancient Demographic Modelling Using Radiocarbon |
| adnuts | No-U-Turn MCMC Sampling for 'ADMB' Models |
| adobeanalyticsr | R Client for 'Adobe Analytics' API 2.0 |
| adoptr | Adaptive Optimal Two-Stage Designs in R |
| ADP | Adoption Probability, Triers and Users Rate of a New Product |
| ADPclust | Fast Clustering Using Adaptive Density Peak Detection |
| ADPF | Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay |
| adpss | Design and Analysis of Locally or Globally Efficient Adaptive Designs |
| ads | Spatial Point Patterns Analysis |
| adsDataHubR | Google Ads Data Hub API Client |
| AdvancedBasketballStats | Advanced Basketball Statistics |
| AdvBinomApps | Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information |
| AdvDif4 | Solving 1D Advection Bi-Flux Diffusion Equation |
| adventr | Interactive R Tutorials to Accompany Field (2016), "An Adventure in Statistics" |
| ADVICE | Automatic Direct Variable Selection via Interrupted Coefficient Estimation |
| adw | Angular Distance Weighting Interpolation |
| adwave | Wavelet Analysis of Genomic Data from Admixed Populations |
| adwordsR | Access the 'Google Adwords' API |
| AEDForecasting | Change Point Analysis in ARIMA Forecasting |
| AEenrich | Adverse Event Enrichment Tests |
| AEP | Statistical Modelling for Asymmetric Exponential Power Distribution |
| AER | Applied Econometrics with R |
| AeRobiology | A Computational Tool for Aerobiological Data |
| AeroSampleR | Estimate Aerosol Particle Collection Through Sample Lines |
| AF | Model-Based Estimation of Confounder-Adjusted Attributable Fractions |
| afc | Generalized Discrimination Score |
| afdx | Diagnosis Performance Using Attributable Fraction |
| afex | Analysis of Factorial Experiments |
| affinity | Raster Georeferencing, Grid Affine Transforms, Cell Abstraction |
| affinitymatrix | Estimation of Affinity Matrix |
| affluenceIndex | Affluence (Richness) Indices |
| AFheritability | The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors |
| AFM | Atomic Force Microscope Image Analysis |
| afmToolkit | Functions for Atomic Force Microscope Force-Distance Curves Analysis |
| afpt | Tools for Modelling of Animal Flight Performance |
| AFR | Toolkit for Regression Analysis of Kazakhstan Banking Sector Data |
| africamonitor | Africa Macroeconomic Monitor Database API |
| aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |
| afthd | Accelerated Failure Time for High Dimensional Data with MCMC |
| ag5Tools | Toolbox for Downloading and Extracting Copernicus AgERA5 Data |
| AGD | Analysis of Growth Data |
| AggregateR | Aggregate Numeric, Date and Categorical Variables |
| aggregation | p-Value Aggregation Methods |
| AGHmatrix | Relationship Matrices for Diploid and Autopolyploid Species |
| aghq | Adaptive Gauss Hermite Quadrature for Bayesian Inference |
| aglm | Accurate Generalized Linear Model |
| agop | Aggregation Operators and Preordered Sets |
| AGPRIS | AGricultural PRoductivity in Space |
| agRee | Various Methods for Measuring Agreement |
| AgreementInterval | Agreement Interval of Two Measurement Methods |
| agricolae | Statistical Procedures for Agricultural Research |
| agricolaeplotr | Visualization of Design of Experiments from the 'agricolae' Package |
| agridat | Agricultural Datasets |
| agrifeature | Agriculture Image Feature |
| agriTutorial | Tutorial Analysis of Some Agricultural Experiments |
| agriwater | Evapotranspiration and Energy Fluxes Spatial Analysis |
| agrmt | Calculate Concentration and Dispersion in Ordered Rating Scales |
| agroclim | Climatic Indices for Agriculture |
| AgroR | Experimental Statistics and Graphics for Agricultural Sciences |
| AgroReg | Regression Analysis Linear and Nonlinear for Agriculture |
| agrostab | Stability Analysis for Agricultural Research |
| AgroTech | Data Analysis of Pesticide Application Technology |
| AGSDest | Estimation in Adaptive Group Sequential Trials |
| agtboost | Adaptive and Automatic Gradient Boosting Computations |
| agua | 'tidymodels' Integration with 'h2o' |
| agvgd | An R Implementation of the 'Align-GVGD' Method |
| ahaz | Regularization for Semiparametric Additive Hazards Regression |
| AHM | Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments |
| AHMbook | Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2 |
| ahMLE | Methods for the Additive Hazard Model |
| ahnr | An Implementation of the Artificial Hydrocarbon Networks |
| AhoCorasickTrie | Fast Searching for Multiple Keywords in Multiple Texts |
| AHPhybrid | AHP Hybrid Method |
| ahpsurvey | Analytic Hierarchy Process for Survey Data |
| ahptopsis2n | Hybrid Method for Multiple Criteria Decision-Making (MCDM) |
| AHSurv | Flexible Parametric Accelerated Hazards Models |
| aibd | Attraction Indian Buffet Distribution |
| AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |
| AID | Box-Cox Power Transformation |
| aidar | Tools for Reading AIDA Files |
| aif360 | Help Detect and Mitigate Bias in Machine Learning Models |
| AIG | Automatic Item Generator |
| aimPlot | Create Pie Like Plot for Completeness |
| aimsir17 | Irish Weather Observing Stations Hourly Records for 2017 |
| AIPW | Augmented Inverse Probability Weighting |
| aire.zmvm | Download Mexico City Pollution, Wind, and Temperature Data |
| airGR | Suite of GR Hydrological Models for Precipitation-Runoff Modelling |
| airGRdatassim | Ensemble-Based Data Assimilation with GR Hydrological Models |
| airGRiwrm | 'airGR' Integrated Water Resource Management |
| airGRteaching | Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) |
| aiRly | R Wrapper for 'Airly' API |
| AirMonitor | Air Quality Data Analysis |
| airportr | Convenience Tools for Working with Airport Data |
| airports | Data on Airports |
| airqualityES | Air Quality Measurements in Spain from 2011 to 2018 |
| airr | AIRR Data Representation Reference Library |
| airt | Evaluation of Algorithm Collections Using Item Response Theory |
| aiRthermo | Atmospheric Thermodynamics and Visualization |
| ajv | Another JSON Schema Validator |
| akc | Automatic Knowledge Classification |
| Ake | Associated Kernel Estimations |
| akiFlagger | Flags Acute Kidney Injury (AKI) |
| akima | Interpolation of Irregularly and Regularly Spaced Data |
| akmbiclust | Alternating K-Means Biclustering |
| akmedoids | Anchored Kmedoids for Longitudinal Data Clustering |
| alabama | Constrained Nonlinear Optimization |
| alakazam | Immunoglobulin Clonal Lineage and Diversity Analysis |
| ALassoSurvIC | Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data |
| albatross | PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |
| albopictus | Age-Structured Population Dynamics Model |
| ald | The Asymmetric Laplace Distribution |
| ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |
| aldvmm | Adjusted Limited Dependent Variable Mixture Models |
| ALEPlot | Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots |
| aLFQ | Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data |
| alfr | Connectivity to 'Alfresco' Content Management Repositories |
| alfred | Downloading Time Series from ALFRED Database for Various Vintages |
| algaeClassify | Determine Phytoplankton Functional Groups Based on Functional Traits |
| AlgDesign | Algorithmic Experimental Design |
| AlgebraicHaploPackage | Haplotype Two Snips Out of a Paired Group of Patients |
| algo | Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library |
| algorithmia | Allows you to Easily Interact with the Algorithmia Platform |
| aliases2entrez | Converts Human gene symbols to entrez IDs |
| allcontributors | Acknowledge all Contributors to a Project |
| alleHap | Allele Imputation and Haplotype Reconstruction from Pedigree Databases |
| allelematch | Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present |
| AlleleRetain | Allele Retention, Inbreeding, and Demography |
| AlleleShift | Predict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change |
| allestimates | Effect Estimates from All Models |
| Allspice | RNA-Seq Profile Classifier |
| alluvial | Alluvial Diagrams |
| almanac | Tools for Working with Recurrence Rules |
| alookr | Model Classifier for Binary Classification |
| alpaca | Fit GLM's with High-Dimensional k-Way Fixed Effects |
| alphabetr | Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells |
| alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |
| alphaOutlier | Obtain Alpha-Outlier Regions for Well-Known Probability Distributions |
| AlphaPart | Partition/Decomposition of Breeding Values by Paths of Information |
| alphashape3d | Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud |
| AlphaSimR | Breeding Program Simulations |
| alphastable | Inference for Stable Distribution |
| alphavantager | Lightweight R Interface to the Alpha Vantage API |
| alr4 | Data to Accompany Applied Linear Regression 4th Edition |
| ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |
| ALSM | Companion to Applied Linear Statistical Models |
| altadata | API Wrapper for Altadata.io |
| altair | Interface to 'Altair' |
| altfuelr | Provides an Interface to the NREL Alternate Fuels Locator |
| altmeta | Alternative Meta-Analysis Methods |
| ALTopt | Optimal Experimental Designs for Accelerated Life Testing |
| altR2 | Alternative Estimators to Adjusted R-Squared |
| ALUES | Agricultural Land Use Evaluation System |
| amanida | Meta-Analysis for Non-Integral Data |
| amanpg | Alternating Manifold Proximal Gradient Method for Sparse PCA |
| amap | Another Multidimensional Analysis Package |
| amapGeocode | An Interface to the 'AutoNavi Maps' API Geocoding Services |
| amapro | Thin Wrapper for Mapping Library 'AMap' by 'AutoNavi' |
| AMAPVox | LiDAR Data Voxelisation |
| ambhasGW | Ground Water Modelling |
| ambient | A Generator of Multidimensional Noise |
| ambiorix | Web Framework Inspired by 'Express.js' |
| AMCP | A Model Comparison Perspective |
| AMCTestmakeR | Generate LaTeX Code for Auto-Multiple-Choice (AMC) |
| Amelia | A Program for Missing Data |
| amelie | Anomaly Detection with Normal Probability Functions |
| amen | Additive and Multiplicative Effects Models for Networks and Relational Data |
| AmericanCallOpt | This package includes pricing function for selected American call options with underlying assets that generate payouts |
| amerifluxr | Interface to 'AmeriFlux' Data Services |
| amerika | American Politics-Inspired Color Palette Generator |
| AmesHousing | The Ames Iowa Housing Data |
| AmigaFFH | Commodore Amiga File Format Handler |
| ammiBayes | Bayesian Ammi Model for Continuous Data |
| ammistability | Additive Main Effects and Multiplicative Interaction Model Stability Parameters |
| AMModels | Adaptive Management Model Manager |
| AmmoniaConcentration | Un-Ionized Ammonia Concentration |
| aMNLFA | Automated Moderated Nonlinear Factor Analysis Using 'M-plus' |
| amp | Statistical Test for the Multivariate Point Null Hypotheses |
| ampd | An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals |
| AmpGram | Prediction of Antimicrobial Peptides |
| ampir | Predict Antimicrobial Peptides |
| AMPLE | Shiny Apps to Support Capacity Building on Harvest Control Rules |
| AmpliconDuo | Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts |
| AMR | Antimicrobial Resistance Data Analysis |
| amt | Animal Movement Tools |
| AmyloGram | Prediction of Amyloid Proteins |
| AnaCoDa | Analysis of Codon Data under Stationarity using a Bayesian Framework |
| anacor | Simple and Canonical Correspondence Analysis |
| analogsea | Interface to 'Digital Ocean' |
| analogue | Analogue and Weighted Averaging Methods for Palaeoecology |
| analogueExtra | Additional Functions for Use with the Analogue Package |
| analysisPipelines | Compose Interoperable Analysis Pipelines & Put Them in Production |
| analyzer | Data Analysis and Automated R Notebook Generation |
| anapuce | Tools for Microarray Data Analysis |
| AncestryMapper | Assigning Ancestry Based on Population References |
| AnchorRegression | Perform AnchorRegression |
| and | Construct Natural-Language Lists with Internationalization |
| Andromeda | Asynchronous Disk-Based Representation of Massive Data |
| andurinha | Make Spectroscopic Data Processing Easier |
| anesrake | ANES Raking Implementation |
| AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |
| angstroms | Tools for 'ROMS' the Regional Ocean Modeling System |
| aniDom | Inferring Dominance Hierarchies and Estimating Uncertainty |
| anim.plots | Simple Animated Plots for R |
| animalEKF | Extended Kalman Filters for Animal Movement |
| AnimalHabitatNetwork | Networks Characterising the Physical Configurations of Animal Habitats |
| animalTrack | Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data |
| animaltracker | Animal Tracker |
| animation | A Gallery of Animations in Statistics and Utilities to Create Animations |
| animint2 | Animated Interactive Grammar of Graphics |
| animl | A Collection of ML Tools for Conservation Research |
| anipaths | Animation of Multiple Trajectories with Uncertainty |
| aniview | Animate Shiny and R Markdown Content when it Comes into View |
| anMC | Compute High Dimensional Orthant Probabilities |
| ANN2 | Artificial Neural Networks for Anomaly Detection |
| anndata | 'anndata' for R |
| AnnoProbe | Annotate the Gene Symbols for Probes in Expression Array |
| annotater | Annotate Package Load Calls |
| AnnotationBustR | Extract Subsequences from GenBank Annotations |
| AnnuityRIR | Annuity Random Interest Rates |
| anocva | A Non-Parametric Statistical Test to Compare Clustering Structures |
| ANOM | Analysis of Means |
| anomalize | Tidy Anomaly Detection |
| anomaly | Detecting Anomalies in Data |
| ANOVAIREVA | Interactive Document for Working with Analysis of Variance |
| ANOVAreplication | Test ANOVA Replications by Means of the Prior Predictive p-Value |
| ANOVAShiny | Interactive Document for Working with Analysis of Variance |
| ANOVAShiny2 | Interactive Document for Working with Analysis of Variance |
| anovir | Analysis of Virulence |
| anscombiser | Create Datasets with Identical Summary Statistics |
| AntAngioCOOL | Anti-Angiogenic Peptide Prediction |
| antaresEditObject | Edit an 'Antares' Simulation |
| antaresProcessing | 'Antares' Results Processing |
| antaresRead | Import, Manipulate and Explore the Results of an 'Antares' Simulation |
| antaresViz | Antares Visualizations |
| anthro | Computation of the WHO Child Growth Standards |
| anthroplus | Computation of the WHO 2007 References for School-Age Children and Adolescents (5 to 19 Years) |
| AnthropMMD | An R Package for Smith's Mean Measure of Divergence (MMD) |
| Anthropometry | Statistical Methods for Anthropometric Data |
| AntibodyTiters | Antibody Titer Analysis of Vaccinated Patients |
| anticlust | Subset Partitioning via Anticlustering |
| antitrust | Tools for Antitrust Practitioners |
| antiword | Extract Text from Microsoft Word Documents |
| AntMAN | Anthology of Mixture Analysis Tools |
| ANTs | Animal Network Toolkit Software |
| anybadger | Create Custom Pipeline Badges |
| anyflights | Query 'nycflights13'-Like Air Travel Data for Given Years and Airports |
| anyLib | Install and Load Any Package from CRAN, Bioconductor or Github |
| anytime | Anything to 'POSIXct' or 'Date' Converter |
| ao | Alternating Optimization |
| aod | Analysis of Overdispersed Data |
| aods3 | Analysis of Overdispersed Data using S3 Methods |
| aoos | Another Object Orientation System |
| aopdata | Data from the 'Access to Opportunities Project (AOP)' |
| Aoptbdtvc | A-Optimal Block Designs for Comparing Test Treatments with Controls |
| aoristic | Generates Aoristic Probability Distributions |
| aos | Animate on Scroll Library for 'shiny' |
| AOV1R | Inference in the Balanced One-Way ANOVA Model with Random Factor |
| AovBay | Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel |
| apa | Format Outputs of Statistical Tests According to APA Guidelines |
| apache.sedona | R Interface for Apache Sedona |
| ApacheLogProcessor | Process the Apache Web Server Log Files |
| apaTables | Create American Psychological Association (APA) Style Tables |
| apaText | Create R Markdown Text for Results in the Style of the American Psychological Association (APA) |
| APAtree | Computation of the 'Area Potentially Available' (APA) to Trees |
| apc | Age-Period-Cohort Analysis |
| APCanalysis | Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons |
| apcf | Adapted Pair Correlation Function |
| APCI | A New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics |
| apcluster | Affinity Propagation Clustering |
| aPCoA | Covariate Adjusted PCoA Plot |
| APCtools | Routines for Descriptive and Model-Based APC Analysis |
| apdesign | An Implementation of the Additive Polynomial Design Matrix |
| ape | Analyses of Phylogenetics and Evolution |
| apercu | Quick Look at your Data |
| apex | Phylogenetic Methods for Multiple Gene Data |
| apexcharter | Create Interactive Chart with the JavaScript 'ApexCharts' Library |
| APFr | Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation |
| APfun | Geo-Processing Helper Functions |
| aphid | Analysis with Profile Hidden Markov Models |
| aphylo | Statistical Inference and Prediction of Annotations in Phylogenetic Trees |
| APIS | Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents |
| apisensr | Interface to 'episensr' for Sensitivity Analysis of Epidemiological Results |
| aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) |
| aplot | Decorate a 'ggplot' with Associated Information |
| aplpack | Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others |
| APML0 | Augmented and Penalized Minimization Method L0 |
| apng | Convert Png Files into Animated Png |
| apollo | Tools for Choice Model Estimation and Application |
| APPEstimation | Adjusted Prediction Model Performance Estimation |
| appler | 'Apple App Store' and 'iTunes' Data Extraction |
| applicable | A Compilation of Applicability Domain Methods |
| AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |
| appnn | Amyloid Propensity Prediction Neural Network |
| approximator | Bayesian Prediction of Complex Computer Codes |
| approxmatch | Approximately Optimal Fine Balance Matching with Multiple Groups |
| approxOT | Approximate and Exact Optimal Transport Methods |
| aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998) |
| aprof | Amdahl's Profiler, Directed Optimization Made Easy |
| apsimx | Inspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic |
| apt | Asymmetric Price Transmission |
| APtools | Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times |
| apTreeshape | Analyses of Phylogenetic Treeshape |
| apyramid | Visualize Population Pyramids Aggregated by Age |
| AQEval | Air Quality Evaluation |
| AQLSchemes | Retrieving Acceptance Sampling Schemes |
| aqp | Algorithms for Quantitative Pedology |
| AquaBPsim | Aquaculture Breeding Program Simulation |
| AQuadtree | Confidentiality of Spatial Point Data |
| AquaEnv | Integrated Development Toolbox for Aquatic Chemical Model Generation |
| aquodom | Access to Aquo domaintables from R (Dutch) |
| AR | Another Look at the Acceptance-Rejection Method |
| ar.matrix | Simulate Auto Regressive Data from Precision Matricies |
| arabic2kansuji | Convert Arabic Numerals to Kansuji |
| arabicStemR | Arabic Stemmer for Text Analysis |
| arakno | ARAchnid KNowledge Online |
| ArArRedux | Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data |
| arc | Association Rule Classification |
| ARCensReg | Fitting Univariate Censored Linear Regression Model with Autoregressive Errors |
| ArchaeoChron | Bayesian Modeling of Archaeological Chronologies |
| ArchaeoPhases | Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal' |
| ArchaeoPhases.dataset | Data Sets for 'ArchaeoPhases' Vignettes |
| archdata | Example Datasets from Archaeological Research |
| archeofrag | Refitting and Spatial Analysis in Archaeology |
| archetypal | Finds the Archetypal Analysis of a Data Frame |
| archetyper | An Archetype for Data Mining and Data Science Projects |
| archetypes | Archetypal Analysis |
| aRchi | Quantitative Structural Model ('QSM') Treatment for Tree Architecture |
| archiDART | Plant Root System Architecture Analysis Using DART and RSML Files |
| archive | Multi-Format Archive and Compression Support |
| archiveRetriever | Retrieve Archived Web Pages from the 'Internet Archive' |
| archivist | Tools for Storing, Restoring and Searching for R Objects |
| archivist.github | Tools for Archiving, Managing and Sharing R Objects via GitHub |
| ArCo | Artificial Counterfactual Package |
| ARCokrig | Autoregressive Cokriging Models for Multifidelity Codes |
| arcpullr | Pull Data from an 'ArcGIS REST' API |
| arctools | Processing and Physical Activity Summaries of Minute Level Activity Data |
| ArDec | Time Series Autoregressive-Based Decomposition |
| ARDL | ARDL, ECM and Bounds-Test for Cointegration |
| areabiplot | Area Biplot |
| areal | Areal Weighted Interpolation |
| areaplot | Plot Stacked Areas and Confidence Bands as Filled Polygons |
| arena2r | Plots, Summary Statistics and Tools for Arena Simulation Users |
| arenar | Arena for the Exploration and Comparison of any ML Models |
| arfima | Fractional ARIMA (and Other Long Memory) Time Series Modeling |
| argo | Accurate Estimation of Influenza Epidemics using Google Search Data |
| argoFloats | Analysis of Oceanographic Argo Floats |
| argon2 | Secure Password Hashing |
| argonDash | Argon Shiny Dashboard Template |
| argonR | R Interface to Argon HTML Design |
| argparse | Command Line Optional and Positional Argument Parser |
| argparser | Command-Line Argument Parser |
| ARHT | Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data |
| ari | Automated R Instructor |
| ARIbrain | All-Resolution Inference |
| aricode | Efficient Computations of Standard Clustering Comparison Measures |
| arkdb | Archive and Unarchive Databases Using Flat Files |
| arkhe | Representation of Archaeological Data |
| arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |
| armada | A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence |
| armspp | Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' |
| arnie | "Arnie" box office records 1982-2014 |
| AROC | Covariate-Adjusted Receiver Operating Characteristic Curve Inference |
| aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |
| aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |
| aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |
| aroma.core | Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework |
| Arothron | Geometric Morphometric Methods and Virtual Anthropology Tools |
| ARPALData | Retrieving, Managing and Analysing Air Quality and Weather Data for Lombardy (Italy) using ARPA Lombardia Open Database |
| ARpLMEC | Censored Mixed-Effects Models with Different Correlation Structures |
| ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |
| arpr | Advanced R Pipes |
| aRpsDCA | Arps Decline Curve Analysis in R |
| arrangements | Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions |
| arrApply | Apply a Function to a Margin of an Array |
| arrayhelpers | Convenience Functions for Arrays |
| arrow | Integration to 'Apache' 'Arrow' |
| ars | Adaptive Rejection Sampling |
| arse | Area of Resilience to Stress Event |
| arsenal | An Arsenal of 'R' Functions for Large-Scale Statistical Summaries |
| ART | Aligned Rank Transform for Nonparametric Factorial Analysis |
| artfima | ARTFIMA Model Estimation |
| arthistory | Art History Textbook Data |
| ARTofR | To Insert Title, Divider, and Block of Comments |
| ARTool | Aligned Rank Transform |
| ARTP2 | Pathway and Gene-Level Association Test |
| aRtsy | Generative Art with 'ggplot2' |
| arules | Mining Association Rules and Frequent Itemsets |
| arulesCBA | Classification Based on Association Rules |
| arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |
| arulesSequences | Mining Frequent Sequences |
| arulesViz | Visualizing Association Rules and Frequent Itemsets |
| aRxiv | Interface to the arXiv API |
| asaur | Data Sets for "Applied Survival Analysis Using R"" |
| asbio | A Collection of Statistical Tools for Biologists |
| ascentTraining | Ascent Training Datasets |
| ascii | Export R Objects to Several Markup Languages |
| asciicast | Create 'Ascii' Screen Casts from R Scripts |
| asciichartr | Lightweight ASCII Line Graphs |
| asciiruler | Render an ASCII Ruler |
| asciiSetupReader | Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas) |
| ascotraceR | Simulate the Spread of Ascochyta Blight in Chickpea |
| asd | Simulations for Adaptive Seamless Designs |
| asdreader | Reading ASD Binary Files in R |
| ASGS.foyer | Interface to the Australian Statistical Geography Standard |
| ash | David Scott's ASH Routines |
| ashr | Methods for Adaptive Shrinkage, using Empirical Bayes |
| asht | Applied Statistical Hypothesis Tests |
| AsioHeaders | 'Asio' C++ Header Files |
| ASIP | Automated Satellite Image Processing |
| askpass | Safe Password Entry for R, Git, and SSH |
| aslib | Interface to the Algorithm Selection Benchmark Library |
| ASMap | Linkage Map Construction using the MSTmap Algorithm |
| asnipe | Animal Social Network Inference and Permutations for Ecologists |
| aSPC | An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors |
| aspect | A General Framework for Multivariate Analysis with Optimal Scaling |
| aspi | Analysis of Symmetry of Parasitic Infections |
| aspline | Spline Regression with Adaptive Knot Selection |
| aSPU | Adaptive Sum of Powered Score Test |
| asremlPlus | Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences |
| ASSA | Applied Singular Spectrum Analysis (ASSA) |
| assemblerr | Assembly of Pharmacometric Models |
| assert | Validate Function Arguments |
| assertable | Verbose Assertions for Tabular Data (Data.frames and Data.tables) |
| assertive | Readable Check Functions to Ensure Code Integrity |
| assertive.base | A Lightweight Core of the 'assertive' Package |
| assertive.code | Assertions to Check Properties of Code |
| assertive.data | Assertions to Check Properties of Data |
| assertive.data.uk | Assertions to Check Properties of Strings |
| assertive.data.us | Assertions to Check Properties of Strings |
| assertive.datetimes | Assertions to Check Properties of Dates and Times |
| assertive.files | Assertions to Check Properties of Files |
| assertive.matrices | Assertions to Check Properties of Matrices |
| assertive.models | Assertions to Check Properties of Models |
| assertive.numbers | Assertions to Check Properties of Numbers |
| assertive.properties | Assertions to Check Properties of Variables |
| assertive.reflection | Assertions for Checking the State of R |
| assertive.sets | Assertions to Check Properties of Sets |
| assertive.strings | Assertions to Check Properties of Strings |
| assertive.types | Assertions to Check Types of Variables |
| assertr | Assertive Programming for R Analysis Pipelines |
| assertthat | Easy Pre and Post Assertions |
| AssetAllocation | Backtesting Simple Asset Allocation Strategies |
| AssetCorr | Estimating Asset Correlations from Default Data |
| AssetPricing | Optimal Pricing of Assets with Fixed Expiry Date |
| assignPOP | Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework |
| assignR | Infer Geographic Origin from Isotopic Data |
| assist | A Suite of R Functions Implementing Spline Smoothing Techniques |
| ASSISTant | Adaptive Subgroup Selection in Group Sequential Trials |
| AssocAFC | Allele Frequency Comparison |
| assocInd | Implements New and Existing Association Indices for Constructing Animal Social Networks |
| AssocTests | Genetic Association Studies |
| assortnet | Calculate the Assortativity Coefficient of Weighted and Binary Networks |
| AST | Age-Spatial-Temporal Model |
| ast2ast | Translates a R Function into an External Pointer to a C++ Function |
| aster | Aster Models |
| aster2 | Aster Models |
| asteRisk | Computation of Satellite Position |
| AsthmaNHANES | Asthma Data Sets from NHANES |
| astrochron | A Computational Tool for Astrochronology |
| astrodatR | Astronomical Data |
| astroFns | Astronomy: Time and Position Functions, Misc. Utilities |
| astsa | Applied Statistical Time Series Analysis |
| ASV | Stochastic Volatility Models with or without Leverage |
| AsyK | Kernel Density Estimation |
| asylum | Data on Asylum and Resettlement for the UK |
| asymLD | Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data |
| AsymmetricSORDs | Asymmetric Second Order Rotatable Designs (AsymmetricSORDs) |
| asymmetry | Multidimensional Scaling of Asymmetric Proximities |
| asymmetry.measures | Asymmetry Measures for Probability Density Functions |
| asympTest | A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples |
| asymptor | Estimate Asymptomatic Cases via Capture/Recapture Methods |
| async | Asynchronous Code Constructs: Generators, Yield, Async, Await |
| AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |
| ata | Automated Test Assembly |
| atable | Create Tables for Reporting Clinical Trials |
| ATAforecasting | Automatic Time Series Analysis and Forecasting using the Ata Method |
| atakrig | Area-to-Area Kriging |
| ATbounds | Bounding Treatment Effects by Limited Information Pooling |
| atlas | Stanford 'ATLAS' Search Engine API |
| AtmChile | Download Air Quality and Meteorological Information of Chile |
| ATmet | Advanced Tools for Metrology |
| atmopt | Analysis-of-Marginal-Tail-Means |
| ATNr | Run Allometric Trophic Networks Models |
| atom4R | Tools to Handle and Publish Metadata as 'Atom' XML Format |
| ATR | Alternative Tree Representation |
| aTSA | Alternative Time Series Analysis |
| atsd | Support Querying Axibase Time-Series Database |
| attachment | Deal with Dependencies |
| attempt | Tools for Defensive Programming |
| attention | Self-Attention Algorithm |
| attenuation | Correcting for Attenuation Due to Measurement Error |
| attrib | Attributable Burden of Disease |
| AUC | Threshold Independent Performance Measures for Probabilistic Classifiers |
| auctestr | Statistical Testing for AUC Data |
| auctionr | Estimate First-Price Auction Model |
| audio | Audio Interface for R |
| audiometry | Standard Conform Pure Tone Audiometry (PTA) Plots |
| audit | Bounds for Accounting Populations |
| auditor | Model Audit - Verification, Validation, and Error Analysis |
| audrex | Automatic Dynamic Regression using Extreme Gradient Boosting |
| audubon | Japanese Text Processing Tools |
| augmentedRCBD | Analysis of Augmented Randomised Complete Block Designs |
| AugmenterR | Data Augmentation for Machine Learning on Tabular Data |
| augSIMEX | Analysis of Data with Mixed Measurement Error and Misclassification in Covariates |
| auk | eBird Data Extraction and Processing in R |
| aum | Area Under Minimum of False Positives and Negatives |
| AurieLSHGaussian | Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections |
| aurin | Access Datasets from the 'AURIN' API |
| auRoc | Various Methods to Estimate the AUC |
| ausplotsR | TERN AusPlots Analysis Package |
| AustralianPoliticians | Provides Datasets About Australian Politicians |
| AUtests | Approximate Unconditional and Permutation Tests |
| auth0 | Secure Authentication in Shiny with Auth0 |
| auto.pca | Automatic Variable Reduction Using Principal Component Analysis |
| autoBagging | Learning to Rank Bagging Workflows with Metalearning |
| autocart | Autocorrelation Regression Trees |
| autocogs | Automatic Cognostic Summaries |
| autoCovariateSelection | Automated Covariate Selection Using HDPS Algorithm |
| AutoDeskR | An Interface to the 'AutoDesk' 'API' Platform |
| autoencoder | Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data |
| autoFC | Automatic Construction of Forced-Choice Tests |
| autoFRK | Automatic Fixed Rank Kriging |
| autoharp | Semi-Automatic Grading of R and Rmd Scripts |
| autohd | High Dimensional Bayesian Survival Mediation Analysis |
| autohrf | Automated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis |
| autoimage | Multiple Heat Maps for Projected Coordinates |
| autokeras | R Interface to 'AutoKeras' |
| automagic | Automagically Document and Install Packages Necessary to Run R Code |
| automap | Automatic Interpolation Package |
| autoMFA | Algorithms for Automatically Fitting MFA Models |
| automl | Deep Learning with Metaheuristic |
| autoMrP | Improving MrP with Ensemble Learning |
| AutoPipe | Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis |
| autoplotly | Automatic Generation of Interactive Visualizations for Statistical Results |
| Autoplotprotein | Development of Visualization Tools for Protein Sequence |
| autoRasch | Semi-Automated Rasch Analysis |
| autoReg | Automatic Linear and Logistic Regression and Survival Analysis |
| AutoregressionMDE | Minimum Distance Estimation in Autoregressive Model |
| AutoScore | An Interpretable Machine Learning-Based Automatic Clinical Score Generator |
| Autoseed | Retrieve Disease-Related Genes from Public Sources |
| autoshiny | Automatic Transformation of an 'R' Function into a 'shiny' App |
| autostats | Auto Stats |
| AutoStepwiseGLM | Builds Stepwise GLMs via Train and Test Approach |
| autostsm | Automatic Structural Time Series Models |
| autothresholdr | An R Port of the 'ImageJ' Plugin 'Auto Threshold' |
| autoTS | Automatic Model Selection and Prediction for Univariate Time Series |
| av | Working with Audio and Video in R |
| available | Check if the Title of a Package is Available, Appropriate and Interesting |
| avar | Allan Variance |
| averisk | Calculation of Average Population Attributable Fractions and Confidence Intervals |
| AvInertia | Calculate the Inertial Properties of a Flying Bird |
| aVirtualTwins | Adaptation of Virtual Twins Method from Jared Foster |
| avocado | Weekly Hass Avocado Sales Summary |
| aweek | Convert Dates to Arbitrary Week Definitions |
| aweSOM | Interactive Self-Organizing Maps |
| AWR | 'AWS' Java 'SDK' for R |
| AWR.Athena | 'AWS' Athena 'DBI' Wrapper |
| AWR.Kinesis | Amazon 'Kinesis' Consumer Application for Stream Processing |
| AWR.KMS | A Simple Client to the 'AWS' Key Management Service |
| aws | Adaptive Weights Smoothing |
| aws.alexa | Client for the Amazon Alexa Web Information Services API |
| aws.comprehend | Client for 'AWS Comprehend' |
| aws.ec2metadata | Get EC2 Instance Metadata |
| aws.ecx | Communicating with AWS EC2 and ECS using AWS REST APIs |
| aws.iam | AWS IAM Client Package |
| aws.kms | 'AWS Key Management Service' Client Package |
| aws.lambda | AWS Lambda Client Package |
| aws.polly | Client for AWS Polly |
| aws.s3 | 'AWS S3' Client Package |
| aws.signature | Amazon Web Services Request Signatures |
| aws.transcribe | Client for 'AWS Transcribe' |
| aws.translate | Client for 'AWS Translate' |
| awsMethods | Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi' |
| AZIAD | Analyzing Zero-Inflated and Zero-Altered Data |
| aziztest | Novel Statistical Test for Aberration Enrichment |
| AzureAppInsights | Include Azure Application Insights in Shiny Apps |
| AzureAuth | Authentication Services for Azure Active Directory |
| AzureCognitive | Interface to Azure Cognitive Services |
| AzureContainers | Interface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure' |
| AzureCosmosR | Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service |
| AzureGraph | Simple Interface to 'Microsoft Graph' |
| AzureKeyVault | Key and Secret Management in 'Azure' |
| AzureKusto | Interface to 'Kusto'/'Azure Data Explorer' |
| azuremlsdk | Interface to the 'Azure Machine Learning' 'SDK' |
| AzureQstor | Interface to 'Azure Queue Storage' |
| AzureRMR | Interface to 'Azure Resource Manager' |
| AzureStor | Storage Management in 'Azure' |
| AzureTableStor | Interface to the Table Storage Service in 'Azure' |
| AzureVision | Interface to Azure Computer Vision Services |
| AzureVM | Virtual Machines in 'Azure' |
| AzureVMmetadata | Interface to Azure Virtual Machine Instance Metadata |
| babel | Ribosome Profiling Data Analysis |
| babelgene | Gene Orthologs for Model Organisms in a Tidy Data Format |
| babelwhale | Talking to 'Docker' and 'Singularity' Containers |
| babette | Control 'BEAST2' |
| babsim.hospital | Bartz & Bartz Simulation Hospital |
| babynames | US Baby Names 1880-2017 |
| BacArena | Modeling Framework for Cellular Communities in their Environments |
| BACCO | Bayesian Analysis of Computer Code Output (BACCO) |
| BACCT | Bayesian Augmented Control for Clinical Trials |
| bacistool | Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials |
| backbone | Extracts the Backbone from Graphs |
| backpipe | Backward Pipe (Right-to-Left) Operator |
| backports | Reimplementations of Functions Introduced Since R-3.0.0 |
| backShift | Learning Causal Cyclic Graphs from Unknown Shift Interventions |
| backtest | Exploring Portfolio-Based Conjectures About Financial Instruments |
| bacondecomp | Goodman-Bacon Decomposition |
| BACprior | Choice of Omega in the BAC Algorithm |
| bacr | Bayesian Adjustment for Confounding |
| badger | Badge for R Package |
| bagged.outliertrees | Robust Explainable Outlier Detection Based on OutlierTree |
| baggr | Bayesian Aggregate Treatment Effects |
| BAGofT | A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT) |
| baguette | Efficient Model Functions for Bagging |
| bahc | Filter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz |
| bain | Bayes Factors for Informative Hypotheses |
| BalanceCheck | Balance Check for Multiple Covariates in Matched Observational Studies |
| BalancedSampling | Balanced and Spatially Balanced Sampling |
| BALCONY | Better ALignment CONsensus analYsis |
| Ball | Statistical Inference and Sure Independence Screening via Ball Statistics |
| BALLI | Expression RNA-Seq Data Analysis Based on Linear Mixed Model |
| BallMapper | The Ball Mapper Algorithm |
| BaM | Functions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach" |
| bama | High Dimensional Bayesian Mediation Analysis |
| BAMBI | Bivariate Angular Mixture Models |
| bamboo | Protein Secondary Structure Prediction Using the Bamboo Method |
| bambooHR | A Wrapper to the 'BambooHR' API |
| bamdit | Bayesian Meta-Analysis of Diagnostic Test Data |
| bamlss | Bayesian Additive Models for Location, Scale, and Shape (and Beyond) |
| BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |
| bamp | Bayesian Age-Period-Cohort Modeling and Prediction |
| bandit | Functions for Simple a/B Split Test and Multi-Armed Bandit Analysis |
| bang | Bayesian Analysis, No Gibbs |
| bannerCommenter | Make Banner Comments with a Consistent Format |
| BANOVA | Hierarchical Bayesian ANOVA Models |
| banter | BioAcoustic eveNT classifiER |
| banxicoR | Download Data from the Bank of Mexico |
| bapred | Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data) |
| BaPreStoPro | Bayesian Prediction of Stochastic Processes |
| BarBorGradient | Function Minimum Approximator |
| barcode | Render Barcode Distribution Plots |
| baRcodeR | Label Creation for Tracking and Collecting Data from Biological Samples |
| BarcodingR | Species Identification using DNA Barcodes |
| bardr | Complete Works of William Shakespeare in Tidy Format |
| BARIS | Access and Import Data from the French Open Data Portal |
| Barnard | Barnard's Unconditional Test |
| barplot3d | Create 3D Barplots |
| BART | Bayesian Additive Regression Trees |
| bartBMA | Bayesian Additive Regression Trees using Bayesian Model Averaging |
| bartCause | Causal Inference using Bayesian Additive Regression Trees |
| bartcs | Bayesian Additive Regression Trees for Confounder Selection |
| bartMachine | Bayesian Additive Regression Trees |
| bartMachineJARs | bartMachine JARs |
| BartMixVs | Variable Selection Using Bayesian Additive Regression Trees |
| baRulho | Quantifying Habitat-Induced Acoustic Signal Degradation |
| Barycenter | Regularized Wasserstein Distances and Barycenters |
| BAS | Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling |
| basad | Bayesian Variable Selection with Shrinking and Diffusing Priors |
| base.rms | Convert Regression Between Base Function and 'rms' Package |
| base64 | Base64 Encoder and Decoder |
| base64enc | Tools for base64 encoding |
| base64url | Fast and URL-Safe Base64 Encoder and Decoder |
| baseballDBR | Sabermetrics and Advanced Baseball Statistics |
| baseballr | Acquiring and Analyzing Baseball Data |
| basecamb | Utilities for Streamlined Data Import, Imputation and Modelling |
| basedosdados | 'Base Dos Dados' R Client |
| basefun | Infrastructure for Computing with Basis Functions |
| baseline | Baseline Correction of Spectra |
| basemaps | Accessing Spatial Basemaps in R |
| BaseSet | Working with Sets the Tidy Way |
| basetheme | Themes for Base Graphics Plots |
| basf | Plot Simple Features with 'base' Sensibilities |
| basicMCMCplots | Trace Plots, Density Plots and Chain Comparisons for MCMC Samples |
| basicspace | Recovering a Basic Space from Issue Scales |
| basictabler | Construct Rich Tables for Output to 'HTML'/'Excel' |
| basifoR | Retrieval and Processing of the Spanish National Forest Inventory |
| BASiNET | Classification of RNA Sequences using Complex Network Theory |
| BASiNETEntropy | Classification of RNA Sequences using Complex Network and Information Theory |
| BaSkePro | Bayesian Model to Archaeological Faunal Skeletal Profiles |
| basket | Basket Trial Analysis |
| BasketballAnalyzeR | Analysis and Visualization of Basketball Data |
| baskexact | Exact Calculation of Basket Trial Operating Characteristics |
| BASS | Bayesian Adaptive Spline Surfaces |
| BaSTA | Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data |
| bastah | Big Data Statistical Analysis for High-Dimensional Models |
| BAT | Biodiversity Assessment Tools |
| batata | Managing Packages Removal and Installation |
| batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |
| BatchExperiments | Statistical Experiments on Batch Computing Clusters |
| BatchGetSymbols | Downloads and Organizes Financial Data for Multiple Tickers |
| BatchJobs | Batch Computing with R |
| batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |
| batchmix | Semi-Supervised Bayesian Mixture Models Incorporating Batch Correction |
| batchscr | Batch Script Helpers |
| batchtma | Batch Effect Adjustments |
| batchtools | Tools for Computation on Batch Systems |
| bate | Computes Bias-Adjusted Treatment Effect |
| batman | Convert Categorical Representations of Logicals to Actual Logicals |
| batteryreduction | An R Package for Data Reduction by Battery Reduction |
| BAwiR | Analysis of Basketball Data |
| baycn | Bayesian Inference for Causal Networks |
| bayefdr | Bayesian Estimation and Optimisation of Expected False Discovery Rate |
| bayes4psy | User Friendly Bayesian Data Analysis for Psychology |
| bayesAB | Fast Bayesian Methods for AB Testing |
| bayesammi | Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model |
| bayesanova | Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models |
| BayesARIMAX | Bayesian Estimation of ARIMAX Model |
| bayesassurance | Bayesian Assurance Computation |
| BayesBinMix | Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions |
| bayesbio | Miscellaneous Functions for Bioinformatics and Bayesian Statistics |
| bayesboot | An Implementation of Rubin's (1981) Bayesian Bootstrap |
| BayesBP | Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix |
| bayesbr | Beta Regression on a Bayesian Model |
| BayesCACE | Bayesian Model for CACE Analysis |
| BayesCombo | Bayesian Evidence Combination |
| BayesComm | Bayesian Community Ecology Analysis |
| bayescopulareg | Bayesian Copula Regression |
| bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |
| BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |
| bayesCT | Simulation and Analysis of Adaptive Bayesian Clinical Trials |
| BayesCTDesign | Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data |
| BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |
| bayesDccGarch | Methods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model |
| BayesDesign | Bayesian Single-Arm Design with Survival Endpoints |
| bayesdfa | Bayesian Dynamic Factor Analysis (DFA) with 'Stan' |
| bayesdistreg | Bayesian Distribution Regression |
| bayesDP | Implementation of the Bayesian Discount Prior Approach for Clinical Trials |
| BayesESS | Determining Effective Sample Size |
| BayesFactor | Computation of Bayes Factors for Common Designs |
| BayesFM | Bayesian Inference for Factor Modeling |
| bayesforecast | Bayesian Time Series Modeling with Stan |
| bayesGAM | Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo |
| bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |
| BayesGOF | Bayesian Modeling via Frequentist Goodness-of-Fit |
| BayesGPfit | Fast Bayesian Gaussian Process Regression Fitting |
| BayesGWQS | Bayesian Grouped Weighted Quantile Sum Regression |
| bayesian | Bindings for Bayesian TidyModels |
| bayesianETAS | Bayesian Estimation of the ETAS Model for Earthquake Occurrences |
| BayesianFROC | FROC Analysis by Bayesian Approaches |
| Bayesiangammareg | Bayesian Gamma Regression: Joint Mean and Shape Modeling |
| BayesianGLasso | Bayesian Graphical Lasso |
| BayesianLaterality | Predict Brain Asymmetry Based on Handedness and Dichotic Listening |
| BayesianNetwork | Bayesian Network Modeling and Analysis |
| BayesianPower | Sample Size and Power for Comparing Inequality Constrained Hypotheses |
| BayesianReasoning | Plot Positive and Negative Predictive Values for Medical Tests |
| BayesianTools | General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics |
| Bayesiantreg | Bayesian t Regression for Modeling Mean and Scale Parameters |
| bayesImageS | Bayesian Methods for Image Segmentation using a Potts Model |
| BayesLCA | Bayesian Latent Class Analysis |
| bayesLife | Bayesian Projection of Life Expectancy |
| bayeslincom | Linear Combinations of Bayesian Posterior Samples |
| bayeslm | Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors |
| BayesLN | Bayesian Inference for Log-Normal Data |
| BayesLogit | PolyaGamma Sampling |
| bayesloglin | Bayesian Analysis of Contingency Table Data |
| bayeslongitudinal | Adjust Longitudinal Regression Models Using Bayesian Methodology |
| bayesm | Bayesian Inference for Marketing/Micro-Econometrics |
| BayesMallows | Bayesian Preference Learning with the Mallows Rank Model |
| BayesMassBal | Bayesian Data Reconciliation of Separation Processes |
| bayesmeta | Bayesian Random-Effects Meta-Analysis and Meta-Regression |
| BayesMFSurv | Bayesian Misclassified-Failure Survival Model |
| bayesmix | Bayesian Mixture Models with JAGS |
| BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |
| bayesmove | Non-Parametric Bayesian Analyses of Animal Movement |
| BayesMRA | Bayesian Multi-Resolution Gaussian Process Approximations |
| BayesMultMeta | Bayesian Multivariate Meta-Analysis |
| bayesnec | A Bayesian No-Effect- Concentration (NEC) Algorithm |
| BayesNetBP | Bayesian Network Belief Propagation |
| BayesNSGP | Bayesian Analysis of Non-Stationary Gaussian Process Models |
| BayesOrdDesign | Bayesian Group Sequential Design for Ordinal Data |
| BayesPieceHazSelect | Variable Selection in a Hierarchical Bayesian Model for a Hazard Function |
| BayesPiecewiseICAR | Hierarchical Bayesian Model for a Hazard Function |
| bayesplay | The Bayes Factor Playground |
| bayesplot | Plotting for Bayesian Models |
| bayesPO | Bayesian Inference for Presence-Only Data |
| bayesPop | Probabilistic Population Projection |
| BayesPostEst | Generate Postestimation Quantities for Bayesian MCMC Estimation |
| BayesPPD | Bayesian Power Prior Design |
| BayesProject | Fast Projection Direction for Multivariate Changepoint Detection |
| bayesQR | Bayesian Quantile Regression |
| bayesreg | Bayesian Regression Models with Global-Local Shrinkage Priors |
| Bayesrel | Bayesian Reliability Estimation |
| BayesReversePLLH | Fits the Bayesian Piecewise Linear Log-Hazard Model |
| BayesRGMM | Bayesian Robust Generalized Mixed Models for Longitudinal Data |
| BayesRS | Bayes Factors for Hierarchical Linear Models with Continuous Predictors |
| bayesrules | Datasets and Supplemental Functions from Bayes Rules! Book |
| bayess | Bayesian Essentials with R |
| BayesS5 | Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5) |
| BayesSAE | Bayesian Analysis of Small Area Estimation |
| BayesSampling | Bayes Linear Estimators for Finite Population |
| BayesSenMC | Different Models of Posterior Distributions of Adjusted Odds Ratio |
| BayesSpec | Bayesian Spectral Analysis Techniques |
| BayesSPsurv | Bayesian Spatial Split Population Survival Model |
| BayesSummaryStatLM | MCMC Sampling of Bayesian Linear Models via Summary Statistics |
| BayesSUR | Bayesian Seemingly Unrelated Regression |
| bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |
| BayesSurvival | Bayesian Survival Analysis for Right Censored Data |
| bayest | Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models |
| bayestestR | Understand and Describe Bayesian Models and Posterior Distributions |
| bayesTFR | Bayesian Fertility Projection |
| BayesTools | Tools for Bayesian Analyses |
| BayesTree | Bayesian Additive Regression Trees |
| BayesTreePrior | Bayesian Tree Prior Simulation |
| BayesTwin | Bayesian Analysis of Item-Level Twin Data |
| BayesVarSel | Bayes Factors, Model Choice and Variable Selection in Linear Models |
| bayesvl | Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' |
| BayesX | R Utilities Accompanying the Software Package BayesX |
| BayesXsrc | R Package Distribution of the BayesX C++ Sources |
| bayesZIB | Bayesian Zero-Inflated Bernoulli Regression Model |
| bayfoxr | Global Bayesian Foraminifera Core Top Calibration |
| BayLum | Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating |
| bayMDS | Bayesian Multidimensional Scaling and Choice of Dimension |
| baymedr | Computation of Bayes Factors for Common Biomedical Designs |
| baystability | Bayesian Stability Analysis of Genotype by Environment Interaction (GEI) |
| BAYSTAR | On Bayesian Analysis of Threshold Autoregressive Models |
| baytrends | Long Term Water Quality Trend Analysis |
| bazar | Miscellaneous Basic Functions |
| BB | Solving and Optimizing Large-Scale Nonlinear Systems |
| BBcor | Bayesian Bootstrapping Correlations |
| bbdetection | Identification of Bull and Bear States of the Market |
| BBEST | Bayesian Estimation of Incoherent Neutron Scattering Backgrounds |
| BBI | Benthic Biotic Indices Calculation from Composition Data |
| bbknnR | Perform Batch Balanced KNN in R |
| bbl | Boltzmann Bayes Learner |
| BBmisc | Miscellaneous Helper Functions for B. Bischl |
| bbmle | Tools for General Maximum Likelihood Estimation |
| bbotk | Black-Box Optimization Toolkit |
| BBRecapture | Bayesian Behavioural Capture-Recapture Models |
| bbreg | Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data |
| bbricks | Bayesian Methods and Graphical Model Structures for Statistical Modeling |
| bbsBayes | Hierarchical Bayesian Analysis of North American BBS Data |
| BBSSL | Bayesian Bootstrap Spike-and-Slab LASSO |
| bbw | Blocked Weighted Bootstrap |
| bc3net | Gene Regulatory Network Inference with Bc3net |
| BCA1SG | Block Coordinate Ascent with One-Step Generalized Rosen Algorithm |
| bcaboot | Bias Corrected Bootstrap Confidence Intervals |
| BCBCSF | Bias-Corrected Bayesian Classification with Selected Features |
| BCC1997 | Calculation of Option Prices Based on a Universal Solution |
| bccp | Bias Correction under Censoring Plan |
| BCDAG | Bayesian Structure and Causal Learning of Gaussian Directed Graphs |
| bcdata | Search and Retrieve Data from the BC Data Catalogue |
| BCDating | Business Cycle Dating and Plotting Tools |
| BcDiag | Diagnostics Plots for Bicluster Data |
| BCE | Bayesian Composition Estimator: Estimating Sample (Taxonomic) Composition from Biomarker Data |
| BCEA | Bayesian Cost Effectiveness Analysis |
| BCEE | The Bayesian Causal Effect Estimation Algorithm |
| bcf | Causal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests |
| bcfrailph | Semiparametric Bivariate Correlated Frailty Model |
| bcfrailphdv | Bivariate Correlated Frailty Models with Varied Variances |
| bcgam | Bayesian Constrained Generalised Linear Models |
| BCgee | Bias-Corrected Estimates for Generalized Linear Models for Dependent Data |
| BCHM | Clinical Trial Calculation Based on BCHM Design |
| Bchron | Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling |
| BClustLonG | A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data |
| bcmaps | Map Layers and Spatial Utilities for British Columbia |
| bcmixed | Mixed Effect Model with the Box-Cox Transformation |
| bcp | Bayesian Analysis of Change Point Problems |
| bcpa | Behavioral Change Point Analysis of Animal Movement |
| bcputility | Wrapper for SQL Server bcp Utility |
| BCRA | Breast Cancer Risk Assessment |
| bcrm | Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials |
| bcROCsurface | Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests |
| bcrypt | 'Blowfish' Password Hashing Algorithm |
| BCSub | A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) |
| BCT | Bayesian Context Trees for Discrete Time Series |
| bcTSNE | Projected t-SNE for Batch Correction |
| bda | Binned Data Analysis |
| bdc | Biodiversity Data Cleaning |
| bdchecks | Biodiversity Data Checks |
| bdclean | A User-Friendly Biodiversity Data Cleaning App for the Inexperienced R User |
| bdDwC | Darwinizer: Darwin Core (DwC) Field Names Standardization |
| bde | Bounded Density Estimation |
| BDEsize | Efficient Determination of Sample Size in Balanced Design of Experiments |
| BDgraph | Bayesian Structure Learning in Graphical Models using Birth-Death MCMC |
| bdl | Interface and Tools for 'BDL' API |
| bdlp | Transparent and Reproducible Artificial Data Generation |
| bdots | Bootstrapped Differences of Time Series |
| BDP2 | Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint |
| bdpar | Big Data Preprocessing Architecture |
| bdpopt | Optimisation of Bayesian Decision Problems |
| bdpv | Inference and Design for Predictive Values in Diagnostic Tests |
| bdrc | Bayesian Discharge Rating Curves |
| bdribs | Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data |
| bdscale | Remove Weekends and Holidays from ggplot2 Axes |
| bdsmatrix | Routines for Block Diagonal Symmetric Matrices |
| bdvis | Biodiversity Data Visualizations |
| BDWreg | Bayesian Inference for Discrete Weibull Regression |
| BE | Bioequivalence Study Data Analysis |
| bea.R | Bureau of Economic Analysis API |
| BEACH | Biometric Exploratory Analysis Creation House |
| beadplexr | Analysis of Multiplex Cytometric Bead Assays |
| beakr | A Minimalist Web Framework for R |
| beam | Fast Bayesian Inference in Large Gaussian Graphical Models |
| beanplot | Visualization via Beanplots (Like Boxplot/Stripchart/Violin Plot) |
| beans | Data on Dried Beans |
| beanz | Bayesian Analysis of Heterogeneous Treatment Effect |
| beast | Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series |
| beastier | Call 'BEAST2' |
| BeastJar | JAR Dependency for MCMC Using 'BEAST' |
| beautier | 'BEAUti' from R |
| BED | Biological Entity Dictionary (BED) |
| BEDASSLE | Quantifies Effects of Geo/Eco Distance on Genetic Differentiation |
| BEDMatrix | Extract Genotypes from a PLINK .bed File |
| bedr | Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' |
| BeeGUTS | General Unified Threshold Model of Survival for Bees using Bayesian Inference |
| beepr | Easily Play Notification Sounds on any Platform |
| beeswarm | The Bee Swarm Plot, an Alternative to Stripchart |
| beezdemand | Behavioral Economic Easy Demand |
| befproj | Makes a Local Population Projection |
| beginr | Functions for R Beginners |
| behaviorchange | Tools for Behavior Change Researchers and Professionals |
| behavr | Canonical Data Structure for Behavioural Data |
| BEKKs | Multivariate Conditional Volatility Modelling and Forecasting |
| belex | Download Historical Data from the Belgrade Stock Exchange |
| belg | Boltzmann Entropy of a Landscape Gradient |
| bellreg | Count Regression Models Based on the Bell Distribution |
| bench | High Precision Timing of R Expressions |
| Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |
| benchmarkme | Crowd Sourced System Benchmarks |
| benchmarkmeData | Data Set for the 'benchmarkme' Package |
| benchr | High Precise Measurement of R Expressions Execution Time |
| bender | Bender Client |
| benford | Benford's Analysis on Large Data Sets |
| benford.analysis | Benford Analysis for Data Validation and Forensic Analytics |
| BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |
| BENMMI | Benthic Multi-Metric Index |
| bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |
| benthos | Marine Benthic Ecosystem Analysis |
| Bergm | Bayesian Exponential Random Graph Models |
| berryFunctions | Function Collection Related to Plotting and Hydrology |
| BeSS | Best Subset Selection in Linear, Logistic and CoxPH Models |
| Bessel | Computations and Approximations for Bessel Functions |
| BEST | Bayesian Estimation Supersedes the t-Test |
| bestglm | Best Subset GLM and Regression Utilities |
| Bestie | Bayesian Estimation of Intervention Effects |
| bestNormalize | Normalizing Transformation Functions |
| BESTree | Branch-Exclusive Splits Trees |
| bestridge | A Comprehensive R Package for Best Subset Selection |
| bestSDP | Burden Estimate of Common Communicable Diseases in Settlements of Displaced Populations |
| BET | Binary Expansion Testing |
| betaBayes | Bayesian Beta Regression |
| BetaBit | Mini Games from Adventures of Beta and Bit |
| betacal | Beta Calibration |
| betafunctions | Functions for Working with Two- And Four-Parameter Beta Probability Distributions |
| betalink | Beta-Diversity of Species Interactions |
| betapart | Partitioning Beta Diversity into Turnover and Nestedness Components |
| BetaPASS | Calculate Power and Sample Size with Beta Regression |
| betaper | Taxonomic Uncertainty on Multivariate Analyses of Ecological Data |
| betareg | Beta Regression |
| betategarch | Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models |
| bethel | Bethel's algorithm |
| BETS | Brazilian Economic Time Series |
| bets.covid19 | The BETS Model for Early Epidemic Data |
| bettermc | Enhanced Fork-Based Parallelization |
| BetterReg | Better Statistics for OLS and Binomial Logistic Regression |
| BeviMed | Bayesian Evaluation of Variant Involvement in Mendelian Disease |
| BeyondBenford | Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset |
| beyondWhittle | Bayesian Spectral Inference for Stationary Time Series |
| bezier | Toolkit for Bezier Curves and Splines |
| bfast | Breaks for Additive Season and Trend |
| bfp | Bayesian Fractional Polynomials |
| BFpack | Flexible Bayes Factor Testing of Scientific Expectations |
| bfsl | Best-Fit Straight Line |
| bfsMaps | Plot Maps from Switzerland by Swiss Federal Statistical Office |
| bfw | Bayesian Framework for Computational Modeling |
| BGData | A Suite of Packages for Analysis of Big Genomic Data |
| bgeva | Binary Generalized Extreme Value Additive Models |
| bggAnalytics | BoardGameGeek's Board Game Data Analysis Tools |
| BGGE | Bayesian Genomic Linear Models Applied to GE Genome Selection |
| BGGM | Bayesian Gaussian Graphical Models |
| bggum | Bayesian Estimation of Generalized Graded Unfolding Model Parameters |
| BGLR | Bayesian Generalized Linear Regression |
| bgmfiles | Example BGM Files for the Atlantis Ecosystem Model |
| BGmisc | Behavior Genetic Modeling Functions |
| bgmm | Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling |
| bgsmtr | Bayesian Group Sparse Multi-Task Regression |
| bgumbel | Bimodal Gumbel Distribution |
| BGVAR | Bayesian Global Vector Autoregressions |
| BH | Boost C++ Header Files |
| BHAI | Estimate the Burden of Healthcare-Associated Infections |
| Bhat | General Likelihood Exploration |
| BHH2 | Useful Functions for Box, Hunter and Hunter II |
| bhm | Biomarker Threshold Models |
| bhmbasket | Bayesian Hierarchical Models for Basket Trials |
| BHMSMAfMRI | Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data |
| bhpm | Bayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering |
| BHSBVAR | Structural Bayesian Vector Autoregression Models |
| BHTSpack | Bayesian Multi-Plate High-Throughput Screening of Compounds |
| BI | Blinding Assessment Indexes for Randomized, Controlled, Clinical Trials |
| BiasCorrector | A GUI to Correct Measurement Bias in DNA Methylation Analyses |
| BiasedUrn | Biased Urn Model Distributions |
| bib2df | Parse a BibTeX File to a Data Frame |
| BiBitR | R Wrapper for Java Implementation of BiBit |
| biblio | Interacting with BibTeX Databases |
| bibliometrix | Comprehensive Science Mapping Analysis |
| bibliometrixData | Bibliometrix Example Datasets |
| biblionetwork | Create Different Types of Bibliometric Networks |
| BibPlots | Plot Functions for Use in Bibliometrics |
| bibs | Bayesian Inference for the Birnbaum-Saunders Distribution |
| bibtex | Bibtex Parser |
| BiCausality | Binary Causality Inference Framework |
| biClassify | Binary Classification Using Extensions of Discriminant Analysis |
| biclique | Maximal Biclique Enumeration in Bipartite Graphs |
| biclust | BiCluster Algorithms |
| biclustermd | Biclustering with Missing Data |
| BICORN | Integrative Inference of De Novo Cis-Regulatory Modules |
| BiDAG | Bayesian Inference for Directed Acyclic Graphs |
| bidask | Efficient Estimation of Bid-Ask Spreads from Open, High, Low, and Close Prices |
| BiDimRegression | Calculates the Bidimensional Regression Between Two 2D Configurations |
| BIEN | Tools for Accessing the Botanical Information and Ecology Network Database |
| BifactorIndicesCalculator | Bifactor Indices Calculator |
| bife | Binary Choice Models with Fixed Effects |
| BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |
| bifurcatingr | Bifurcating Autoregressive Models |
| bigalgebra | 'BLAS' and 'LAPACK' Routines for Native R Matrices and 'big.matrix' Objects |
| biganalytics | Utilities for 'big.matrix' Objects from Package 'bigmemory' |
| bigassertr | Assertion and Message Functions |
| bigchess | Read, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines |
| bigdatadist | Distances for Machine Learning and Statistics in the Context of Big Data |
| BIGDAWG | Case-Control Analysis of Multi-Allelic Loci |
| bigdist | Store Distance Matrices on Disk |
| bigDM | Scalable Bayesian Disease Mapping Models for High-Dimensional Data |
| bigGP | Distributed Gaussian Process Calculations |
| BIGL | Biochemically Intuitive Generalized Loewe Model |
| biglasso | Extending Lasso Model Fitting to Big Data |
| bigleaf | Physical and Physiological Ecosystem Properties from Eddy Covariance Data |
| biglm | Bounded Memory Linear and Generalized Linear Models |
| biglmm | Bounded Memory Linear and Generalized Linear Models |
| bigMap | Big Data Mapping |
| bigmatch | Making Optimal Matching Size-Scalable Using Optimal Calipers |
| bigmds | Multidimensional Scaling for Big Data |
| bigmemory | Manage Massive Matrices with Shared Memory and Memory-Mapped Files |
| bigmemory.sri | A shared resource interface for Bigmemory Project packages |
| bignum | Arbitrary-Precision Integer and Floating-Point Mathematics |
| bigparallelr | Easy Parallel Tools |
| bigQF | Quadratic Forms in Large Matrices |
| bigQueryR | Interface with Google BigQuery with Shiny Compatibility |
| BigQuic | Big Quadratic Inverse Covariance Estimation |
| bigreadr | Read Large Text Files |
| bigReg | Generalized Linear Models (GLM) for Large Data Sets |
| bigrquery | An Interface to Google's 'BigQuery' 'API' |
| bigsimr | Fast Generation of High-Dimensional Random Vectors |
| bigsnpr | Analysis of Massive SNP Arrays |
| bigsparser | Sparse Matrix Format with Data on Disk |
| bigsplines | Smoothing Splines for Large Samples |
| bigstatsr | Statistical Tools for Filebacked Big Matrices |
| bigstep | Stepwise Selection for Large Data Sets |
| bigSurvSGD | Big Survival Analysis Using Stochastic Gradient Descent |
| bigtabulate | Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects |
| bigtcr | Nonparametric Analysis of Bivariate Gap Time with Competing Risks |
| bigtime | Sparse Estimation of Large Time Series Models |
| bigutilsr | Utility Functions for Large-scale Data |
| BigVAR | Dimension Reduction Methods for Multivariate Time Series |
| bikeshare14 | Bay Area Bike Share Trips in 2014 |
| bikm1 | Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets |
| bild | A Package for BInary Longitudinal Data |
| billboard | Contains Data of Billboard Hot 100 Songs |
| billboarder | Create Interactive Chart with the JavaScript 'Billboard' Library |
| bimets | Time Series and Econometric Modeling |
| BimodalIndex | The Bimodality Index |
| binancer | API Client to 'Binance' |
| Binarize | Binarization of One-Dimensional Data |
| BinarybalancedCut | Threshold Cut Point of Probability for a Binary Classifier Model |
| BinaryDosage | Creates, Merges, and Reads Binary Dosage Files |
| BinaryEMVS | Variable Selection for Binary Data Using the EM Algorithm |
| BinaryEPPM | Mean and Variance Modeling of Binary Data |
| binaryGP | Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response |
| binaryTimeSeries | Analyzes a Binary Variable During a Time Series |
| binb | 'binb' is not 'Beamer' |
| BINCOR | Estimate the Correlation Between Two Irregular Time Series |
| binda | Multi-Class Discriminant Analysis using Binary Predictors |
| bindata | Generation of Artificial Binary Data |
| bindr | Parametrized Active Bindings |
| bindrcpp | An 'Rcpp' Interface to Active Bindings |
| binequality | Methods for Analyzing Binned Income Data |
| binford | Binford's Hunter-Gatherer Data |
| bingat | Binary Graph Analysis Tools |
| binGroup | Evaluation and Experimental Design for Binomial Group Testing |
| binGroup2 | Identification and Estimation using Group Testing |
| BinGSD | Calculation for Single Arm Group Sequential Test with Binary Endpoint |
| binhf | Haar-Fisz Functions for Binomial Data |
| binman | A Binary Download Manager |
| BinMat | Processes Binary Data Obtained from Fragment Analysis (Such as AFLPs, ISSRs, and RFLPs) |
| binMto | Many-to-One Comparisons of Proportions |
| BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |
| BinNor | Simultaneous Generation of Multivariate Binary and Normal Variates |
| binom | Binomial Confidence Intervals for Several Parameterizations |
| binomialRF | Binomial Random Forest Feature Selection |
| binomSamSize | Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling |
| BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |
| binovisualfields | Depth-Dependent Binocular Visual Fields Simulation |
| binr | Cut Numeric Values into Evenly Distributed Groups |
| BinSegBstrap | Piecewise Smooth Regression by Bootstrapped Binary Segmentation |
| binsegRcpp | Efficient Implementation of Binary Segmentation |
| binseqtest | Exact Binary Sequential Designs and Analysis |
| binsmooth | Generate PDFs and CDFs from Binned Data |
| binsreg | Binscatter Estimation and Inference |
| binst | Data Preprocessing, Binning for Classification and Regression |
| BINtools | Bayesian BIN (Bias, Information, Noise) Model of Forecasting |
| bio.infer | Predict Environmental Conditions from Biological Observations |
| bio3d | Biological Structure Analysis |
| bioacoustics | Analyse Audio Recordings and Automatically Extract Animal Vocalizations |
| bioassays | Summarising Multi Well Plate Cellular Assay |
| bioC.logs | BioConductor Package Downloads Stats |
| BioCircos | Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js' |
| bioclim | Bioclimatic Analysis and Classification |
| BiocManager | Access the Bioconductor Project Package Repository |
| Biocomb | Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis |
| biocompute | Create and Manipulate BioCompute Objects |
| Biodem | Biodemography Functions |
| BiodiversityR | Package for Community Ecology and Suitability Analysis |
| biodosetools | An R Shiny Application for Biological Dosimetry |
| BIOdry | Multilevel Modeling of Dendroclimatical Fluctuations |
| BioFTF | Biodiversity Assessment Using Functional Tools |
| biogas | Process Biogas Data and Predict Biogas Production |
| biogeo | Point Data Quality Assessment and Coordinate Conversion |
| biogeom | Biological Geometries |
| biogram | N-Gram Analysis of Biological Sequences |
| biogrowth | Modelling of Population Growth |
| Bioi | Biological Image Analysis |
| bioimagetools | Tools for Microscopy Imaging |
| bioinactivation | Mathematical Modelling of (Dynamic) Microbial Inactivation |
| BioInsight | Filter and Plot RNA Biotypes |
| biokNN | Bi-Objective k-Nearest Neighbors Imputation for Multilevel Data |
| biolink | Create Hyperlinks to Biological Databases and Resources |
| Biolinv | Modelling and Forecasting Biological Invasions |
| BioMark | Find Biomarkers in Two-Class Discrimination Problems |
| biomartr | Genomic Data Retrieval |
| BIOMASS | Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests |
| biometryassist | Functions to Assist Design and Analysis of Agronomic Experiments |
| biomod2 | Ensemble Platform for Species Distribution Modeling |
| bioOED | Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation |
| Biopeak | Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data |
| BioPET | Biomarker Prognostic Enrichment Tool |
| BioPETsurv | Biomarker Prognostic Enrichment Tool for Time-to-Event Trial |
| bioPN | Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets |
| BioProbability | Probability in Biostatistics |
| bioRad | Biological Analysis and Visualization of Weather Radar Data |
| BioRssay | Analyze Bioassays and Probit Graphs |
| Bios2cor | From Biological Sequences and Simulations to Correlation Analysis |
| bios2mds | From Biological Sequences to Multidimensional Scaling |
| biosensors.usc | Distributional Data Analysis Techniques for Biosensor Data |
| bioseq | A Toolbox for Manipulating Biological Sequences |
| biosignalEMG | Tools for Electromyogram Signals (EMG) Analysis |
| biospear | Biomarker Selection in Penalized Regression Models |
| biostat3 | Utility Functions, Datasets and Extended Examples for Survival Analysis |
| Biostatistics | Statistics Tutorials for Biologists |
| BioStatR | Initiation à La Statistique Avec R |
| biosurvey | Tools for Biological Survey Planning |
| biotic | Calculation of Freshwater Biotic Indices |
| biotools | Tools for Biometry and Applied Statistics in Agricultural Science |
| BioVenn | Create Area-Proportional Venn Diagrams from Biological Lists |
| bipartite | Visualising Bipartite Networks and Calculating Some (Ecological) Indices |
| bipartiteD3 | Interactive Bipartite Graphs |
| BipartiteModularityMaximization | Partition Bipartite Network into Non-Overlapping Biclusters by Optimizing Bipartite Modularity |
| bipd | Bayesian Individual Patient Data Meta-Analysis using 'JAGS' |
| biplotbootGUI | Bootstrap on Classical Biplots and Clustering Disjoint Biplot |
| BiplotGUI | Interactive Biplots in R |
| BiplotML | Biplots Estimation with Algorithms ML |
| BiProbitPartial | Bivariate Probit with Partial Observability |
| birankr | Ranking Nodes in Bipartite and Weighted Networks |
| birdring | Methods to Analyse Ring Re-Encounter Data |
| birk | MA Birk's Functions |
| birtr | The R Package for "The Basics of Item Response Theory Using R" |
| biscale | Tools and Palettes for Bivariate Thematic Mapping |
| BISdata | Download Data from the Bank for International Settlements (BIS) |
| bisectr | Tools to find bad commits with git bisect |
| BiSEp | Toolkit to Identify Candidate Synthetic Lethality |
| bisque | Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models |
| BisqueRNA | Decomposition of Bulk Expression with Single-Cell Sequencing |
| BisRNA | Analysis of RNA Cytosine-5 Methylation |
| bistablehistory | Cumulative History Analysis for Bistable Perception Time Series |
| bit | Classes and Methods for Fast Memory-Efficient Boolean Selections |
| bit64 | A S3 Class for Vectors of 64bit Integers |
| bite | Bayesian Integrative Models of Trait Evolution |
| bitmexr | R Client for BitMEX |
| bitops | Bitwise Operations |
| BiTrinA | Binarization and Trinarization of One-Dimensional Data |
| bitsqueezr | Quantize Floating-Point Numbers for Improved Compressibility |
| bittermelon | Monochrome Bitmap Font Tools |
| Bivariate.Pareto | Bivariate Pareto Models |
| bivariatemaps | Creates Bivariate Maps |
| BivGeo | Basu-Dhar Bivariate Geometric Distribution |
| bivgeom | Roy's Bivariate Geometric Distribution |
| BivRec | Bivariate Alternating Recurrent Event Data Analysis |
| BivRegBLS | Tolerance Interval and EIV Regression - Method Comparison Studies |
| bivrp | Bivariate Residual Plots with Simulation Polygons |
| BivUnifBin | Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data |
| biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |
| biwt | Compute the Biweight Mean Vector and Covariance & Correlation Matrice |
| bizdays | Business Days Calculations and Utilities |
| bizicount | Bivariate Zero-Inflated Count Models Using Copulas |
| bjscrapeR | An API Wrapper for the Bureau of Justice Statistics (BJS) |
| bkmr | Bayesian Kernel Machine Regression |
| bkmrhat | Parallel Chain Tools for Bayesian Kernel Machine Regression |
| blackbox | Black Box Optimization and Exploration of Parameter Space |
| BlackCarbon | Processing Raw Black Carbon Concentration |
| blaise | Read and Write FWF Files in the 'Blaise' Format |
| BlakerCI | Blaker's Binomial and Poisson Confidence Limits |
| BlandAltmanLeh | Plots (Slightly Extended) Bland-Altman Plots |
| blandr | Bland-Altman Method Comparison |
| BlanketStatsments | Build and Compare Statistical Models |
| blapsr | Bayesian Inference with Laplace Approximations and P-Splines |
| blaster | Native R Implementation of an Efficient BLAST-Like Algorithm |
| blastula | Easily Send HTML Email Messages |
| blatent | Bayesian Latent Variable Models |
| blatr | Send Emails Using 'Blat' for Windows |
| blavaan | Bayesian Latent Variable Analysis |
| BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |
| blendedLink | A New Link Function that Blends Two Specified Link Functions |
| blender | Analyze biotic homogenization of landscapes |
| Blendstat | Joint Analysis of Experiments with Mixtures and Random Effects |
| blindrecalc | Blinded Sample Size Recalculation |
| blink | Record Linkage for Empirically Motivated Priors |
| bliss | Bayesian Functional Linear Regression with Sparse Step Functions |
| blme | Bayesian Linear Mixed-Effects Models |
| blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |
| BLModel | Black-Litterman Posterior Distribution |
| blob | A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS') |
| BlockCov | Estimation of Large Block Covariance Matrices |
| blockcpd | Change Point Detection for Multiple Aligned Independent Time Series |
| blockCV | Spatial and Environmental Blocking for K-Fold Cross-Validation |
| blockForest | Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data |
| blocklength | Select an Optimal Block-Length to Bootstrap Dependent Data (Block Bootstrap) |
| blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |
| blockmodeling | Generalized and Classical Blockmodeling of Valued Networks |
| BlockmodelingGUI | GUI for the Generalised Blockmodeling of Valued Networks |
| blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |
| blockrand | Randomization for Block Random Clinical Trials |
| blocksdesign | Nested and Crossed Block Designs for Factorial and Unstructured Treatment Sets |
| blogdown | Create Blogs and Websites with R Markdown |
| BLOQ | Impute and Analyze Data with BLOQ Observations |
| blorr | Tools for Developing Binary Logistic Regression Models |
| BLPestimatoR | Performs a BLP Demand Estimation |
| BLR | Bayesian Linear Regression |
| blrm | Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling |
| BLRPM | Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model |
| BLRShiny | Interactive Document for Working with Binary Logistic Regression Analysis |
| BLRShiny2 | Interactive Document for Working with Binary Logistic Regression Analysis |
| BLSM | Bayesian Latent Space Model |
| blsR | Make Requests from the Bureau of Labor Statistics API |
| bltm | Bayesian Latent Threshold Modeling |
| bluebike | Blue Bike Comprehensive Data |
| BlythStillCasellaCI | Blyth-Still-Casella Exact Binomial Confidence Intervals |
| BMA | Bayesian Model Averaging |
| bmabasket | Bayesian Model Averaging for Basket Trials |
| BMAmevt | Multivariate Extremes: Bayesian Estimation of the Spectral Measure |
| bmass | Bayesian Multivariate Analysis of Summary Statistics |
| bmem | Mediation Analysis with Missing Data Using Bootstrap |
| bmemLavaan | Mediation Analysis with Missing Data and Non-Normal Data |
| bmgarch | Bayesian Multivariate GARCH Models |
| bmggum | Bayesian Multidimensional Generalized Graded Unfolding Model |
| BMisc | Miscellaneous Functions for Panel Data, Quantiles, and Printing Results |
| Bmix | Bayesian Sampling for Stick-Breaking Mixtures |
| bmixture | Bayesian Estimation for Finite Mixture of Distributions |
| bmlm | Bayesian Multilevel Mediation |
| bmotif | Motif Analyses of Bipartite Networks |
| bmp | Read Windows Bitmap (BMP) Images |
| BMRBr | 'BMRB' File Downloader |
| bmrm | Bundle Methods for Regularized Risk Minimization Package |
| BMRMM | An Implementation of the Bayesian Markov (Renewal) Mixed Models |
| BMRSr | Wrapper Functions to the 'BMRS API' |
| BMRV | Bayesian Models for Rare Variant Association Analysis |
| BMS | Bayesian Model Averaging Library |
| bmscstan | Bayesian Multilevel Single Case Models using 'Stan' |
| bmstdr | Bayesian Modeling of Spatio-Temporal Data with R |
| BMT | The BMT Distribution |
| BMTAR | Bayesian Approach for MTAR Models with Missing Data |
| BMTME | Bayesian Multi-Trait Multi-Environment for Genomic Selection Analysis |
| bnclassify | Learning Discrete Bayesian Network Classifiers from Data |
| bnClustOmics | Bayesian Network-Based Clustering of Multi-Omics Data |
| bndovb | Bounding Omitted Variable Bias Using Auxiliary Data |
| bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |
| bnma | Bayesian Network Meta-Analysis using 'JAGS' |
| bnmonitor | An Implementation of Sensitivity Analysis in Bayesian Networks |
| bnnSurvival | Bagged k-Nearest Neighbors Survival Prediction |
| bnpa | Bayesian Networks & Path Analysis |
| BNPdensity | Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures |
| BNPmix | Bayesian Nonparametric Mixture Models |
| BNPMIXcluster | Bayesian Nonparametric Model for Clustering with Mixed Scale Variables |
| bnpsd | Simulate Genotypes from the BN-PSD Admixture Model |
| BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |
| BNrich | Pathway Enrichment Analysis Based on Bayesian Network |
| BNSL | Bayesian Network Structure Learning |
| BNSP | Bayesian Non- And Semi-Parametric Model Fitting |
| bnspatial | Spatial Implementation of Bayesian Networks and Mapping |
| bnstruct | Bayesian Network Structure Learning from Data with Missing Values |
| bnviewer | Bayesian Networks Interactive Visualization and Explainable Artificial Intelligence |
| boa | Bayesian Output Analysis Program (BOA) for MCMC |
| BoardGames | Board Games and Tools for Building Board Games |
| bodenmiller | Profiling of Peripheral Blood Mononuclear Cells using CyTOF |
| Bodi | Boosting Diversity in Regression Ensembles |
| bodycomp | Percent Body Fat Values Using Anthropometric Prediction Equations |
| boilerpipeR | Interface to the Boilerpipe Java Library |
| BOIN | Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials |
| BOJ | Interface to Bank of Japan Statistics |
| bolasso | Model Consistent Lasso Estimation Through the Bootstrap |
| bold | Interface to Bold Systems API |
| Bolstad | Functions for Elementary Bayesian Inference |
| Bolstad2 | Bolstad Functions |
| BoltzMM | Boltzmann Machines with MM Algorithms |
| bondAnalyst | Methods for Fixed-Income Valuation, Risk and Return |
| BondValuation | Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions |
| BoneProfileR | Tools to Study Bone Compactness |
| BonEV | An Improved Multiple Testing Procedure for Controlling False Discovery Rates |
| bonsai | Model Wrappers for Tree-Based Models |
| bookdown | Authoring Books and Technical Documents with R Markdown |
| bookdownplus | Generate Assorted Books and Documents with R 'bookdown' Package |
| BoolFilter | Optimal Estimation of Partially Observed Boolean Dynamical Systems |
| BoolNet | Construction, Simulation and Analysis of Boolean Networks |
| Boom | Bayesian Object Oriented Modeling |
| boomer | Debugging Tools to Inspect the Intermediate Steps of a Call |
| BoomSpikeSlab | MCMC for Spike and Slab Regression |
| BoostMLR | Boosting for Multivariate Longitudinal Responses |
| boostmtree | Boosted Multivariate Trees for Longitudinal Data |
| boot | Bootstrap Functions (Originally by Angelo Canty for S) |
| boot.heterogeneity | A Bootstrap-Based Heterogeneity Test for Meta-Analysis |
| boot.pval | Bootstrap p-Values |
| bootcluster | Bootstrapping Estimates of Clustering Stability |
| bootComb | Combine Parameter Estimates via Parametric Bootstrap |
| bootCT | Bootstrapping the ARDL Tests for Cointegration |
| bootES | Bootstrap Confidence Intervals on Effect Sizes |
| bootf2 | Simulation and Comparison of Dissolution Profiles |
| bootGOF | Bootstrap Based Goodness-of-Fit Tests |
| bootImpute | Bootstrap Inference for Multiple Imputation |
| bootLR | Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests |
| BootMRMR | Bootstrap-MRMR Technique for Informative Gene Selection |
| bootnet | Bootstrap Methods for Various Network Estimation Routines |
| bootPLS | Bootstrap Hyperparameter Selection for PLS Models and Extensions |
| BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |
| bootruin | A Bootstrap Test for the Probability of Ruin in the Classical Risk Process |
| bootStepAIC | Bootstrap stepAIC |
| bootstrap | Functions for the Book "An Introduction to the Bootstrap" |
| bootstrapFP | Bootstrap Algorithms for Finite Population Inference |
| BootstrapQTL | Bootstrap cis-QTL Method that Corrects for the Winner's Curse |
| bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |
| bootUR | Bootstrap Unit Root Tests |
| BootWPTOS | Test Stationarity using Bootstrap Wavelet Packet Tests |
| Boptbd | Bayesian Optimal Block Designs |
| bor | Transforming Behavioral Observation Records into Data Matrices |
| boral | Bayesian Ordination and Regression AnaLysis |
| borrowr | Estimate Causal Effects with Borrowing Between Data Sources |
| Boruta | Wrapper Algorithm for All Relevant Feature Selection |
| BOSO | Bilevel Optimization Selector Operator |
| BosonSampling | Classical Boson Sampling |
| BoSSA | A Bunch of Structure and Sequence Analysis |
| BOSSreg | Best Orthogonalized Subset Selection (BOSS) |
| botor | 'AWS Python SDK' ('boto3') for R |
| boundingbox | Create a Bounding Box in an Image |
| boutliers | Outlier Detection and Influence Diagnostics for Meta-Analysis |
| BoutrosLab.plotting.general | Functions to Create Publication-Quality Plots |
| box | Write Reusable, Composable and Modular R Code |
| boxplotdbl | Double Box Plot for Two-Axes Correlation |
| boxr | Interface for the 'Box.com API' |
| bp | Blood Pressure Analysis in R |
| bpa | Basic Pattern Analysis |
| bpAcc | Blood Pressure Device Accuracy Evaluation: Statistical Considerations |
| bpbounds | Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions |
| bpca | Biplot of Multivariate Data Based on Principal Components Analysis |
| bpcp | Beta Product Confidence Procedure for Right Censored Data |
| bpcs | Bayesian Paired Comparison Analysis with Stan |
| bpDir | Boxplots for Directional Data |
| BPEC | Bayesian Phylogeographic and Ecological Clustering |
| bpgmm | Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models |
| BPM | Bayesian Purity Model to Estimate Tumor Purity |
| bpnreg | Bayesian Projected Normal Regression Models for Circular Data |
| bpp | Computations Around Bayesian Predictive Power |
| bpr | Fitting Bayesian Poisson Regression |
| bqror | Bayesian Quantile Regression for Ordinal Models |
| bqtl | Bayesian QTL Mapping Toolkit |
| bRacatus | A Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data |
| bracer | Brace Expansions |
| BRACoD.R | BRACoD: Bayesian Regression Analysis of Compositional Data |
| BradleyTerry2 | Bradley-Terry Models |
| braggR | Calculate the Revealed Aggregator of Probability Predictions |
| braidReports | Visualize Combined Action Response Surfaces and Report BRAID Analyses |
| braidrm | Fitting Dose Response with the BRAID Combined Action Model |
| BrailleR | Improved Access for Blind Users |
| BrainCon | Inference the Partial Correlations Based on Time Series Data |
| brainGraph | Graph Theory Analysis of Brain MRI Data |
| brainKCCA | Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis |
| brainR | Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging |
| BranchGLM | Efficient Branch and Bound Variable Selection for GLMs using 'RcppArmadillo' |
| Branching | Simulation and Estimation for Branching Processes |
| brandwatchR | 'Brandwatch' API to R |
| brant | Test for Parallel Regression Assumption |
| braQCA | Bootstrapped Robustness Assessment for Qualitative Comparative Analysis |
| brassica | 1970s BASIC Interpreter |
| bravo | Bayesian Screening and Variable Selection |
| BrazilMet | Download and Processing of Automatic Weather Stations (AWS) Data of INMET-Brazil |
| BRDT | Binomial Reliability Demonstration Tests |
| brea | Bayesian Recurrent Event Analysis |
| bread | Analyze Big Files Without Loading Them in Memory |
| breakaway | Species Richness Estimation and Modeling |
| breakDown | Model Agnostic Explainers for Individual Predictions |
| breakfast | Methods for Fast Multiple Change-Point Detection and Estimation |
| breakpoint | An R Package for Multiple Break-Point Detection via the Cross-Entropy Method |
| BreakPoints | Identify Breakpoints in Series of Data |
| breathtestcore | Core Functions to Read and Fit 13c Time Series from Breath Tests |
| breathteststan | Stan-Based Fit to Gastric Emptying Curves |
| bReeze | Functions for Wind Resource Assessment |
| BRETIGEA | Brain Cell Type Specific Gene Expression Analysis |
| brew | Templating Framework for Report Generation |
| brglm | Bias Reduction in Binomial-Response Generalized Linear Models |
| brglm2 | Bias Reduction in Generalized Linear Models |
| bridgedist | An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) |
| bridger | Bridge Hand Generator with Criteria Selector |
| bridger2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data |
| bridgesampling | Bridge Sampling for Marginal Likelihoods and Bayes Factors |
| briKmeans | Package for Brik, Fabrik and Fdebrik Algorithms to Initialise Kmeans |
| BRINDA | Computation of BRINDA Adjusted Micronutrient Biomarkers for Inflammation |
| brinton | A Graphical EDA Tool |
| brio | Basic R Input Output |
| briqr | Interface to the 'Briq' API |
| BRISC | Fast Inference for Large Spatial Datasets using BRISC |
| briskaR | Biological Risk Assessment |
| BRL | Beta Record Linkage |
| brlrmr | Bias Reduction with Missing Binary Response |
| brm | Binary Regression Model |
| brms | Bayesian Regression Models using 'Stan' |
| brmsmargins | Bayesian Marginal Effects for 'brms' Models |
| brnn | Bayesian Regularization for Feed-Forward Neural Networks |
| Brobdingnag | Very Large Numbers in R |
| brokenstick | Broken Stick Model for Irregular Longitudinal Data |
| brolgar | Browse Over Longitudinal Data Graphically and Analytically in R |
| broman | Karl Broman's R Code |
| broom | Convert Statistical Objects into Tidy Tibbles |
| broom.helpers | Helpers for Model Coefficients Tibbles |
| broom.mixed | Tidying Methods for Mixed Models |
| brotli | A Compression Format Optimized for the Web |
| BrownDog | Brown Dog R Interface |
| brpop | Brazilian Population Estimatives |
| Brq | Bayesian Analysis of Quantile Regression Models |
| brr | Bayesian Inference on the Ratio of Two Poisson Rates |
| brranching | Fetch 'Phylogenies' from Many Sources |
| bruceR | Broadly Useful Convenient and Efficient R Functions |
| BRugs | Interface to the 'OpenBUGS' MCMC Software |
| brulee | High-Level Modeling Functions with 'torch' |
| Brundle | Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data |
| brunnermunzel | (Permuted) Brunner-Munzel Test |
| brxx | Bayesian Test Reliability Estimation |
| bs4cards | Generate Bootstrap Cards |
| bs4Dash | A 'Bootstrap 4' Version of 'shinydashboard' |
| BSagri | Safety Assessment in Agricultural Field Trials |
| bsam | Bayesian State-Space Models for Animal Movement |
| bsamGP | Bayesian Spectral Analysis Models using Gaussian Process Priors |
| BSBT | The Bayesian Spatial Bradley–Terry Model |
| BSDA | Basic Statistics and Data Analysis |
| bsearchtools | Binary Search Tools |
| BSGW | Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression |
| bshazard | Nonparametric Smoothing of the Hazard Function |
| bSims | Bird Point Count Simulator |
| BSL | Bayesian Synthetic Likelihood |
| bslib | Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown' |
| BsMD | Bayes Screening and Model Discrimination |
| bsnsing | Build Decision Trees with Optimal Multivariate Splits |
| BSPADATA | Bayesian Proposal to Fit Spatial Econometric Models |
| bspec | Bayesian Spectral Inference |
| bspline | B-Spline Interpolation and Regression |
| bsplinePsd | Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors |
| bsplus | Adds Functionality to the R Markdown + Shiny Bootstrap Framework |
| bspm | Bridge to System Package Manager |
| bspmma | Bayesian Semiparametric Models for Meta-Analysis |
| bsreg | Bayesian Spatial Regression Models |
| BSS | Brownian Semistationary Processes |
| BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |
| bssm | Bayesian Inference of Non-Linear and Non-Gaussian State Space Models |
| bssn | Birnbaum-Saunders Model |
| BSSprep | Whitening Data as Preparation for Blind Source Separation |
| bst | Gradient Boosting |
| bsTools | Create HTML Content with Bootstrap 5 Classes and Layouts |
| bsts | Bayesian Structural Time Series |
| bsub | Submitter and Monitor of the 'LSF Cluster' |
| BSW | Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm |
| btb | Beyond the Border - Kernel Density Estimation for Urban Geography |
| BTdecayLasso | Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso |
| btergm | Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood |
| BTLLasso | Modelling Heterogeneity in Paired Comparison Data |
| BTM | Biterm Topic Models for Short Text |
| BTSPAS | Bayesian Time-Stratified Population Analysis |
| BTYD | Implementing BTYD Models with the Log Sum Exp Patch |
| BTYDplus | Probabilistic Models for Assessing and Predicting your Customer Base |
| bubblyr | Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds |
| bucky | Bucky's Archive for Data Analysis in the Social Sciences |
| BUCSS | Bias and Uncertainty Corrected Sample Size |
| Buddle | A Deep Learning for Statistical Classification and Regression Analysis with Random Effects |
| buffeRs | Buffer Generation for Spatial Models |
| buildmer | Stepwise Elimination and Term Reordering for Mixed-Effects Regression |
| buildr | Organize & Run Build Scripts Comfortably |
| BuildSys | System for Building and Debugging C/C++ Dynamic Libraries |
| bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |
| bulkAnalyseR | Interactive Shiny App for Bulk Sequencing Data |
| bulletcp | Automatic Groove Identification via Bayesian Changepoint Detection |
| bulletr | Algorithms for Matching Bullet Lands |
| bullwhipgame | Bullwhip Effect Demo in Shiny |
| bumbl | Tools for Modeling Bumblebee Colony Growth and Decline |
| bumblebee | Quantify Disease Transmission Within and Between Population Groups |
| bunching | Estimate Bunching |
| bunchr | Analyze Bunching in a Kink or Notch Setting |
| bundesbank | Download Data from Bundesbank |
| bundesligR | All Final Tables of the Bundesliga |
| bupaR | Business Process Analysis in R |
| burnr | Forest Fire History Analysis |
| BurStFin | Burns Statistics Financial |
| BurStMisc | Burns Statistics Miscellaneous |
| bursts | Markov Model for Bursty Behavior in Streams |
| busdater | Standard Date Calculations for Business |
| BusinessDuration | Calculates Business Duration Between Two Dates |
| butcher | Model Butcher |
| BuyseTest | Generalized Pairwise Comparisons |
| Bvalue | B-Value and Empirical Equivalence Bound |
| BVAR | Hierarchical Bayesian Vector Autoregression |
| bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |
| bvartools | Bayesian Inference of Vector Autoregressive and Error Correction Models |
| BVARverse | Tidy Bayesian Vector Autoregression |
| bvls | The Stark-Parker algorithm for bounded-variable least squares |
| bvpSolve | Solvers for Boundary Value Problems of Differential Equations |
| BVSNLP | Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors |
| bwd | Backward Procedure for Change-Point Detection |
| bWGR | Bayesian Whole-Genome Regression |
| BWGS | BreedWheat Genomic Selection Pipeline |
| bwimage | Describe Image Patterns in Natural Structures |
| BwQuant | Bandwidth Selectors for Local Linear Quantile Regression |
| bws | Bayesian Weighted Sums |
| BWStest | Baumgartner Weiss Schindler Test of Equal Distributions |
| bwsTools | Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs |
| bysykkel | Get City Bike Data from Norway |
| bytescircle | Statistics About Bytes Contained in a File as a Circle Plot |
| bzinb | Bivariate Zero-Inflated Negative Binomial Model Estimator |
| c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |
| c212 | Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) |
| c2c | Compare Two Classifications or Clustering Solutions of Varying Structure |
| c2d4u.tools | 'c2d4u' - CRAN Packages for 'Ubuntu' |
| c3 | 'C3.js' Chart Library |
| c3net | Inferring Large-Scale Gene Networks with C3NET |
| C443 | See a Forest for the Trees |
| C50 | C5.0 Decision Trees and Rule-Based Models |
| ca | Simple, Multiple and Joint Correspondence Analysis |
| CA3variants | Three-Way Correspondence Analysis Variants |
| cabinets | Project Specific Workspace Organization Templates |
| cabootcrs | Bootstrap Confidence Regions for Simple and Multiple Correspondence Analysis |
| cache | Cache and Retrieve Computation Results |
| cachem | Cache R Objects with Automatic Pruning |
| CACIMAR | Cross-Species Analysis of Cell Identities, Markers and Regulations |
| cacIRT | Classification Accuracy and Consistency under Item Response Theory |
| CaDENCE | Conditional Density Estimation Network Construction and Evaluation |
| CADFtest | A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests |
| CADStat | Provides a GUI to Several Statistical Methods |
| caesar | Encrypts and Decrypts Strings |
| caffsim | Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model |
| cAIC4 | Conditional Akaike Information Criterion for 'lme4' and 'nlme' |
| CAinterprTools | Graphical Aid in Correspondence Analysis Interpretation and Significance Testings |
| Cairo | R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output |
| CAISEr | Comparison of Algorithms with Iterative Sample Size Estimation |
| calACS | Calculations for All Common Subsequences |
| CALANGO | Comparative Analysis with Annotation-Based Genomic Components |
| Calculator.LR.FNs | Calculator for LR Fuzzy Numbers |
| calculus | High Dimensional Numerical and Symbolic Calculus |
| calcUnique | Simple Wrapper for Computationally Expensive Functions |
| calcWOI | Calculates the Wavelet-Based Organization Index |
| calendar | Create, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data |
| calendR | Ready to Print Monthly and Yearly Calendars Made with 'ggplot2' |
| calendRio | 'calendR' Fork with Additional Features (Backwards Compatible) |
| CALF | Coarse Approximation Linear Function |
| CALIBERrfimpute | Multiple Imputation Using MICE and Random Forest |
| calibrar | Automated Parameter Estimation for Complex (Ecological) Models |
| calibrate | Calibration of Scatterplot and Biplot Axes |
| calibrateBinary | Calibration for Computer Experiments with Binary Responses |
| CalibrateSSB | Weighting and Estimation for Panel Data with Non-Response |
| calibrationband | Calibration Bands |
| CalibrationCurves | Calibration Performance |
| calibrator | Bayesian Calibration of Complex Computer Codes |
| CalibratR | Mapping ML Scores to Calibrated Predictions |
| callr | Call R from R |
| calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |
| calpassapi | R Interface to Access CalPASS API |
| CalSim | The Calibration Simplex |
| CAMAN | Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN |
| CamelUp | 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics |
| camerondata | Datasets from "Microeconometrics: Methods and Applications" by Cameron and Trivedi |
| CAMML | Cell-Typing using Variance Adjusted Mahalanobis Distances with Multi-Labeling |
| campfin | Wrangle Campaign Finance Data |
| campsis | Generic PK/PD Simulation Platform CAMPSIS |
| campsismod | Generic Implementation of a PK/PD Model |
| camsRad | Client for CAMS Radiation Service |
| caMST | Mixed Computerized Adaptive Multistage Testing |
| camtrapR | Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses |
| canadacovid | API Wrapper for the Canadian COVID-19 Tracker |
| canadamaps | Maps of the Political and Administrative Divisions of Canada |
| canadianmaps | Canadian Mapping Made Easy |
| cancensus | Access, Retrieve, and Work with Canadian Census Data and Geography |
| cancerGI | Analyses of Cancer Gene Interaction |
| CancerGram | Prediction of Anticancer Peptides |
| cancerTiming | Estimation of Temporal Ordering of Cancer Abnormalities |
| candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |
| Canek | Batch Correction of Single Cell Transcriptome Data |
| Canopy | Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing |
| canprot | Chemical Metrics of Differentially Expressed Proteins |
| cansim | Accessing Statistics Canada Data Table and Vectors |
| CANSIM2R | Directly Extracts Complete CANSIM Data Tables |
| canvasXpress | Visualization Package for CanvasXpress in R |
| canvasXpress.data | Datasets for the 'canvasXpress' Package |
| cap | Covariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes |
| cape | Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice |
| caper | Comparative Analyses of Phylogenetics and Evolution in R |
| capitalR | Capital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules |
| capl | Compute and Visualize CAPL-2 Scores and Interpretations |
| capm | Companion Animal Population Management |
| capn | Capital Asset Pricing for Nature |
| CaPO4Sim | A Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis |
| captioner | Numbers Figures and Creates Simple Captions |
| captr | Client for the Captricity API |
| capushe | CAlibrating Penalities Using Slope HEuristics |
| car | Companion to Applied Regression |
| caracas | Computer Algebra |
| caRamel | Automatic Calibration by Evolutionary Multi Objective Algorithm |
| carat | Covariate-Adaptive Randomization for Clinical Trials |
| CARBayes | Spatial Generalised Linear Mixed Models for Areal Unit Data |
| CARBayesdata | Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages |
| CARBayesST | Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data |
| carbonate | Interact with 'carbon.js' |
| carcass | Estimation of the Number of Fatalities from Carcass Searches |
| card | Cardiovascular and Autonomic Research Design |
| carData | Companion to Applied Regression Data Sets |
| cardidates | Identification of Cardinal Dates in Ecological Time Series |
| care | High-Dimensional Regression and CAR Score Variable Selection |
| caRecall | Government of Canada Vehicle Recalls Database API Wrapper |
| careless | Procedures for Computing Indices of Careless Responding |
| caret | Classification and Regression Training |
| caretEnsemble | Ensembles of Caret Models |
| caretForecast | Time Series Forecasting Using Caret Infrastructure |
| carfima | Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data |
| caribou | Estimation of Caribou Abundance Based on Radio Telemetry Data |
| CARlasso | Conditional Autoregressive LASSO |
| CarletonStats | Functions for Statistics Classes at Carleton College |
| Carlson | Carlson Elliptic Integrals and Incomplete Elliptic Integrals |
| caROC | Continuous Biomarker Evaluation with Adjustment of Covariates |
| caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |
| carpenter | Build Common Tables of Summary Statistics for Reports |
| caRpools | CRISPR AnalyzeR for Pooled CRISPR Screens |
| carrier | Isolate Functions for Remote Execution |
| CARRoT | Predicting Categorical and Continuous Outcomes Using One in Ten Rule |
| carSurv | Correlation-Adjusted Regression Survival (CARS) Scores |
| cartograflow | Filtering Matrix for Flow Mapping |
| cartogram | Create Cartograms with R |
| cartogramR | Continuous Cartogram |
| cartography | Thematic Cartography |
| casabourse | Casablanca Stock Exchange Data |
| Cascade | Selection, Reverse-Engineering and Prediction in Cascade Networks |
| CascadeData | Experimental Data of Cascade Experiments in Genomics |
| cascadess | A Style Pronoun for 'htmltools' Tags |
| cascsim | Casualty Actuarial Society Individual Claim Simulator |
| casebase | Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression |
| caseMatch | Identify Similar Cases for Qualitative Case Studies |
| casen | Metodos De Estimacion Con Disenio Probabilistico y Estratificado en Encuesta CASEN (Estimation Methods with Probabilistic Stratified Sampling in CASEN Survey) |
| casino | Play Casino Games |
| CASMAP | Detection of Statistically Significant Combinations of SNPs in Association Mapping |
| cassandRa | Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks |
| cassowaryr | Compute Scagnostics on Pairs of Numeric Variables in a Data Set |
| CAST | 'caret' Applications for Spatial-Temporal Models |
| castor | Efficient Phylogenetics on Large Trees |
| cat | Analysis and Imputation of Categorical-Variable Datasets with Missing Values |
| cat.dt | Computerized Adaptive Testing and Decision Trees |
| cat2cat | Handling an Inconsistently Coded Categorical Variable in a Panel Dataset |
| cata | Analysis of Check-All-that-Apply (CATA) Data |
| catalog | Access the 'Spark Catalog' API via 'sparklyr' |
| CatastRo | Interface to the API 'Sede Electronica Del Catastro' |
| catch | Covariate-Adjusted Tensor Classification in High-Dimensions |
| catcont | Test, Identify, Select and Mutate Categorical or Continuous Values |
| catdap | Categorical Data Analysis Program Package |
| catdata | Categorical Data |
| CatDataAnalysis | Datasets for Categorical Data Analysis by Agresti |
| CatDyn | Fishery Stock Assessment by Catch Dynamics Models |
| cate | High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation |
| categoryEncodings | Category Variable Encodings |
| catenary | Fits a Catenary to Given Points |
| CatEncoders | Encoders for Categorical Variables |
| catfun | Categorical Data Analysis |
| cati | Community Assembly by Traits: Individuals and Beyond |
| catIrt | Simulate IRT-Based Computerized Adaptive Tests |
| catlearn | Formal Psychological Models of Categorization and Learning |
| catmap | Case-Control and TDT Meta-Analysis Package |
| catmaply | Heatmap for Categorical Data using 'plotly' |
| catnet | Categorical Bayesian Network Inference |
| caTools | Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc |
| CatPredi | Optimal Categorisation of Continuous Variables in Prediction Models |
| catR | Generation of IRT Response Patterns under Computerized Adaptive Testing |
| CatReg | Solution Paths for Linear and Logistic Regression Models with Categorical Predictors, with SCOPE Penalty |
| cats | Cohort Platform Trial Simulation |
| catseyes | Create Catseye Plots Illustrating the Normal Distribution of the Means |
| catsim | Binary and Categorical Image Similarity Index |
| catSurv | Computerized Adaptive Testing for Survey Research |
| CATT | The Cochran-Armitage Trend Test |
| CATTexact | Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test |
| cattonum | Encode Categorical Features |
| CauchyCP | Powerful Test for Survival Data under Non-Proportional Hazards |
| causact | Accelerated Bayesian Analytics with DAGs |
| causal.decomp | Causal Decomposition Analysis |
| causaldata | Example Data Sets for Causal Inference Textbooks |
| causalDisco | Tools for Causal Discovery on Observational Data |
| causaleffect | Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models |
| CausalGAM | Estimation of Causal Effects with Generalized Additive Models |
| CausalGPS | Matching on Generalized Propensity Scores with Continuous Exposures |
| CausalImpact | Inferring Causal Effects using Bayesian Structural Time-Series Models |
| CausalKinetiX | Learning Stable Structures in Kinetic Systems |
| CausalMBSTS | MBSTS Models for Causal Inference and Forecasting |
| CausalModels | Causal Inference Modeling for Estimation of Causal Effects |
| causaloptim | An Interface to Specify Causal Graphs and Compute Bounds on Causal Effects |
| causalOT | Optimal Transport Weights for Causal Inference |
| causalPAF | Causal Effect for Population Attributable Fractions (PAF) |
| CausalQueries | Make, Update, and Query Binary Causal Models |
| causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |
| causalweight | Estimation Methods for Causal Inference Based on Inverse Probability Weighting |
| CausCor | Calculate Correlations and Estimate Causality |
| CautiousLearning | Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning |
| CAvariants | Correspondence Analysis Variants |
| CB2 | CRISPR Pooled Screen Analysis using Beta-Binomial Test |
| cba | Clustering for Business Analytics |
| cbanalysis | Coffee Break Descriptive Analysis |
| CBCgrps | Compare Baseline Characteristics Between Groups |
| CBDA | Compressive Big Data Analytics |
| cbinom | Continuous Analog of a Binomial Distribution |
| cbioportalR | Browse and Query Clinical and Genomic Data from cBioPortal |
| cbl | Causal Discovery under a Confounder Blanket |
| CBPS | Covariate Balancing Propensity Score |
| cbq | Conditional Binary Quantile Models |
| cbsodataR | Statistics Netherlands (CBS) Open Data API Client |
| CBSr | Fits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data |
| CBT | Confidence Bound Target Algorithm |
| CC | Control Charts |
| CCA | Canonical Correlation Analysis |
| CCAMLRGIS | Antarctic Spatial Data Manipulation |
| ccaPP | (Robust) Canonical Correlation Analysis via Projection Pursuit |
| cccd | Class Cover Catch Digraphs |
| cccm | Crossed Classification Credibility Model |
| cccp | Cone Constrained Convex Problems |
| cccrm | Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures |
| ccda | Combined Cluster and Discriminant Analysis |
| ccdf | Distribution-Free Single-Cell Differential Expression Analysis |
| cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |
| cchsflow | Transforming and Harmonizing CCHS Variables |
| ccid | Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity |
| cclust | Convex Clustering Methods and Clustering Indexes |
| CCM | Correlation Classification Method |
| ccmEstimator | Comparative Causal Mediation Estimation |
| ccmm | Compositional Mediation Model |
| ccmReportR | Wraps 'CCM' with Utility Functions |
| ccoptimalmatch | Implementation of Case-Control Optimal Matching |
| ccostr | Estimation of Mean Costs in Censored Data |
| CCP | Significance Tests for Canonical Correlation Analysis (CCA) |
| ccpsyc | Methods for Cross-Cultural Psychology |
| ccRemover | Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data |
| ccrs | Correct and Cluster Response Style Biased Data |
| ccrtm | Coupled Chain Radiative Transfer Models |
| ccss | Cluster Circular Systematic Sampling |
| ccTensor | CUR/CX Tensor Decomposition |
| cctools | Tools for the Continuous Convolution Trick in Nonparametric Estimation |
| CCTpack | Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications |
| CCWeights | Perform Weighted Linear Regression for Calibration Curve |
| cd | CD Data for Entity Resolution |
| cdata | Fluid Data Transformations |
| CDatanet | Modeling Count Data with Peer Effects |
| cdcatR | Cognitive Diagnostic Computerized Adaptive Testing |
| cdcfluview | Retrieve Flu Season Data from the United States Centers for Disease Control and Prevention ('CDC') 'FluView' Portal |
| cdcsis | Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference |
| cder | Interface to the California Data Exchange Center |
| cdfquantreg | Quantile Regression for Random Variables on the Unit Interval |
| CDFt | Downscaling and Bias Correction via Non-Parametric CDF-Transform |
| CDLasso | Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression |
| cdlei | Cause-Deleted Life Expectancy Improvement Procedure |
| cdlTools | Tools to Download and Work with USDA Cropscape Data |
| CDM | Cognitive Diagnosis Modeling |
| cdmTools | Useful Tools for Cognitive Diagnosis Modeling |
| CDNmoney | Components of Canadian Monetary and Credit Aggregates |
| cdom | R Functions to Model CDOM Spectra |
| cdparcoord | Top Frequency-Based Parallel Coordinates |
| cdrcR | Load 'CDRC' Data |
| CDROM | Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data |
| cds | Constrained Dual Scaling for Detecting Response Styles |
| CDVineCopulaConditional | Sampling from Conditional C- and D-Vine Copulas |
| ced | The Compact Encoding Detector |
| CEDA | CRISPR Screen and Gene Expression Differential Analysis |
| CEDARS | Simple and Efficient Pipeline for Electronic Health Record Annotation |
| ceg | Chain Event Graph |
| CEGO | Combinatorial Efficient Global Optimization |
| celestial | Collection of Common Astronomical Conversion Routines and Functions |
| cellOrigins | Finds RNASeq Source Tissues Using In Situ Hybridisation Data |
| cellpypes | Cell Type Pipes for Single-Cell RNA Sequencing Data |
| cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |
| celltrackR | Motion Trajectory Analysis |
| cellVolumeDist | Functions to Fit Cell Volume Distributions and Thereby Estimate Cell Growth Rates and Division Times |
| cellWise | Analyzing Data with Cellwise Outliers |
| cem | Coarsened Exact Matching |
| CenBAR | Broken Adaptive Ridge AFT Model with Censored Data |
| CENFA | Climate and Ecological Niche Factor Analysis |
| cenGAM | Censored Regression with Smooth Terms |
| censable | Making Census Data More Usable |
| censCov | Linear Regression with a Randomly Censored Covariate |
| censo2017 | Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database) |
| censorcopula | Estimate Parameter of Bivariate Copula |
| censored | 'parsnip' Engines for Survival Models |
| censReg | Censored Regression (Tobit) Models |
| Census2016 | Data from the Australian Census 2016 |
| censusapi | Retrieve Data from the Census APIs |
| censusGeography | Changes United States Census Geographic Code into Name of Location |
| censusr | Collect Data from the Census API |
| censusxy | Access the U.S. Census Bureau's Geocoding A.P.I. System |
| censys | Tools to Query the 'Censys' API |
| centiserve | Find Graph Centrality Indices |
| centralplot | Show the Strength of Relationships Between Centre and Peripheral Items |
| centrifugeR | Non-Trivial Balance of Centrifuge Rotors |
| CEOdata | Datasets of the CEO (Centre d'Estudis d'Opinio) for Opinion Polls in Catalonia |
| CEoptim | Cross-Entropy R Package for Optimization |
| CePa | Centrality-Based Pathway Enrichment |
| cepiigeodist | CEPII's GeoDist Datasets |
| cepp | Context Driven Exploratory Projection Pursuit |
| cepR | Busca CEPs Brasileiros |
| cepreader | Read 'CEP' and Legacy 'CANOCO' Files |
| ceramic | Download Online Imagery Tiles |
| CERFIT | Causal Effect Random Forest of Interaction Tress |
| CerioliOutlierDetection | Outlier Detection Using the Iterated RMCD Method of Cerioli (2010) |
| CeRNASeek | Identification and Analysis of ceRNA Regulation |
| ceRtainty | Certainty Equivalent |
| Certara.R | Easily Install Pharmacometric Packages and Shiny Applications Developed by Certara |
| ceser | Cluster Estimated Standard Errors |
| cesR | Access the Canadian Election Study Datasets |
| cetcolor | CET Perceptually Uniform Colour Maps |
| ceterisParibus | Ceteris Paribus Profiles |
| cfa | Configural Frequency Analysis (CFA) |
| CFAcoop | Colony Formation Assay: Taking into Account Cellular Cooperation |
| cfbfastR | Access College Football Play by Play Data |
| CFC | Cause-Specific Framework for Competing-Risk Analysis |
| cfda | Categorical Functional Data Analysis |
| cfdecomp | Counterfactual Decomposition: MC Integration of the G-Formula |
| CFF | Simple Similarity for User-Based Collaborative Filtering Systems |
| cffdrs | Canadian Forest Fire Danger Rating System |
| cffr | Generate Citation File Format ('cff') Metadata for R Packages |
| cfid | Identification of Counterfactual Queries in Causal Models |
| CFilt | Collaborative Filtering by Reference Classes |
| cfma | Causal Functional Mediation Analysis |
| cfmortality | Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model |
| cforward | Forward Selection using Concordance/C-Index |
| cg | Compare Groups, Analytically and Graphically |
| cgaim | Constrained Groupwise Additive Index Models |
| cgal4h | 'CGAL' Version 4 C++ Header Files |
| cgam | Constrained Generalized Additive Model |
| cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |
| CGE | Computing General Equilibrium |
| CGGP | Composite Grid Gaussian Processes |
| cghRA | Array CGH Data Analysis and Visualization |
| cglasso | Conditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values |
| cglm | Fits Conditional Generalized Linear Models |
| cgmanalysis | Clean and Analyze Continuous Glucose Monitor Data |
| CGManalyzer | Continuous Glucose Monitoring Data Analyzer |
| cgmquantify | Analyzing Glucose and Glucose Variability |
| CGNM | Cluster Gauss-Newton Method |
| CGP | Composite Gaussian Process Models |
| CGPfunctions | Powell Miscellaneous Functions for Teaching and Learning Statistics |
| cgraph | Computational Graphs |
| cgrcusum | Continuous Time Generalized Rapid Response CUSUM |
| cgwtools | Miscellaneous Tools |
| ch | About some Small Functions |
| ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |
| chameleon | Automatic Colors for Multi-Dimensional Data |
| chandwich | Chandler-Bate Sandwich Loglikelihood Adjustment |
| changepoint | Methods for Changepoint Detection |
| changepoint.geo | Geometrically Inspired Multivariate Changepoint Detection |
| changepoint.influence | Package to Calculate the Influence of the Data on a Changepoint Segmentation |
| changepoint.np | Methods for Nonparametric Changepoint Detection |
| changepoints | A Collection of Change-Point Detection Methods |
| changepointsHD | Change-Point Estimation for Expensive and High-Dimensional Models |
| changepointsVar | Change-Points Detections for Changes in Variance |
| ChangePointTaylor | Identify Changes in Mean |
| ChangepointTesting | Change Point Estimation for Clustered Signals |
| changepointTests | Change Point Tests for Joint Distributions and Copulas |
| changer | Change R Package Name |
| ChannelAttribution | Markov Model for Online Multi-Channel Attribution |
| ChannelAttributionApp | Shiny Web Application for the Multichannel Attribution Problem |
| chantrics | Loglikelihood Adjustments for Econometric Models |
| Chaos01 | 0-1 Test for Chaos |
| ChaosGame | Chaos Game |
| charlatan | Make Fake Data |
| chartql | Simplified Language for Plots and Charts |
| cheatsheet | Download R Cheat Sheets Locally |
| checkarg | Check the Basic Validity of a (Function) Argument |
| CheckDigit | Calculate and Verify Check Digits |
| checkdown | Check-Fields and Check-Boxes for 'rmarkdown' |
| checkLuhn | Checks if a Number is Valid Using the Luhn Algorithm |
| checkmate | Fast and Versatile Argument Checks |
| checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |
| checkr | Check the Properties of Common R Objects |
| cheddar | Analysis and Visualisation of Ecological Communities |
| cheem | Interactively Explore the Support of Local Explanations with the Radial Tour |
| cheese | Tools for Working with Data During Statistical Analysis |
| chemCal | Calibration Functions for Analytical Chemistry |
| chemmodlab | A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models |
| chemodiv | Analysing Chemodiversity of Phytochemical Data |
| chemometrics | Multivariate Statistical Analysis in Chemometrics |
| ChemoSpec | Exploratory Chemometrics for Spectroscopy |
| ChemoSpec2D | Exploratory Chemometrics for 2D Spectroscopy |
| ChemoSpecUtils | Functions Supporting Packages ChemoSpec and ChemoSpec2D |
| cherry | Multiple Testing Methods for Exploratory Research |
| cherryblossom | Cherry Blossom Run Race Results |
| chess | Read, Write, Create and Explore Chess Games |
| chessR | Functions to Extract, Clean and Analyse Online Chess Game Data |
| chest | Change-in-Estimate Approach to Assess Confounding Effects |
| CHFF | Closest History Flow Field Forecasting for Bivariate Time Series |
| chi | The Chi Distribution |
| chicane | Capture Hi-C Analysis Engine |
| chickn | 'Compressive' Hierarchical Kernel Clustering Toolbox |
| childdevdata | Child Development Data |
| childesr | Accessing the 'CHILDES' Database |
| childsds | Data and Methods Around Reference Values in Pediatrics |
| chilemapas | Mapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile) |
| ChillModels | Processing Chill and Heat Models for Temperate Fruit Trees |
| chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |
| chinese.misc | Miscellaneous Tools for Chinese Text Mining and More |
| ChineseNames | Chinese Name Database 1930-2008 |
| chipPCR | Toolkit of Helper Functions to Pre-Process Amplification Data |
| ChIPtest | Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data |
| chirps | API Client for CHIRPS and CHIRTS |
| chisq.posthoc.test | A Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data |
| chisquare | Chi-Square and G-Square Test of Independence, Residual Analysis, and Measures of Categorical Association |
| chk | Check User-Supplied Function Arguments |
| chkptstanr | Checkpoint MCMC Sampling with 'Stan' |
| chlorpromazineR | Convert Antipsychotic Doses to Chlorpromazine Equivalents |
| CHMM | Coupled Hidden Markov Models |
| CHNCapitalStock | Compute Chinese Capital Stocks |
| chngpt | Estimation and Hypothesis Testing for Threshold Regression |
| CHNOSZ | Thermodynamic Calculations and Diagrams for Geochemistry |
| choiceDes | Design Functions for Choice Studies |
| ChoiceModelR | Choice Modeling in R |
| CHOIRBM | Plots the CHOIR Body Map |
| cholera | Amend, Augment and Aid Analysis of John Snow's Cholera Map |
| CholWishart | Cholesky Decomposition of the Wishart Distribution |
| choplump | Permutation Test for Some Positive and Many Zero Responses |
| chopthin | The Chopthin Resampler |
| ChoR | Chordalysis R Package |
| chords | Estimation in Respondent Driven Samples |
| choroplethr | Simplify the Creation of Choropleth Maps in R |
| choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |
| choroplethrMaps | Contains Maps Used by the 'choroplethr' Package |
| christmas | Generation of Different Animated Christmas Cards |
| chromatographR | Import and Analyze HPLC-DAD/UV Data |
| chromConverter | Chromatographic File Converter |
| chromoMap | Interactive Genomic Visualization of Biological Data |
| chromote | Headless Chrome Web Browser Interface |
| chromseq | Split Chromosome 'Fasta' File |
| chron | Chronological Objects which can Handle Dates and Times |
| chronicle | Grammar for Creating R Markdown Reports |
| chronicler | Add Logging to Functions |
| chronochrt | Creating Chronological Charts |
| chronosphere | Earth System History Variables |
| CHsharp | Choi and Hall Style Data Sharpening |
| chunked | Chunkwise Text-File Processing for 'dplyr' |
| chunkhooks | Chunk Hooks for 'R Markdown' |
| chunkR | Read Tables in Chunks |
| chyper | Functions for Conditional Hypergeometric Distributions |
| CIAAWconsensus | Isotope Ratio Meta-Analysis |
| CIARA | Cluster Independent Algorithm for Rare Cell Types Identification |
| CICA | Clusterwise Independent Component Analysis |
| ciccr | Causal Inference in Case-Control Studies |
| cicerone | Provide Tours of 'Shiny' Applications |
| CIDER | Meta-Clustering for Single-Cell Data Integration and Evaluation |
| CIEE | Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations |
| cif | Cointegrated ICU Forecasting |
| CIFsmry | Weighted summary of cumulative incidence functions |
| cifti | Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files |
| ciftiTools | Tools for Reading, Writing, Viewing and Manipulating CIFTI Files |
| CIM | Compositional Impact of Migration |
| cimir | Interface to the CIMIS Web API |
| CIMTx | Causal Inference for Multiple Treatments with a Binary Outcome |
| cinaR | A Computational Pipeline for Bulk 'ATAC-Seq' Profiles |
| cinaRgenesets | Ready-to-Use Curated Gene Sets for 'cinaR' |
| CINE | Classification International Normalized of Education |
| CINID | Curculionidae INstar IDentification |
| CINmetrics | Calculate Chromosomal Instability Metrics |
| CINNA | Deciphering Central Informative Nodes in Network Analysis |
| cinterpolate | Interpolation From C |
| CIPerm | Computationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods |
| CIplot | Functions to Plot Confidence Interval |
| cir | Centered Isotonic Regression and Dose-Response Utilities |
| circacompare | Analyses of Circadian Data |
| circle | R Client Package for Circle CI |
| circletyper | Curve Text Elements in 'Shiny' Using 'CircleType.js' |
| circlize | Circular Visualization |
| CircMLE | Maximum Likelihood Analysis of Circular Data |
| CircNNTSR | Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models |
| CircOutlier | Detection of Outliers in Circular-Circular Regression |
| CircSpaceTime | Spatial and Spatio-Temporal Bayesian Model for Circular Data |
| CircStats | Circular Statistics, from "Topics in Circular Statistics" (2001) |
| circular | Circular Statistics |
| CircularDDM | Circular Drift-Diffusion Model |
| circularEV | Extreme Value Analysis for Circular Data |
| CircularSilhouette | Fast Silhouette on Circular or Linear Data Clusters |
| circumplex | Analysis and Visualization of Circular Data |
| cIRT | Choice Item Response Theory |
| CIS.DGLM | Covariates, Interaction, and Selection for DGLM |
| cit | Causal Inference Test |
| CITAN | CITation ANalysis Toolpack |
| citation | Software Citation Tools |
| citationchaser | Perform Forward and Backwards Chasing in Evidence Syntheses |
| citecorp | Client for the Open Citations Corpus |
| cito | Building and Training Neural Networks |
| ciTools | Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models |
| citrus | Customer Intelligence Tool for Rapid Understandable Segmentation |
| ciu | Contextual Importance and Utility |
| ciuupi2 | Kabaila and Giri (2009) Confidence Interval |
| civis | R Client for the 'Civis Platform API' |
| CJAMP | Copula-Based Joint Analysis of Multiple Phenotypes |
| cjar | R Client for 'Customer Journey Analytics' ('CJA') API |
| cjbart | Heterogeneous Effects Analysis of Conjoint Experiments |
| cjoint | AMCE Estimator for Conjoint Experiments |
| ckanr | Client for the Comprehensive Knowledge Archive Network ('CKAN') API |
| CKAT | Composite Kernel Association Test for Pharmacogenetics Studies |
| CKLRT | Composite Kernel Machine Regression Based on Likelihood Ratio Test |
| Ckmeans.1d.dp | Optimal, Fast, and Reproducible Univariate Clustering |
| CKMRpop | Forward-in-Time Simulation and Tallying of Pairwise Relationships |
| CLA | Critical Line Algorithm in Pure R |
| Claddis | Measuring Morphological Diversity and Evolutionary Tempo |
| cladoRcpp | C++ Implementations of Phylogenetic Cladogenesis Calculations |
| ClaimsProblems | Analysis of Conflicting Claims |
| clam | Classical Age-Depth Modelling of Cores from Deposits |
| clampSeg | Idealisation of Patch Clamp Recordings |
| ClamR | Time Series Modeling for Climate Change Proxies |
| clarifai | Access to Clarifai API |
| clarkeTest | Distribution-Free Tests of Non-Nested Models |
| class | Functions for Classification |
| ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |
| ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |
| classGraph | Construct Graphs of S4 Class Hierarchies |
| classifierplots | Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots |
| classifly | Explore Classification Models in High Dimensions |
| classInt | Choose Univariate Class Intervals |
| classmap | Visualizing Classification Results |
| CLAST | Exact Confidence Limits after a Sequential Trial |
| cld2 | Google's Compact Language Detector 2 |
| cld3 | Google's Compact Language Detector 3 |
| clda | Convolution-Based Linear Discriminant Analysis |
| clean | Fast and Easy Data Cleaning |
| CleanBSequences | Curing of Biological Sequences |
| cleancall | C Resource Cleanup via Exit Handlers |
| cleandata | To Inspect and Manipulate Data; and to Keep Track of This Process |
| cleaner | Fast and Easy Data Cleaning |
| cleangeo | Cleaning Geometries from Spatial Objects |
| cleanNLP | A Tidy Data Model for Natural Language Processing |
| cleanr | Helps You to Code Cleaner |
| cleanrmd | Clean Class-Less 'R Markdown' HTML Documents |
| cleanTS | Testbench for Univariate Time Series Cleaning |
| cleaR | Clean the R Console and Environment |
| clere | Simultaneous Variables Clustering and Regression |
| clespr | Composite Likelihood Estimation for Spatial Data |
| clevr | Clustering and Link Prediction Evaluation in R |
| clhs | Conditioned Latin Hypercube Sampling |
| cli | Helpers for Developing Command Line Interfaces |
| cliapp | Create Rich Command Line Applications |
| ClickClust | Model-Based Clustering of Categorical Sequences |
| ClickClustCont | Mixtures of Continuous Time Markov Models |
| ClickHouseHTTP | A Simple HTTP Database Interface to 'ClickHouse' |
| clickR | Semi-Automatic Preprocessing of Messy Data with Change Tracking for Dataset Cleaning |
| clickstream | Analyzes Clickstreams Based on Markov Chains |
| cliff | Execute Command Line Programs Interactively |
| clifford | Arbitrary Dimensional Clifford Algebras |
| clifro | Easily Download and Visualise Climate Data from CliFlo |
| CliftLRD | Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series |
| clikcorr | Censoring Data and Likelihood-Based Correlation Estimation |
| climaemet | Climate AEMET Tools |
| climateStability | Estimating Climate Stability from Climate Model Data |
| climatol | Climate Tools (Series Homogenization and Derived Products) |
| climatrends | Climate Variability Indices for Ecological Modelling |
| ClimClass | Climate Classification According to Several Indices |
| climdex.pcic | PCIC Implementation of Climdex Routines |
| clime | Constrained L1-Minimization for Inverse (Covariance) Matrix Estimation |
| climetrics | Climate Change Metrics |
| climextRemes | Tools for Analyzing Climate Extremes |
| ClimInd | Climate Indices |
| ClimMobTools | API Client for the 'ClimMob' Platform |
| ClimProjDiags | Set of Tools to Compute Various Climate Indices |
| climwin | Climate Window Analysis |
| clinDataReview | Clinical Data Review Tool |
| clinDR | Simulation and Analysis Tools for Clinical Dose Response Modeling |
| clinfun | Clinical Trial Design and Data Analysis Functions |
| clinicalsignificance | Determine the Clinical Significance in Clinical Trials |
| ClinicalTrialSummary | Summary Measures for Clinical Trials with Survival Outcomes |
| ClinicalUtilityRecal | Recalibration Methods for Improved Clinical Utility of Risk Scores |
| clinmon | Hemodynamic Calculations from Clinical Monitoring |
| clinPK | Clinical Pharmacokinetics Toolkit |
| clinsig | Clinical Significance Functions |
| ClinSigMeasures | Clinical Significance Measures |
| clinspacy | Clinical Natural Language Processing using 'spaCy', 'scispaCy', and 'medspaCy' |
| clintools | Tools for Clinical Research |
| clinUtils | General Utility Functions for Analysis of Clinical Data |
| clipp | Calculating Likelihoods by Pedigree Paring |
| clipr | Read and Write from the System Clipboard |
| CliquePercolation | Clique Percolation for Networks |
| clisymbols | Unicode Symbols at the R Prompt |
| CLME | Constrained Inference for Linear Mixed Effects Models |
| clock | Date-Time Types and Tools |
| clockify | A Wrapper for the 'Clockify' API |
| clogitboost | Boosting Conditional Logit Model |
| clogitL1 | Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties |
| clogitLasso | Sparse Conditional Logistic Regression for Matched Studies |
| CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data |
| CLONETv2 | Clonality Estimates in Tumor |
| clordr | Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data |
| cloudml | Interface to the Google Cloud Machine Learning Platform |
| cloudos | R Client Library for CloudOS |
| cloudstoR | Simplifies Access to Cloudstor API |
| cloudUtil | Cloud Utilization Plots |
| clr | Curve Linear Regression via Dimension Reduction |
| clttools | Central Limit Theorem Experiments (Theoretical and Simulation) |
| clubSandwich | Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections |
| clue | Cluster Ensembles |
| ClueR | Cluster Evaluation |
| CluMP | Clustering of Micro Panel Data |
| ClusBoot | Bootstrap Clustering |
| cluscov | Clustered Covariate Regression |
| ClusPred | Simultaneous Semi-Parametric Estimation of Clustering and Regression |
| clusrank | Wilcoxon Rank Tests for Clustered Data |
| ClusROC | ROC Analysis in Three-Class Classification Problems for Clustered Data |
| ClussCluster | Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data |
| clust.bin.pair | Statistical Methods for Analyzing Clustered Matched Pair Data |
| clustAnalytics | Cluster Evaluation on Graphs |
| ClustAssess | Tools for Assessing Clustering |
| ClustBlock | Clustering of Datasets |
| clustcurv | Determining Groups in Multiples Curves |
| clustDRM | Clustering Dose-Response Curves and Fitting Appropriate Models to Them |
| clustEff | Clusters of Effects Curves in Quantile Regression Models |
| cluster | "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. |
| cluster.datasets | Cluster Analysis Data Sets |
| Cluster.OBeu | Cluster Analysis 'OpenBudgets.eu' |
| clusterability | Performs Tests for Cluster Tendency of a Data Set |
| ClusterBootstrap | Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap |
| clusterCons | Consensus Clustering using Multiple Algorithms and Parameters |
| clusterCrit | Clustering Indices |
| clusteredinterference | Causal Effects from Observational Studies with Clustered Interference |
| ClusteredMutations | Location and Visualization of Clustered Somatic Mutations |
| clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |
| clusterhap | Clustering Genotypes in Haplotypes |
| clusterHD | Tools for Clustering High-Dimensional Data |
| Clustering | Techniques for Evaluating Clustering |
| clustering.sc.dp | Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint |
| clustermole | Unbiased Single-Cell Transcriptomic Data Cell Type Identification |
| clustermq | Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) |
| clusternomics | Integrative Clustering for Heterogeneous Biomedical Datasets |
| clusterPower | Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials |
| ClusterR | Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering |
| ClusterRankTest | Rank Tests for Clustered Data |
| clusterRepro | Reproducibility of Gene Expression Clusters |
| clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |
| clusterSim | Searching for Optimal Clustering Procedure for a Data Set |
| ClusterStability | Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions |
| clustertend | Check the Clustering Tendency |
| ClustGeo | Hierarchical Clustering with Spatial Constraints |
| ClustImpute | K-Means Clustering with Build-in Missing Data Imputation |
| clustMD | Model Based Clustering for Mixed Data |
| clustMixType | k-Prototypes Clustering for Mixed Variable-Type Data |
| ClustMMDD | Variable Selection in Clustering by Mixture Models for Discrete Data |
| ClustOfVar | Clustering of Variables |
| ClusTorus | Prediction and Clustering on the Torus by Conformal Prediction |
| clustra | Clustering Longitudinal Trajectories |
| clusTransition | Monitor Changes in Cluster Solutions of Dynamic Datasets |
| clustrd | Methods for Joint Dimension Reduction and Clustering |
| clustree | Visualise Clusterings at Different Resolutions |
| clustringr | Cluster Strings by Edit-Distance |
| CLUSTShiny | Interactive Document for Working with Cluster Analysis |
| ClustVarLV | Clustering of Variables Around Latent Variables |
| clustvarsel | Variable Selection for Gaussian Model-Based Clustering |
| ClusVis | Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering |
| clv | Cluster Validation Techniques |
| clValid | Validation of Clustering Results |
| CLVTools | Tools for Customer Lifetime Value Estimation |
| cmaes | Covariance Matrix Adapting Evolutionary Strategy |
| cmaesr | Covariance Matrix Adaptation Evolution Strategy |
| CMAPSS | Commercial Modular Aero-Propulsion System Simulation Data Set |
| CMapViz | Representation Tool For Output Of Connectivity Map (CMap) Analysis |
| cmaRs | Implementation of the Conic Multivariate Adaptive Regression Splines in R |
| cmce | Computer Model Calibration for Deterministic and Stochastic Simulators |
| cmcR | An Implementation of the 'Congruent Matching Cells' Method |
| cmdfun | Framework for Building Interfaces to Shell Commands |
| cmenet | Bi-Level Selection of Conditional Main Effects |
| CMF | Collective Matrix Factorization |
| cmfrec | Collective Matrix Factorization for Recommender Systems |
| cmhc | Access, Retrieve, and Work with CMHC Data |
| CMHNPA | Cochran-Mantel-Haenszel and Nonparametric ANOVA |
| cml | Conditional Manifold Learning |
| CMLS | Constrained Multivariate Least Squares |
| cmm | Categorical Marginal Models |
| cmmr | CEU Mass Mediator RESTful API |
| cmna | Computational Methods for Numerical Analysis |
| cmocean | Beautiful Colour Maps for Oceanography |
| CMplot | Circle Manhattan Plot |
| cmprsk | Subdistribution Analysis of Competing Risks |
| cmprskcoxmsm | Use IPW to Estimate Treatment Effect under Competing Risks |
| cmprskQR | Analysis of Competing Risks Using Quantile Regressions |
| cmpsR | R Implementation of Congruent Matching Profile Segments Method |
| cmR | Analysis of Cardiac Magnetic Resonance Images |
| cmrutils | Misc Functions of the Center for Mathematical Research |
| cms | Calculate Medicare Reimbursement |
| cmsaf | A Toolbox for CM SAF NetCDF Data |
| cmsafops | Tools for CM SAF NetCDF Data |
| cmsafvis | Tools to Visualize CM SAF NetCDF Data |
| CMShiny | Interactive Document for Working with Confusion Matrix |
| cmstatr | Statistical Methods for Composite Material Data |
| cmtest | Conditional Moments Test |
| cmvnorm | The Complex Multivariate Gaussian Distribution |
| cna | Causal Modeling with Coincidence Analysis |
| CNAIM | Common Network Asset Indices Methodology (CNAIM) |
| cnaOpt | Optimizing Consistency and Coverage in Configurational Causal Modeling |
| cnbdistr | Conditional Negative Binomial Distribution |
| cncaGUI | Canonical Non-Symmetrical Correspondence Analysis in R |
| CNLTreg | Complex-Valued Wavelet Lifting for Signal Denoising |
| CNLTtsa | Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis |
| cNORM | Continuous Norming |
| CNprep | Pre-Process DNA Copy Number (CN) Data for Detection of CN Events |
| CNPS | Nonparametric Statistics |
| cns | Color Naming System |
| cnum | Chinese Numerals Processing |
| CNVRG | Dirichlet Multinomial Modeling of Relative Abundance Data |
| CNVScope | A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization |
| coala | A Framework for Coalescent Simulation |
| coalescentMCMC | MCMC Algorithms for the Coalescent |
| coalitions | Bayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies |
| coarseDataTools | Analysis of Coarsely Observed Data |
| cobalt | Covariate Balance Tables and Plots |
| cobiclust | Biclustering via Latent Block Model Adapted to Overdispersed Count Data |
| cobs | Constrained B-Splines (Sparse Matrix Based) |
| coca | Cluster-of-Clusters Analysis |
| cocktailApp | 'shiny' App to Discover Cocktails |
| CoClust | Copula Based Cluster Analysis |
| COCONUT | COmbat CO-Normalization Using conTrols (COCONUT) |
| cocor | Comparing Correlations |
| cocorresp | Co-Correspondence Analysis Methods |
| cocron | Statistical Comparisons of Two or more Alpha Coefficients |
| coda | Output Analysis and Diagnostics for MCMC |
| coda.base | A Basic Set of Functions for Compositional Data Analysis |
| coda4microbiome | Compositional Data Analysis for Microbiome Studies |
| codacore | Learning Sparse Log-Ratios for Compositional Data |
| codalm | Transformation-Free Linear Regression for Compositional Outcomes and Predictors |
| CodataGS | Genomic Prediction Using SNP Codata |
| cOde | Automated C Code Generation for 'deSolve', 'bvpSolve' |
| codebook | Automatic Codebooks from Metadata Encoded in Dataset Attributes |
| codebookr | Create Codebooks from Data Frames |
| codebreaker | Retro Logic Game |
| codeCollection | Collection of Codes with Labels |
| CodeDepends | Analysis of R Code for Reproducible Research and Code Comprehension |
| codemeta | A Smaller 'codemetar' Package |
| codemetar | Generate 'CodeMeta' Metadata for R Packages |
| codename | Generation of Code Names for Organizations, People, Projects, and Whatever Else |
| codep | Multiscale Codependence Analysis |
| coder | Deterministic Categorization of Items Based on External Code Data |
| codetools | Code Analysis Tools for R |
| codexcopd | The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations |
| codified | Produce Standard/Formalized Demographics Tables |
| CoDiNA | Co-Expression Differential Network Analysis |
| codingMatrices | Alternative Factor Coding Matrices for Linear Model Formulae |
| codyn | Community Dynamics Metrics |
| coefficientalpha | Robust Coefficient Alpha and Omega with Missing and Non-Normal Data |
| coefplot | Plots Coefficients from Fitted Models |
| coenocliner | Coenocline Simulation |
| coenoflex | Gradient-Based Coenospace Vegetation Simulator |
| cofad | Contrast Analyses for Factorial Designs |
| cofeatureR | Generate Cofeature Matrices |
| coffee | Chronological Ordering for Fossils and Environmental Events |
| CoFRA | Complete Functional Regulation Analysis |
| coga | Convolution of Gamma Distributions |
| cogmapr | Cognitive Mapping Tools Based on Coding of Textual Sources |
| cognitoR | Authentication for 'Shiny' Apps with 'Amazon Cognito' |
| cohortBuilder | Data Source Agnostic Filtering Tools |
| CohortPlat | Simulation of Cohort Platform Trials for Combination Treatments |
| cohorts | Cohort Analysis Made Easy |
| cohorttools | Cohort Data Analyses |
| coil | Contextualization and Evaluation of COI-5P Barcode Data |
| CoImp | Copula Based Imputation Method |
| coin | Conditional Inference Procedures in a Permutation Test Framework |
| coinmarketcapr | Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap |
| Coinprofile | Coincident Profile |
| COINr | Composite Indicator Construction and Analysis |
| cointmonitoR | Consistent Monitoring of Stationarity and Cointegrating Relationships |
| cointReg | Parameter Estimation and Inference in a Cointegrating Regression |
| cold | Count Longitudinal Data |
| colf | Constrained Optimization on Linear Function |
| collapse | Advanced and Fast Data Transformation |
| CollapseLevels | Collapses Levels, Computes Information Value and WoE |
| collapsibleTree | Interactive Collapsible Tree Diagrams using 'D3.js' |
| collateral | Quickly Evaluate Captured Side Effects |
| collections | High Performance Container Data Types |
| collidr | Check for Namespace Collisions Across Packages and Functions on CRAN |
| collin | Visualization the Effects of Collinearity in Distributed Lag Models and Other Linear Models |
| CollocInfer | Collocation Inference for Dynamic Systems |
| collpcm | Collapsed Latent Position Cluster Model for Social Networks |
| collUtils | Auxiliary Package for Package 'CollapsABEL' |
| colmozzie | Dengue Cases and Climate Variables in Colombo Sri Lanka |
| coloc | Colocalisation Tests of Two Genetic Traits |
| colocalization | Normalized Spatial Intensity Correlation |
| colocalized | Clusters of Colocalized Sequences |
| colocr | Conduct Co-Localization Analysis of Fluorescence Microscopy Images |
| colorblindcheck | Check Color Palettes for Problems with Color Vision Deficiency |
| colorBlindness | Safe Color Set for Color Blindness |
| colorDF | Colorful Data Frames in R Terminal |
| colordistance | Distance Metrics for Image Color Similarity |
| colorednoise | Simulate Temporally Autocorrelated Populations |
| colorfindr | Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images |
| colorhcplot | Colorful Hierarchical Clustering Dendrograms |
| colorhex | Colors and Palettes from Color-Hex |
| colorist | Coloring Wildlife Distributions in Space-Time |
| colorizer | Colorize Old Images Using the 'DeOldify' Image Colorization API |
| colormap | Color Palettes using Colormaps Node Module |
| ColorNameR | Give Colors a Name |
| colorpatch | Optimized Rendering of Fold Changes and Confidence Values |
| colorr | Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams |
| colorRamps | Builds Color Tables |
| colorscience | Color Science Methods and Data |
| colorspace | A Toolbox for Manipulating and Assessing Colors and Palettes |
| colorSpec | Color Calculations with Emphasis on Spectral Data |
| colourlovers | R Client for the COLOURlovers API |
| colourpicker | A Colour Picker Tool for Shiny and for Selecting Colours in Plots |
| colourvalues | Assigns Colours to Values |
| colourvision | Colour Vision Models |
| colt | Command-Line Color Themes |
| comat | Creates Co-Occurrence Matrices of Spatial Data |
| comato | Analysis of Concept Maps and Concept Landscapes |
| COMBAT | A Combined Association Test for Genes using Summary Statistics |
| combinat | combinatorics utilities |
| combinationpvalues | Combination of Independent P-Values |
| combinedevents | Calculate Scores and Marks for Track and Field Combined Events |
| CombinePortfolio | Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies |
| combinIT | A Combined Intercation Test for Unreplicated Two-Way Tables |
| CombinS | Construction Methods of some Series of PBIB Designs |
| combiroc | Selection and Ranking of Omics Biomarkers Combinations Made Easy |
| combiter | Combinatorics Iterators |
| comclim | Community Climate Statistics |
| cometExactTest | Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm |
| cometr | 'Comet' API for R |
| comf | Models and Equations for Human Comfort Research |
| comFuncs | Commonly Used Functions for R Shiny Applications |
| ComICS | Computational Methods for Immune Cell-Type Subsets |
| COMIX | Coarsened Mixtures of Hierarchical Skew Kernels |
| CommEcol | Community Ecology Analyses |
| commentr | Print Nicely Formatted Comments for Use in Script Files |
| common | Solutions for Common Problems in Base R |
| CommonJavaJars | Useful Libraries for Building a Java Based GUI under R |
| commonmark | High Performance CommonMark and Github Markdown Rendering in R |
| CommonMean.Copula | Common Mean Vector under Copula Models |
| commonsMath | JAR Files of the Apache Commons Mathematics Library |
| communication | Feature Extraction and Model Estimation for Audio of Human Speech |
| comorbidity | Computing Comorbidity Scores |
| comorosmaps | Comoro Islands Maps |
| Comp2ROC | Compare Two ROC Curves that Intersect |
| Compack | Regression with Compositional Covariates |
| comparator | Comparison Functions for Clustering and Record Linkage |
| compare | Comparing Objects for Differences |
| compareC | Compare Two Correlated C Indices with Right-Censored Survival Outcome |
| CompareCausalNetworks | Interface to Diverse Estimation Methods of Causal Networks |
| CompAREdesign | Statistical Functions for the Design of Studies with Composite Endpoints |
| compareDF | Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure |
| compareGroups | Descriptive Analysis by Groups |
| comparer | Compare Output and Run Time |
| CompareTests | Correct for Verification Bias in Diagnostic Accuracy & Agreement |
| comparison | Multivariate Likelihood Ratio Calculation and Evaluation |
| ComparisonCR | Comparison of Cumulative Incidence Between Two Groups Under Competing Risks |
| ComparisonSurv | Comparison of Survival Curves Between Two Groups |
| compas | Conformational Manipulations of Protein Atomic Structures |
| CompDist | Multisection Composite Distributions |
| comperank | Ranking Methods for Competition Results |
| comperes | Manage Competition Results |
| competitiontoolbox | A Graphical User Interface for Antitrust and Trade Practitioners |
| compHclust | Complementary Hierarchical Clustering |
| compicc | Calculate the Confidence Interval for the Difference of ICCs |
| Compind | Composite Indicators Functions |
| completejourney | Retail Shopping Data |
| complexity | Calculate the Proportion of Permutations in Line with an Informative Hypothesis |
| complexNet | Complex Network Generation |
| complexplus | Functions of Complex or Real Variable |
| ComplexUpset | Create Complex UpSet Plots Using 'ggplot2' Components |
| complmrob | Robust Linear Regression with Compositional Data as Covariates |
| CompModels | Pseudo Computer Models for Optimization |
| COMPoissonReg | Conway-Maxwell Poisson (COM-Poisson) Regression |
| Compositional | Compositional Data Analysis |
| compositions | Compositional Data Analysis |
| composits | Compositional, Multivariate and Univariate Time Series Outlier Ensemble |
| compound.Cox | Univariate Feature Selection and Compound Covariate for Predicting Survival |
| CompoundEvents | Statistical Modeling of Compound Events |
| CompQuadForm | Distribution Function of Quadratic Forms in Normal Variables |
| CompR | Paired Comparison Data Analysis |
| comprehenr | List Comprehensions |
| compute.es | Compute Effect Sizes |
| comsimitv | Flexible Framework for Simulating Community Assembly |
| comtradr | Interface with the United Nations Comtrade API |
| con2aqi | Calculate the AQI from Pollutant Concentration |
| con2lki | Calculate the Dutch Air Quality Index (LKI) |
| Conake | Continuous Associated Kernel Estimation |
| concatenate | Human-Friendly Text from Unknown Strings |
| concatipede | Easy Concatenation of Fasta Sequences |
| concaveman | A Very Fast 2D Concave Hull Algorithm |
| conclust | Pairwise Constraints Clustering |
| concom | Connected Components of an Undirected Graph |
| ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |
| concordance | Product Concordance |
| ConcordanceTest | An Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance |
| concorR | CONCOR and Supplemental Functions |
| concreg | Concordance Regression |
| concstats | Market Structure, Concentration and Inequality Measures |
| CONCUR | Copy Number Profile Curve-Based Association Test |
| concurve | Computes & Plots Compatibility (Confidence), Surprisal, & Likelihood Distributions |
| cond | Approximate Conditional Inference for Logistic and Loglinear Models |
| CondCopulas | Estimation and Inference for Conditional Copula Models |
| condformat | Conditional Formatting in Data Frames |
| condGEE | Parameter Estimation in Conditional GEE for Recurrent Event Gap Times |
| CondIndTests | Nonlinear Conditional Independence Tests |
| condir | Computation of P Values and Bayes Factors for Conditioning Data |
| CondiS | Censored Data Imputation for Direct Modeling |
| conditionz | Control How Many Times Conditions are Thrown |
| condmixt | Conditional Density Estimation with Neural Network Conditional Mixtures |
| condMVNorm | Conditional Multivariate Normal Distribution |
| CondMVT | Conditional Multivariate t Distribution, Expectation Maximization Algorithm, and Its Stochastic Variants |
| condSURV | Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data |
| condTruncMVN | Conditional Truncated Multivariate Normal Distribution |
| conductor | Create Tours in 'Shiny' Apps Using 'Shepherd.js' |
| condusco | Query-Driven Pipeline Execution and Query Templates |
| condvis | Conditional Visualization for Statistical Models |
| condvis2 | Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny |
| coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |
| conf | Visualization and Analysis of Statistical Measures of Confidence |
| conf.design | Construction of factorial designs |
| confidence | Confidence Estimation of Environmental State Classifications |
| config | Manage Environment Specific Configuration Values |
| ConfigParser | Package to Parse an INI File, Including Variable Interpolation |
| configr | An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML) |
| configural | Multivariate Profile Analysis |
| confinterpret | Descriptive Interpretations of Confidence Intervals |
| confintr | Confidence Intervals |
| ConfIntVariance | Confidence Interval for the Univariate Population Variance without Normality Assumption |
| conflicted | An Alternative Conflict Resolution Strategy |
| conflr | Client for 'Confluence' API |
| conformalbayes | Jackknife(+) Predictive Intervals for Bayesian Models |
| conformalClassification | Transductive and Inductive Conformal Predictions for Classification Problems |
| conformalInference.fd | Tools for Conformal Inference for Regression in Multivariate Functional Setting |
| conformalInference.multi | Conformal Inference Tools for Regression with Multivariate Response |
| ConformalSmallest | Efficient Tuning-Free Conformal Prediction |
| confoundr | Diagnostics for Confounding of Time-Varying and Other Joint Exposures |
| confreq | Configural Frequencies Analysis Using Log-Linear Modeling |
| confSAM | Estimates and Bounds for the False Discovery Proportion, by Permutation |
| ConfusionTableR | Confusion Matrix Toolset |
| CongreveLamsdell2016 | Distance Metrics for Trees Generated by Congreve and Lamsdell |
| CoNI | Correlation Guided Network Integration (CoNI) |
| conicfit | Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov |
| Conigrave | Flexible Tools for Multiple Imputation |
| conjoint | An Implementation of Conjoint Analysis Method |
| conjurer | A Parametric Method for Generating Synthetic Data |
| conleyreg | Estimations using Conley Standard Errors |
| conmet | Construct Measurement Evaluation Tool |
| ConNEcT | Contingency Measure-Based Networks for Binary Time Series |
| connectapi | Utilities for Interacting with the 'RStudio Connect' Server API |
| connectwidgets | Organize and Curate Your Content Within 'RStudio Connect' |
| ConnMatTools | Tools for Working with Connectivity Data |
| conogive | Congeneric Normal-Ogive Model |
| conos | Clustering on Network of Samples |
| conover.test | Conover-Iman Test of Multiple Comparisons Using Rank Sums |
| conquer | Convolution-Type Smoothed Quantile Regression |
| conquestr | An R Package to Extend 'ACER ConQuest' |
| ConR | Computation of Parameters Used in Preliminary Assessment of Conservation Status |
| conserveR | Identifying Conservation Prioritization Methods Based on Data Availability |
| consolechoice | An Easy and Quick Way to Loop a Character Vector as a Menu in the Console |
| consort | Create Consort Diagram |
| consortr | Interactive Consort Flow Diagrams |
| ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |
| ConsRank | Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach |
| ConsRankClass | Classification and Clustering of Preference Rankings |
| ConsReg | Fits Regression & ARMA Models Subject to Constraints to the Coefficient |
| constants | Reference on Constants, Units and Uncertainty |
| constellation | Identify Event Sequences Using Time Series Joins |
| conStruct | Models Spatially Continuous and Discrete Population Genetic Structure |
| contact | Creating Contact and Social Networks |
| contactdata | Social Contact Matrices for 152 Countries |
| container | Extending Base R List |
| ContaminatedMixt | Clustering and Classification with the Contaminated Normal |
| contentid | An Interface for Content-Based Identifiers |
| conText | 'a la Carte' on Text (ConText) Embedding Regression |
| contfrac | Continued Fractions |
| contFracR | Continued Fraction Generators and Evaluators |
| contingency | Discrete Multivariate Probability Distributions |
| contingencytables | Statistical Analysis of Contingency Tables |
| contoureR | Contouring of Non-Regular Three-Dimensional Data |
| ContourFunctions | Create Contour Plots from Data or a Function |
| contourPlot | Plots x,y,z Co-Ordinates in a Contour Map |
| contrast | A Collection of Contrast Methods |
| contribution | A Tiny Contribution Table Generator Based on 'ggplot2' |
| control | A Control Systems Toolbox |
| controlTest | Quantile Comparison for Two-Sample Right-Censored Survival Data |
| contTimeCausal | Continuous Time Causal Models |
| convdistr | Convolute Probabilistic Distributions |
| ConvergenceClubs | Finding Convergence Clubs |
| ConvergenceConcepts | Seeing Convergence Concepts in Action |
| convergEU | Monitoring Convergence of EU Countries |
| convertGraph | Convert Graphical Files Format |
| convertid | Convert Gene IDs Between Each Other and Fetch Annotations from Biomart |
| ConvertPar | Estimating IRT Parameters via Machine Learning Algorithms |
| convertr | Convert Between Units |
| convevol | Analysis of Convergent Evolution |
| convexjlr | Disciplined Convex Programming in R using 'Convex.jl' |
| convey | Income Concentration Analysis with Complex Survey Samples |
| Convolutioner | Convolution of Data |
| convoSPAT | Convolution-Based Nonstationary Spatial Modeling |
| cooccur | Probabilistic Species Co-Occurrence Analysis in R |
| CoOL | Causes of Outcome Learning |
| cooltools | Practical Tools for Scientific Computations and Visualizations |
| coop | Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations |
| CoopGame | Important Concepts of Cooperative Game Theory |
| coopProductGame | Cooperative Aspects of Linear Production Programming Problems |
| CoordinateCleaner | Automated Cleaning of Occurrence Records from Biological Collections |
| copBasic | General Bivariate Copula Theory and Many Utility Functions |
| copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |
| CopCTS | Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits |
| cope | Coverage Probability Excursion (CoPE) Sets |
| copent | Estimating Copula Entropy and Transfer Entropy |
| CopernicusDEM | Copernicus Digital Elevation Models |
| coppeCosenzaR | COPPE-Cosenza Fuzzy Hierarchy Model |
| cops | Cluster Optimized Proximity Scaling |
| CopSens | Copula-Based Sensitivity Analysis for Observational Causal Inference |
| copula | Multivariate Dependence with Copulas |
| Copula.Markov | Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series |
| Copula.Markov.survival | Copula Markov Model with Dependent Censoring |
| Copula.surv | Analysis of Bivariate Survival Data Based on Copulas |
| CopulaCenR | Copula-Based Regression Models for Bivariate Censored Data |
| copulaData | Data Sets for Copula Modeling |
| CopulaDTA | Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies |
| copulaedas | Estimation of Distribution Algorithms Based on Copulas |
| copulareg | Copula Regression |
| CopulaREMADA | Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies |
| copyseparator | Assembling Long Gene Copies from Short Read Data |
| COR | The COR for Optimal Subset Selection in Distributed Estimation |
| cora | Cora Data for Entity Resolution |
| coRanking | Co-Ranking Matrix |
| corazon | Apply 'colorffy' Color Gradients Within 'shiny' Elements |
| Corbi | Collection of Rudimentary Bioinformatics Tools |
| CorBin | Generate High-Dimensional Binary Data with Correlation Structures |
| corclass | Correlational Class Analysis |
| cord | Community Estimation in G-Models via CORD |
| cordillera | Calculation of the OPTICS Cordillera |
| CORE | Cores of Recurrent Events |
| coreCT | Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging |
| corehunter | Multi-Purpose Core Subset Selection |
| CORElearn | Classification, Regression and Feature Evaluation |
| corels | R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner |
| coreNLP | Wrappers Around Stanford CoreNLP Tools |
| coreSim | Core Functionality for Simulating Quantities of Interest from Generalised Linear Models |
| corHMM | Hidden Markov Models of Character Evolution |
| corkscrew | Preprocessor for Data Modeling |
| corlink | Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields |
| CorMID | Correct Mass Isotopologue Distribution Vectors |
| corncob | Count Regression for Correlated Observations with the Beta-Binomial |
| CornerstoneR | Collection of Scripts for Interface Between 'Cornerstone' and 'R' |
| cornet | Elastic Net with Dichotomised Outcomes |
| coro | 'Coroutines' for R |
| coroICA | Confounding Robust Independent Component Analysis for Noisy and Grouped Data |
| corona | Coronavirus ('Rona') Data Exploration |
| coronavirus | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset |
| corpcor | Efficient Estimation of Covariance and (Partial) Correlation |
| corpora | Statistics and Data Sets for Corpus Frequency Data |
| CorporaCoCo | Corpora Co-Occurrence Comparison |
| corporaexplorer | A 'Shiny' App for Exploration of Text Collections |
| CoRpower | Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials |
| corpus | Text Corpus Analysis |
| corpustools | Managing, Querying and Analyzing Tokenized Text |
| corr2D | Implementation of 2D Correlation Analysis in R |
| corrarray | Correlation Arrays and 2-Sample Correlation Matrices |
| CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |
| corrcoverage | Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping |
| corrDNA | Finding Associations in Position-Wise Aligned DNA Sequence Dataset |
| correctedAUC | Correcting AUC for Measurement Error |
| CorrectedFDR | Correcting False Discovery Rates |
| CorrectOverloadedPeaks | Correct Overloaded Peaks from GC-APCI-MS Data |
| corregp | Functions and Methods for Correspondence Regression |
| correlation | Methods for Correlation Analysis |
| correlationfunnel | Speed Up Exploratory Data Analysis (EDA) with the Correlation Funnel |
| correlbinom | Correlated Binomial Probabilities |
| corrgram | Plot a Correlogram |
| corrgrapher | Explore Correlations Between Variables in a Machine Learning Model |
| CorrMixed | Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models |
| corrplot | Visualization of a Correlation Matrix |
| corrr | Correlations in R |
| corrsieve | Software for Summarising and Evaluating STRUCTURE Output |
| CorrToolBox | Modeling Correlational Magnitude Transformations in Discretization Contexts |
| corset | Arbitrary Bounding of Series and Time Series Objects |
| cort | Some Empiric and Nonparametric Copula Models |
| corTest | Robust Tests for Equal Correlation |
| corTESTsrd | Significance Testing of Rank Cross-Correlations under SRD |
| corto | Inference of Gene Regulatory Networks |
| corx | Create and Format Correlation Matrices |
| cosa | Bound Constrained Optimal Sample Size Allocation |
| cosinor | Tools for Estimating and Predicting the Cosinor Model |
| cosinor2 | Extended Tools for Cosinor Analysis of Rhythms |
| cosmicsig | Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer) |
| cosmoFns | Functions for Cosmological Distances, Times, Luminosities, Etc |
| CoSMoS | Complete Stochastic Modelling Solution |
| COST | Copula-Based Semiparametric Models for Spatio-Temporal Data |
| costat | Time Series Costationarity Determination |
| costsensitive | Cost-Sensitive Multi-Class Classification |
| CosW | The CosW Distribution |
| CoTiMA | Continuous Time Meta-Analysis ('CoTiMA') |
| cotram | Count Transformation Models |
| cotrend | Consistent Co-Trending Rank Selection |
| couchDB | Connect to and Work with CouchDB Databases |
| COUNT | Functions, Data and Code for Count Data |
| countcolors | Locates and Counts Pixels Within Color Range(s) in Images |
| countdata | The Beta-Binomial Test for Count Data |
| Counterfactual | Estimation and Inference Methods for Counterfactual Analysis |
| Counternull | Creating Null and Counternull Distributions to Find Counternull Values |
| countfitteR | Comprehensive Automatized Evaluation of Distribution Models for Count Data |
| countgmifs | Discrete Response Regression for High-Dimensional Data |
| countHMM | Penalized Estimation of Flexible Hidden Markov Models for Time Series of Counts |
| Countr | Flexible Univariate Count Models Based on Renewal Processes |
| countrycode | Convert Country Names and Country Codes |
| CountsEPPM | Mean and Variance Modeling of Count Data |
| countToFPKM | Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM) |
| countTransformers | Transform Counts in RNA-Seq Data Analysis |
| COUSCOus | A Residue-Residue Contact Detecting Method |
| covafillr | Local Polynomial Regression of State Dependent Covariates in State-Space Models |
| covatest | Tests on Properties of Space-Time Covariance Functions |
| covBM | Brownian Motion Processes for 'nlme'-Models |
| CovCombR | Combine Partial Covariance / Relationship Matrices |
| coveffectsplot | Produce Forest Plots to Visualize Covariate Effects |
| covequal | Test for Equality of Covariance Matrices |
| covfefe | Covfefy Any Word, Sentence or Speech |
| covglasso | Sparse Covariance Matrix Estimation |
| COVID19 | R Interface to COVID-19 Data Hub |
| covid19.analytics | Load and Analyze Live Data from the COVID-19 Pandemic |
| covid19br | Brazilian COVID-19 Pandemic Data |
| covid19brazil | COVID-19 Dataset for Brazil |
| covid19dbcand | Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format |
| covid19france | Cases of COVID-19 in France |
| covid19india | Pulling Clean Data from Covid19india.org |
| covid19italy | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset |
| covid19sf | The Covid19 San Francisco Dataset |
| covid19srilanka | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Data in Sri Lanka |
| covid19swiss | COVID-19 Cases in Switzerland and Principality of Liechtenstein |
| covid19us | Cases of COVID-19 in the United States |
| covidcast | Client for Delphi's 'COVIDcast Epidata' API |
| COVIDIBGE | Downloading, Reading and Analyzing PNAD COVID19 Microdata |
| CovidMutations | Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019) |
| covidprobability | Estimate the Unit-Wide Probability of COVID-19 |
| covidsymptom | COVID Symptom Study Sweden Open Dataset |
| covKCD | Covariance Estimation for Matrix Data with the Kronecker-Core Decomposition |
| covr | Test Coverage for Packages |
| covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |
| CovSel | Model-Free Covariate Selection |
| covsep | Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable |
| covsim | VITA, IG and PLSIM Simulation for Given Covariance and Marginals |
| covTestR | Covariance Matrix Tests |
| CovTools | Statistical Tools for Covariance Analysis |
| cowbell | Performs Segmented Linear Regression on Two Independent Variables |
| cowplot | Streamlined Plot Theme and Plot Annotations for 'ggplot2' |
| cowsay | Messages, Warnings, Strings with Ascii Animals |
| CoxBcv | Bias-Corrected Sandwich Variance Estimators for Marginal Cox Analysis of Cluster Randomized Trials |
| coxed | Duration-Based Quantities of Interest for the Cox Proportional Hazards Model |
| CoxICPen | Variable Selection for Cox's Model with Interval-Censored Data |
| coxme | Mixed Effects Cox Models |
| coxphf | Cox Regression with Firth's Penalized Likelihood |
| coxphMIC | Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion |
| coxphSGD | Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model |
| coxphw | Weighted Estimation in Cox Regression |
| CoxPlus | Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects |
| CoxR2 | R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model |
| coxrobust | Fit Robustly Proportional Hazards Regression Model |
| coxrt | Cox Proportional Hazards Regression for Right-Truncated Data |
| coxsei | Fitting a CoxSEI Model |
| CP | Conditional Power Calculations |
| cp4p | Calibration Plot for Proteomics |
| cpa | Confirmatory Path Analysis Through 'd-sep' Tests |
| CPAT | Change Point Analysis Tests |
| CPBayes | Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations |
| CPC | Implementation of Cluster-Polarization Coefficient |
| cpca | Methods to perform Common Principal Component Analysis (CPCA) |
| cPCG | Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations |
| cpd | Complex Pearson Distributions |
| cpfa | Classification with Parallel Factor Analysis |
| CpGassoc | Association Between Methylation and a Phenotype of Interest |
| CpGFilter | CpG Filtering Method Based on Intra-Class Correlation Coefficients |
| CPGLIB | Competing Proximal Gradients Library |
| cpi | Conditional Predictive Impact |
| cpk | Clinical Pharmacokinetics |
| cplm | Compound Poisson Linear Models |
| cplots | Plots for Circular Data |
| cpm | Sequential and Batch Change Detection Using Parametric and Nonparametric Methods |
| CPMCGLM | Correction of the P-Value after Multiple Coding in Generalized Linear Models |
| CPNCoverageAnalysis | Conceptual Properties Norming Studies as Parameter Estimation |
| cpop | Detection of Multiple Changes in Slope in Univariate Time-Series |
| CPP | Composition of Probabilistic Preferences (CPP) |
| cpp11 | A C++11 Interface for R's C Interface |
| cppcheckR | Check 'C' and 'C++' Files using 'Cppcheck' |
| cppRouting | Fast Implementation of Dijkstra Algorithm |
| cpr | Control Polygon Reduction |
| Cprob | The Conditional Probability Function of a Competing Event |
| cprobit | Conditional Probit Model for Analysing Continuous Outcomes |
| cprr | Functions for Working with Danish CPR Numbers |
| cPseudoMaRg | Constructs a Correlated Pseudo-Marginal Sampler |
| cpsR | Load CPS Microdata into R Using the 'Census Bureau Data' API |
| cpss | Change-Point Detection by Sample-Splitting Methods |
| CPsurv | Nonparametric Change Point Estimation for Survival Data |
| cpsurvsim | Simulating Survival Data from Change-Point Hazard Distributions |
| cpsvote | A Toolbox for Using the CPS’s Voting and Registration Supplement |
| cpt | Classification Permutation Test |
| cptcity | 'cpt-city' Colour Gradients |
| cqcr | Access 'Care Quality Commission' Data |
| cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |
| cquad | Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data |
| CR2 | Compute Cluster Robust Standard Errors with Degrees of Freedom Adjustments |
| CRABS | Congruent Rate Analyses in Birth-Death Scenarios |
| cragg | Tests for Weak Instruments in R |
| cramer | Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem |
| crandep | Network Analysis of Dependencies of CRAN Packages |
| crank | Completing Ranks |
| cranlike | Tools for 'CRAN'-Like Repositories |
| cranlogs | Download Logs from the 'RStudio' 'CRAN' Mirror |
| CRANsearcher | RStudio Addin for Searching Packages in CRAN Database Based on Keywords |
| crassmat | Conditional Random Sampling Sparse Matrices |
| crawl | Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data |
| crayon | Colored Terminal Output |
| crch | Censored Regression with Conditional Heteroscedasticity |
| crctStepdown | Univariate Analysis of Cluster Trials with Multiple Outcomes |
| CREAM | Clustering of Genomic Regions Analysis Method |
| credentials | Tools for Managing SSH and Git Credentials |
| creditmodel | Toolkit for Credit Modeling, Analysis and Visualization |
| CREDS | Calibrated Ratio Estimator under Double Sampling Design |
| credsubs | Credible Subsets |
| credule | Credit Default Swap Functions |
| cregg | Simple Conjoint Tidying, Analysis, and Visualization |
| cRegulome | Obtain and Visualize Regulome-Gene Expression Correlations in Cancer |
| crestr | A Probabilistic Approach to Reconstruct Past Climates Using Palaeoecological Datasets |
| CRF | Conditional Random Fields |
| crfsuite | Conditional Random Fields for Labelling Sequential Data in Natural Language Processing |
| cricketdata | International Cricket Data |
| cricketr | Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru |
| crimCV | Group-Based Modelling of Longitudinal Data |
| crimedata | Access Crime Data from the Open Crime Database |
| crimelinkage | Statistical Methods for Crime Series Linkage |
| crimeutils | A Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data |
| crisp | Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way |
| crispRdesignR | Guide Sequence Design for CRISPR/Cas9 |
| criticality | Modeling Fissile Material Operations in Nuclear Facilities |
| criticalpath | An Implementation of the Critical Path Method |
| critpath | Setting the Critical Path |
| CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |
| crmn | CCMN and Other Normalization Methods for Metabolomics Data |
| crmPack | Object-Oriented Implementation of CRM Designs |
| crmReg | Cellwise Robust M-Regression and SPADIMO |
| crochet | Implementation Helper for '[' and '[<-' of Custom Matrix-Like Types |
| cromwellDashboard | A Dashboard to Visualize Scientific Workflows in 'Cromwell' |
| Cronbach | Cronbach's Alpha |
| crone | Structural Crystallography in 1d |
| cronologia | Create an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny' |
| cronR | Schedule R Scripts and Processes with the 'cron' Job Scheduler |
| crop | Graphics Cropping Tool |
| cropdatape | Open Data of Agricultural Production of Crops of Peru |
| cropDemand | Spatial Crop Water Demand for Brazil |
| CropDetectR | Crop Row Detector |
| cropgrowdays | Crop Growing Degree Days and Agrometeorological Calculations |
| crops | Changepoints for a Range of Penalties (CROPS) |
| CropScapeR | Access Cropland Data Layer Data via the 'CropScape' Web Service |
| cropZoning | Climate Crop Zoning Based in Air Temperature for Brazil |
| crossdes | Construction of Crossover Designs |
| crossmap | Apply Functions to All Combinations of List Elements |
| crossnma | Cross-Design & Cross-Format Network Meta-Analysis and Regression |
| Crossover | Analysis and Search of Crossover Designs |
| crossrun | Joint Distribution of Number of Crossings and Longest Run |
| crosstable | Crosstables for Descriptive Analyses |
| crosstalk | Inter-Widget Interactivity for HTML Widgets |
| CrossVA | Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms |
| crossval | Generic Functions for Cross Validation |
| CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |
| crossvalidationCP | Cross-Validation for Change-Point Regression |
| crosswalkr | Rename and Encode Data Frames Using External Crosswalk Files |
| crossword.r | Generating Crosswords from Word Lists |
| crov | Constrained Regression Model for an Ordinal Response and Ordinal Predictors |
| crplyr | A 'dplyr' Interface for Crunch |
| crqa | Recurrence Quantification Analysis for Categorical and Continuous Time-Series |
| crrcbcv | Bias-Corrected Variance for Competing Risks Regression with Clustered Data |
| crrSC | Competing Risks Regression for Stratified and Clustered Data |
| crs | Categorical Regression Splines |
| crseEventStudy | A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies |
| crsmeta | Extract Coordinate System Metadata |
| crsnls | Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe' |
| crso | Cancer Rule Set Optimization ('crso') |
| crsra | Tidying and Analyzing 'Coursera' Research Export Data |
| crsuggest | Obtain Suggested Coordinate Reference System Information for Spatial Data |
| CRTConjoint | Conditional Randomization Testing (CRT) Approach for Conjoint Analysis |
| crtests | Classification and Regression Tests |
| CRTgeeDR | Doubly Robust Inverse Probability Weighted Augmented GEE Estimator |
| crul | HTTP Client |
| crunch | Crunch.io Data Tools |
| crunchy | Shiny Apps on Crunch |
| cruts | Interface to Climatic Research Unit Time-Series Version 3.21 Data |
| CruzPlot | Plot Shipboard DAS Data |
| CRWRM | Changing the Reference Group without Re-Running the Model |
| cry | Statistics for Structural Crystallography |
| CrypticIBDcheck | Identifying Cryptic Relatedness in Genetic Association Studies |
| crypto2 | Download Crypto Currency Data from 'CoinMarketCap' without 'API' |
| cryptoverse | Visualization and Analytics for the Cryptoverse |
| cryptowatchR | An API Wrapper for 'Cryptowatch' |
| CryptRndTest | Statistical Tests for Cryptographic Randomness |
| cryst | Calculate the Relative Crystallinity of Starch by XRD and FTIR |
| csa | A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration |
| csampling | Functions for Conditional Simulation in Regression-Scale Models |
| CSCDRNA | Covariance Based Single-Cell Decomposition of Bulk Expression Data |
| CsChange | Testing for Change in C-Statistic |
| csci | Current Status Confidence Intervals |
| CSclone | Bayesian Nonparametric Modeling in R |
| cSEM | Composite-Based Structural Equation Modeling |
| CSeqpat | Frequent Contiguous Sequential Pattern Mining of Text |
| CSESA | CRISPR-Based Salmonella Enterica Serotype Analyzer |
| CSFA | Connectivity Scores with Factor Analysis |
| CSGo | Collecting Counter Strike Global Offensive Data |
| cshapes | The CShapes 2.0 Dataset and Utilities |
| CSIndicators | Climate Services' Indicators Based on Sub-Seasonal to Decadal Predictions |
| CSMES | Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions |
| csn | Closed Skew-Normal Distribution |
| cspec | Complete Discrete Fourier Transform (DFT) and Periodogram |
| cspp | A Tool for the Correlates of State Policy Project Data |
| csppData | Data Only: The Correlates of State Policy Project Dataset |
| cssTools | Cognitive Social Structure Tools |
| cstab | Selection of Number of Clusters via Normalized Clustering Instability |
| CSTE | Covariate Specific Treatment Effect (CSTE) Curve |
| CSTools | Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales |
| csurvey | Constrained Regression for Survey Data |
| csv | Read and Write CSV Files with Selected Conventions |
| csvread | Fast Specialized CSV File Loader |
| csvwr | Read and Write CSV on the Web (CSVW) Tables and Metadata |
| csvy | Import and Export CSV Data with a YAML Metadata Header |
| cta | Contingency Table Analysis Based on ML Fitting of MPH Models |
| CTAShiny | Interactive Application for Working with Contingency Tables |
| ctbi | A Procedure to Clean, Decompose and Aggregate Timeseries |
| ctf | Read and Write Column Text Format (CTF) |
| ctgdist | Likert Category Distance Calculator |
| ctgt | Closed Testing with Globaltest for Pathway Analysis |
| cthist | Clinical Trial Registry History |
| cthreshER | Continuous Threshold Expectile Regression |
| ctl | Correlated Trait Locus Mapping |
| CTM | A Text Mining Toolkit for Chinese Document |
| ctmcd | Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data |
| ctmcmove | Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains |
| ctmle | Collaborative Targeted Maximum Likelihood Estimation |
| ctmm | Continuous-Time Movement Modeling |
| CTP | Closed Testing Procedure (CTP) |
| ctpm | Continuous-Time Phylogenetic Modeling |
| ctqr | Censored and Truncated Quantile Regression |
| ctrdata | Retrieve and Analyze Clinical Trials in Public Registers |
| ctrialsgov | Query Data from U.S. National Library of Medicine's Clinical Trials Database |
| ctrlGene | Assess the Stability of Candidate Housekeeping Genes |
| ctsem | Continuous Time Structural Equation Modelling |
| ctsemOMX | Continuous Time SEM - 'OpenMx' Based Functions |
| CTShiny | Interactive Document for Working with Classification Tree Analysis |
| CTShiny2 | Interactive Document for Working with Classification Tree Analysis |
| CTT | Classical Test Theory Functions |
| CTTinShiny | Shiny Interface for the CTT Package |
| CTTShiny | Classical Test Theory via Shiny |
| ctv | CRAN Task Views |
| CUB | A Class of Mixture Models for Ordinal Data |
| cubature | Adaptive Multivariate Integration over Hypercubes |
| cubble | A Vector Spatio-Temporal Data Structure for Data Analysis |
| cubelyr | A Data Cube 'dplyr' Backend |
| cubeview | View 3D Raster Cubes Interactively |
| cubfits | Codon Usage Bias Fits |
| cubicBsplines | Computation of a Cubic B-Spline Basis and Its Derivatives |
| cubing | Rubik's Cube Solving |
| Cubist | Rule- And Instance-Based Regression Modeling |
| cuda.ml | R Interface for the RAPIDS cuML Suite of Libraries |
| CUFF | Charles's Utility Function using Formula |
| cultevo | Tools, Measures and Statistical Tests for Cultural Evolution |
| cuml4r | R Interface for the RAPIDS cuML Suite of Libraries |
| CUMP | Analyze Multivariate Phenotypes by Combining Univariate Results |
| cumSeg | Change Point Detection in Genomic Sequences |
| cumstats | Cumulative Descriptive Statistics |
| cumulocityr | Client for the 'Cumulocity' API |
| cuperdec | Cumulative Percent Decay Curve Generator |
| cuRe | Parametric Cure Model Estimation |
| curephEM | NPMLE for Logistic-Cox Cure-Rate Model |
| curl | A Modern and Flexible Web Client for R |
| currentSurvival | Estimation of CCI and CLFS Functions |
| curry | Partial Function Application with %<%, %-<%, and %><% |
| cursr | Cursor and Terminal Manipulation |
| curstatCI | Confidence Intervals for the Current Status Model |
| curtailment | Finds Binary Outcome Designs Using Stochastic Curtailment |
| curvecomp | Multiple Curve Comparisons Using Parametric Bootstrap |
| curveDepth | Tukey Curve Depth and Distance in the Space of Curves |
| curvHDR | Filtering of Flow Cytometry Samples |
| CustomerScoringMetrics | Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers |
| customizedTraining | Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models |
| CustosAscensor | Costs Allocation for the Installation of an Elevator |
| cusum | Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance |
| cusumcharter | Easier CUSUM Control Charts |
| CUSUMdesign | Compute Decision Interval and Average Run Length for CUSUM Charts |
| cutoff | Seek the Significant Cutoff Value |
| cutpointr | Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks |
| CutpointsOEHR | Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model |
| cvam | Coarsened Variable Modeling |
| cvap | Citizen Voting Age Population |
| cvar | Compute Expected Shortfall and Value at Risk for Continuous Distributions |
| cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |
| cvCovEst | Cross-Validated Covariance Matrix Estimation |
| cvcrand | Efficient Design and Analysis of Cluster Randomized Trials |
| CVD | Color Vision Deficiencies |
| CVEK | Cross-Validated Kernel Ensemble |
| cvequality | Tests for the Equality of Coefficients of Variation from Multiple Groups |
| cvGEE | Cross-Validated Predictions from GEE |
| CVglasso | Lasso Penalized Precision Matrix Estimation |
| cvmdisc | Cramer von Mises Tests for Discrete or Grouped Distributions |
| cvmgof | Cramer-von Mises Goodness-of-Fit Tests |
| cvms | Cross-Validation for Model Selection |
| CVR | Canonical Variate Regression |
| CVrisk | Compute Risk Scores for Cardiovascular Diseases |
| cvsem | SEM Model Comparison with K-Fold Cross-Validation |
| CVST | Fast Cross-Validation via Sequential Testing |
| CVThresh | Level-Dependent Cross-Validation Thresholding |
| cvTools | Cross-validation tools for regression models |
| cvwrapr | Tools for Cross Validation |
| CVXR | Disciplined Convex Optimization |
| cxhull | Convex Hull |
| cxr | A Toolbox for Modelling Species Coexistence in R |
| cxxfunplus | Extend 'cxxfunction' by Saving the Dynamic Shared Objects |
| cycleRtools | Tools for Cycling Data Analysis |
| cyclestreets | Cycle Routing and Data for Cycling Advocacy |
| cyclocomp | Cyclomatic Complexity of R Code |
| cycloids | cycloids |
| cyclomort | Survival Modeling with a Periodic Hazard Function |
| Cyclops | Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis |
| cyjShiny | Cytoscape.js Shiny Widget (cyjShiny) |
| cylcop | Circular-Linear Copulas with Angular Symmetry for Movement Data |
| cymruservices | Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services |
| cyphr | High Level Encryption Wrappers |
| cystiSim | Agent-Based Model for Taenia_solium Transmission and Control |
| CytobankAPI | Cytobank API Wrapper for R |
| CytobankBridgeR | Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application |
| cytofan | Plot Fan Plots for Cytometry Data using 'ggplot2' |
| cytometree | Automated Cytometry Gating and Annotation |
| cytominer | Methods for Image-Based Cell Profiling |
| CytOpT | Optimal Transport for Gating Transfer in Cytometry Data with Domain Adaptation |
| czechrates | Czech Interest & Foreign Exchange Rates |
| czso | Use Open Data from the Czech Statistical Office in R |
| D2MCS | Data Driving Multiple Classifier System |
| D3GB | Interactive Genome Browser with R |
| d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |
| D3partitionR | Interactive Charts of Nested and Hierarchical Data with 'D3.js' |
| d3plus | Seamless 'D3Plus' Integration |
| d3po | Fast and Beautiful Interactive Visualization for 'Markdown' and 'Shiny' |
| d3r | 'd3.js' Utilities for R |
| d3Tree | Create Interactive Collapsible Trees with the JavaScript 'D3' Library |
| d4storagehub4R | Interface to 'D4Science' 'StorageHub' API |
| DA | Discriminant Analysis for Evolutionary Inference |
| DAAG | Data Analysis and Graphics Data and Functions |
| DAAGbio | Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences |
| daarem | Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms |
| dabestr | Data Analysis using Bootstrap-Coupled Estimation |
| dabr | Database Management with R |
| DACF | Data Analysis with Ceiling and/or Floor Data |
| dad | Three-Way / Multigroup Data Analysis Through Densities |
| dadjoke | Displays a Dad Joke |
| dadjokeapi | Return a Random Dad Joke |
| dados | Translate Datasets to Portuguese |
| dae | Functions Useful in the Design and ANOVA of Experiments |
| daewr | Design and Analysis of Experiments with R |
| daff | Diff, Patch and Merge for Data.frames |
| dafs | Data Analysis for Forensic Scientists |
| dagirlite | Spatial Vector Data for Danmarks Administrative Geografiske Inddeling DAGI |
| dagitty | Graphical Analysis of Structural Causal Models |
| dagR | R Functions for Directed Acyclic Graphs |
| dagwood | DAGs with Omitted Objects Displayed (DAGWOOD) |
| dail | Data from Access to Information Law |
| DAIME | Effects of Changing Deposition Rates |
| daiR | Interface with Google Cloud Document AI API |
| DAISIE | Dynamical Assembly of Islands by Speciation, Immigration and Extinction |
| DAKS | Data Analysis and Knowledge Spaces |
| DALEX | moDel Agnostic Language for Exploration and eXplanation |
| DALEXtra | Extension for 'DALEX' Package |
| dalmatian | Automating the Fitting of Double Linear Mixed Models in 'JAGS' and 'nimble' |
| DALY | The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R |
| dam | Data Analysis Metabolomics |
| DamiaNN | Neural Network Numerai |
| DAMisc | Dave Armstrong's Miscellaneous Functions |
| DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |
| dampack | Decision-Analytic Modeling Package |
| damr | Interface to Drosophila Activity Monitor System Result Files |
| dams | Dams in the United States from the National Inventory of Dams (NID) |
| DandEFA | Dandelion Plot for R-Mode Exploratory Factor Analysis |
| dang | 'Dang' Associated New Goodies |
| dani | Design and Analysis of Non-Inferiority Trials |
| DanielBiostatistics10th | Functions for Wayne W. Daniel's Biostatistics, Tenth Edition |
| dann | Discriminant Adaptive Nearest Neighbor Classification |
| danstat | R Client for the Statistics Denmark Databank API |
| DAP | Discriminant Analysis via Projections |
| dapr | 'purrr'-Like Apply Functions Over Input Elements |
| daqapo | Data Quality Assessment for Process-Oriented Data |
| DArand | Differential Analysis with Random Reference Genes |
| Dark | The Analysis of Dark Adaptation Data |
| DarkDiv | Estimating Dark Diversity and Site-Specific Species Pools |
| darksky | Tools to Work with the 'Dark Sky' 'API' |
| dartR | Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis |
| dashboardthemes | Customise the Appearance of 'shinydashboard' Applications using Themes |
| dashCoreComponents | Core Interactive UI Components for 'Dash' |
| dashHtmlComponents | Vanilla HTML Components for 'Dash' |
| dashPivottable | Interactive React-Based Pivot Tables for Dash |
| dashTable | Core Interactive Table Component for 'dash' |
| Dasst | Tools for Reading, Processing and Writing 'DSSAT' Files |
| dat | Tools for Data Manipulation |
| data.table | Extension of 'data.frame' |
| data.tree | General Purpose Hierarchical Data Structure |
| data.validator | Automatic Data Validation and Reporting |
| data360r | Wrapper for 'TCdata360' and 'Govdata360' API |
| DatabaseConnector | Connecting to Various Database Platforms |
| DatabaseConnectorJars | JAR Dependencies for the 'DatabaseConnector' Package |
| DatabionicSwarm | Swarm Intelligence for Self-Organized Clustering |
| DataClean | Data Cleaning |
| datacleanr | Interactive and Reproducible Data Cleaning |
| DataCombine | Tools for Easily Combining and Cleaning Data Sets |
| dataCompareR | Compare Two Data Frames and Summarise the Difference |
| datadictionary | Create a Data Dictionary |
| datadogr | R Client for 'Datadog' API |
| DataEditR | An Interactive Editor for Viewing, Entering, Filtering & Editing Data |
| DataExplorer | Automate Data Exploration and Treatment |
| DataFakeR | Generate Fake Data for Relational Databases |
| dataframeexplorer | Familiarity with Dataframes Before Data Manipulation |
| dataframes2xls | Write Data Frames to Xls Files |
| datafsm | Estimating Finite State Machine Models from Data |
| datagovindia | Data.gov.in API Wrapper |
| DataGraph | Export Data from R so 'DataGraph' can Read it |
| DataLoader | Import Multiple File Types |
| dataMaid | A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process |
| dataMeta | Create and Append a Data Dictionary for an R Dataset |
| datamods | Modules to Import and Manipulate Data in 'Shiny' |
| datanugget | Create, Refine, and Cluster Data Nuggets |
| dataonderivatives | Easily Source Publicly Available Data on Derivatives |
| dataone | R Interface to the DataONE REST API |
| datapack | A Flexible Container to Transport and Manipulate Data and Associated Resources |
| datapasta | R Tools for Data Copy-Pasta |
| dataprep | Efficient and Flexible Data Preprocessing Tools |
| dataPreparation | Automated Data Preparation |
| dataquieR | Data Quality in Epidemiological Research |
| datardis | Data from the Doctor Who Series |
| dataReporter | Reproducible Data Screening Checks and Report of Possible Errors |
| dataresqc | C3S Quality Control Tools for Historical Climate Data |
| dataRetrieval | Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data |
| datarium | Data Bank for Statistical Analysis and Visualization |
| datarobot | 'DataRobot' Predictive Modeling API |
| datasailr | Row by Row Data Processing Tool, Using 'DataSailr' Script |
| datasauRus | Datasets from the Datasaurus Dozen |
| dataseries | Switzerland's Data Series in One Place |
| datasets.load | Graphical Interface for Loading Datasets |
| datasetsICR | Datasets from the Book "An Introduction to Clustering with R" |
| DataSpaceR | Interface to 'the CAVD DataSpace' |
| dataspice | Create Lightweight Schema.org Descriptions of Data |
| DatAssim | Data Assimilation |
| datastepr | An Implementation of a SAS-Style Data Step |
| DatastreamDSWS2R | Provides a Link Between the 'Refinitiv Datastream' System and R |
| datastructures | Implementation of Core Data Structures |
| DATAstudio | The Research Data Warehouse of Miguel de Carvalho |
| dataverse | Client for Dataverse 4+ Repositories |
| DataVisualizations | Visualizations of High-Dimensional Data |
| DataViz | Data Visualisation Using an HTML Page and 'D3.js' |
| datawizard | Easy Data Wrangling and Statistical Transformations |
| datazoom.amazonia | Simplify Access to Data from the Amazon Region |
| date | Functions for Handling Dates |
| datefixR | Standardize Dates in Different Formats or with Missing Data |
| datelife | Scientific Data on Time of Lineage Divergence for Your Taxa |
| daterangepicker | Create a Shiny Date-Range Input |
| datetime | Nominal Dates, Times, and Durations |
| datetimeutils | Utilities for Dates and Times |
| dateutils | Date Utils |
| datoramar | Interface to the 'Datorama' API |
| datos | Traduce al Español Varios Conjuntos de Datos de Práctica |
| datplot | Preparation of Object Dating Ranges for Density Plots (Aoristic Analysis) |
| datr | 'Dat' Protocol Interface |
| datrProfile | Column Profile for Tables and Datasets |
| dauphin | Compact Standard for Australian Phone Numbers |
| dave | Functions for "Data Analysis in Vegetation Ecology" |
| Davies | The Davies Quantile Function |
| dawai | Discriminant Analysis with Additional Information |
| daymetr | Interface to the 'Daymet' Web Services |
| daySupply | Calculating Days' Supply and Daily Dose of Prescriptions |
| dbarts | Discrete Bayesian Additive Regression Trees Sampler |
| dbcsp | Distance-Based Common Spatial Patterns |
| dbd | Discretised Beta Distribution |
| DBEST | Detecting Breakpoints and Estimating Segments in Trend |
| DBfit | A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors |
| dbflobr | Read and Write Files to SQLite Databases |
| dbglm | Generalised Linear Models by Subsampling and One-Step Polishing |
| dbhydroR | 'DBHYDRO' Hydrologic and Water Quality Data |
| DBI | R Database Interface |
| DBItest | Testing DBI Backends |
| dblcens | Compute the NPMLE of distribution from doubly censored data |
| dBlockmodeling | Deterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks |
| dblr | Discrete Boosting Logistic Regression |
| dbMC | Confidence Interval for Matrix Completion via De-Biased Estimator |
| dbmss | Distance-Based Measures of Spatial Structures |
| dbnlearn | Dynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting |
| DBNMFrank | Rank Selection for Non-Negative Matrix Factorization |
| dbnR | Dynamic Bayesian Network Learning and Inference |
| dbparser | 'DrugBank' Database XML Parser |
| dbplot | Simplifies Plotting Data Inside Databases |
| dbplyr | A 'dplyr' Back End for Databases |
| DBpower | Finite Sample Power Calculations for Detection Boundary Tests |
| DBR | Discrete Beta Regression |
| dbscan | Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
| dbstats | Distance-Based Statistics |
| dbWebForms | Produce R Functions to Create HTML Forms Based on SQL Meta Data |
| dbx | A Fast, Easy-to-Use Database Interface |
| dc3net | Inferring Condition-Specific Networks via Differential Network Inference |
| DCA | Dynamic Correlation Analysis for High Dimensional Data |
| DCCA | Detrended Fluctuation and Detrended Cross-Correlation Analysis |
| DCchoice | Analyzing Dichotomous Choice Contingent Valuation Data |
| dccmidas | DCC Models with GARCH-MIDAS Specifications in the Univariate Step |
| dccpp | Fast Computation of Distance Correlations |
| dccvalidator | Metadata Validation for Data Coordinating Centers |
| DCD | Differential Community Detection in Paired Biological Networks |
| DCEM | Clustering Big Data using Expectation Maximization Star (EM*) Algorithm |
| DCEmgmt | DCE Data Reshaping and Processing |
| DCEtool | Efficient and Accessible Discrete Choice Experiments |
| DCG | Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis |
| dcGOR | Analysis of Ontologies and Protein Domain Annotations |
| DChaos | Chaotic Time Series Analysis |
| dChipIO | Methods for Reading dChip Files |
| dcifer | Genetic Relatedness Between Polyclonal Infections |
| DCL | Claims Reserving under the Double Chain Ladder Model |
| DCLEAR | Distance Based Cell Lineage Reconstruction |
| dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |
| dclust | Divisive Hierarchical Clustering |
| DCluster | Functions for the Detection of Spatial Clusters of Diseases |
| DClusterm | Model-Based Detection of Disease Clusters |
| dcmle | Hierarchical Models Made Easy with Data Cloning |
| dcmodify | Modify Data Using Externally Defined Modification Rules |
| dcmodifydb | Modifying Rules on a DataBase |
| DCODE | List Linear n-Peptide Constraints for Overlapping Protein Regions |
| dcov | A Fast Implementation of Distance Covariance |
| dCovTS | Distance Covariance and Correlation for Time Series Analysis |
| DCPO | Dynamic Comparative Public Opinion |
| DCSmooth | Nonparametric Regression and Bandwidth Selection for Spatial Models |
| dCUR | Dimension Reduction with Dynamic CUR |
| dcurver | Utility Functions for Davidian Curves |
| dcurves | Decision Curve Analysis for Model Evaluation |
| ddalpha | Depth-Based Classification and Calculation of Data Depth |
| DDD | Diversity-Dependent Diversification |
| dde | Solve Delay Differential Equations |
| DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |
| ddi | The Data Defect Index for Samples that May not be IID |
| ddiv | Data Driven I-v Feature Extraction |
| DDIwR | DDI with R |
| DDL | Doubly Debiased Lasso (DDL) |
| DDM | Death Registration Coverage Estimation |
| DDoutlier | Distance & Density-Based Outlier Detection |
| ddp | Desirable Dietary Pattern |
| ddpca | Diagonally Dominant Principal Component Analysis |
| ddpcr | Analysis and Visualization of Droplet Digital PCR in R and on the Web |
| DDPNA | Disease-Drived Differential Proteins Co-Expression Network Analysis |
| DDRTree | Learning Principal Graphs with DDRTree |
| ddst | Data Driven Smooth Tests |
| deadband | Statistical Deadband Algorithms Comparison |
| deal | Learning Bayesian Networks with Mixed Variables |
| deaR | Conventional and Fuzzy Data Envelopment Analysis |
| debar | A Post-Clustering Denoiser for COI-5P Barcode Data |
| DEBBI | Differential Evolution-Based Bayesian Inference |
| deBif | Bifurcation Analysis of Ordinary Differential Equation Systems |
| deBInfer | Bayesian Inference for Differential Equations |
| debugme | Debug R Packages |
| debugr | Debug Tool to Watch Objects/Expressions While Running an R Script |
| DeCAFS | Detecting Changes in Autocorrelated and Fluctuating Signals |
| DECIDE | DEComposition of Indirect and Direct Effects |
| decido | Bindings for 'Mapbox' Ear Cutting Triangulation Library |
| decision | Statistical Decision Analysis |
| decisionSupport | Quantitative Support of Decision Making under Uncertainty |
| deckgl | An R Interface to 'deck.gl' |
| declared | Functions to Declare Missing Values |
| DeclareDesign | Declare and Diagnose Research Designs |
| decode | Differential Co-Expression and Differential Expression Analysis |
| decoder | Decode Coded Variables to Plain Text and the Other Way Around |
| decomposedPSF | Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD) |
| DecomposeR | Empirical Mode Decomposition for Cyclostratigraphy |
| decompr | Global Value Chain Decomposition |
| decon | Deconvolution Estimation in Measurement Error Models |
| deconstructSigs | Identifies Signatures Present in a Tumor Sample |
| deconvolveR | Empirical Bayes Estimation Strategies |
| decor | Retrieve Code Decorations |
| DecorateR | Fit and Deploy DECORATE Trees |
| decorators | Extend the Behaviour of a Function without Explicitly Modifying it |
| Deducer | A Data Analysis GUI for R |
| deducorrect | Deductive Correction, Deductive Imputation, and Deterministic Correction |
| deductive | Data Correction and Imputation Using Deductive Methods |
| DeductiveR | Deductive Rational Method |
| dedupewider | Deduplication Across Multiple Columns |
| deep | A Neural Networks Framework |
| deepboost | Deep Boosting Ensemble Modeling |
| deepdep | Visualise and Explore the Deep Dependencies of R Packages |
| deepdive | Deep Learning for General Purpose |
| deepgmm | Deep Gaussian Mixture Models |
| deepgp | Deep Gaussian Processes using MCMC |
| deeplr | Interface to the 'DeepL' Translation API |
| deepMOU | Clustering of Short Texts by Mixture of Unigrams and Its Deep Extensions |
| deepnet | Deep Learning Toolkit in R |
| deepNN | Deep Learning |
| deepredeff | Deep Learning Prediction of Effectors |
| deepregression | Fitting Deep Distributional Regression |
| deeptime | Plotting Tools for Anyone Working in Deep Time |
| DEET | Differential Expression Enrichment Tool |
| DEEVD | Density Estimation by Extreme Value Distributions |
| default | Change the Default Arguments in R Functions |
| deflateBR | Deflate Nominal Brazilian Reais |
| deforestable | Classify RGB Images into Forest or Non-Forest |
| deformula | Integration of One-Dimensional Functions with Double Exponential Formulas |
| degreenet | Models for Skewed Count Distributions Relevant to Networks |
| degross | Density Estimation from GROuped Summary Statistics |
| dejaVu | Multiple Imputation for Recurrent Events |
| Delaporte | Statistical Functions for the Delaporte Distribution |
| delaunay | 2d, 2.5d, and 3d Delaunay Tessellations |
| delayed | A Framework for Parallelizing Dependent Tasks |
| DelayedEffect.Design | Sample Size and Power Calculations using the APPLE and SEPPLE Methods |
| deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |
| DeLorean | Estimates Pseudotimes for Single Cell Expression Data |
| Delta | Measure of Agreement Between Two Raters |
| deltaccd | Quantify Rhythmic Gene Co-Expression Relative to a Reference |
| DeltaMAN | Delta Measurement of Agreement for Nominal Data |
| deltaPlotR | Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method |
| DELTD | Kernel Density Estimation using Lifetime Distributions |
| DEM | The Distributed EM Algorithms in Multivariate Gaussian Mixture Models |
| dematel | Decision Making Trial and Evaluation Laboratory Technique in R |
| deming | Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |
| DemoDecomp | Decompose Demographic Functions |
| demodelr | Simulating Differential Equations with Data |
| demogR | Analysis of Age-Structured Demographic Models |
| DemografixeR | Extrapolate Gender, Age and Nationality of a Name |
| demoGraphic | Providing Demographic Table with the P-Value, Standardized Mean Difference Value |
| DemographicTable | Creating Demographic Table |
| demography | Forecasting Mortality, Fertility, Migration and Population Data |
| demoKde | Kernel Density Estimation for Demonstration Purposes |
| demoShiny | Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps |
| DEMOVA | DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set |
| demu | Optimal Design Emulators via Point Processes |
| dendextend | Extending 'dendrogram' Functionality in R |
| dendRoAnalyst | A Tool for Processing and Analyzing Dendrometer Data |
| dendroextras | Extra Functions to Cut, Label and Colour Dendrogram Clusters |
| DendroSync | A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies |
| dendroTools | Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data |
| DendSer | Dendrogram Seriation: Ordering for Visualisation |
| dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |
| denoiSeq | Differential Expression Analysis Using a Bottom-Up Model |
| denoiseR | Regularized Low Rank Matrix Estimation |
| denovolyzeR | Statistical Analyses of De Novo Genetic Variants |
| denseFLMM | Functional Linear Mixed Models for Densely Sampled Data |
| densEstBayes | Density Estimation via Bayesian Inference Engines |
| densitr | Analysing Density Profiles from Resistance Drilling of Trees |
| densityClust | Clustering by Fast Search and Find of Density Peaks |
| DensParcorr | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks |
| densratio | Density Ratio Estimation |
| denstrip | Density Strips and Other Methods for Compactly Illustrating Distributions |
| denvax | Simple Dengue Test and Vaccinate Cost Thresholds |
| DEoptim | Global Optimization by Differential Evolution |
| DEoptimR | Differential Evolution Optimization in Pure R |
| depcache | Cache R Expressions, Taking Their Dependencies into Account |
| DepCens | Dependent Censoring Regression Models |
| depcoeff | Dependency Coefficients |
| depend.truncation | Statistical Methods for the Analysis of Dependently Truncated Data |
| depigner | A Utility Package to Help you Deal with "Pignas" |
| DepLogo | Dependency Logo |
| depmix | Dependent Mixture Models |
| depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
| DEPONS2R | Read, Plot and Analyse Output from the DEPONS Model |
| depth | Nonparametric Depth Functions for Multivariate Analysis |
| depth.plot | Multivariate Analogy of Quantiles |
| DepthProc | Statistical Depth Functions for Multivariate Analysis |
| depthTools | Depth Tools Package |
| dequer | Stacks, Queues, and 'Deques' for R |
| DeRezende.Ferreira | Zero Coupon Yield Curve Modelling |
| Deriv | Symbolic Differentiation |
| derivmkts | Functions and R Code to Accompany Derivatives Markets |
| DES | Discrete Event Simulation |
| desc | Manipulate DESCRIPTION Files |
| descomponer | Seasonal Adjustment by Frequency Analysis |
| descr | Descriptive Statistics |
| describedata | Miscellaneous Descriptive Functions |
| DescribeDisplay | An Interface to the 'DescribeDisplay' 'GGobi' Plugin |
| describer | Describe Data in R Using Common Descriptive Statistics |
| DescriptiveStats.OBeu | Descriptive Statistics 'OpenBudgets.eu' |
| DescriptiveWH | Descriptive Statistics |
| descriptr | Generate Descriptive Statistics |
| DescrTab2 | Publication Quality Descriptive Statistics Tables |
| descstat | Tools for Descriptive Statistics |
| descstatsr | Descriptive Univariate Statistics |
| desctable | Produce Descriptive and Comparative Tables Easily |
| DescTools | Tools for Descriptive Statistics |
| DescToolsAddIns | Interactive Functions to be Used as Shortcuts in 'RStudio' |
| DesignCTPB | Design Clinical Trials with Potential Biomarker Effect |
| designer | 'Shiny' UI Prototype Builder |
| DesignLibrary | Library of Research Designs |
| designmatch | Matched Samples that are Balanced and Representative by Design |
| designr | Balanced Factorial Designs |
| designsize | Sample Size Calculation of Various Study Designs |
| desiR | Desirability Functions for Ranking, Selecting, and Integrating Data |
| desirability | Function Optimization and Ranking via Desirability Functions |
| desla | Desparsified Lasso |
| deSolve | Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
| desplot | Plotting Field Plans for Agricultural Experiments |
| details | Create Details HTML Tag for Markdown and Package Documentation |
| detect | Analyzing Wildlife Data with Detection Error |
| detectnorm | Detect Nonnormality in Meta-Analysis without Raw Data |
| detector | Detect Data Containing Personally Identifiable Information |
| detectR | Change Point Detection |
| detectRUNS | Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes |
| detectseparation | Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
| deTestSet | Test Set for Differential Equations |
| DetLifeInsurance | Life Insurance Premium and Reserves Valuation |
| DetMCD | Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |
| detourr | Portable and Performant Tour Animations |
| detpack | Density Estimation and Random Number Generation with Distribution Element Trees |
| DetR | Suite of Deterministic and Robust Algorithms for Linear Regression |
| detrendeR | A Graphical User Interface (GUI) to Visualize and Analyze Dendrochronological Data |
| detrendr | Detrend Images |
| deTS | Tissue-Specific Enrichment Analysis |
| DetSel | A Computer Program to Detect Markers Responding to Selection |
| detzrcr | Compare Detrital Zircon Suites |
| devEMF | EMF Graphics Output Device |
| devFunc | Clear and Condense Argument Check for User-Defined Functions |
| devoid | A Graphic Device that Does Nothing |
| Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |
| devRate | Quantify the Relationship Between Development Rate and Temperature in Ectotherms |
| devtoolbox | Tools for the R Developer |
| devtools | Tools to Make Developing R Packages Easier |
| DevTreatRules | Develop Treatment Rules with Observational Data |
| dexter | Data Management and Analysis of Tests |
| dextergui | A Graphical User Interface for Dexter |
| dexterMST | CML and Bayesian Calibration of Multistage Tests |
| DFA | Detrended Fluctuation Analysis |
| DFA.CANCOR | Linear Discriminant Function and Canonical Correlation Analysis |
| dfadjust | Degrees of Freedom Adjustment for Robust Standard Errors |
| dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |
| dfCompare | Compare Two Dataframes and Return Adds, Changes, and Deletes |
| dfcrm | Dose-Finding by the Continual Reassessment Method |
| dfidx | Indexed Data Frames |
| DFIT | Differential Functioning of Items and Tests |
| dfmeta | Meta-Analysis of Phase I Dose-Finding Early Clinical Trials |
| dfmta | Phase I/II Adaptive Dose-Finding Design for MTA |
| dfoliatR | Detection and Analysis of Insect Defoliation Signals in Tree Rings |
| dfoptim | Derivative-Free Optimization |
| Dforest | Decision Forest |
| dformula | Data Manipulation using Formula |
| dfped | Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies |
| dfphase1 | Phase I Control Charts (with Emphasis on Distribution-Free Methods) |
| dfpk | Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials |
| dfvad | Diewert and Fox's Method of Value Added Growth Decomposition |
| dga | Capture-Recapture Estimation using Bayesian Model Averaging |
| dGAselID | Genetic Algorithm with Incomplete Dominance for Feature Selection |
| DGCA | Differential Gene Correlation Analysis |
| DGEobj | Differential Gene Expression (DGE) Analysis Results Data Object |
| DGEobj.utils | Differential Gene Expression (DGE) Analysis Utility Toolkit |
| dglars | Differential Geometric Least Angle Regression |
| dglm | Double Generalized Linear Models |
| DGLMExtPois | Double Generalized Linear Models Extending Poisson Regression |
| DGM | Dynamic Graphical Models |
| dgof | Discrete Goodness-of-Fit Tests |
| dgumbel | The Gumbel Distribution Functions and Gradients |
| DHARMa | Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
| DHBins | Hexmaps for NZ District Health Boards |
| dhga | Differential Hub Gene Analysis |
| dhglm | Double Hierarchical Generalized Linear Models |
| dhh | A Heavy-Headed Distribution |
| dhReg | Dynamic Harmonic Regression |
| DHS.rates | Calculates Demographic Indicators |
| dHSIC | Independence Testing via Hilbert Schmidt Independence Criterion |
| di | Deficit Index (DI) |
| diagis | Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling |
| diagmeta | Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints |
| diagonals | Block Diagonal Extraction or Replacement |
| diagram | Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
| DiagrammeR | Graph/Network Visualization |
| DiagrammeRsvg | Export DiagrammeR Graphviz Graphs as SVG |
| DiallelAnalysisR | Diallel Analysis with R |
| dialr | Parse, Format, and Validate International Phone Numbers |
| dialrjars | Required 'libphonenumber' jars for the 'dialr' Package |
| dials | Tools for Creating Tuning Parameter Values |
| diaplt | Beads Summary Plot of Ranges |
| diathor | Calculate Ecological Information and Diatom Based Indices |
| dibble | Dimensional Data Frames |
| dice | Calculate probabilities of various dice-rolling events |
| DiceDesign | Designs of Computer Experiments |
| DiceEval | Construction and Evaluation of Metamodels |
| DiceKriging | Kriging Methods for Computer Experiments |
| DiceOptim | Kriging-Based Optimization for Computer Experiments |
| diceR | Diverse Cluster Ensemble in R |
| DiceView | Methods for Visualization of Computer Experiments Design and Surrogate |
| dichromat | Color Schemes for Dichromats |
| DICOMread | Reading and Saving DICOM Image Files |
| DIconvex | Finding Patterns of Monotonicity and Convexity in Data |
| Dict | R6 Based Key-Value Dictionary Implementation |
| dictionar6 | R6 Dictionary Interface |
| dictionaRy | Retrieve the Dictionary Definitions of English Words |
| did | Treatment Effects with Multiple Periods and Groups |
| did2s | Two-Stage Difference-in-Differences Following Gardner (2021) |
| DidacticBoost | A Simple Implementation and Demonstration of Gradient Boosting |
| Diderot | Bibliographic Network Analysis |
| didimputation | Imputation Estimator from Borusyak, Jaravel, and Spiess (2021) |
| DIDmultiplegt | Estimation in DID with Multiple Groups and Periods |
| didrooRFM | Compute Recency Frequency Monetary Scores for your Customer Data |
| dief | Metrics for Continuous Efficiency |
| diemr | Diagnostic Index Expectation Maximisation in R |
| dietr | Diet Estimated Trophic Levels |
| diezeit | R Interface to the ZEIT ONLINE Content API |
| DIFboost | Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques |
| difconet | Differential Coexpressed Networks |
| diffcor | Fisher's z-Tests Concerning Difference of Correlations |
| DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |
| diffdf | Dataframe Difference Tool |
| diffdfs | Compute the Difference Between Data Frames |
| diffee | Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure |
| diffEnrich | Given a List of Gene Symbols, Performs Differential Enrichment Analysis |
| diffeqr | Solving Differential Equations (ODEs, SDEs, DDEs, DAEs) |
| diffeR | Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables |
| diffeRenTES | Computation of TES-Based Cell Differentiation Trees |
| diffIRT | Diffusion IRT Models for Response and Response Time Data |
| diffmatchpatch | String Diff, Match, and Patch Utilities |
| diffMeshGP | Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model |
| DiffNet | Detection of Statistically Significant Changes in Complex Biological Networks |
| diffobj | Diffs for R Objects |
| diffpriv | Easy Differential Privacy |
| diffr | Display Differences Between Two Files using Codediff Library |
| diffudist | Diffusion Distance for Complex Networks |
| diffusion | Forecast the Diffusion of New Products |
| diffusionMap | Diffusion Map |
| diffusr | Network Diffusion Algorithms |
| diffviewer | HTML Widget to Show File Differences |
| DiffXTables | Pattern Analysis Across Contingency Tables |
| DIFlasso | A Penalty Approach to Differential Item Functioning in Rasch Models |
| difNLR | DIF and DDF Detection by Non-Linear Regression Models |
| DIFplus | Multilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection |
| difR | Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF) |
| DIFshiny | Differential Item Functioning via Shiny Application |
| DIFtree | Item Focussed Trees for the Identification of Items in Differential Item Functioning |
| digest | Create Compact Hash Digests of R Objects |
| digiRhythm | Analyzing Animal's Rhythmicity |
| digitalDLSorteR | Deconvolution of Bulk RNA-Seq Data Based on Deep Learning |
| digitalPCR | Estimate Copy Number for Digital PCR |
| digitize | Use Data from Published Plots in R |
| digitTests | Tests for Detecting Irregular Digit Patterns |
| DIGSS | Determination of Intervals Using Georeferenced Survey Simulation |
| DIME | Differential Identification using Mixture Ensemble |
| dimensio | Multivariate Data Analysis |
| dimensionalAnalysis | Dimensional Analysis |
| dimensionsR | Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API |
| DImodels | Diversity-Interactions (DI) Models |
| DIMORA | Diffusion Models R Analysis |
| dimRed | A Framework for Dimensionality Reduction |
| dina | Bayesian Estimation of DINA Model |
| dinamic | DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors |
| DiNAMIC.Duo | Finding Recurrent DNA Copy Number Alterations and Differences |
| dineq | Decomposition of (Income) Inequality |
| dineR | Differential Network Estimation in R |
| dint | A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates |
| DiPALM | Differential Pattern Analysis via Linear Modeling |
| DiPhiSeq | Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data |
| dipm | Depth Importance in Precision Medicine (DIPM) Method |
| diproperm | Conduct Direction-Projection-Permutation Tests and Display Plots |
| DiPs | Directional Penalties for Optimal Matching in Observational Studies |
| dipsaus | A Dipping Sauce for Data Analysis and Visualizations |
| diptest | Hartigan's Dip Test Statistic for Unimodality - Corrected |
| dipw | Debiased Inverse Propensity Score Weighting |
| Dire | Linear Regressions with a Latent Outcome Variable |
| DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |
| DirectedClustering | Directed Weighted Clustering Coefficient |
| DirectEffects | Estimating Controlled Direct Effects for Explaining Causal Findings |
| Directional | A Collection of Functions for Directional Data Analysis |
| directlabels | Direct Labels for Multicolor Plots |
| directotree | Creates an Interactive Tree Structure of a Directory |
| directPA | Direction Analysis for Pathways and Kinases |
| DirectStandardisation | Adjusted Means and Proportions by Direct Standardisation |
| dirichletprocess | Build Dirichlet Process Objects for Bayesian Modelling |
| DirichletReg | Dirichlet Regression |
| dirmcmc | Directional Metropolis Hastings Algorithm |
| dirmult | Estimation in Dirichlet-Multinomial Distribution |
| DirStats | Nonparametric Methods for Directional Data |
| disaggR | Two-Steps Benchmarks for Time Series Disaggregation |
| DisaggregateTS | High-Dimensional Temporal Disaggregation |
| disaggregation | Disaggregation Modelling |
| disastr.api | Wrapper for the UN OCHA ReliefWeb Disaster Events API |
| discAUC | Linear and Non-Linear AUC for Discounting Data |
| DIscBIO | A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics |
| discfrail | Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties |
| discgolf | Discourse API Client |
| discharge | Fourier Analysis of Discharge Data |
| disclap | Discrete Laplace Exponential Family |
| disclapmix | Discrete Laplace Mixture Inference using the EM Algorithm |
| discnorm | Test for Discretized Normality in Ordinal Data |
| disco | Discordance and Concordance of Transcriptomic Responses |
| discord | Functions for Discordant Kinship Modeling |
| discourseGT | Analyze Group Patterns using Graph Theory in Educational Settings |
| discoveR | Exploratory Data Analysis System |
| discoverableresearch | Checks Title, Abstract and Keywords to Optimise Discoverability |
| discretecdAlgorithm | Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks |
| DiscreteFDR | Multiple Testing Procedures with Adaptation for Discrete Tests |
| discretefit | Simulated Goodness-of-Fit Tests for Discrete Distributions |
| DiscreteInverseWeibull | Discrete Inverse Weibull Distribution |
| DiscreteLaplace | Discrete Laplace Distributions |
| DiscreteQvalue | Improved q-Values for Discrete Uniform and Homogeneous Tests |
| discreteRV | Create and Manipulate Discrete Random Variables |
| DiscreteWeibull | Discrete Weibull Distributions (Type 1 and 3) |
| discretization | Data Preprocessing, Discretization for Classification |
| discrim | Model Wrappers for Discriminant Analysis |
| discSurv | Discrete Time Survival Analysis |
| disdat | Data for Comparing Species Distribution Modeling Methods |
| diseq | Estimation Methods for Markets in Equilibrium and Disequilibrium |
| Disequilibrium | Disequilibrium Models |
| DisHet | Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples |
| DisimForMixed | Calculate Dissimilarity Matrix for Dataset with Mixed Attributes |
| DisImpact | Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups |
| disk.frame | Larger-than-RAM Disk-Based Data Manipulation Framework |
| diskImageR | A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays |
| dismo | Species Distribution Modeling |
| disordR | Non-Ordered Vectors |
| disparityfilter | Disparity Filter Algorithm for Weighted Networks |
| dispeRse | Simulation of Demic Diffusion with Environmental Constraints |
| dispmod | Modelling Dispersion in GLM |
| disposables | Create Disposable R Packages for Testing |
| dispositionEffect | Analysis of Disposition Effect on Financial Portfolios |
| dispRity | Measuring Disparity |
| disprofas | Non-Parametric Dissolution Profile Analysis |
| disprose | Discriminating Probes Selection |
| dissCqN | Multiple Assemblage Dissimilarity for Orders q = 0-N |
| dissever | Spatial Downscaling using the Dissever Algorithm |
| DiSSMod | Fitting Sample Selection Models for Discrete Response Variables |
| Distance | Distance Sampling Detection Function and Abundance Estimation |
| distance.sample.size | Calculates Study Size Required for Distance Sampling |
| distances | Tools for Distance Metrics |
| distanceto | Calculate Distance to Features |
| distantia | Assessing Dissimilarity Between Multivariate Time Series |
| DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |
| distcomp | Computations over Distributed Data without Aggregation |
| distcrete | Discrete Distribution Approximations |
| distdichoR | Distributional Method for the Dichotomisation of Continuous Outcomes |
| distfree.cr | Distribution-Free Confidence Region |
| distill | 'R Markdown' Format for Scientific and Technical Writing |
| distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |
| distillML | Model Distillation and Interpretability Methods for Machine Learning Models |
| disto | Unified Interface to Distance, Dissimilarity, Similarity Matrices |
| distory | Distance Between Phylogenetic Histories |
| DistPlotter | A Graphical User Interface for Plotting Common Univariate Distributions |
| distr | Object Oriented Implementation of Distributions |
| distr6 | The Complete R6 Probability Distributions Interface |
| distrDoc | Documentation for 'distr' Family of R Packages |
| distreg.vis | Framework for the Visualization of Distributional Regression Models |
| distrEllipse | S4 Classes for Elliptically Contoured Distributions |
| distrEx | Extensions of Package 'distr' |
| DISTRIB | Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach |
| distributional | Vectorised Probability Distributions |
| DistributionFitR | Fitting Multiple Parametric Distributions |
| DistributionOptimization | Distribution Optimization |
| distributions3 | Probability Distributions as S3 Objects |
| distributionsrd | Distribution Fitting and Evaluation |
| DistributionTest | Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio |
| DistributionUtils | Distribution Utilities |
| distrMod | Object Oriented Implementation of Probability Models |
| distro | Linux Distribution Properties |
| distrom | Distributed Multinomial Regression |
| distrr | Estimate and Manage Empirical Distributions |
| distrRmetrics | Distribution Classes for Distributions from Rmetrics |
| distrSim | Simulation Classes Based on Package 'distr' |
| distrTeach | Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School |
| distrTEst | Estimation and Testing Classes Based on Package 'distr' |
| distTails | A Collection of Full Defined Distribution Tails |
| disttools | Distance Object Manipulation Tools |
| dittodb | A Test Environment for Database Requests |
| div | Report on Diversity and Inclusion in a Corporate Setting |
| divDyn | Diversity Dynamics using Fossil Sampling Data |
| DivE | Diversity Estimator |
| diveMove | Dive Analysis and Calibration |
| diveR | Easily Install and Load Interactive Data Visualization Tools |
| diverge | Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages |
| diverse | Diversity Measures for Complex Systems |
| DiversificationR | Econometric Tools to Measure Portfolio Diversification |
| diversitree | Comparative 'Phylogenetic' Analyses of Diversification |
| diveRsity | A Comprehensive, General Purpose Population Genetics Analysis Package |
| diversityForest | Innovative Complex Split Procedures in Random Forests Through Candidate Split Sampling |
| DiversityOccupancy | Building Diversity Models from Multiple Species Occupancy Models |
| divest | Get Images Out of DICOM Format Quickly |
| divo | Tools for Analysis of Diversity and Similarity in Biological Systems |
| divseg | Calculate Diversity and Segregation Indices |
| dixon | Nearest Neighbour Contingency Table Analysis |
| dixonTest | Dixon's Ratio Test for Outlier Detection |
| diyar | Record Linkage and Epidemiological Case Definitions in R |
| DIZtools | Lightweight Utilities for 'DIZ' R Package Development |
| DIZutils | Utilities for 'DIZ' R Package Development |
| DJL | Distance Measure Based Judgment and Learning |
| dkanr | Client for the 'DKAN' API |
| dkDNA | Diffusion Kernels on a Set of Genotypes |
| dLagM | Time Series Regression Models with Distributed Lag Models |
| DLASSO | Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models |
| dlbayes | Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection |
| dlib | Allow Access to the 'Dlib' C++ Library |
| DLL | Decorrelated Local Linear Estimator |
| dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |
| DLMtool | Data-Limited Methods Toolkit |
| dlnm | Distributed Lag Non-Linear Models |
| dlookr | Tools for Data Diagnosis, Exploration, Transformation |
| DLPCA | The Distributed Local PCA Algorithm |
| dlr | Download and Cache Files Safely |
| dlsem | Distributed-Lag Linear Structural Equation Models |
| dlstats | Download Stats of R Packages |
| dm | Relational Data Models |
| dma | Dynamic Model Averaging |
| dmai | Divisia Monetary Aggregates Index |
| dmbc | Model Based Clustering of Binary Dissimilarity Measurements |
| DMCfun | Diffusion Model of Conflict (DMC) in Reaction Time Tasks |
| dmdScheme | Domain Specific MetaData Scheme |
| dml | Distance Metric Learning in R |
| dmlalg | Double Machine Learning Algorithms |
| DMLLZU | Double Machine Learning |
| dmm | Dyadic Mixed Model for Pedigree Data |
| DMMF | Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model |
| dMod | Dynamic Modeling and Parameter Estimation in ODE Models |
| dmri.tracking | DiST - Diffusion Direction Smoothing and Tracking |
| DMRMark | DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data |
| DMRnet | Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data |
| DMtest | Differential Methylation Tests (DMtest) |
| DMTL | Tools for Applying Distribution Mapping Based Transfer Learning |
| dmtools | Tools for Clinical Data Management |
| dmutate | Mutate Data Frames with Random Variates |
| DMwR2 | Functions and Data for the Second Edition of "Data Mining with R" |
| dnapath | Differential Network Analysis using Gene Pathways |
| DNAseqtest | Generating and Testing DNA Sequences |
| DNAtools | Tools for Analysing Forensic Genetic DNA Data |
| dnet | Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |
| dng | Distributions and Gradients |
| DNH4 | Crawling for Daum News Text |
| DNLC | Differential Network Local Consistency Analysis |
| DNMF | Discriminant Non-Negative Matrix Factorization |
| dnr | Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family |
| do | Data Operator |
| DOBAD | Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains |
| dobin | Dimension Reduction for Outlier Detection |
| dobson | Data from the GLM Book by Dobson and Barnett |
| doBy | Groupwise Statistics, LSmeans, Linear Estimates, Utilities |
| doc2concrete | Measuring Concreteness in Natural Language |
| doc2vec | Distributed Representations of Sentences, Documents and Topics |
| dockerfiler | Easy Dockerfile Creation from R |
| DockerParallel | Using the Docker Container to Create R Workers on Local or Cloud Platform |
| docknitr | Use Docker Images to Process Rmarkdown Blocks |
| doconv | Document Conversion to 'PDF' or 'PNG' |
| docopt | Command-Line Interface Specification Language |
| docopulae | Optimal Designs for Copula Models |
| docore | Utility Functions for Scientific Coding |
| docreview | Opinionated Documentation Checking |
| docstring | Provides Docstring Capabilities to R Functions |
| document | Run 'roxygen2' on (Chunks of) Single Code Files |
| documenter | Documents Files |
| docuSignr | Connect to 'DocuSign' API |
| docxtools | Tools for R Markdown to Docx Documents |
| docxtractr | Extract Data Tables and Comments from 'Microsoft' 'Word' Documents |
| Dodge | Acceptance Sampling Ideas Originated by H.F. Dodge |
| dodgr | Distances on Directed Graphs |
| DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
| DoE.MIParray | Creation of Arrays by Mixed Integer Programming |
| DoE.wrapper | Wrapper Package for Design of Experiments Functionality |
| doebioresearch | Analysis of Design of Experiments for Biological Research |
| DOEM | The Distributed Online Expectation Maximization Algorithms to Solve Parameters of Poisson Mixture Models |
| DoEstRare | Rare Variant Association Test Based on Position Density Estimation |
| doex | The One-Way Heteroscedastic ANOVA Tests |
| doFuture | A Universal Foreach Parallel Adapter using the Future API of the 'future' Package |
| doMC | Foreach Parallel Adaptor for 'parallel' |
| domino | R Console Bindings for the 'Domino Command-Line Client' |
| DominoDataCapture | Domino Data Capture |
| domir | Tools to Support Relative Importance Analysis |
| doMPI | Foreach Parallel Adaptor for the Rmpi Package |
| donut | Nearest Neighbour Search with Variables on a Torus |
| doolkit | Exploration of Dental Surface Topography |
| doParallel | Foreach Parallel Adaptor for the 'parallel' Package |
| DOPE | Drug Ontology Parsing Engine |
| doRedis | 'Foreach' Parallel Adapter Using the 'Redis' Database |
| doremi | Dynamics of Return to Equilibrium During Multiple Inputs |
| doRNG | Generic Reproducible Parallel Backend for 'foreach' Loops |
| DOS | Design of Observational Studies |
| DOS2 | Design of Observational Studies, Companion to the Second Edition |
| dosearch | Causal Effect Identification from Multiple Incomplete Data Sources |
| dosedesignR | Interactive Designing of Dose Finding Studies |
| DoseFinding | Planning and Analyzing Dose Finding Experiments |
| doseminer | Extract Drug Dosages from Free-Text Prescriptions |
| doSNOW | Foreach Parallel Adaptor for the 'snow' Package |
| DOSPortfolio | Dynamic Optimal Shrinkage Portfolio |
| dosresmeta | Multivariate Dose-Response Meta-Analysis |
| dostats | Compute Statistics Helper Functions |
| DOT | Render and Export DOT Graphs in R |
| DoTC | Distribution of Typicality Coefficients |
| dotCall64 | Enhanced Foreign Function Interface Supporting Long Vectors |
| dotenv | Load Environment Variables from '.env' |
| dotgen | Gene-Set Analysis via Decorrelation by Orthogonal Transformation |
| dotprofile | Create and Manage Configuration Profiles |
| dots | Dot Density Maps |
| dotwhisker | Dot-and-Whisker Plots of Regression Results |
| doubcens | Survivor Function Estimation for Doubly Interval-Censored Failure Time Data |
| double.truncation | Analysis of Doubly-Truncated Data |
| DoubleCone | Test Against Parametric Regression Function |
| DoubleExpSeq | Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter |
| DoubleML | Double Machine Learning in R |
| doubt | Enable Operators Containing the '?' Symbol |
| DOvalidation | Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation |
| DOVE | Durability of Vaccine Efficacy |
| Dowd | Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk |
| downlit | Syntax Highlighting and Automatic Linking |
| downloader | Download Files over HTTP and HTTPS |
| downloadthis | Implement Download Buttons in 'rmarkdown' |
| downscale | Downscaling Species Occupancy |
| downscaledl | Downscale of RS Images using Deep Learning |
| downsize | A Tool to Downsize Large Workflows for Testing |
| dowser | B Cell Receptor Phylogenetics Toolkit |
| dparser | Port of 'Dparser' Package |
| DPBBM | Dirichlet Process Beta-Binomial Mixture |
| dpcc | Dynamic Programming for Convex Clustering |
| dPCP | Automated Analysis of Multiplex Digital PCR Data |
| Dpit | Distribution Pitting |
| dplbnDE | Discriminative Parameter Learning of Bayesian Networks by Differential Evolution |
| dplR | Dendrochronology Program Library in R |
| dplyr | A Grammar of Data Manipulation |
| dplyrAssist | RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr' |
| dpmr | Data Package Manager for R |
| DPP | Inference of Parameters of Normal Distributions from a Mixture of Normals |
| DPpack | Differentially Private Statistical Analysis and Machine Learning |
| dppmix | Determinantal Point Process Mixture Models |
| DPQ | Density, Probability, Quantile ('DPQ') Computations |
| DPQmpfr | DPQ (Density, Probability, Quantile) Distribution Computations using MPFR |
| dprint | Print Tabular Data to Graphics Device |
| dpseg | Piecewise Linear Segmentation by Dynamic Programming |
| DPtree | Dirichlet-Based Polya Tree |
| DQAgui | Graphical User Interface for Data Quality Assessment |
| DQAstats | Core Functions for Data Quality Assessment |
| dqrng | Fast Pseudo Random Number Generators |
| dQTG.seq | A BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2 |
| dr | Methods for Dimension Reduction for Regression |
| DR.SC | Joint Dimension Reduction and Spatial Clustering |
| dr4pl | Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model |
| dracor | Decode Draco Format 3D Mesh Data |
| dragon | Deep Time Redox Analysis of the Geobiology Ontology Network |
| dragonking | Statistical Tools to Identify Dragon Kings |
| dragracer | Data Sets for RuPaul's Drag Race |
| dragulaR | Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library' |
| drake | A Pipeline Toolkit for Reproducible Computation at Scale |
| DramaAnalysis | Analysis of Dramatic Texts |
| drat | 'Drat' R Archive Template |
| draw | Wrapper Functions for Producing Graphics |
| drawer | An Interactive HTML Image Editing Tool |
| DRaWR | Discriminative Random Walk with Restart |
| drawsample | Draw Samples with the Desired Properties from a Data Set |
| DRAYL | Computation of Rayleigh Densities of Arbitrary Dimension |
| DrBats | Data Representation: Bayesian Approach That's Sparse |
| drc | Analysis of Dose-Response Curves |
| drda | Dose-Response Data Analysis |
| DRDID | Doubly Robust Difference-in-Differences Estimators |
| DrDimont | Drug Response Prediction from Differential Multi-Omics Networks |
| DRDRtest | A Nonparametric Doubly Robust Test for Continuous Treatment Effect |
| dreamer | Dose Response Models for Bayesian Model Averaging |
| dreamerr | Error Handling Made Easy |
| DREGAR | Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR) |
| drf | Distributional Random Forests |
| drfit | Dose-Response Data Evaluation |
| drgee | Doubly Robust Generalized Estimating Equations |
| DRHotNet | Differential Risk Hotspots in a Linear Network |
| drhur | Learning R with Dr. Hu |
| DriftBurstHypothesis | Calculates the Test-Statistic for the Drift Burst Hypothesis |
| drifter | Concept Drift and Concept Shift Detection for Predictive Models |
| DrillR | R Driver for Apache Drill |
| drimmR | Estimation, Simulation and Reliability of Drifting Markov Models |
| DrImpute | Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
| DRIP | Discontinuous Regression and Image Processing |
| DriveML | Self-Drive Machine Learning Projects |
| driveR | Prioritizing Cancer Driver Genes Using Genomics Data |
| drmdel | Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples |
| droll | Analyze Roll Distributions |
| DRomics | Dose Response for Omics |
| droptest | Simulates LOX Drop Testing |
| drord | Doubly-Robust Estimators for Ordinal Outcomes |
| drought | Statistical Modeling and Assessment of Drought |
| drpop | Efficient and Doubly Robust Population Size Estimation |
| DRR | Dimensionality Reduction via Regression |
| drtmle | Doubly-Robust Nonparametric Estimation and Inference |
| DrugClust | Implementation of a Machine Learning Framework for Predicting Drugs Side Effects |
| drugprepr | Prepare Electronic Prescription Record Data to Estimate Drug Exposure |
| drumr | Turn R into a Drum Machine |
| DRviaSPCN | Drug Repurposing in Cancer via a Subpathway Crosstalk Network |
| ds | Descriptive Statistics |
| ds4psy | Data Science for Psychologists |
| dsa | Seasonal Adjustment of Daily Time Series |
| DSAIDE | Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) |
| DSAIRM | Dynamical Systems Approach to Immune Response Modeling |
| dsample | Discretization-Based Direct Random Sample Generation |
| dsb | Normalize & Denoise Droplet Single Cell Protein Data (CITE-Seq) |
| dscore | D-Score for Child Development |
| dse | Dynamic Systems Estimation (Time Series Package) |
| DSI | 'DataSHIELD' Interface |
| dsims | Distance Sampling Simulations |
| DSjobtracker | What Skills and Qualifications are Required for Data Science Related Jobs? |
| DSL | Distributed Storage and List |
| dslabs | Data Science Labs |
| dslice | Dynamic Slicing |
| DSLite | 'DataSHIELD' Implementation on Local Datasets |
| dsm | Density Surface Modelling of Distance Sampling Data |
| dsmisc | Data Science Box of Pandora Miscellaneous |
| DSMolgenisArmadillo | 'DataSHIELD' Client for 'MOLGENIS Armadillo' |
| DSOpal | 'DataSHIELD' Implementation for 'Opal' |
| dsos | Dataset Shift with Outlier Scores |
| DSpoty | Get 'Spotify' API Multiple Information |
| dsrTest | Tests and Confidence Intervals on Directly Standardized Rates for Several Methods |
| DSSAT | A Comprehensive R Interface for the DSSAT Cropping Systems Model |
| dssd | Distance Sampling Survey Design |
| DSsim | Distance Sampling Simulations |
| DSSP | Implementation of the Direct Sampling Spatial Prior |
| dst | Using the Theory of Belief Functions |
| DstarM | Analyze Two Choice Reaction Time Data with the D*M Method |
| dstat | Conditional Sensitivity Analysis for Matched Observational Studies |
| dstat2x2xk | Demonstrated Insensitivity to Bias in 2x2xK Contingency Tables |
| dSVA | Direct Surrogate Variable Analysis |
| DSWE | Data Science for Wind Energy |
| DT | A Wrapper of the JavaScript Library 'DataTables' |
| dtangle | Cell Type Deconvolution from Gene Expressions |
| DTAplots | Creates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses |
| DTAT | Dose Titration Algorithm Tuning |
| DTAXG | Diagnostic Test Assessment in the Absence of Gold Standard |
| dTBM | Multi-Way Spherical Clustering via Degree-Corrected Tensor Block Models |
| DtD | Distance to Default |
| DTDA | Doubly Truncated Data Analysis |
| DTDA.cif | Doubly Truncated Data Analysis, Cumulative Incidence Functions |
| DTDA.ni | Doubly Truncated Data Analysis, Non Iterative |
| dtgiw | Discrete Transmuted Generalized Inverse Weibull Distribution |
| dti | Analysis of Diffusion Weighted Imaging (DWI) Data |
| DTMCPack | Suite of Functions Related to Discrete-Time Discrete-State Markov Chains |
| dtp | Dynamic Panel Threshold Model |
| dtpcrm | Dose Transition Pathways for Continual Reassessment Method |
| dtplyr | Data Table Back-End for 'dplyr' |
| DTR | Estimation and Comparison of Dynamic Treatment Regimes |
| dtrackr | Track your Data Pipelines |
| DTRlearn2 | Statistical Learning Methods for Optimizing Dynamic Treatment Regimes |
| DTRreg | DTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv) |
| dtrSurv | Dynamic Treatment Regimes for Survival Analysis |
| DTSg | A Class for Working with Time Series Data Based on 'data.table' and 'R6' with Largely Optional Reference Semantics |
| dtt | Discrete Trigonometric Transforms |
| dttr2 | Manipulate Date, POSIXct and hms Vectors |
| dtts | 'data.table' Time-Series |
| dtw | Dynamic Time Warping Algorithms |
| DTWBI | Imputation of Time Series Based on Dynamic Time Warping |
| dtwclust | Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance |
| DTwrappers | Simplified Data Analysis with Wrapper Functions for the 'Data.Table' Package |
| dtwSat | Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis |
| DTWUMI | Imputation of Multivariate Time Series Based on Dynamic Time Warping |
| dual | Automatic Differentiation with Dual Numbers |
| dualtrees | Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform |
| duawranglr | Securely Wrangle Dataset According to Data Usage Agreement |
| dub | Unpacking Assignment for Lists via Pattern Matching |
| DUBStepR | Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data |
| duckdb | DBI Package for the DuckDB Database Management System |
| duckduckr | Simple Client for the DuckDuckGo Instant Answer API |
| dumbbell | Displaying Changes Between Two Points Using Dumbbell Plots |
| dummy | Automatic Creation of Dummies with Support for Predictive Modeling |
| dundermifflin | The Office Quotes on-Demand |
| dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |
| dupree | Identify Duplicated R Code in a Project |
| DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |
| dvir | Disaster Victim Identification |
| dvmisc | Convenience Functions, Moving Window Statistics, and Graphics |
| dvqcc | Dynamic VAR - Based Control Charts for Batch Process Monitoring |
| DWBmodelUN | Dynamic Water Balance a Hydrological Model |
| DWDLargeR | Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination |
| dwdradar | Read Binary Radar Files from 'DWD' (German Weather Service) |
| DWLasso | Degree Weighted Lasso |
| dwlm | Doubly Weighted Linear Model |
| DWLS | Gene Expression Deconvolution Using Dampened Weighted Least Squares |
| dwp | Density-Weighted Proportion |
| DWreg | Parametric Regression for Discrete Response |
| dyads | Dyadic Network Analysis |
| dycdtools | Tools for DYRESM-CAEDYM Model Development: Calibration Assistant and Post-Processing |
| dydea | Detection of Chaotic and Regular Intervals in the Data |
| dygraphs | Interface to 'Dygraphs' Interactive Time Series Charting Library |
| Dykstra | Quadratic Programming using Cyclic Projections |
| DYM | Did You Mean? |
| dymo | Dynamic Mode Decomposition for Multivariate Time Feature Prediction |
| dyn | Time Series Regression |
| dyn.log | Dynamic Logging for R Inspired by Configuration Driven Development |
| dynamac | Dynamic Simulation and Testing for Single-Equation ARDL Models |
| dynamAedes | A Unified Mechanistic Model for the Population Dynamics of Invasive Aedes Mosquitoes |
| dynamic | DFI Cutoffs for Latent Variable Models |
| DynamicGP | Modelling and Analysis of Dynamic Computer Experiments |
| dynamichazard | Dynamic Hazard Models using State Space Models |
| dynamicTreeCut | Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |
| DynaRankR | Inferring Longitudinal Dominance Hierarchies |
| DynareR | A Seamless Integration of 'R' and 'Dynare' |
| dynaSpec | Dynamic Spectrogram Visualizations |
| dynatop | An Implementation of Dynamic TOPMODEL Hydrological Model in R |
| dynatopGIS | Algorithms for Helping Build Dynamic TOPMODEL Implementations from Spatial Data |
| dynaTree | Dynamic Trees for Learning and Design |
| dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |
| DynClust | Denoising and Clustering for Dynamical Image Sequence (2D or 3D)+t |
| DynComm | Dynamic Network Communities Detection and Generation |
| dyncomp | Complexity of Short and Coarse-Grained Time Series |
| dynConfiR | Dynamic Models for Confidence and Response Time Distributions |
| dynCorr | Dynamic Correlation Package |
| dyndimred | Dimensionality Reduction Methods in a Common Format |
| dynetNLAResistance | Resisting Neighbor Label Attack in a Dynamic Network |
| dynfeature | Feature Importance for Dynamic Processes |
| dyngen | A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses |
| dynlm | Dynamic Linear Regression |
| dynmix | Estimation of Dynamic Finite Mixtures |
| DynNom | Visualising Statistical Models using Dynamic Nomograms |
| dynpanel | Dynamic Panel Data Models |
| dynparam | Creating Meta-Information for Parameters |
| dynplot | Visualising Single-Cell Trajectories |
| dynpred | Companion Package to "Dynamic Prediction in Clinical Survival Analysis" |
| dynprog | Dynamic Programming Domain-Specific Language |
| dynr | Dynamic Models with Regime-Switching |
| dynRB | Dynamic Range Boxes |
| dynsbm | Dynamic Stochastic Block Models |
| dynsim | Dynamic Simulations of Autoregressive Relationships |
| dynsurv | Dynamic Models for Survival Data |
| dyntaper | Dynamic Stem Profile Models, AKA Tree Taper Equations |
| DynTxRegime | Methods for Estimating Optimal Dynamic Treatment Regimes |
| dynutils | Common Functionality for the 'dynverse' Packages |
| dynwrap | Representing and Inferring Single-Cell Trajectories |
| DysPIA | Dysregulated Pathway Identification Analysis |
| DysPIAData | Background and Pathway Data Used in 'DysPIA' |
| DySS | Dynamic Screening Systems |
| e1071 | Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |
| E4tools | Management and Processing Tools for Data Produced by the Empatica E4 |
| eadrm | Fitting Dose-Response Models Using an Evolutionary Algorithm |
| eaf | Plots of the Empirical Attainment Function |
| Eagle | Multiple Locus Association Mapping on a Genome-Wide Scale |
| EAinference | Estimator Augmentation and Simulation-Based Inference |
| eAnalytics | Dynamic Web-Based Analytics for the Energy Industry |
| earlygating | Properties of Bayesian Early Gating Designs |
| earlyR | Estimation of Transmissibility in the Early Stages of a Disease Outbreak |
| earth | Multivariate Adaptive Regression Splines |
| earthtide | Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides |
| earthtones | Derive a Color Palette from a Particular Location on Earth |
| EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |
| easyAHP | Analytic Hierarchy Process (AHP) |
| easyalluvial | Generate Alluvial Plots with a Single Line of Code |
| easyanova | Analysis of Variance and Other Important Complementary Analyses |
| easycensus | Quickly Extract and Marginalize U.S. Census Tables |
| easyCODA | Compositional Data Analysis in Practice |
| easycsv | Load Multiple 'csv' and 'txt' Tables |
| easyDes | An Easy Way to Descriptive Analysis |
| EasyDescribe | A Convenient Way of Descriptive Statistics |
| easyDifferentialGeneCoexpression | Easily Performs Differential Coexpression Analysis |
| easylabel | Interactive Scatter Plot and Volcano Plot Labels |
| EasyMx | Easy Model-Builder Functions for 'OpenMx' |
| easyNCDF | Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays |
| easynls | Easy Nonlinear Model |
| easypackages | Easy Loading and Installing of Packages |
| easypower | Sample Size Estimation for Experimental Designs |
| easyPSID | Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID) |
| easyPubMed | Search and Retrieve Scientific Publication Records from PubMed |
| easyr | Helpful Functions from Oliver Wyman Actuarial Consulting |
| easyreg | Easy Regression |
| easySdcTable | Easy Interface to the Statistical Disclosure Control Package 'sdcTable' Extended with the 'GaussSuppression' Method |
| easySVG | An Easy SVG Basic Elements Generator |
| easyVerification | Ensemble Forecast Verification for Large Data Sets |
| eat | Efficiency Analysis Trees |
| eatATA | Create Constraints for Small Test Assembly Problems |
| eatDB | Spreadsheet Interface for Relational Databases |
| eatGADS | Data Management of Large Hierarchical Data |
| EATME | Exponentially Weighted Moving Average with Adjustments to Measurement Error |
| eatRep | Educational Assessment Tools for Replication Methods |
| eatTools | Miscellaneous Functions for the Analysis of Educational Assessments |
| eba | Elimination-by-Aspects Models |
| ebal | Entropy Reweighting to Create Balanced Samples |
| EbayesThresh | Empirical Bayes Thresholding and Related Methods |
| EBCHS | An Empirical Bayes Method for Chi-Squared Data |
| ebci | Robust Empirical Bayes Confidence Intervals |
| ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |
| ebGenotyping | Genotyping and SNP Detection using Next Generation Sequencing Data |
| ebirdst | Access and Analyze eBird Status and Trends Data |
| EBMAforecast | Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms |
| ebmc | Ensemble-Based Methods for Class Imbalance Problem |
| ebnm | Solve the Empirical Bayes Normal Means Problem |
| EBPRS | Derive Polygenic Risk Score Based on Emprical Bayes Theory |
| EBrank | Empirical Bayes Ranking |
| ebreg | Implementation of the Empirical Bayes Method |
| eBsc | "Empirical Bayes Smoothing Splines with Correlated Errors" |
| ec50estimator | An Automated Way to Estimate EC50 for Stratified Datasets |
| eCAR | Eigenvalue CAR Models |
| ecb | Programmatic Access to the European Central Bank's Statistical Data Warehouse |
| ECctmc | Simulation from Endpoint-Conditioned Continuous Time Markov Chains |
| ecd | Elliptic Lambda Distribution and Option Pricing Model |
| Ecdat | Data Sets for Econometrics |
| ecdfHT | Empirical CDF for Heavy Tailed Data |
| ecespa | Functions for Spatial Point Pattern Analysis |
| Ecfun | Functions for 'Ecdat' |
| ECGofTestDx | A Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities |
| ech | Toolbox for ECH with R |
| ECharts2Shiny | Embedding Interactive Charts Generated with ECharts Library into Shiny Applications |
| echarts4r | Create Interactive Graphs with 'Echarts JavaScript' Version 5 |
| echarty | Minimal R/Shiny Interface to JavaScript Library 'ECharts' |
| echelon | The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method |
| eChem | Simulations for Electrochemistry Experiments |
| echo.find | Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO) |
| echogram | Echogram Visualisation and Analysis |
| echor | Access EPA 'ECHO' Data |
| ecipex | Efficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models |
| ECLRMC | Ensemble Correlation-Based Low-Rank Matrix Completion |
| eclust | Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data |
| ecm | Build Error Correction Models |
| ecmwfr | Interface to 'ECMWF' and 'CDS' Data Web Services |
| ecochange | Integrating Ecosystem Remote Sensing Products to Derive EBV Indicators |
| ecocomDP | Tools to Create, Use, and Convert ecocomDP Data |
| ecoCopula | Graphical Modelling and Ordination using Copulas |
| EcoDiet | Estimating a Diet Matrix from Biotracer and Stomach Content Data |
| ecodist | Dissimilarity-Based Functions for Ecological Analysis |
| Ecohydmod | Ecohydrological Modelling |
| EcoIndR | Ecological Indicators |
| ECoL | Complexity Measures for Supervised Problems |
| ecolottery | Coalescent-Based Simulation of Ecological Communities |
| ecolTest | Community Ecology Tests |
| EconDemand | General Analysis of Various Economics Demand Systems |
| econet | Estimation of Parameter-Dependent Network Centrality Measures |
| EcoNetGen | Simulate and Sample from Ecological Interaction Networks |
| economiccomplexity | Computational Methods for Economic Complexity |
| econullnetr | Null Model Analysis for Ecological Networks |
| ecopower | Power Estimates and Equivalence Testing for Multivariate Data |
| ecoreg | Ecological Regression using Aggregate and Individual Data |
| ecorest | Conducts Analyses Informing Ecosystem Restoration Decisions |
| ecosim | Toolbox for Aquatic Ecosystem Modeling |
| ECOSolveR | Embedded Conic Solver in R |
| ecospace | Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |
| ecospat | Spatial Ecology Miscellaneous Methods |
| ecostats | Code and Data Accompanying the Eco-Stats Text (Warton 2022) |
| ecostatscale | Statistical Scaling Functions for Ecological Systems |
| EcotoneFinder | Characterising and Locating Ecotones and Communities |
| ecotox | Analysis of Ecotoxicology |
| ecotoxicology | Methods for Ecotoxicology |
| ECOTOXr | Download and Extract Data from US EPA's ECOTOX Database |
| ecotraj | Ecological Trajectory Analysis |
| EcoTroph | An Implementation of the EcoTroph Ecosystem Modelling Approach |
| ecoval | Procedures for Ecological Assessment of Surface Waters |
| EcoVirtual | Simulation of Ecological Models |
| ecp | Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
| ecpc | Flexible Co-Data Learning for High-Dimensional Prediction |
| ecr | Evolutionary Computation in R |
| ectotemp | Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness |
| ECTTDNN | Cointegration Based Timedelay Neural Network Model |
| Ecume | Equality of 2 (or k) Continuous Univariate and Multivariate Distributions |
| ed50 | Estimate ED50 and Its Confidence Interval |
| ed50simulation | Estimate ED50 and Its Confidence Interval |
| EDA | Energy Decomposition Analysis |
| eda4treeR | Experimental Design and Analysis for Tree Improvement |
| edbuildmapr | Download School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps |
| edcpR | Ecological Data Collection and Processing Package |
| eddington | Compute a Cyclist's Eddington Number |
| edeaR | Exploratory and Descriptive Event-Based Data Analysis |
| edecob | Event Detection Using Confidence Bounds |
| edf | Read Data from European Data Format (EDF and EDF+) Files |
| EDFIR | Estimating Discrimination Factors |
| edfReader | Reading EDF(+) and BDF(+) Files |
| EDFtest | Goodness of Fit Based on Empirical Distribution Function |
| edfun | Creating Empirical Distribution Functions |
| edgar | Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings |
| edgarWebR | SEC Filings Access |
| edgebundle | Algorithms for Bundling Edges in Networks and Visualizing Flow and Metro Maps |
| edgebundleR | Circle Plot with Bundled Edges |
| edgeCorr | Spatial Edge Correction |
| edgedata | Datasets that Support the EDGE Server DIY Logic |
| edibble | Designing Comparative Experiments |
| edina | Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model |
| EDISON | Network Reconstruction and Changepoint Detection |
| editData | 'RStudio' Addin for Editing a 'data.frame' |
| editrules | Parsing, Applying, and Manipulating Data Cleaning Rules |
| EDIutils | An API Client for the Environmental Data Initiative Repository |
| edl | Toolbox for Error-Driven Learning Simulations with Two-Layer Networks |
| edlibR | R Integration for Edlib, the C/C++ Library for Exact Pairwise Sequence Alignment using Edit (Levenshtein) Distance |
| eDMA | Dynamic Model Averaging with Grid Search |
| edmcr | Euclidean Distance Matrix Completion Tools |
| edmdata | Data Sets for Psychometric Modeling |
| EDMeasure | Energy-Based Dependence Measures |
| EDNE.EQ | Implements the EDNE-Test for Equivalence |
| EDOIF | Empirical Distribution Ordering Inference Framework (EDOIF) |
| EDOtrans | Euclidean Distance-Optimized Data Transformation |
| edstan | Stan Models for Item Response Theory |
| EdSurvey | Analysis of NCES Education Survey and Assessment Data |
| educationdata | Retrieve Records from the Urban Institute's Education Data Portal API |
| educineq | Compute and Decompose Inequality in Education |
| edwards97 | Langmuir Semi-Empirical Coagulation Model |
| eechidna | Exploring Election and Census Highly Informative Data Nationally for Australia |
| eefAnalytics | Robust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs |
| eegkit | Toolkit for Electroencephalography Data |
| eegkitdata | Electroencephalography Toolkit Datasets |
| eel | Extended Empirical Likelihood |
| EEM | Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |
| eemdARIMA | EEMD Based Auto Regressive Integrated Moving Average Model |
| EEMDelm | Ensemble Empirical Mode Decomposition and Its Variant Based ELM Model |
| EEMDSVR | Ensemble Empirical Mode Decomposition and Its Variant Based Support Vector Regression Model |
| eemdTDNN | EEMD and Its Variant Based Time Delay Neural Network Model |
| eemR | Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |
| eeptools | Convenience Functions for Education Data |
| eesim | Simulate and Evaluate Time Series for Environmental Epidemiology |
| EESPCA | Eigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA) |
| ef | Modelling Framework for the Estimation of Salmonid Abundance |
| EFA.dimensions | Exploratory Factor Analysis Functions for Assessing Dimensionality |
| EFA.MRFA | Dimensionality Assessment Using Minimum Rank Factor Analysis |
| EFAtools | Fast and Flexible Implementations of Exploratory Factor Analysis Tools |
| EFAutilities | Utility Functions for Exploratory Factor Analysis |
| efdm | Simulate Forest Resources with the European Forestry Dynamics Model |
| EFDR | Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data |
| eff2 | Efficient Least Squares for Total Causal Effects |
| EffectLiteR | Average and Conditional Effects |
| effectR | Predicts Oomycete Effectors |
| effects | Effect Displays for Linear, Generalized Linear, and Other Models |
| effectsize | Indices of Effect Size and Standardized Parameters |
| effectsizescr | Indices for Single-Case Research |
| EffectStars | Visualization of Categorical Response Models |
| EffectStars2 | Effect Stars |
| EffectTreat | Prediction of Therapeutic Success |
| EfficientMaxEigenpair | Efficient Initials for Computing the Maximal Eigenpair |
| efflog | The Causal Effects for a Causal Loglinear Model |
| effsize | Efficient Effect Size Computation |
| eflm | Efficient Fitting of Linear and Generalized Linear Models |
| efreadr | Read European Eddy Fluxes CSV Files |
| eFRED | Fetch Data from the Federal Reserve Economic Database |
| EFS | Tool for Ensemble Feature Selection |
| ega | Error Grid Analysis |
| EGAnet | Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics |
| egg | Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |
| eggCounts | Hierarchical Modelling of Faecal Egg Counts |
| EgoCor | Simple Presentation of Estimated Exponential Semi-Variograms |
| egor | Import and Analyse Ego-Centered Network Data |
| EGRET | Exploration and Graphics for RivEr Trends |
| EGRETci | Exploration and Graphics for RivEr Trends Confidence Intervals |
| eGST | Leveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait |
| eha | Event History Analysis |
| ehaGoF | Calculates Goodness of Fit Statistics |
| ehelp | Enhanced Help to Enable "Docstring"-Comments in Users Functions |
| eHOF | Extended HOF (Huisman-Olff-Fresco) Models |
| EHR | Electronic Health Record (EHR) Data Processing and Analysis Tool |
| EHRtemporalVariability | Delineating Temporal Dataset Shifts in Electronic Health Records |
| ei | Ecological Inference |
| ei.Datasets | Real Datasets for Assessing Ecological Inference Algorithms |
| eia | API Wrapper for 'US Energy Information Administration' Open Data |
| EIAdata | R Wrapper for the Energy Information Administration (EIA) API |
| eicm | Explicit Interaction Community Models |
| eigenmodel | Semiparametric Factor and Regression Models for Symmetric Relational Data |
| EigenR | Complex Matrix Algebra with 'Eigen' |
| eikosograms | The Picture of Probability |
| eimpute | Efficiently Impute Large Scale Incomplete Matrix |
| einet | Effective Information and Causal Emergence |
| einsum | Einstein Summation |
| eiopaR | Access to RFR (Risk-Free Rate) Curves Produced by the EIOPA |
| eiPack | Ecological Inference and Higher-Dimension Data Management |
| eirm | Explanatory Item Response Modeling for Dichotomous and Polytomous Items |
| eive | An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression |
| eivtools | Measurement Error Modeling Tools |
| EIX | Explain Interactions in 'XGBoost' |
| EKMCMC | MCMC Procedures for Estimating Enzyme Kinetics Constants |
| eks | Tidy and Geospatial Kernel Smoothing |
| EL | Two-Sample Empirical Likelihood |
| EL2Surv | Empirical Likelihood (EL) for Comparing Two Survival Functions |
| elaborator | A 'shiny' Application for Exploring Laboratory Data |
| elasdics | Elastic Analysis of Sparse, Dense and Irregular Curves |
| elasso | Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |
| elastes | Elastic Full Procrustes Means for Sparse and Irregular Planar Curves |
| elastic | General Purpose Interface to 'Elasticsearch' |
| elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |
| elbird | Blazing Fast Morphological Analyzer Based on Kiwi(Korean Intelligent Word Identifier) |
| ELCIC | The Empirical Likelihood-Based Consistent Information Criterion |
| elec | Collection of Functions for Statistical Election Audits |
| EleChemr | Electrochemical Reactions Simulation |
| elect | Estimation of Life Expectancies Using Multi-State Models |
| elections | USA Presidential Elections Data |
| electionsBR | R Functions to Download and Clean Brazilian Electoral Data |
| electivity | Algorithms for Electivity Indices |
| electoral | Allocating Seats Methods and Party System Scores |
| elementR | An Framework for Reducing Elemental LAICPMS Data from Solid Structures |
| elevatr | Access Elevation Data from Various APIs |
| elexr | Load Associated Press Election Results with Elex |
| elfDistr | Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution |
| elhmc | Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo |
| ELISAtools | ELISA Data Analysis with Batch Correction |
| elisr | Exploratory Likert Scaling |
| eList | List Comprehension and Tools |
| elitism | Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |
| elliplot | Ellipse Summary Plot of Quantiles |
| ellipse | Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |
| ellipsis | Tools for Working with ... |
| ElliptCopulas | Inference of Elliptical Distributions and Copulas |
| elliptic | Weierstrass and Jacobi Elliptic Functions |
| ellipticalsymmetry | Elliptical Symmetry Tests |
| elmNNRcpp | The Extreme Learning Machine Algorithm |
| ELMR | Extreme Machine Learning (ELM) |
| ELMSO | Implementation of the Efficient Large-Scale Online Display Advertising Algorithm |
| elo | Ranking Teams by Elo Rating and Comparable Methods |
| EloChoice | Preference Rating for Visual Stimuli Based on Elo Ratings |
| EloOptimized | Optimized Elo Rating Method for Obtaining Dominance Ranks |
| EloRating | Animal Dominance Hierarchies by Elo Rating |
| elrm | Exact Logistic Regression via MCMC |
| elsa | Entropy-Based Local Indicator of Spatial Association |
| ElstonStewart | Elston-Stewart Algorithm |
| ELT | Experience Life Tables |
| eltr | Utilise Catastrophe Model Event Loss Table Outputs |
| ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |
| EM.Fuzzy | EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information |
| EMAS | Epigenome-Wide Mediation Analysis Study |
| EMAtools | Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data |
| emayili | Send Email Messages |
| emba | Ensemble Boolean Model Biomarker Analysis |
| EMbC | Expectation-Maximization Binary Clustering |
| embed | Extra Recipes for Encoding Predictors |
| EmbedSOM | Fast Embedding Guided by Self-Organizing Map |
| embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |
| EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |
| EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |
| EMDANNhybrid | Ensemble Machine Learning Hybrid Model |
| emdbook | Support Functions and Data for "Ecological Models and Data" |
| emdi | Estimating and Mapping Disaggregated Indicators |
| emdist | Earth Mover's Distance |
| EMDSVRhybrid | Hybrid Machine Learning Model |
| emg | Exponentially Modified Gaussian (EMG) Distribution |
| emhawkes | Exponential Multivariate Hawkes Model |
| EmiR | Evolutionary Minimizer for R |
| emIRT | EM Algorithms for Estimating Item Response Theory Models |
| EmissV | Tools for Create Emissions for Air Quality Models |
| EmiStatR | Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems |
| EML | Read and Write Ecological Metadata Language Files |
| emld | Ecological Metadata as Linked Data |
| eMLEloglin | Fitting log-Linear Models in Sparse Contingency Tables |
| EMLI | Efficient Maximum Likelihood Identification |
| EMMAgeo | End-Member Modelling of Grain-Size Data |
| emmeans | Estimated Marginal Means, aka Least-Squares Means |
| EMMIXgene | A Mixture Model-Based Approach to the Clustering of Microarray Expression Data |
| EMMIXmfa | Mixture Models with Component-Wise Factor Analyzers |
| EMMIXSSL | Semi-Supervised Learning via Gaussian Mixture Model |
| EMMLi | A Maximum Likelihood Approach to the Analysis of Modularity |
| EMMREML | Fitting Mixed Models with Known Covariance Structures |
| emoa | Evolutionary Multiobjective Optimization Algorithms |
| emoji | Data and Function to Work with Emojis |
| emojifont | Emoji and Font Awesome in Graphics |
| emon | Tools for Environmental and Ecological Survey Design |
| emov | Eye Movement Analysis Package for Fixation and Saccade Detection |
| EMP | Expected Maximum Profit Classification Performance Measure |
| EMpeaksR | Conducting the Peak Fitting Based on the EM Algorithm |
| empichar | Evaluates the Empirical Characteristic Function for Multivariate Samples |
| EmpiricalCalibration | Routines for Performing Empirical Calibration of Observational Study Estimates |
| emplik | Empirical Likelihood Ratio for Censored/Truncated Data |
| emplik2 | Empirical Likelihood Ratio Test for Two Samples with Censored Data |
| ems | Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units |
| EMSaov | The Analysis of Variance with EMS |
| EMSC | Extended Multiplicative Signal Correction |
| EMSNM | EM Algorithm for Sigmoid Normal Model |
| EMSS | Some EM-Type Estimation Methods for the Heckman Selection Model |
| emstreeR | Tools for Fast Computing and Plotting Euclidean Minimum Spanning Trees |
| EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate Data |
| emulator | Bayesian Emulation of Computer Programs |
| emuR | Main Package of the EMU Speech Database Management System |
| EMVS | The Expectation-Maximization Approach to Bayesian Variable Selection |
| enc | Portable Tools for 'UTF-8' Character Data |
| EncDNA | Encoding of Nucleotide Sequences into Numeric Feature Vectors |
| eNchange | Ensemble Methods for Multiple Change-Point Detection |
| encode | Represent Ordered Lists and Pairs as Strings |
| encryptedRmd | Encrypt Html Reports Using 'Libsodium' |
| encryptr | Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys |
| endogeneity | Recursive Two-Stage Models to Address Endogeneity |
| endogenous | Classical Simultaneous Equation Models |
| endorse | Bayesian Measurement Models for Analyzing Endorsement Experiments |
| endoSwitch | Endogenous Switching Regression Models |
| endtoend | Transmissions and Receptions in an End to End Network |
| energy | E-Statistics: Multivariate Inference via the Energy of Data |
| EnergyOnlineCPM | Distribution Free Multivariate Control Chart Based on Energy Test |
| energyr | Data Published by the United States Federal Energy Regulatory Commission |
| enerscape | Compute Energy Landscapes |
| enetLTS | Robust and Sparse Methods for High Dimensional Linear and Binary and Multinomial Regression |
| english | Translate Integers into English |
| EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |
| engsoccerdata | English and European Soccer Results 1871-2016 |
| ENMeval | Automated Tuning and Evaluations of Ecological Niche Models |
| ENMTools | Analysis of Niche Evolution using Niche and Distribution Models |
| enpls | Ensemble Partial Least Squares Regression |
| EnrichIntersect | Enrichment Analysis and Intersecting Sankey Diagram |
| enrichR | Provides an R Interface to 'Enrichr' |
| enrichwith | Methods to Enrich R Objects with Extra Components |
| EnsCat | Clustering of Categorical Data |
| EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |
| ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |
| EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |
| ensembleMOS | Ensemble Model Output Statistics |
| EnsemblePCReg | Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |
| EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners |
| ensemblepp | Ensemble Postprocessing Data Sets |
| ensembleR | Ensemble Models in R |
| ensembleTax | Ensemble Taxonomic Assignments of Amplicon Sequencing Data |
| ensModelVis | Visualisations for Model Ensembles |
| ensr | Elastic Net SearcheR |
| ensurer | Ensure Values at Runtime |
| entropart | Entropy Partitioning to Measure Diversity |
| entropy | Estimation of Entropy, Mutual Information and Related Quantities |
| EntropyEstimation | Estimation of Entropy and Related Quantities |
| EntropyMCMC | MCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation |
| entrymodels | Estimate Entry Models |
| envalysis | Miscellaneous Functions for Environmental Analyses |
| EnvCpt | Detection of Structural Changes in Climate and Environment Time Series |
| envDocument | Document the R Working Environment |
| enveomics.R | Various Utilities for Microbial Genomics and Metagenomics |
| EnvExpInd | Environmental Exposure on the Individual Level |
| envi | Environmental Interpolation using Spatial Kernel Density Estimation |
| enviGCMS | GC/LC-MS Data Analysis for Environmental Science |
| enviPat | Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
| envir | Manage R Environments Better |
| envirem | Generation of ENVIREM Variables |
| EnviroPRA | Environmental Probabilistic Risk Assessment Tools |
| envnames | Keep Track of User-Defined Environment Names |
| EnvNicheR | Niche Estimation |
| EnvNJ | Whole Genome Phylogenies Using Sequence Environments |
| envoutliers | Methods for Identification of Outliers in Environmental Data |
| envstat | Configurable Reporting on your External Compute Environment |
| EnvStats | Package for Environmental Statistics, Including US EPA Guidance |
| eoffice | Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables |
| eoR | Data Management Package (Exposure and Occurrence Data in R) |
| epandist | Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |
| epanet2toolkit | Call 'EPANET' Functions to Simulate Pipe Networks |
| epanetReader | Read Epanet Files into R |
| epcc | Simulating Populations of Ectotherms under Global Warming |
| ePCR | Ensemble Penalized Cox Regression for Survival Prediction |
| EPGMr | Implementation of the Everglades Phosphorus Gradient Model |
| eph | Argentina's Permanent Household Survey Data and Manipulation Utilities |
| Epi | Statistical Analysis in Epidemiology |
| epi2me2r | Process Nanopore EPI2ME Output for Use in R |
| epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |
| epicontacts | Handling, Visualisation and Analysis of Epidemiological Contacts |
| EpiContactTrace | Epidemiological Tool for Contact Tracing |
| EpiCurve | Plot an Epidemic Curve |
| epidata | Tools to Retrieve Economic Policy Institute Data Library Extracts |
| epidemia | Modeling of Epidemics using Hierarchical Bayesian Models |
| epiDisplay | Epidemiological Data Display Package |
| epidm | UK Epidemiological Data Management |
| EpiDynamics | Dynamic Models in Epidemiology |
| EpiEstim | Estimate Time Varying Reproduction Numbers from Epidemic Curves |
| epifitter | Analysis and Simulation of Plant Disease Progress Curves |
| epiflows | Predicting Disease Spread from Flow Data |
| epigraphdb | Interface Package for the 'EpiGraphDB' Platform |
| EpiILM | Spatial and Network Based Individual Level Models for Epidemics |
| EpiILMCT | Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics |
| EpiInvert | Estimation of Time Varying Reproduction Numbers and Restored Incidence Curves Using Variational Techniques |
| epikit | Miscellaneous Tools for the 'R4Epis' Project |
| EpiLPS | A Bayesian Tool for Fast and Flexible Estimation of the Reproduction Number |
| epimdr | Functions and Data for "Epidemics: Models and Data in R" |
| EpiModel | Mathematical Modeling of Infectious Disease Dynamics |
| epinet | Epidemic/Network-Related Tools |
| epinetr | Epistatic Network Modelling with Forward-Time Simulation |
| EpiNow2 | Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters |
| epiR | Tools for the Analysis of Epidemiological Data |
| EpiReport | Epidemiological Report |
| episcan | Scan Pairwise Epistasis |
| episensr | Basic Sensitivity Analysis of Epidemiological Results |
| EpiSignalDetection | Signal Detection Analysis |
| epistasis | Detecting Epistatic Selection with Partially Observed Genotype Data |
| EpiStats | Tools for Epidemiologists |
| EpistemicGameTheory | Constructing an Epistemic Model for the Games with Two Players |
| epitab | Flexible Contingency Tables for Epidemiology |
| epitools | Epidemiology Tools |
| epitrix | Small Helpers and Tricks for Epidemics Analysis |
| epitweetr | Early Detection of Public Health Threats from Twitter Data |
| eplusr | A Toolkit for Using Whole Building Simulation Program 'EnergyPlus' |
| eply | Apply a Function Over Expressions |
| epm | EcoPhyloMapper |
| epoc | Endogenous Perturbation Analysis of Cancer |
| epocakir | Clinical Coding of Patients with Kidney Disease |
| eponge | Keep Your Environment Clean |
| epos | Epilepsy Ontologies' Similarities |
| epr | Easy Polynomial Regression |
| epsiwal | Exact Post Selection Inference with Applications to the Lasso |
| EPT | Ensemble Patch Transform, Visualization and Decomposition |
| epubr | Read EPUB File Metadata and Text |
| epwshiftr | Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data |
| EPX | Ensemble of Phalanxes |
| epxToR | Import 'Epidata' XML Files '.epx' |
| eq5d | Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores |
| EQL | Extended-Quasi-Likelihood-Function (EQL) |
| equalCovs | Testing the Equality of Two Covariance Matrices |
| Equalden.HD | Testing the Equality of a High Dimensional Set of Densities |
| equaltestMI | Examine Measurement Invariance via Equivalence Testing and Projection Method |
| equatags | Equations to 'XML' |
| equate | Observed-Score Linking and Equating |
| equateIRT | IRT Equating Methods |
| equateMultiple | Equating of Multiple Forms |
| equatiomatic | Transform Models into 'LaTeX' Equations |
| EquiSurv | Modeling, Confidence Intervals and Equivalence of Survival Curves |
| equivalence | Provides Tests and Graphics for Assessing Tests of Equivalence |
| equivalenceTest | Equivalence Test for the Means of Two Normal Distributions |
| EQUIVNONINF | Testing for Equivalence and Noninferiority |
| equivUMP | Uniformly Most Powerful Invariant Tests of Equivalence |
| ER | Effect + Residual Modelling |
| era | Year-Based Time Scales |
| erah | Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |
| ercv | Fitting Tails by the Empirical Residual Coefficient of Variation |
| erer | Empirical Research in Economics with R |
| ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |
| ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |
| ergm.ego | Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |
| ergm.multi | Fit, Simulate and Diagnose Exponential-Family Models for Multiple or Multilayer Networks |
| ergm.rank | Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |
| ergMargins | Process Analysis for Exponential Random Graph Models |
| ergmclust | ERGM-Based Network Clustering |
| ergmharris | Local Health Department network data set |
| ergmito | Exponential Random Graph Models for Small Networks |
| erify | Check Arguments and Generate Readable Error Messages |
| eRm | Extended Rasch Modeling |
| ERP | Significance Analysis of Event-Related Potentials Data |
| erp.easy | Event-Related Potential (ERP) Data Exploration Made Easy |
| err | Customizable Object Sensitive Messages |
| erratum | Handle Error and Warning Messages |
| errint | Builds Error Intervals |
| errorist | Automatically Search Errors or Warnings |
| errorlocate | Locate Errors with Validation Rules |
| errors | Uncertainty Propagation for R Vectors |
| errum | Exploratory Reduced Reparameterized Unified Model Estimation |
| ERSA | Exploratory Regression 'Shiny' App |
| eRTG3D | Empirically Informed Random Trajectory Generation in 3-D |
| es.dif | Compute Effect Sizes of the Difference |
| esaBcv | Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |
| esaddle | Extended Empirical Saddlepoint Density Approximations |
| esaps | Indicators of Electoral Systems and Party Systems |
| esback | Expected Shortfall Backtesting |
| esc | Effect Size Computation for Meta Analysis |
| escalation | Modular Approach to Dose Finding Clinical Trials |
| esDesign | Adaptive Enrichment Designs with Sample Size Re-Estimation |
| eSDM | Ensemble Tool for Predictions from Species Distribution Models |
| eseis | Environmental Seismology Toolbox |
| esemifar | Smoothing Long-Memory Time Series |
| ESG | A Package for Asset Projection |
| eshrink | Shrinkage for Effect Estimation |
| eSIR | Extended State-Space SIR Models |
| esmisc | Misc Functions of Eduard Szöcs |
| esmprep | Data Preparation During and After the Use of the Experience Sampling Methodology (ESM) |
| espadon | Easy Study of Patient DICOM Data in Oncology |
| esquisse | Explore and Visualize Your Data Interactively |
| esreg | Joint Quantile and Expected Shortfall Regression |
| ess | Efficient Stepwise Selection in Decomposable Models |
| essentials | Essential Functions not Included in Base R |
| essHist | The Essential Histogram |
| essurvey | Download Data from the European Social Survey on the Fly |
| estadistica | Fundamentos De Estadistica Descriptiva e Inferencial |
| estatapi | R Interface to e-Stat API |
| EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |
| ESTER | Efficient Sequential Testing with Evidence Ratios |
| EstHer | Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection |
| estimability | Tools for Assessing Estimability of Linear Predictions |
| EstimateGroupNetwork | Perform the Joint Graphical Lasso and Selects Tuning Parameters |
| EstimationTools | Maximum Likelihood Estimation for Probability Functions from Data Sets |
| estimatr | Fast Estimators for Design-Based Inference |
| EstimDiagnostics | Diagnostic Tools and Unit Tests for Statistical Estimators |
| estimraw | Estimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures |
| estmeansd | Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis |
| EstMix | Tumor Clones Percentage Estimations |
| estprod | Estimation of Production Functions |
| estudy2 | An Implementation of Parametric and Nonparametric Event Study |
| esvis | Visualization and Estimation of Effect Sizes |
| etable | Easy Table |
| ETAS | Modeling Earthquake Data Using 'ETAS' Model |
| etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description |
| ETC | Equivalence to Control |
| ether | Interaction with the 'Ethereum' Blockchain |
| ethnobotanyR | Calculate Quantitative Ethnobotany Indices |
| EthSEQ | Ethnicity Annotation from Whole Exome Sequencing Data |
| etl | Extract-Transform-Load Framework for Medium Data |
| ETLUtils | Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |
| etm | Empirical Transition Matrix |
| etma | Epistasis Test in Meta-Analysis |
| etrader | 'ETRADE' API Interface for R |
| etree | Classification and Regression with Structured and Mixed-Type Data |
| etrm | Energy Trading and Risk Management |
| etrunct | Computes Moments of Univariate Truncated t Distribution |
| EuclideanSD | An Euclidean View of Center and Spread |
| eudract | Creates Safety Results Summary in XML to Upload to EudraCT, or ClinicalTrials.gov |
| EUfootball | Football Match Data of European Leagues |
| eulerian | eulerian: A package to find eulerian paths from graphs |
| eulerr | Area-Proportional Euler and Venn Diagrams with Ellipses |
| eurlex | Retrieve Data on European Union Law |
| eurocordexr | Makes it Easier to Work with Daily 'netCDF' from EURO-CORDEX RCMs |
| eurodata | Fast and Easy Eurostat Data Import and Search |
| europeanaR | Interact with Metadata Records and Media on the Europeana Repository |
| europepmc | R Interface to the Europe PubMed Central RESTful Web Service |
| europop | Historical Populations of European Cities, 1500-1800 |
| EurosarcBayes | Bayesian Single Arm Sample Size Calculation Software |
| eurostat | Tools for Eurostat Open Data |
| eva | Extreme Value Analysis with Goodness-of-Fit Testing |
| evabic | Evaluation of Binary Classifiers |
| Evacluster | Evaluation Clustering Methods for Disease Subtypes Diagnosis |
| EvalEst | Dynamic Systems Estimation - Extensions |
| evalITR | Evaluating Individualized Treatment Rules |
| evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |
| EvaluateCore | Quality Evaluation of Core Collections |
| EvaluationMeasures | Collection of Model Evaluation Measure Functions |
| EValue | Sensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses |
| Evapotranspiration | Modelling Actual, Potential and Reference Crop Evapotranspiration |
| evclass | Evidential Distance-Based Classification |
| evclust | Evidential Clustering |
| EvCombR | Evidence Combination in R |
| evd | Functions for Extreme Value Distributions |
| event | Event History Procedures and Models |
| eventdataR | Event Data Repository |
| EventDetectGUI | Graphical User Interface for the 'EventDetectR' Package |
| EventDetectR | Event Detection Framework |
| eventglm | Regression Models for Event History Outcomes |
| eventInterval | Sequential Event Interval Analysis |
| eventr | Create Event Based Data Architectures |
| eventstream | Streaming Events and their Early Classification |
| EventStudy | Event Study Analysis |
| eventTrack | Event Prediction for Time-to-Event Endpoints |
| EventWinRatios | Event-Specific Win Ratios for Terminal and Non-Terminal Events |
| evgam | Generalised Additive Extreme Value Models |
| EVI | Epidemic Volatility Index as an Early-Warning Tool |
| evian | Evidential Analysis of Genetic Association Data |
| evidence | Analysis of Scientific Evidence Using Bayesian and Likelihood Methods |
| evidenceFactors | Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies |
| evident | Evidence Factors in Observational Studies |
| EviewsR | A Seamless Integration of 'Eviews' and R |
| evir | Extreme Values in R |
| evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |
| evobiR | Comparative and Population Genetic Analyses |
| evolqg | Tools for Evolutionary Quantitative Genetics |
| EvolutionaryGames | Important Concepts of Evolutionary Game Theory |
| evolvability | Calculation of Evolvability Parameters |
| Evomorph | Evolutionary Morphometric Simulation |
| evoper | Evolutionary Parameter Estimation for 'Repast Simphony' Models |
| EvoPhylo | Pre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics |
| evtclass | Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers |
| evtree | Evolutionary Learning of Globally Optimal Trees |
| EWGoF | Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |
| ewoc | Escalation with Overdose Control |
| EwR | Econometrics with R |
| EWS | Early Warning System |
| Exact | Unconditional Exact Test |
| exact.n | Exact Samples Sizes and Inference for Clinical Trials with Binary Endpoint |
| exact2x2 | Exact Tests and Confidence Intervals for 2x2 Tables |
| exactci | Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |
| ExactCIdiff | Inductive Confidence Intervals for the Difference Between Two Proportions |
| exactextractr | Fast Extraction from Raster Datasets using Polygons |
| ExactMed | Exact Mediation Analysis for Binary Outcomes |
| ExactMultinom | Multinomial Goodness-of-Fit Tests |
| exactRankTests | Exact Distributions for Rank and Permutation Tests |
| ExamPAData | Data Sets for Predictive Analytics Exam |
| exampletestr | Help for Writing Unit Tests Based on Function Examples |
| exams | Automatic Generation of Exams in R |
| exams.mylearn | Question Generation in the 'MyLearn' XML Format |
| exams2sakai | Automatic Generation of Exams in R for 'Sakai' |
| ExceedanceTools | Confidence/Credible Regions for Exceedance Sets and Contour Lines |
| exceedProb | Confidence Intervals for Exceedance Probability |
| excel.link | Convenient Data Exchange with Microsoft Excel |
| exceldata | Streamline Data Import, Cleaning and Recoding from 'Excel' |
| ExcelFunctionsR | Imports Excel Functions to R |
| excelR | A Wrapper of the 'JavaScript' Library 'jExcel' |
| excelstrippr | Extracts Tabular Data from Excel Reports |
| excerptr | Excerpt Structuring Comments from Your Code File and Set a Table of Contents |
| ExcessMass | Excess Mass Calculation and Plots |
| excessmort | Excess Mortality |
| excluder | Checks for Exclusion Criteria in Online Data |
| exCon | Interactive Exploration of Contour Data |
| excursions | Excursion Sets and Contour Credibility Regions for Random Fields |
| exdex | Estimation of the Extremal Index |
| exdqlm | Extended Dynamic Quantile Linear Models |
| ExhaustiveSearch | A Fast and Scalable Exhaustive Feature Selection Framework |
| exif | Read EXIF Metadata from JPEGs |
| exifr | EXIF Image Data in R |
| exiftoolr | ExifTool Functionality from R |
| ExomeDepth | Calls Copy Number Variants from Targeted Sequence Data |
| exoplanets | Access NASA's Exoplanet Archive Data |
| exp2flux | Convert Gene EXPression Data to FBA FLUXes |
| ExpAnalysis3d | Pacote Para Analise De Experimentos Com Graficos De Superficie Resposta |
| ExPanDaR | Explore Your Data Interactively |
| expandFunctions | Feature Matrix Builder |
| expDB | Database for Experiment Dataset |
| ExpDE | Modular Differential Evolution for Experimenting with Operators |
| ExpDes | Experimental Designs Package |
| ExpDes.pt | Pacote Experimental Designs (Portugues) |
| expectreg | Expectile and Quantile Regression |
| experDesign | Design Experiments for Batches |
| experiment | R Package for Designing and Analyzing Randomized Experiments |
| experimentr | Datasets Used in Social Science Experiments: A Hands-on Introduction |
| ExpertChoice | Design of Discrete Choice and Conjoint Analysis |
| ExpImage | Tool For Analysis of Images in Experiments |
| expint | Exponential Integral and Incomplete Gamma Function |
| expirest | Expiry Estimation Procedures |
| ExplainPrediction | Explanation of Predictions for Classification and Regression Models |
| ExplodeLayout | Calculate Exploded Coordinates Based on Original Node Coordinates and Node Clustering Membership |
| explor | Interactive Interfaces for Results Exploration |
| exploratory | A Tool for Large-Scale Exploratory Analyses |
| explore | Simplifies Exploratory Data Analysis |
| exploreR | Tools for Quickly Exploring Data |
| expm | Matrix Exponential, Log, 'etc' |
| ExPosition | Exploratory Analysis with the Singular Value Decomposition |
| ExposR | Models Topographic Exposure to Hurricane Winds |
| expp | Spatial Analysis of Extra-Pair Paternity |
| expperm | Computing Expectations and Marginal Likelihoods for Permutations |
| ExpRep | Experiment Repetitions |
| expSBM | An Exponential Stochastic Block Model for Interaction Lengths |
| expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |
| expss | Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics |
| expstudy | Experience Study Tools for Analytics and Communications |
| exreport | Fast, Reliable and Elegant Reproducible Research |
| EXRQ | Extreme Regression of Quantiles |
| ExtDist | Extending the Range of Functions for Probability Distributions |
| extdplyr | Data Manipulation Extensions of 'Dplyr' and 'Tidyr' |
| extendedFamily | Additional Families for Generalized Linear Models |
| exteriorMatch | Constructs the Exterior Match from Two Matched Control Groups |
| extlasso | Maximum Penalized Likelihood Estimation with Extended Lasso Penalty |
| ExtMallows | An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation |
| ExtractTrainData | Extract Values from Raster |
| extraDistr | Additional Univariate and Multivariate Distributions |
| extrafont | Tools for Using Fonts |
| extrafontdb | Package for holding the database for the extrafont package |
| extrafrail | Estimation and Additional Tools for Alternative Shared Frailty Models |
| extraoperators | Extra Binary Relational and Logical Operators |
| extras | Helper Functions for Bayesian Analyses |
| extraterrestrial | Astrobiology Equations Estimating Extraterrestrial Life |
| extRatum | Summary Statistics for Geospatial Features |
| extRC | Extended RC Models for Contingency Tables |
| ExtremalDep | Extremal Dependence Models |
| ExtremeBounds | Extreme Bounds Analysis (EBA) |
| extremefit | Estimation of Extreme Conditional Quantiles and Probabilities |
| extremeIndex | Forecast Verification for Extreme Events |
| ExtremeRisks | Extreme Risk Measures |
| extRemes | Extreme Value Analysis |
| extremeStat | Extreme Value Statistics and Quantile Estimation |
| extremevalues | Univariate Outlier Detection |
| extremis | Statistics of Extremes |
| extremogram | Estimation of Extreme Value Dependence for Time Series Data |
| exuber | Econometric Analysis of Explosive Time Series |
| eye | Analysis of Eye Data |
| eyedata | Open Source Ophthalmic Data Sets Curated for R |
| eyelinker | Import ASC Files from EyeLink Eye Trackers |
| eyeRead | Prepare/Analyse Eye Tracking Data for Reading |
| eyetrackingR | Eye-Tracking Data Analysis |
| eyeTrackR | Organising and Analysing Eye-Tracking Data |
| ez | Easy Analysis and Visualization of Factorial Experiments |
| ez.combat | Easy ComBat Harmonization |
| ezcox | Easily Process a Batch of Cox Models |
| ezCutoffs | Fit Measure Cutoffs in SEM |
| ezec | Easy Interface to Effective Concentration Calculations |
| ezEDA | Task Oriented Interface for Exploratory Data Analysis |
| ezglm | selects significant non-additive interaction between two variables using fast GLM implementation |
| ezknitr | Avoid the Typical Working Directory Pain When Using 'knitr' |
| ezmmek | Easy Michaelis-Menten Enzyme Kinetics |
| ezpickr | Easy Data Import Using GUI File Picker |
| ezplot | Functions for Common Chart Types |
| ezr | Easy Use of R via Shiny App for Basic Analyses of Experimental Data |
| EZtune | Tunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines |
| fabCI | FAB Confidence Intervals |
| FABInference | FAB p-Values and Confidence Intervals |
| fabisearch | Change Point Detection in High-Dimensional Time Series Networks |
| fable | Forecasting Models for Tidy Time Series |
| fable.ata | 'ATAforecasting' Modelling Interface for 'fable' Framework |
| fable.prophet | Prophet Modelling Interface for 'fable' |
| fabletools | Core Tools for Packages in the 'fable' Framework |
| fabMix | Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components |
| fabricatr | Imagine Your Data Before You Collect It |
| fabricerin | Create Easily Canvas in 'shiny' and 'RMarkdown' Documents |
| face | Fast Covariance Estimation for Sparse Functional Data |
| facerec | An Interface for Face Recognition |
| factiv | Instrumental Variables Estimation for 2^k Factorial Experiments |
| FACTMLE | Maximum Likelihood Factor Analysis |
| FactoClass | Combination of Factorial Methods and Cluster Analysis |
| factoextra | Extract and Visualize the Results of Multivariate Data Analyses |
| FactoInvestigate | Automatic Description of Factorial Analysis |
| FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |
| factoptd | Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments |
| factor.switching | Post-Processing MCMC Outputs of Bayesian Factor Analytic Models |
| FactorAssumptions | Set of Assumptions for Factor and Principal Component Analysis |
| FactorCopula | Factor, Bi-Factor and Second-Order Copula Models |
| factorial2x2 | Design and Analysis of a 2x2 Factorial Trial |
| factorMerger | The Merging Path Plot |
| factormodel | Factor Model Estimation Using Proxy Variables |
| factorplot | Graphical Presentation of Simple Contrasts |
| FactorsR | Identification of the Factors Affecting Species Richness |
| factorstochvol | Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models |
| factory | Build Function Factories |
| Factoshiny | Perform Factorial Analysis from 'FactoMineR' with a Shiny Application |
| factset.analyticsapi.engines | 'FactSet' Engines API Client |
| fad | Factor Analysis for Data |
| FADA | Variable Selection for Supervised Classification in High Dimension |
| FAdist | Distributions that are Sometimes Used in Hydrology |
| FADPclust | Functional Data Clustering Using Adaptive Density Peak Detection |
| Fahrmeir | Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz |
| fail | File Abstraction Interface Layer (FAIL) |
| fairadapt | Fair Data Adaptation with Quantile Preservation |
| FAIRmaterials | Make Materials Data FAIR |
| FairMclus | Clustering for Data with Sensitive Attribute |
| fairml | Fair Models in Machine Learning |
| fairmodels | Flexible Tool for Bias Detection, Visualization, and Mitigation |
| fairness | Algorithmic Fairness Metrics |
| fairsubset | Choose Representative Subsets |
| fake | Flexible Data Simulation Using the Multivariate Normal Distribution |
| fakemake | Mock the Unix Make Utility |
| fakmct | Fuzzy Adaptive Resonance Theory K-Means Clustering Technique |
| falcon | Finding Allele-Specific Copy Number in Next-Generation Sequencing Data |
| falconx | Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data |
| fam.recrisk | Familial Recurrence Risk |
| fame | Interface for FAME Time Series Database |
| FAMetA | Fatty Acid Metabolic Analysis |
| familial | Statistical Tests of Familial Hypotheses |
| familiar | End-to-End Automated Machine Learning and Model Evaluation |
| Families | Kinship Ties in Virtual Populations |
| FamilyRank | Algorithm for Ranking Predictors Using Graphical Domain Knowledge |
| FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |
| FAMoS | A Flexible Algorithm for Model Selection |
| famSKATRC | Family Sequence Kernel Association Test for Rare and Common Variants |
| FAMT | Factor Analysis for Multiple Testing (FAMT) : Simultaneous Tests under Dependence in High-Dimensional Data |
| fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |
| fANCOVA | Nonparametric Analysis of Covariance |
| fancycut | A Fancy Version of 'base::cut' |
| fanovaGraph | Building Kriging Models from FANOVA Graphs |
| fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |
| fansi | ANSI Control Sequence Aware String Functions |
| FAO56 | Evapotranspiration Based on FAO Penman-Monteith Equation |
| FAOSTAT | Download Data from the FAOSTAT Database |
| faoutlier | Influential Case Detection Methods for Factor Analysis and Structural Equation Models |
| faq | Create FAQ Page |
| far | Modelization for Functional AutoRegressive Processes |
| faraway | Functions and Datasets for Books by Julian Faraway |
| FARDEEP | Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares |
| farff | A Faster 'ARFF' File Reader and Writer |
| FarmSelect | Factor Adjusted Robust Model Selection |
| FarmTest | Factor-Adjusted Robust Multiple Testing |
| farr | Data and Code for Financial Accounting Research |
| farrell | Interactive Interface to Data Envelopment Analysis Modeling |
| farver | High Performance Colour Space Manipulation |
| fasano.franceschini.test | Fasano-Franceschini Test: A Multidimensional Kolmogorov-Smirnov Two-Sample Test |
| FASeg | Joint Segmentation of Correlated Time Series |
| fasi | Fair Adjusted Selective Inference |
| fasjem | A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models |
| fAssets | Rmetrics - Analysing and Modelling Financial Assets |
| fasstr | Analyze, Summarize, and Visualize Daily Streamflow Data |
| fasta | Fast Adaptive Shrinkage/Thresholding Algorithm |
| fastAdaboost | a Fast Implementation of Adaboost |
| fastadi | Self-Tuning Data Adaptive Matrix Imputation |
| fastai | Interface to 'fastai' |
| FastBandChol | Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor |
| fastclime | A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector |
| fastcluster | Fast Hierarchical Clustering Routines for R and 'Python' |
| fastcmh | Significant Interval Discovery with Categorical Covariates |
| fastcmprsk | Fine-Gray Regression via Forward-Backward Scan |
| fastCorrDiff | Fast Differential Correlation Matrix Screening |
| fastcox | Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm |
| FastCUB | Fast EM and Best-Subset Selection for CUB Models for Rating Data |
| fastdigest | Fast, Low Memory-Footprint Digests of R Objects |
| fastDummies | Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables |
| fasterElasticNet | An Amazing Fast Way to Fit Elastic Net |
| fasterize | Fast Polygon to Raster Conversion |
| FastGaSP | Fast and Exact Computation of Gaussian Stochastic Process |
| fastGHQuad | Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature |
| fastglm | Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' |
| FastGP | Efficiently Using Gaussian Processes with Rcpp and RcppEigen |
| fastGraph | Fast Drawing and Shading of Graphs of Statistical Distributions |
| FastHCS | Robust Algorithm for Principal Component Analysis |
| fasthplus | Fast Label-Dissimilarity Discordance Estimation with H+ |
| fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |
| FastImputation | Learn from Training Data then Quickly Fill in Missing Data |
| FastJM | Semi-Parametric Joint Modeling of Longitudinal and Survival Data |
| fastJT | Efficient Jonckheere-Terpstra Test Statistics |
| FastKM | A Fast Multiple-Kernel Method Based on a Low-Rank Approximation |
| fastkmedoids | Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS |
| FastKNN | Fast k-Nearest Neighbors |
| fastLaplace | A Fast Laplace Method for Spatial Generalized Linear Mixed Model |
| fastLink | Fast Probabilistic Record Linkage with Missing Data |
| fastlogitME | Basic Marginal Effects for Logit Models |
| fastlogranktest | A Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests |
| fastM | Fast Computation of Multivariate M-Estimators |
| fastmap | Fast Data Structures |
| fastmaRching | Fast Marching Method for Modelling Evolving Boundaries |
| fastmatch | Fast 'match()' Function |
| fastmatrix | Fast Computation of some Matrices Useful in Statistics |
| fastmit | Fast Mutual Information Based Independence Test |
| fastNaiveBayes | Extremely Fast Implementation of a Naive Bayes Classifier |
| fastnet | Large-Scale Social Network Analysis |
| fastOnlineCpt | Online Multivariate Changepoint Detection |
| FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |
| fastpos | Finds the Critical Sequential Point of Stability for a Pearson Correlation |
| fastpseudo | Fast Pseudo Observations |
| fastqcr | Quality Control of Sequencing Data |
| fastqq | Faster Generation of Quantile Quantile Plots with Large Samples |
| fastR2 | Foundations and Applications of Statistics Using R (2nd Edition) |
| FastRCS | Fits the FastRCS Robust Multivariable Linear Regression Model |
| fastRG | Sample Generalized Random Dot Product Graphs in Linear Time |
| fastRhockey | Functions to Access Premier Hockey Federation and National Hockey League Play by Play Data |
| fastrmodels | Models for the 'nflfastR' Package |
| FastRWeb | Fast Interactive Framework for Web Scripting Using R |
| FastSF | Fast Structural Filtering |
| fastshap | Fast Approximate Shapley Values |
| fastSOM | Fast Calculation of Spillover Measures |
| fastText | Efficient Learning of Word Representations and Sentence Classification |
| fastTextR | An Interface to the 'fastText' Library |
| fasttime | Fast Utility Function for Time Parsing and Conversion |
| fastTopics | Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data |
| fastverse | A Suite of High-Performance Packages for Statistics and Data Manipulation |
| fat2Lpoly | Two-Locus Family-Based Association Test with Polytomous Outcome |
| FateID | Quantification of Fate Bias in Multipotent Progenitors |
| FatTailsR | Kiener Distributions and Fat Tails in Finance |
| FaultTree | Fault Trees for Risk and Reliability Analysis |
| faux | Simulation for Factorial Designs |
| fauxnaif | Convert Values to NA |
| fauxpas | HTTP Error Helpers |
| FAVAR | Bayesian Analysis of a FAVAR Model |
| faviconPlease | Find the URL to the 'Favicon' for a Website |
| favnums | A Dataset of Favourite Numbers |
| FAwR | Functions and Datasets for "Forest Analytics with R" |
| fbar | An Extensible Approach to Flux Balance Analysis |
| fBasics | Rmetrics - Markets and Basic Statistics |
| fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |
| FBFsearch | Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors |
| fBonds | Rmetrics - Pricing and Evaluating Bonds |
| fbRads | Analyzing and Managing Facebook Ads from R |
| fbroc | Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves |
| fbst | The Full Bayesian Evidence Test, Full Bayesian Significance Test and the e-Value |
| fc | Standard Evaluation-Based Multivariate Function Composition |
| fca | Floating Catchment Area (FCA) Methods to Calculate Spatial Accessibility |
| fcaR | Formal Concept Analysis |
| fcci | Feldman-Cousins Confidence Intervals |
| fcfdr | Flexible cFDR |
| fcirt | Forced Choice in Item Response Theory |
| fclust | Fuzzy Clustering |
| fcm | Inference of Fuzzy Cognitive Maps (FCMs) |
| FCMapper | Fuzzy Cognitive Mapping |
| FCO | Flexible Cutoffs for Model Fit Evaluation in Covariance-Based Structural Models |
| fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |
| FCPS | Fundamental Clustering Problems Suite |
| fcr | Functional Concurrent Regression for Sparse Data |
| fcros | A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations |
| FCSlib | A Collection of Fluorescence Fluctuation Spectroscopy Analysis Methods |
| fctbases | Functional Bases |
| fcuk | The Ultimate Helper for Clumsy Fingers |
| FCVAR | Estimation and Inference for the Fractionally Cointegrated VAR |
| FD | Measuring Functional Diversity (FD) from Multiple Traits, and Other Tools for Functional Ecology |
| fda | Functional Data Analysis |
| fda.usc | Functional Data Analysis and Utilities for Statistical Computing |
| fdaACF | Autocorrelation Function for Functional Time Series |
| fdacluster | Joint Clustering and Alignment of Functional Data |
| fdadensity | Functional Data Analysis for Density Functions by Transformation to a Hilbert Space |
| fdaMixed | Functional Data Analysis in a Mixed Model Framework |
| fdaMocca | Model-Based Clustering for Functional Data with Covariates |
| fdANOVA | Analysis of Variance for Univariate and Multivariate Functional Data |
| fdaoutlier | Outlier Detection Tools for Functional Data Analysis |
| fdapace | Functional Data Analysis and Empirical Dynamics |
| fdapaceShiny | A Shiny App for the 'fdapace' Package |
| fdaPDE | Functional Data Analysis and Partial Differential Equations (PDE); Statistical Analysis of Functional and Spatial Data, Based on Regression with PDE Regularization |
| fdaPOIFD | Partially Observed Integrated Functional Depth |
| fdasrvf | Elastic Functional Data Analysis |
| fdatest | Interval Testing Procedure for Functional Data |
| FDboost | Boosting Functional Regression Models |
| fddm | Fast Implementation of the Diffusion Decision Model |
| fdistr | Frequency Distribution Tables |
| fdm2id | Data Mining and R Programming for Beginners |
| fDMA | Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes |
| fdq | Forest Data Quality |
| fdrci | Permutation-Based FDR Point and Confidence Interval Estimation |
| fdrDiscreteNull | False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions |
| FDRestimation | Estimate, Plot, and Summarize False Discovery Rates |
| FDRsampsize | Compute Sample Size that Meets Requirements for Average Power and FDR |
| FDRSeg | FDR-Control in Multiscale Change-Point Segmentation |
| fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |
| fds | Functional Data Sets |
| fdth | Frequency Distribution Tables, Histograms and Polygons |
| FDX | False Discovery Exceedance Controlling Multiple Testing Procedures |
| FEA | Finite Element Modeling for R |
| FeaLect | Scores Features for Feature Selection |
| feamiR | Classification and Feature Selection for microRNA/mRNA Interactions |
| feasts | Feature Extraction and Statistics for Time Series |
| feather | R Bindings to the Feather 'API' |
| feature | Local Inferential Feature Significance for Multivariate Kernel Density Estimation |
| featureCorMatrix | Measurement Level Independent Feature Correlation Matrix |
| featurefinder | Feature Finder |
| featureflag | Turn Features On and Off using Feature Flags |
| FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |
| FeatureImpCluster | Feature Importance for Partitional Clustering |
| features | Feature Extraction for Discretely-Sampled Functional Data |
| FeatureTerminatoR | Feature Selection Engine to Remove Features with Minimal Predictive Power |
| featuretoolsR | Interact with the 'Python' Module 'Featuretools' |
| featurizer | Some Helper Functions that Help Create Features from Data |
| febr | Data Repository of the Brazilian Soil |
| fec16 | Data Package for the 2016 United States Federal Elections |
| fechner | Fechnerian Scaling of Discrete Object Sets |
| FedData | Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources |
| federalregister | Client Package for the U.S. Federal Register API |
| fedmatch | Fast, Flexible, and User-Friendly Record Linkage Methods |
| fedregs | Text Analysis of the US Code of Federal Regulations |
| fedstatAPIr | Unofficial API for Fedstat (Rosstat EMISS System) for Automatic and Efficient Data Queries |
| FeedbackTS | Analysis of Feedback in Time Series |
| feisr | Estimating Fixed Effects Individual Slope Models |
| fellov | Feasible Ellipse Overlap |
| felp | Functional Help for Functions, Objects, and Packages |
| fence | Using Fence Methods for Model Selection |
| FENmlm | Fixed Effects Nonlinear Maximum Likelihood Models |
| FEprovideR | Fixed Effects Logistic Model with High-Dimensional Parameters |
| FER | Financial Engineering in R |
| fergm | Estimation and Fit Assessment of Frailty Exponential Random Graph Models |
| fermicatsR | Fermi Large Area Telescope Catalogs |
| ferrn | Facilitate Exploration of touRR optimisatioN |
| FertBoot | Fertilizer Response Curve Analysis by Bootstrapping Residuals |
| FESta | Fishing Effort Standardisation |
| fExtremes | Rmetrics - Modelling Extreme Events in Finance |
| ff | Memory-Efficient Storage of Large Data on Disk and Fast Access Functions |
| FFD | Freedom from Disease |
| FFdownload | Download Data from Kenneth French's Website |
| fflr | Retrieve ESPN Fantasy Football Data |
| ffmanova | Fifty-Fifty MANOVA |
| ffmetadata | Access to Fragile Families Metadata |
| ffp | Fully Flexible Probabilities for Stress Testing and Portfolio Construction |
| ffscrapr | API Client for Fantasy Football League Platforms |
| ffsimulator | Simulate Fantasy Football Seasons |
| ffstream | Forgetting Factor Methods for Change Detection in Streaming Data |
| FFTrees | Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees |
| fftw | Fast FFT and DCT Based on the FFTW Library |
| fftwtools | Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms |
| FGalgorithm | Flury and Gautschi algorithms |
| fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |
| fgdr | Utilities for Fundamental Geo-Spatial Data |
| fgeo | Analyze Forest Diversity and Dynamics |
| fgeo.analyze | Analyze ForestGEO Data |
| fgeo.plot | Plot ForestGEO Data |
| fgeo.tool | Import and Manipulate 'ForestGEO' Data |
| fgeo.x | Access Small ForestGEO Datasets For Examples |
| fgitR | Using 'FastGit' to Accelerate the Access to 'GitHub' |
| FGLMtrunc | Truncated Functional Generalized Linear Models |
| fglsnet | A Feasible Generalized Least Squares Estimator for Regression Analysis of Outcomes with Network Dependence |
| fgm | Partial Separability and Functional Gaussian Graphical Models |
| Fgmutils | Forest Growth Model Utilities |
| FGSG | Feature Grouping and Selection Over an Undirected Graph |
| fgui | Function GUI |
| FHDI | Fractional Hot Deck and Fully Efficient Fractional Imputation |
| fhircrackr | Handling HL7 FHIR Resources in R |
| fHMM | Fitting Hidden Markov Models to Financial Data |
| FHtest | Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class |
| FI | Provide functions for forest inventory calculations |
| fiberLD | Fiber Length Determination |
| fic | Focused Information Criteria for Model Comparison |
| fICA | Classical, Reloaded and Adaptive FastICA Algorithms |
| fidelius | Browser-Side Password-Protected HTML Documents |
| fido | Bayesian Multinomial Logistic Normal Regression |
| FielDHub | A Shiny App for Design of Experiments in Life Sciences |
| fieldRS | Remote Sensing Field Work Tools |
| fields | Tools for Spatial Data |
| fiery | A Lightweight and Flexible Web Framework |
| FIESTA | Forest Inventory Estimation and Analysis |
| FIESTAutils | Utility Functions for Forest Inventory Estimation and Analysis |
| fig | A Config Package with No "Con" |
| figpatch | Easily Arrange External Figures with Patchwork Alongside 'ggplot2' Figures |
| file2meco | Transform Files to 'microtable' Object with 'microeco' Package |
| filearray | File-Backed Array for Out-of-Memory Computation |
| filebin | Wrapper for the Filebin File Sharing API |
| filehash | Simple Key-Value Database |
| filehashSQLite | Simple Key-Value Database Using SQLite |
| filelock | Portable File Locking |
| filematrix | File-Backed Matrix Class with Convenient Read and Write Access |
| filenamer | Easy Management of File Names |
| files | Effective File Navigation from the R Console |
| filesstrings | Handy File and String Manipulation |
| FILEST | Fine-Level Structure Simulator |
| filling | Matrix Completion, Imputation, and Inpainting Methods |
| fillr | Fill Missing Values in Vectors |
| filterNHP | Non-Human Primate Search Filters |
| fImport | Rmetrics - Importing Economic and Financial Data |
| finalfit | Quickly Create Elegant Regression Results Tables and Plots when Modelling |
| FinAna | Financial Analysis and Regression Diagnostic Analysis |
| FinancialInstrument | Financial Instrument Model Infrastructure and Meta-Data |
| FinancialMath | Financial Mathematics for Actuaries |
| FinAsym | Classifies implicit trading activity from market quotes and computes the probability of informed trading |
| finbif | Interface for the 'Finnish Biodiversity Information Facility' API |
| FinCal | Time Value of Money, Time Series Analysis and Computational Finance |
| finch | Parse Darwin Core Files |
| FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |
| FindAllRoots | Find all root(s) of the equation and Find root(s) of the equation by dichotomy |
| findInFiles | Find Pattern in Files |
| findInGit | Find Pattern in Files of All Branches of a 'git' Repository |
| FindIt | Finding Heterogeneous Treatment Effects |
| findpython | Functions to Find an Acceptable Python Binary |
| findR | Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching |
| findviews | A View Generator for Multidimensional Data |
| FinePop | Fine-Scale Population Analysis |
| FinePop2 | Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis) |
| finetune | Additional Functions for Model Tuning |
| fingerprint | Functions to Operate on Binary Fingerprint Data |
| fingerPro | Sediment Source Fingerprinting |
| finiteruinprob | Computation of the Probability of Ruin Within a Finite Time Horizon |
| finity | Test for Finiteness of Moments in a Distribution |
| finnishgrid | 'Fingrid Open Data API' R Client |
| finnts | Microsoft Finance Time Series Forecasting Framework |
| finreportr | Financial Data from U.S. Securities and Exchange Commission |
| FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |
| fipio | Lightweight Federal Information Processing System (FIPS) Code Information Retrieval |
| fipp | Induced Priors in Bayesian Mixture Models |
| FiRE | Finder of Rare Entities (FiRE) |
| firebase | Integrates 'Google Firebase' Authentication Storage, and 'Analytics' with 'Shiny' |
| firebehavioR | Prediction of Wildland Fire Behavior and Hazard |
| Fiscore | Effective Protein Structural Data Visualisation and Exploration |
| FiSh | Fisher-Shannon Method |
| fishbc | Fishes of British Columbia |
| fishdata | A Small Collection of Fish Population Datasets |
| FisherEM | The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data |
| fisheye | Transform Base Maps Using Log-Azimuthal Projection |
| fishkirkko2015 | Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland |
| fishmethods | Fishery Science Methods and Models |
| fishMod | Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models |
| FishPhyloMaker | Phylogenies for a List of Finned-Ray Fishes |
| FishResp | Analytical Tool for Aquatic Respirometry |
| fishtree | Interface to the Fish Tree of Life API |
| fishualize | Color Palettes Based on Fish Species |
| FisPro | Fuzzy Inference System Design and Optimization |
| FIT | Transcriptomic Dynamics Models in Field Conditions |
| fit.models | Compare Fitted Models |
| fitbitr | Interface with the 'Fitbit' API |
| fitbitScraper | Scrapes Data from Fitbit |
| fitbitViz | 'Fitbit' Visualizations |
| fitConic | Fit Data to Any Conic Section |
| fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |
| fitHeavyTail | Mean and Covariance Matrix Estimation under Heavy Tails |
| fitmix | Finite Mixture Model Fitting of Lifespan Datasets |
| fitODBOD | Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD |
| fitplc | Fit Hydraulic Vulnerability Curves |
| fitPoly | Genotype Calling for Bi-Allelic Marker Assays |
| fitscape | Classes for Fitness Landscapes and Seascapes |
| FITSio | FITS (Flexible Image Transport System) Utilities |
| fitteR | Fit Hundreds of Theoretical Distributions to Empirical Data |
| FitUltD | Fit Univariate Mixed and Usual Distributions |
| fitur | Fit Univariate Distributions |
| fitzRoy | Easily Scrape and Process AFL Data |
| fivethirtyeight | Data and Code Behind the Stories and Interactives at 'FiveThirtyEight' |
| FixedPoint | Algorithms for Finding Fixed Point Vectors of Functions |
| fixedTimeEvents | The Distribution of Distances Between Discrete Events in Fixed Time |
| fixerapi | An R Client for the "Fixer.io" Currency API |
| fixest | Fast Fixed-Effects Estimations |
| FixSeqMTP | Fixed Sequence Multiple Testing Procedures |
| fixtuRes | Mock Data Generator |
| fizzbuzzR | Fizz Buzz Implementation |
| FKF | Fast Kalman Filter |
| FKF.SP | Fast Kalman Filtering Through Sequential Processing |
| FKSUM | Fast Kernel Sums |
| flacco | Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems |
| flagr | Implementation of Flag Aggregation |
| flair | Highlight, Annotate, and Format your R Source Code |
| flam | Fits Piecewise Constant Models with Data-Adaptive Knots |
| FLAME | Interpretable Matching for Causal Inference |
| flametree | Generate Random Tree-Like Images |
| flamingos | Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') |
| flan | FLuctuation ANalysis on Mutation Models |
| flare | Family of Lasso Regression |
| flashCard | Create a Flash Card |
| flashClust | Implementation of optimal hierarchical clustering |
| flashlight | Shed Light on Black Box Machine Learning Models |
| flatness | Indices and Tests for Assessing the Flatness of (Rank) Histograms |
| flatr | Transforms Contingency Tables to Data Frames, and Analyses Them |
| flattabler | Obtaining a Flat Table from Pivot Tables |
| flatxml | Tools for Working with XML Files as R Dataframes |
| fledge | Smoother Change Tracking and Versioning for R Packages |
| flexclust | Flexible Cluster Algorithms |
| flexCWM | Flexible Cluster-Weighted Modeling |
| flexdashboard | R Markdown Format for Flexible Dashboards |
| FlexDir | Tools to Work with the Flexible Dirichlet Distribution |
| FlexDotPlot | Flexible Dot Plot |
| FlexGAM | Generalized Additive Models with Flexible Response Functions |
| flexiblas | 'FlexiBLAS' API Interface |
| flexmet | Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model |
| flexmix | Flexible Mixture Modeling |
| flexmixNL | Finite Mixture Modeling of Generalized Nonlinear Models |
| FlexParamCurve | Tools to Fit Flexible Parametric Curves |
| flexpolyline | Flexible Polyline Encoding |
| FlexReg | Regression Models for Bounded Responses |
| flexrsurv | Flexible Relative Survival Analysis |
| FlexScan | Flexible Scan Statistics |
| flexsurv | Flexible Parametric Survival and Multi-State Models |
| flexsurvcure | Flexible Parametric Cure Models |
| flextable | Functions for Tabular Reporting |
| FlickrAPI | Access to Flickr API |
| flifo | Don't Get Stuck with Stacks in R |
| flightplot | Plotting Flight Paths on Maps |
| FLightR | Reconstruct Animal Paths from Solar Geolocation Loggers Data |
| flightsbr | Download Flight and Airport Data from Brazil |
| flintyR | Flexible and Interpretable Non-Parametric Tests of Exchangeability |
| flip | Multivariate Permutation Tests |
| flipbookr | Parses Code, Creates Partial Code Builds, Delivers Code Movie |
| flipdownr | Implement a Countdown in 'RMarkdown' Documents and 'shiny' Applications |
| flipdownWidgets | A Wrapper of JavaScript Library 'flipdown.js' |
| flippant | Dithionite Scramblase Assay Analysis |
| flipr | Flexible Inference via Permutations in R |
| flipscores | Robust Score Testing in GLMs, by Sign-Flip Contributions |
| FLLat | Fused Lasso Latent Feature Model |
| float | 32-Bit Floats |
| flobr | Convert Files to and from Binary Objects (BLOBs) |
| flock | Process Synchronization Using File Locks |
| flood | Statistical Methods for the (Regional) Analysis of Flood Frequency |
| FloodFreqPlot | Flood Probability Plotting and Graphical Frequency Analysis |
| flora | Tools for Interacting with the Brazilian Flora 2020 |
| flow | View and Browse Code Using Flow Diagrams |
| flowr | Streamlining Design and Deployment of Complex Workflows |
| FlowRegEnvCost | The Environmental Costs of Flow Regulation |
| FlowScreen | Daily Streamflow Trend and Change Point Screening |
| flowTraceR | Tracing Information Flow for Inter-Software Comparisons in Mass Spectrometry-Based Bottom-Up Proteomics |
| FLR | Fuzzy Logic Rule Classifier |
| flsa | Path Algorithm for the General Fused Lasso Signal Approximator |
| FLSSS | Mining Rigs for Problems in the Subset Sum Family |
| FluMoDL | Influenza-Attributable Mortality with Distributed-Lag Models |
| fluoSurv | Estimate Insect Survival from Fluorescence Data |
| fluspect | Fluspect-B |
| flux | Flux Rate Calculation from Dynamic Closed Chamber Measurements |
| fluxweb | Estimate Energy Fluxes in Food Webs |
| flying | Simulation of Bird Flight Range |
| FlyingR | Simulation of Bird Flight Range |
| fm.index | Fast String Searching |
| fma | Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998) |
| fmbasics | Financial Market Building Blocks |
| FMC | Factorial Experiments with Minimum Level Changes |
| FMCCSD | Efficient Estimation of Clustered Current Status Data |
| fmcmc | A friendly MCMC framework |
| fmdates | Financial Market Date Calculations |
| FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis |
| fmerPack | Tools of Heterogeneity Pursuit via Finite Mixture Effects Model |
| fmf | Fast Class Noise Detector with Multi-Factor-Based Learning |
| FMM | Rhythmic Patterns Modeling by FMM Models |
| FMP | Filtered Monotonic Polynomial IRT Models |
| fmpcloudr | R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API |
| FMradio | Factor Modeling for Radiomics Data |
| fmri | Analysis of fMRI Experiments |
| fmriqa | Functional MRI Quality Assurance Routines |
| fMRIscrub | Scrubbing and Other Data Cleaning Routines for fMRI |
| fmsb | Functions for Medical Statistics Book with some Demographic Data |
| FMsmsnReg | Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors |
| FMStable | Finite Moment Stable Distributions |
| fmtr | Easily Apply Formats to Data |
| fMultivar | Rmetrics - Modeling of Multivariate Financial Return Distributions |
| FNN | Fast Nearest Neighbor Search Algorithms and Applications |
| fNonlinear | Rmetrics - Nonlinear and Chaotic Time Series Modelling |
| FOCI | Feature Ordering by Conditional Independence |
| focusedMDS | Focused, Interactive Multidimensional Scaling |
| foghorn | Summarize CRAN Check Results in the Terminal |
| foieGras | Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour |
| folderfun | Creates and Manages Folder Functions for Portable Large-Scale R Analysis |
| folio | Datasets for Teaching Archaeology and Paleontology |
| fomantic.plus | Add Extra 'Fomantic UI' Components to 'shiny.semantic' |
| fontawesome | Easily Work with 'Font Awesome' Icons |
| fontBitstreamVera | Fonts with 'Bitstream Vera Fonts' License |
| fontcm | Computer Modern font for use with extrafont package |
| fontLiberation | Liberation Fonts |
| fontquiver | Set of Installed Fonts |
| foodingraph | Food Network Inference and Visualization |
| foolbox | Function Manipulation Toolbox |
| footballpenaltiesBL | Penalties in the German Men's Football Bundesliga |
| footBayes | Fitting Bayesian and MLE Football Models |
| footprint | Calculate Air Travel Emissions |
| foqat | Field Observation Quick Analysis Toolkit |
| ForagingOrg | Organization Measures for Visual Foraging |
| forams | Foraminifera and Community Ecology Analyses |
| forcats | Tools for Working with Categorical Variables (Factors) |
| forceR | Force Measurement Analyses |
| foreach | Provides Foreach Looping Construct |
| ForeCA | Forecastable Component Analysis |
| forecast | Forecasting Functions for Time Series and Linear Models |
| ForecastComb | Forecast Combination Methods |
| ForecastCombinations | Forecast Combinations |
| forecasteR | Time Series Forecast System |
| forecastHybrid | Convenient Functions for Ensemble Time Series Forecasts |
| forecastML | Time Series Forecasting with Machine Learning Methods |
| forecastSNSTS | Forecasting for Stationary and Non-Stationary Time Series |
| ForecastTB | Test Bench for the Comparison of Forecast Methods |
| FoReco | Point Forecast Reconciliation |
| forecTheta | Forecasting Time Series by Theta Models |
| foreign | Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ... |
| foreSIGHT | Systems Insights from Generation of Hydroclimatic Timeseries |
| forestControl | Approximate False Positive Rate Control in Selection Frequency for Random Forest |
| ForestDisc | Forest Discretization |
| forestecology | Fitting and Assessing Neighborhood Models of the Effect of Interspecific Competition on the Growth of Trees |
| forestError | A Unified Framework for Random Forest Prediction Error Estimation |
| ForestFit | Statistical Modelling for Plant Size Distributions |
| ForestGapR | Tropical Forest Canopy Gaps Analysis |
| forestHES | Forest Health Evaluation System at the Forest Stand Level in China |
| forestinventory | Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories |
| forestmangr | Forest Mensuration and Management |
| forestmodel | Forest Plots from Regression Models |
| forestplot | Advanced Forest Plot Using 'grid' Graphics |
| forestploter | Create Flexible Forest Plot |
| forestr | Ecosystem and Canopy Structural Complexity Metrics from LiDAR |
| forestRK | Implements the Forest-R.K. Algorithm for Classification Problems |
| forestry | Reshape Data Tree |
| ForestTools | Analyzing Remotely Sensed Forest Data |
| foretell | Projecting Customer Retention Based on Fader and Hardie Probability Models |
| forge | Casting Values into Shape |
| forImage | Foraminiferal Image Analysis and Test Measurement |
| ForIT | Functions to Estimate Tree Volume and Phytomass in the Italian Forest Inventory 2005 |
| formatR | Format R Code Automatically |
| formattable | Create 'Formattable' Data Structures |
| formatters | ASCII Formatting for Values and Tables |
| Formula | Extended Model Formulas |
| formula.tools | Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects |
| formulaic | Dynamic Generation and Quality Checks of Formula Objects |
| formulops | Mathematical Operations on R Formula |
| forplo | Flexible Forest Plots |
| forrel | Forensic Pedigree Analysis and Relatedness Inference |
| forsearch | Outlier Diagnostics for Some Linear Effects and Linear Mixed Effects Models |
| FORTLS | Automatic Processing of Terrestrial-Based Technologies Point Cloud Data for Forestry Purposes |
| fortunes | R Fortunes |
| forward | Robust Analysis using Forward Search |
| forwards | Data from Surveys Conducted by Forwards |
| fossil | Palaeoecological and Palaeogeographical Analysis Tools |
| fossilbrush | Automated Cleaning of Fossil Occurrence Data |
| FossilSim | Simulation of Fossil and Taxonomy Data |
| FossilSimShiny | Shiny Application for 'FossilSim' |
| foster | Forest Structure Extrapolation with R |
| foto | Fourier Transform Textural Ordination |
| FourgameteP | FourGamete Test |
| fourierin | Computes Numeric Fourier Integrals |
| fourPNO | Bayesian 4 Parameter Item Response Model |
| FourScores | A Game for Human vs. Human or Human vs. AI |
| FourWayHMM | Parsimonious Hidden Markov Models for Four-Way Data |
| fpa | Spatio-Temporal Fixation Pattern Analysis |
| fpc | Flexible Procedures for Clustering |
| FPCA2D | Two Dimensional Functional Principal Component Analysis |
| FPCA3D | Three Dimensional Functional Component Analysis |
| fpcb | Predictive Confidence Bands for Functional Time Series Forecasting |
| fpCompare | Reliable Comparison of Floating Point Numbers |
| FPDclustering | PD-Clustering and Factor PD-Clustering |
| fpeek | Check Text Files Content at a Glance |
| fpest | Estimating Finite Population Total |
| FPLdata | Read in Fantasy Premier League Data |
| fplot | Automatic Distribution Graphs Using Formulas |
| fplyr | Apply Functions to Blocks of Files |
| fpop | Segmentation using Optimal Partitioning and Function Pruning |
| fpopw | Weighted Segmentation using Functional Pruning and Optimal Partioning |
| fPortfolio | Rmetrics - Portfolio Selection and Optimization |
| fpow | Computing the noncentrality parameter of the noncentral F distribution |
| fpp | Data for "Forecasting: principles and practice" |
| fpp2 | Data for "Forecasting: Principles and Practice" (2nd Edition) |
| fpp3 | Data for "Forecasting: Principles and Practice" (3rd Edition) |
| fptdApprox | Approximation of First-Passage-Time Densities for Diffusion Processes |
| FPV | Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment |
| fracdiff | Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |
| fracdist | Numerical CDFs for Fractional Unit Root and Cointegration Tests |
| FracKrigingR | Spatial Multivariate Data Modeling |
| fracprolif | Fraction Proliferation via a Quiescent Growth Model |
| fractaldim | Estimation of Fractal Dimensions |
| FractalParameterEstimation | Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model |
| fractD | Estimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images |
| FRACTION | Numeric number into fraction |
| fractional | Vulgar Fractions in R |
| fracture | Convert Decimals to Fractions |
| fragility | Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes |
| Fragman | Fragment Analysis in R |
| frailtyEM | Fitting Frailty Models with the EM Algorithm |
| frailtyHL | Frailty Models via Hierarchical Likelihood |
| frailtypack | Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints |
| frailtySurv | General Semiparametric Shared Frailty Model |
| frair | Tools for Functional Response Analysis |
| framecleaner | Clean Data Frames |
| Frames2 | Estimation in Dual Frame Surveys |
| franc | Detect the Language of Text |
| FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |
| frapplot | Automatic Data Processing and Visualization for FRAP |
| frbs | Fuzzy Rule-Based Systems for Classification and Regression Tasks |
| frechet | Statistical Analysis for Random Objects and Non-Euclidean Data |
| fredr | An R Client for the 'FRED' API |
| free | Flexible Regularized Estimating Equations |
| freealg | The Free Algebra |
| freedom | Demonstration of Disease Freedom (DDF) |
| freegroup | The Free Group |
| FreeSortR | Free Sorting Data Analysis |
| freesurferformats | Read and Write 'FreeSurfer' Neuroimaging File Formats |
| FREEtree | Tree Method for High Dimensional Longitudinal Data |
| fRegression | Rmetrics - Regression Based Decision and Prediction |
| frenchCurve | Generate Open or Closed Interpolating Curves |
| frenchdata | Download Data Sets from Kenneth's French Finance Data Library Site |
| FREQ | FREQ: Estimate population size from capture frequencies |
| freqdist | Frequency Distribution |
| freqdistributionNogives | Automated Cumulative Frequency Plots for Grouped Distribution |
| freqdom | Frequency Domain Based Analysis: Dynamic PCA |
| freqdom.fda | Functional Time Series: Dynamic Functional Principal Components |
| freqparcoord | Novel Methods for Parallel Coordinates |
| freqpcr | Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk Samples |
| FreqProf | Frequency Profiles Computing and Plotting |
| freqtables | Make Quick Descriptive Tables for Categorical Variables |
| frequency | Easy Frequency Tables |
| frequencyConnectedness | Spectral Decomposition of Connectedness Measures |
| frequentdirections | Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching |
| frequentistSSD | Screened Selection Design with Survival Endpoints |
| FRESA.CAD | Feature Selection Algorithms for Computer Aided Diagnosis |
| fresh | Create Custom 'Bootstrap' Themes to Use in 'Shiny' |
| FRESHD | Fast Robust Estimation of Signals in Heterogeneous Data |
| FrF2 | Fractional Factorial Designs with 2-Level Factors |
| FrF2.catlg128 | Catalogues of Resolution IV 128 Run 2-Level Fractional Factorials Up to 33 Factors that Do Have 5-Letter Words |
| frictionless | Read and Write Frictionless Data Packages |
| friends | The Entire Transcript from Friends in Tidy Format |
| fritools | Utilities for the Forest Research Institute of the State Baden-Wuerttemberg |
| FRK | Fixed Rank Kriging |
| fRLR | Fit Repeated Linear Regressions |
| frmhet | Regression Analysis of Fractional Responses Under Unobserved Heterogeneity |
| frmpd | Regression Analysis of Panel Fractional Responses |
| fromo | Fast Robust Moments |
| frontier | Stochastic Frontier Analysis |
| frostr | R API to MET Norway's 'Frost' API |
| frscore | Functions for Calculating Fit-Robustness of CNA-Solutions |
| fruclimadapt | Evaluation Tools for Assessing Climate Adaptation of Fruit Tree Species |
| fs | Cross-Platform File System Operations Based on 'libuv' |
| FSA | Simple Fisheries Stock Assessment Methods |
| FSAdata | Data to Support Fish Stock Assessment ('FSA') Package |
| fsbrain | Managing and Visualizing Brain Surface Data |
| fscaret | Automated Feature Selection from 'caret' |
| FSDAM | Forward Stepwise Deep Autoencoder-Based Monotone NLDR |
| fsdaR | Robust Data Analysis Through Monitoring and Dynamic Visualization |
| FSelector | Selecting Attributes |
| FSelectorRcpp | 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support |
| fsia | Import and Analysis of OMR Data from FormScanner |
| FSinR | Feature Selection |
| FSInteract | Fast Searches for Interactions |
| FSK2R | An Interface Between the 'FSKX' Standard and 'R' |
| FSM | Finite Selection Model |
| fsMTS | Feature Selection for Multivariate Time Series |
| FSMUMI | Imputation of Time Series Based on Fuzzy Logic |
| fsn | Rosenthal's Fail Safe Number and Related Functions |
| fso | Fuzzy Set Ordination |
| fspe | Estimating the Number of Factors in EFA with Out-of-Sample Prediction Errors |
| fsr | Handling Fuzzy Spatial Data |
| fSRM | Social Relations Analyses with Roles ("Family SRM") |
| fssemR | Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network |
| FSSF | Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube |
| fst | Lightning Fast Serialization of Data Frames |
| fst4pg | Genetic Distance Segmentation for Population Genetics |
| Fstability | Calculate Feature Stability |
| fstcore | R Bindings to the 'Fstlib' Library |
| fsthet | Fst-Heterozygosity Smoothed Quantiles |
| FSTpackage | Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores |
| ftaproxim | Fault Tree Analysis Based on Proxel Simulation |
| ftDK | A Wrapper for the API of the Danish Parliament |
| ftExtra | Extensions for 'Flextable' |
| fTrading | Rmetrics - Trading and Rebalancing Financial Instruments |
| ftrCOOL | Feature Extraction from Biological Sequences |
| ftsa | Functional Time Series Analysis |
| ftsspec | Spectral Density Estimation and Comparison for Functional Time Series |
| fuel | Framework for Unified Estimation in Lognormal Models |
| fueleconomy | EPA Fuel Economy Data |
| fugue | Sensitivity Analysis Optimized for Matched Sets of Varied Sizes |
| fullfact | Full Factorial Breeding Analysis |
| fullROC | Plot Full ROC Curves using Eyewitness Lineup Data |
| fun | Use R for Fun |
| func2vis | Clean and Visualize Over Expression Results from 'ConsensusPathDB' |
| FunCC | Functional Cheng and Church Bi-Clustering |
| funcharts | Functional Control Charts |
| funchir | Convenience Functions by Michael Chirico |
| FunChisq | Model-Free Functional Chi-Squared and Exact Tests |
| FuncMap | Hive Plots of R Package Function Calls |
| FuncNN | Functional Neural Networks |
| functClust | Functional Clustering of Redundant Components of a System |
| functional | Curry, Compose, and other higher-order functions |
| functiondepends | Find Functions and their Dependencies |
| funData | An S4 Class for Functional Data |
| fundiversity | Easy Computation of Alpha Functional Diversity Indices |
| funFEM | Clustering in the Discriminative Functional Subspace |
| fungible | Psychometric Functions from the Waller Lab |
| funGp | Gaussian Process Models for Scalar and Functional Inputs |
| funHDDC | Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces |
| funique | A Faster Unique Function |
| fUnitRoots | Rmetrics - Modelling Trends and Unit Roots |
| funLBM | Model-Based Co-Clustering of Functional Data |
| funmediation | Functional Mediation for a Distal Outcome |
| funModeling | Exploratory Data Analysis and Data Preparation Tool-Box |
| funneljoin | Time-Based Joins to Analyze Sequences of Events |
| FunnelPlotR | Funnel Plots for Comparing Institutional Performance |
| funnelR | Funnel Plots for Proportion Data |
| funprog | Functional Programming |
| funr | Simple Utility Providing Terminal Access to all R Functions |
| funrar | Functional Rarity Indices Computation |
| funreg | Functional Regression for Irregularly Timed Data |
| FUNTA | Functional Tangential Angle Pseudo-Depth |
| funtimes | Functions for Time Series Analysis |
| FunWithNumbers | Fun with Fractions and Number Sequences |
| furniture | Furniture for Quantitative Scientists |
| furrr | Apply Mapping Functions in Parallel using Futures |
| fusen | Build a Package from Rmarkdown File |
| fuser | Fused Lasso for High-Dimensional Regression over Groups |
| fusionchartsR | Embedding 'FusionCharts Javascript' Library in R |
| fusionclust | Clustering and Feature Screening using L1 Fusion Penalty |
| FusionLearn | Fusion Learning |
| futile.logger | A Logging Utility for R |
| futile.options | Futile Options Management |
| futility | Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up |
| future | Unified Parallel and Distributed Processing in R for Everyone |
| future.apply | Apply Function to Elements in Parallel using Futures |
| future.batchtools | A Future API for Parallel and Distributed Processing using 'batchtools' |
| future.callr | A Future API for Parallel Processing using 'callr' |
| future.tests | Test Suite for 'Future API' Backends |
| futureheatwaves | Find, Characterize, and Explore Extreme Events in Climate Projections |
| fuzzr | Fuzz-Test R Functions |
| Fuzzy.p.value | Computing Fuzzy p-Value |
| FuzzyAHP | (Fuzzy) AHP Calculation |
| FuzzyClass | Fuzzy and Non-Fuzzy Classifiers |
| fuzzyforest | Fuzzy Forests |
| fuzzyjoin | Join Tables Together on Inexact Matching |
| FuzzyLP | Fuzzy Linear Programming |
| FuzzyM | Fuzzy Cognitive Maps Operations |
| FuzzyMCDM | Multi-Criteria Decision Making Methods for Fuzzy Data |
| FuzzyNumbers | Tools to Deal with Fuzzy Numbers |
| FuzzyNumbers.Ext.2 | Apply Two Fuzzy Numbers on a Monotone Function |
| FuzzyQ | Fuzzy Quantification of Common and Rare Species |
| FuzzyR | Fuzzy Logic Toolkit for R |
| fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |
| fuzzyreg | Fuzzy Linear Regression |
| FuzzyResampling | Resampling Methods for Triangular and Trapezoidal Fuzzy Numbers |
| fuzzySim | Fuzzy Similarity in Species Distributions |
| FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |
| FuzzyStatTra | Statistical Methods for Trapezoidal Fuzzy Numbers |
| FuzzySTs | Fuzzy Statistical Tools |
| fuzzywuzzyR | Fuzzy String Matching |
| FWDselect | Selecting Variables in Regression Models |
| fwi.fbp | Fire Weather Index System and Fire Behaviour Prediction System Calculations |
| fwildclusterboot | Fast Wild Cluster Bootstrap Inference for Linear Models |
| FWRGB | Fresh Weight Determination from Visual Image of the Plant |
| fwsim | Fisher-Wright Population Simulation |
| fxregime | Exchange Rate Regime Analysis |
| fxTWAPLS | An Improved Version of WA-PLS |
| fy | Utilities for Financial Years |
| g.data | Delayed-Data Packages |
| g2f | Find and Fill Gaps in Metabolic Networks |
| G2Sd | Grain-Size Statistics and Description of Sediment |
| GA | Genetic Algorithms |
| GAabbreviate | Abbreviating Items Measures using Genetic Algorithms |
| GACFF | Genetic Similarity in User-Based Collaborative Filtering |
| GAD | GAD: Analysis of variance from general principles |
| GADAG | A Genetic Algorithm for Learning Directed Acyclic Graphs |
| gadget2 | Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox |
| GADMTools | Easy Use of 'GADM' Maps |
| gafit | Genetic Algorithm for Curve Fitting |
| gaiah | Genetic and Isotopic Assignment Accounting for Habitat Suitability |
| gainML | Machine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators |
| gains | Lift (Gains) Tables and Charts |
| GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |
| galah | Atlas of Living Australia (ALA) Data and Resources in R |
| galigor | Collection of Packages for Internet Marketing |
| GALLO | Genomic Annotation in Livestock for Positional Candidate LOci |
| galts | Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation |
| galvanizer | Interface to Galvanize 'Highbond' Internal Audit Software |
| gam | Generalized Additive Models |
| gamair | Data for 'GAMs: An Introduction with R' |
| gambin | Fit the Gambin Model to Species Abundance Distributions |
| gamblers.ruin.gameplay | One-Dimensional Random Walks Through Simulation of the Gambler's Ruin Problem |
| gamboostLSS | Boosting Methods for 'GAMLSS' |
| gamboostMSM | Boosting Multistate Models |
| gamclass | Functions and Data for a Course on Modern Regression and Classification |
| gamCopula | Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas |
| GAMens | Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification |
| gameofthrones | Palettes Inspired in the TV Show "Game of Thrones" |
| gameR | Color Palettes Inspired by Video Games |
| gamesGA | Genetic Algorithm for Sequential Symmetric Games |
| GameTheory | Cooperative Game Theory |
| GameTheoryAllocation | Tools for Calculating Allocations in Game Theory |
| gamlr | Gamma Lasso Regression |
| gamlss | Generalised Additive Models for Location Scale and Shape |
| gamlss.add | Extra Additive Terms for Generalized Additive Models for Location Scale and Shape |
| gamlss.cens | Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions |
| gamlss.countKinf | Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions |
| gamlss.data | Data for Generalised Additive Models for Location Scale and Shape |
| gamlss.demo | Demos for GAMLSS |
| gamlss.dist | Distributions for Generalized Additive Models for Location Scale and Shape |
| gamlss.foreach | Parallel Computations for Distributional Regression |
| gamlss.ggplots | Plotting Generalised Additive Model for Location, Scale and Shape |
| gamlss.inf | Fitting Mixed (Inflated and Adjusted) Distributions |
| gamlss.lasso | Extra Lasso-Type Additive Terms for GAMLSS |
| gamlss.mx | Fitting Mixture Distributions with GAMLSS |
| gamlss.spatial | Spatial Terms in Generalized Additive Models for Location Scale and Shape Models |
| gamlss.tr | Generating and Fitting Truncated ‘gamlss.family’ Distributions |
| gamlssbssn | Bimodal Skew Symmetric Normal Distribution |
| gamm4 | Generalized Additive Mixed Models using 'mgcv' and 'lme4' |
| Gammareg | Classic Gamma Regression: Joint Modeling of Mean and Shape Parameters |
| gammSlice | Generalized Additive Mixed Model Analysis via Slice Sampling |
| gamreg | Robust and Sparse Regression via Gamma-Divergence |
| gamRR | Calculate the RR for the GAM |
| gamsel | Fit Regularization Path for Generalized Additive Models |
| gamselBayes | Bayesian Generalized Additive Model Selection |
| ganalytics | Interact with 'Google Analytics' |
| ganDataModel | Create a Hierarchical, Categorical Data Model for a Data Source |
| ganGenerativeData | Generate Generative Data for a Data Source |
| GANPA | Gene Association Network-Based Pathway Analysis (GANPA) |
| GANPAdata | The GANPA Datasets Package |
| gap | Genetic Analysis Package |
| gap.datasets | Datasets for 'gap' |
| GapAnalysis | Conservation Indicators using Spatial Information |
| GAparsimony | Searching Parsimony Models with Genetic Algorithms |
| gapclosing | Estimate Gaps Under an Intervention |
| gapfill | Fill Missing Values in Satellite Data |
| gapmap | Drawing Gapped Cluster Heatmap with 'ggplot2' |
| gapminder | Data from Gapminder |
| GARCHIto | Class of GARCH-Ito Models |
| GARCHSK | Estimating a GARCHSK Model and GJRSK Model |
| garchx | Flexible and Robust GARCH-X Modelling |
| GARCOM | Gene and Region Counting of Mutations ("GARCOM") |
| gargle | Utilities for Working with Google APIs |
| gargoyle | An Event-Based Mechanism for 'Shiny' |
| garma | Fitting and Forecasting Gegenbauer ARMA Time Series Models |
| garray | Generalized Array Arithmetic for Ragged Arrays with Named Margins |
| GAS | Generalized Autoregressive Score Models |
| gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |
| gasfluxes | Greenhouse Gas Flux Calculation from Chamber Measurements |
| GaSP | Train and Apply a Gaussian Stochastic Process Model |
| gasper | Graph Signal Processing |
| gastempt | Analyzing Gastric Emptying from MRI or Scintigraphy |
| gaston | Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models |
| gatepoints | Easily Gate or Select Points on a Scatter Plot |
| GauPro | Gaussian Process Fitting |
| gauseR | Lotka-Volterra Models for Gause's 'Struggle for Existence' |
| gausscov | The Gaussian Covariate Method for Variable Selection |
| gaussDiff | Difference measures for multivariate Gaussian probability density functions |
| gaussfacts | The Greatest Mathematician Since Antiquity |
| GaussianHMM1d | Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models |
| gaussplotR | Fit, Predict and Plot 2D Gaussians |
| gaussquad | Collection of Functions for Gaussian Quadrature |
| GaussSuppression | Tabular Data Suppression using Gaussian Elimination |
| gawdis | Multi-Trait Dissimilarity with more Uniform Contributions |
| gazepath | Parse Eye-Tracking Data into Fixations |
| gb | Generalize Lambda Distribution and Generalized Bootstrapping |
| GB2 | Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation |
| GB2group | Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data |
| gbeta | Generalized Beta and Beta Prime Distributions |
| gbfs | Interface with Live Bikeshare Data |
| gbifdb | High Performance Interface to 'GBIF' |
| GBJ | Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies |
| gbm | Generalized Boosted Regression Models |
| gbm.auto | Automated Boosted Regression Tree Modelling and Mapping Suite |
| gbm2sas | Convert GBM Object Trees to SAS Code |
| gbmt | Group-Based Multivariate Trajectory Modeling |
| gbp | A Bin Packing Problem Solver |
| gbRd | Utilities for processing Rd objects and files |
| gbs2ploidy | Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data |
| gbts | Hyperparameter Search for Gradient Boosted Trees |
| gbutils | Utilities for Simulation, Plots, Quantile Functions and Programming |
| GCalcium | A Data Manipulation and Analysis Package for Calcium Indicator Data |
| GCalignR | Simple Peak Alignment for Gas-Chromatography Data |
| gCat | Graph-Based Two-Sample Tests for Categorical Data |
| gcbd | 'GPU'/CPU Benchmarking in Debian-Based Systems |
| GCD | Global Charcoal Database |
| gcdnet | The (Adaptive) LASSO and Elastic Net Penalized Least Squares, Logistic Regression, Hybrid Huberized Support Vector Machines, Squared Hinge Loss Support Vector Machines and Expectile Regression using a Fast Generalized Coordinate Descent Algorithm |
| gcerisk | Generalized Competing Event Model |
| gcite | Google Citation Parser |
| gcKrig | Analysis of Geostatistical Count Data using Gaussian Copulas |
| gclm | Graphical Continuous Lyapunov Models |
| gclus | Clustering Graphics |
| gcmr | Gaussian Copula Marginal Regression |
| gconsensus | Consensus Value Constructor |
| gcookbook | Data for "R Graphics Cookbook" |
| GCPBayes | Bayesian Meta-Analysis of Pleiotropic Effects Using Group Structure |
| GCPM | Generalized Credit Portfolio Model |
| GCSM | Implements Generic Composite Similarity Measure |
| gcTensor | Generalized Coupled Tensor Factorization |
| GD | Geographical Detectors for Assessing Spatial Factors |
| GDAdata | Datasets for the Book Graphical Data Analysis with R |
| gdalcubes | Earth Observation Data Cubes from Satellite Image Collections |
| gdalUtilities | Wrappers for 'GDAL' Utilities Executables |
| gdata | Various R Programming Tools for Data Manipulation |
| GDAtools | A Toolbox for Geometric Data Analysis and More |
| gde | GBIF Dataset Explorer |
| gDefrag | Graph-Based Landscape De-Fragmentation |
| gdiff | Graphical Difference Testing |
| GDINA | The Generalized DINA Model Framework |
| gdistance | Distances and Routes on Geographical Grids |
| gdm | Generalized Dissimilarity Modeling |
| gdpc | Generalized Dynamic Principal Components |
| GDPuc | Easily Convert GDP Data |
| gds | Descriptive Statistics of Grouped Data |
| GDSARM | Gauss - Dantzig Selector: Aggregation over Random Models |
| gdtools | Utilities for Graphical Rendering |
| gdxdt | IO for GAMS GDX Files using 'data.table' |
| GE | General Equilibrium Modeling |
| gear | Geostatistical Analysis in R |
| geckor | R Client for the 'CoinGecko' API |
| GeDS | Geometrically Designed Spline Regression |
| gee | Generalized Estimation Equation Solver |
| GEEaSPU | Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) |
| geeasy | Solve Generalized Estimating Equations for Clustered Data |
| geeCRT | Bias-Corrected GEE for Cluster Randomized Trials |
| geecure | Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations |
| geeM | Solve Generalized Estimating Equations |
| GEEmediate | Mediation Analysis for Generalized Linear Models Using the Difference Method |
| geepack | Generalized Estimating Equation Package |
| geesmv | Modified Variance Estimators for Generalized Estimating Equations |
| geex | An API for M-Estimation |
| geigen | Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack |
| geiger | Analysis of Evolutionary Diversification |
| GEInfo | Gene-Environment Interaction Analysis Incorporating Prior Information |
| GEint | Misspecified Models for Gene-Environment Interaction |
| GEInter | Robust Gene-Environment Interaction Analysis |
| gellipsoid | Generalized Ellipsoids |
| gelnet | Generalized Elastic Nets |
| gemlog | File Conversion for 'Gem Infrasound Logger' |
| gemma2 | GEMMA Multivariate Linear Mixed Model |
| gems | Generalized Multistate Simulation Model |
| gemtc | Network Meta-Analysis Using Bayesian Methods |
| gen2stage | Generalized Two-Stage Designs for Phase II Single-Arm Studies |
| gen3sis | General Engine for Eco-Evolutionary Simulations |
| gen5helper | Processing 'Gen5' 2.06 Exported Data |
| genalg | R Based Genetic Algorithm |
| GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |
| genBaRcode | Analysis and Visualization Tools for Genetic Barcode Data |
| GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |
| gencor | Generate Customized Correlation Matrices |
| gendata | Generate and Modify Synthetic Datasets |
| gender | Predict Gender from Names Using Historical Data |
| genderBR | Predict Gender from Brazilian First Names |
| GenderInfer | This is a Collection of Functions to Analyse Gender Differences |
| gendist | Generated Probability Distribution Models |
| GENEAclassify | Segmentation and Classification of Accelerometer Data |
| GENEAread | Package for Reading Binary Files |
| GENEAsphere | Visualisation of Raw or Segmented Accelerometer Data |
| GeneCycle | Identification of Periodically Expressed Genes |
| geneExpressionFromGEO | Easily Downloads a Gene Expression Dataset from a GEO Code and Retrieves the Gene Symbols of Its Probesets |
| GeneF | Package for Generalized F-Statistics |
| geneHummus | A Pipeline to Define Gene Families in Legumes and Beyond |
| genekitr | Gene Analysis Toolkit in R |
| genemodel | Gene Model Plotting in R |
| GeneNet | Modeling and Inferring Gene Networks |
| genepi | Genetic Epidemiology Design and Inference |
| genepop | Population Genetic Data Analysis Using Genepop |
| generalCorr | Generalized Correlations, Causal Paths and Portfolio Selection |
| generalhoslem | Goodness of Fit Tests for Logistic Regression Models |
| GeneralisedCovarianceMeasure | Test for Conditional Independence Based on the Generalized Covariance Measure (GCM) |
| GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |
| GeneralizedUmatrix | Credible Visualization for Two-Dimensional Projections of Data |
| GeneralizedWendland | Fully Parameterized Generalized Wendland Covariance Function |
| GeneralOaxaca | Blinder-Oaxaca Decomposition for Generalized Linear Model |
| generator | Generate Data Containing Fake Personally Identifiable Information |
| GenericML | Generic Machine Learning Inference |
| generics | Common S3 Generics not Provided by Base R Methods Related to Model Fitting |
| genero | Estimate Gender from Names in Spanish and Portuguese |
| geneset | Get Gene Sets for Gene Enrichment Analysis |
| GenEst | Generalized Mortality Estimator |
| genesysr | Genesys PGR Client |
| geneticae | Statistical Tools for the Analysis of Multi Environment Agronomic Trials |
| genetics | Population Genetics |
| GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |
| GeNetIt | Spatial Graph-Theoretic Genetic Gravity Modelling |
| GenHMM1d | Goodness-of-Fit for Univariate Hidden Markov Models |
| genie | Fast, Robust, and Outlier Resistant Hierarchical Clustering |
| genieBPC | Project GENIE BioPharma Collaborative Data Processing Pipeline |
| genieclust | The Genie++ Hierarchical Clustering Algorithm with Noise Points Detection |
| genio | Genetics Input/Output Functions |
| genius | Easily Access Song Lyrics from Genius.com |
| geniusr | Tools for Working with the 'Genius' API |
| GENLIB | Genealogical Data Analysis |
| genlogis | Generalized Logistic Distribution |
| GenMarkov | Multivariate Markov Chains |
| GENMETA | Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm |
| geno2proteo | Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci |
| genodds | Generalised Odds Ratios |
| genogeographer | Methods for Analysing Forensic Ancestry Informative Markers |
| GenomeAdapt | Detecting Signatures of Local Adaptation Based on Ancestry Trajectories |
| GenomeAdmixR | Simulate Admixture of Genomes |
| genomeplot | 'Plot genome wide values for all chromosomes' |
| genomic.autocorr | Models Dealing with Spatial Dependency in Genomic Data |
| GenomicMating | Efficient Breeding by Genomic Mating |
| genomicper | Circular Genomic Permutation using Genome Wide Association p-Values |
| GenomicTools | Collection of Tools for Genomic Data Analysis |
| GenomicTools.fileHandler | File Handlers for Genomic Data Analysis |
| genoPlotR | Plot Publication-Grade Gene and Genome Maps |
| GenOrd | Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions |
| GenoScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
| genpathmox | Pathmox Approach Segmentation Tree Analysis |
| genpwr | Power Calculations Under Genetic Model Misspecification |
| genridge | Generalized Ridge Trace Plots for Ridge Regression |
| GenSA | Generalized Simulated Annealing |
| genscore | Generalized Score Matching Estimators |
| genSEIR | Predict Epidemic Curves with Generalized SEIR Modeling |
| genset | Generates Data Sets for Class Demonstrations |
| gensphere | Generalized Spherical Distributions |
| genstab | Resampling Based Yield Stability Analyses |
| genSurv | Generating Multi-State Survival Data |
| gensvm | A Generalized Multiclass Support Vector Machine |
| GenTag | Generate Color Tag Sequences |
| genTS | R Shiny App for Creating Simplified Trial Summary (TS) Domain |
| geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |
| GeoBoxplot | Geographic Box Plot |
| geocacheR | Tools for Geocaching |
| geocmeans | Implementing Methods for Spatial Fuzzy Unsupervised Classification |
| geodaData | Spatial Analysis Datasets for Teaching |
| geodata | Download Geographic Data |
| GeodesiCL | Geometric Geodesy Functions |
| geodetector | Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation |
| geodimension | Definition of Geographic Dimensions |
| geodist | Fast, Dependency-Free Geodesic Distance Calculations |
| geodiv | Methods for Calculating Gradient Surface Metrics |
| geodrawr | Making Geospatial Objects |
| GeodRegr | Geodesic Regression |
| geoelectrics | 3D-Visualization of Geoelectric Resistivity Measurement Profiles |
| geofabrik | Downloading Open Street Map Data |
| geofacet | 'ggplot2' Faceting Utilities for Geographical Data |
| geofd | Spatial Prediction for Function Value Data |
| geofi | Access Finnish Geospatial Data |
| GeoFIS | Spatial Data Processing for Decision Making |
| geoFKF | Kriging Method for Spatial Functional Data |
| geoFourierFDA | Ordinary Functional Kriging Using Fourier Smoothing and Gaussian Quadrature |
| geogrid | Turn Geospatial Polygons into Regular or Hexagonal Grids |
| geohashTools | Tools for Working with Geohashes |
| geojson | Classes for 'GeoJSON' |
| geojsonio | Convert Data from and to 'GeoJSON' or 'TopoJSON' |
| geojsonlint | Tools for Validating 'GeoJSON' |
| geojsonR | A GeoJson Processing Toolkit |
| geojsonsf | GeoJSON to Simple Feature Converter |
| geoknife | Web-Processing of Large Gridded Datasets |
| geomander | Geographic Tools for Studying Gerrymandering |
| GEOmap | Topographic and Geologic Mapping |
| geomapdata | Data for Topographic and Geologic Mapping |
| geomaroc | Easily Visualize Geographic Data of Morocco |
| GeomComb | (Geometric) Forecast Combination Methods |
| geomedb | Functions for Fetching 'GeOMe-db' Data |
| geomerge | Geospatial Data Integration |
| geometa | Tools for Reading and Writing ISO/OGC Geographic Metadata |
| geometr | Generate and Modify Interoperable Geometric Shapes |
| geometries | Convert Between R Objects and Geometric Structures |
| geometry | Mesh Generation and Surface Tessellation |
| GeoMongo | Geospatial Queries Using 'PyMongo' |
| geomorph | Geometric Morphometric Analyses of 2D/3D Landmark Data |
| geomtextpath | Curved Text in 'ggplot2' |
| geonames | Interface to the "Geonames" Spatial Query Web Service |
| geonapi | 'GeoNetwork' API R Interface |
| geonet | Intensity Estimation on Geometric Networks with Penalized Splines |
| geonetwork | Geographic Networks |
| geophys | Geophysics, Continuum Mechanics, Gravity Modeling |
| geoR | Analysis of Geostatistical Data |
| GeoRange | Calculating Geographic Range from Occurrence Data |
| geos | Open Source Geometry Engine ('GEOS') R API |
| geoSAE | Geoadditive Small Area Model |
| geosapi | GeoServer REST API R Interface |
| geoscale | Geological Time Scale Plotting |
| geosed | Smallest Enclosing Disc for Latitude and Longitude Points |
| geosimilarity | Geographically Optimal Similarity |
| geospark | Bring Local Sf to Spark |
| geosphere | Spherical Trigonometry |
| geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |
| geosptdb | Spatio-Temporal Radial Basis Functions with Distance-Based Methods (Optimization, Prediction and Cross Validation) |
| geostan | Bayesian Spatial Analysis |
| geostats | An Introduction to Statistics for Geoscientists |
| GeoTcgaData | Processing various types of data on GEO and TCGA |
| geotools | Geo tools |
| geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |
| geoTS | Methods for Handling and Analyzing Time Series of Satellite Images |
| geouy | Geographic Information of Uruguay |
| geoviz | Elevation and GPS Data Visualisation |
| geovol | Geopolitical Volatility (GEOVOL) Modelling |
| GeoWeightedModel | User-Friendly Interface for Geographically-Weighted Models |
| geozoo | Zoo of Geometric Objects |
| gepaf | Google Encoded Polyline Algorithm Format |
| gerbil | Generalized Efficient Regression-Based Imputation with Latent Processes |
| GerminaR | Indices and Graphics for Assess Seed Germination Process |
| germinationmetrics | Seed Germination Indices and Curve Fitting |
| gert | Simple Git Client for R |
| GESE | Gene-Based Segregation Test |
| gesisdata | Reproducible Data Retrieval from the GESIS Data Archive |
| gesso | Hierarchical GxE Interactions in a Regularized Regression Model |
| gestalt | Tools for Making and Combining Functions |
| gestate | Generalised Survival Trial Assessment Tool Environment |
| gesttools | General Purpose G-Estimation for End of Study or Time-Varying Outcomes |
| GET | Global Envelopes |
| getable | Fetching Tabular Data "Onload" in Compiled R Markdown HTML Documents |
| GetBCBData | Imports Datasets from BCB (Central Bank of Brazil) using Its Official API |
| GetDFPData | Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System |
| GetDFPData2 | Reading Annual and Quarterly Financial Reports from B3 |
| getDTeval | Translating Coding Statements using get() and eval() for Improved Run-Time Coding Efficiency |
| GetFREData | Reading FRE Corporate Data of Public Traded Companies from B3 |
| gethr | Access to Ethereum-Based Blockchains Through Geth Nodes |
| getip | 'IP' Address 'Lookup' |
| getlandsat | Get Landsat 8 Data from Amazon Public Data Sets |
| getLattes | Import and Process Data from the 'Lattes' Curriculum Platform |
| GetLattesData | Reading Bibliometric Data from Lattes Platform |
| getmstatistic | Quantifying Systematic Heterogeneity in Meta-Analysis |
| getopt | C-Like 'getopt' Behavior |
| GetoptLong | Parsing Command-Line Arguments and Simple Variable Interpolation |
| getPass | Masked User Input |
| getProxy | Get Free Proxy IP and Port |
| GetQuandlData | Fast and Cached Import of Data from 'Quandl' Using the 'json API' |
| gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |
| getspres | SPRE Statistics for Exploring Heterogeneity in Meta-Analysis |
| GetTDData | Get Data for Brazilian Bonds (Tesouro Direto) |
| gettz | Get the Timezone Information |
| getwiki | R Wrapper for Wikipedia Data |
| GEVACO | Joint Test of Gene and GxE Interactions via Varying Coefficients |
| GEVcdn | GEV Conditional Density Estimation Network |
| gexp | Generator of Experiments |
| geysertimes | Geyser Data from GeyserTimes.org |
| GFA | Group Factor Analysis |
| gfboost | Gradient-Free Gradient Boosting |
| gfcanalysis | Tools for Working with Hansen et al. Global Forest Change Dataset |
| GFD | Tests for General Factorial Designs |
| GFDsurv | Tests for Survival Data in General Factorial Designs |
| GFE | Gross Flows Estimation under Complex Surveys |
| gfer | Green Finance and Environmental Risk |
| GFGM.copula | Generalized Farlie-Gumbel-Morgenstern Copula |
| gfiExtremes | Generalized Fiducial Inference for Extremes |
| gfilmm | Generalized Fiducial Inference for Normal Linear Mixed Models |
| gfilogisreg | Generalized Fiducial Inference for Binary Logistic Regression Models |
| GFisher | Generalized Fisher's Combination Tests Under Dependence |
| gfiUltra | Generalized Fiducial Inference for Ultrahigh-Dimensional Regression |
| GFM | Generalized Factor Model |
| gfonts | Offline 'Google' Fonts for 'Markdown' and 'Shiny' |
| gfoRmula | Parametric G-Formula |
| gfpop | Graph-Constrained Functional Pruning Optimal Partitioning |
| gg.gap | Define Segments in y-Axis for 'ggplot2' |
| ggallin | Grab Bag of 'ggplot2' Functions |
| ggalluvial | Alluvial Plots in 'ggplot2' |
| GGally | Extension to 'ggplot2' |
| ggalt | Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' |
| ggamma | Generalized Gamma Probability Distribution |
| gganimate | A Grammar of Animated Graphics |
| ggarchery | Flexible Segment Geoms with Arrows for 'ggplot2' |
| ggasym | Asymmetric Matrix Plotting in 'ggplot2' |
| ggbeeswarm | Categorical Scatter (Violin Point) Plots |
| ggblanket | Wrappers to Simplify 'ggplot2' Visualisation |
| ggborderline | Line Plots that Pop |
| ggbraid | Braid Ribbons in 'ggplot2' |
| ggbreak | Set Axis Break for 'ggplot2' |
| ggBubbles | Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2' |
| ggbuildr | Save Incremental Builds of Plots |
| ggbump | Bump Chart and Sigmoid Curves |
| ggchangepoint | Combines Changepoint Analysis with 'ggplot2' |
| ggcharts | Shorten the Distance from Data Visualization Idea to Actual Plot |
| ggChernoff | Chernoff Faces for 'ggplot2' |
| GGClassification | Gabriel Graph Based Large-Margin Classifiers |
| ggcleveland | Implementation of Plots from Cleveland's Visualizing Data Book |
| ggconf | Simpler Appearance Modification of 'ggplot2' |
| ggcorrplot | Visualization of a Correlation Matrix using 'ggplot2' |
| ggcorset | The Corset Plot |
| ggdag | Analyze and Create Elegant Directed Acyclic Graphs |
| ggdark | Dark Mode for 'ggplot2' Themes |
| ggDCA | Calculate and Plot Decision Curve |
| ggdemetra | 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra' |
| ggdendro | Create Dendrograms and Tree Diagrams Using 'ggplot2' |
| ggdensity | Interpretable Bivariate Density Visualization with 'ggplot2' |
| ggdist | Visualizations of Distributions and Uncertainty |
| ggdmc | Cognitive Models |
| ggDoubleHeat | A Heatmap-Like Visualization Tool |
| gge | Genotype Plus Genotype-by-Environment Biplots |
| ggeasy | Easy Access to 'ggplot2' Commands |
| GGEBiplots | GGE Biplots with 'ggplot2' |
| ggedit | Interactive 'ggplot2' Layer and Theme Aesthetic Editor |
| ggeffects | Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs |
| ggenealogy | Visualization Tools for Genealogical Data |
| ggESDA | Exploratory Symbolic Data Analysis with 'ggplot2' |
| ggetho | Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data |
| ggExtra | Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements |
| ggfacto | Graphs for Correspondence Analysis |
| ggfan | Summarise a Distribution Through Coloured Intervals |
| ggfittext | Fit Text Inside a Box in 'ggplot2' |
| ggfocus | Scales that Focus Specific Levels in your ggplot() |
| ggforce | Accelerating 'ggplot2' |
| ggformula | Formula Interface to the Grammar of Graphics |
| ggfortify | Data Visualization Tools for Statistical Analysis Results |
| ggfun | Miscellaneous Functions for 'ggplot2' |
| ggfx | Pixel Filters for 'ggplot2' and 'grid' |
| gggap | Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots |
| gggenes | Draw Gene Arrow Maps in 'ggplot2' |
| ggghost | Capture the Spirit of Your 'ggplot2' Calls |
| gggibbous | Moon Charts, a Pie Chart Alternative |
| gggrid | Draw with 'grid' in 'ggplot2' |
| ggh4x | Hacks for 'ggplot2' |
| gghalfnorm | Create a Half Normal Plot Using 'ggplot2' |
| gghalves | Compose Half-Half Plots Using Your Favourite Geoms |
| gghdr | Visualisation of Highest Density Regions in 'ggplot2' |
| ggheatmap | Plot Heatmap |
| gghighlight | Highlight Lines and Points in 'ggplot2' |
| gghilbertstrings | A Fast 'ggplot2'-Based Implementation of Hilbert Curves |
| ggHoriPlot | Horizon Plots for 'ggplot2' |
| ggimage | Use Image in 'ggplot2' |
| ggimg | Graphics Layers for Plotting Image Data with 'ggplot2' |
| gginference | Visualise the Results of Inferential Statistics using 'ggplot2' |
| gginnards | Explore the Innards of 'ggplot2' Objects |
| ggip | Data Visualization for IP Addresses and Networks |
| GGIR | Raw Accelerometer Data Analysis |
| ggiraph | Make 'ggplot2' Graphics Interactive |
| ggiraphExtra | Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' |
| ggisotonic | 'ggplot2' Friendly Isotonic or Monotonic Regression Curves |
| ggjoy | Joyplots in 'ggplot2' |
| gglasso | Group Lasso Penalized Learning Using a Unified BMD Algorithm |
| gglm | Grammar of Graphics for Linear Model Diagnostic Plots |
| gglorenz | Plotting Lorenz Curve with the Blessing of 'ggplot2' |
| ggm | Graphical Markov Models with Mixed Graphs |
| ggmap | Spatial Visualization with ggplot2 |
| ggmatplot | Plot Columns of Two Matrices Against Each Other Using 'ggplot2' |
| ggmcmc | Tools for Analyzing MCMC Simulations from Bayesian Inference |
| ggmice | Visualizations for 'mice' with 'ggplot2' |
| ggmix | Variable Selection in Linear Mixed Models for SNP Data |
| GGMncv | Gaussian Graphical Models with Nonconvex Regularization |
| GGMnonreg | Non-Regularized Gaussian Graphical Models |
| ggmosaic | Mosaic Plots in the 'ggplot2' Framework |
| ggmotif | Extract and Visualize Motif Information from MEME Software |
| ggmr | Generalized Gauss Markov Regression |
| GGMridge | Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation |
| GGMselect | Gaussian Graphs Models Selection |
| ggmuller | Create Muller Plots of Evolutionary Dynamics |
| ggmulti | High Dimensional Data Visualization |
| ggnetwork | Geometries to Plot Networks with 'ggplot2' |
| ggnewscale | Multiple Fill and Colour Scales in 'ggplot2' |
| ggnormalviolin | A 'ggplot2' Extension to Make Normal Violin Plots |
| ggnuplot | Make 'ggplot2' Look Like 'gnuplot' |
| ggOceanMaps | Plot Data on Oceanographic Maps using 'ggplot2' |
| ggokabeito | 'Okabe-Ito' Scales for 'ggplot2' and 'ggraph' |
| ggpackets | Package Plot Layers for Easier Portability and Modularization |
| ggpacman | A 'ggplot2' and 'gganimate' Version of Pac-Man |
| ggpage | Creates Page Layout Visualizations |
| ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |
| ggparliament | Parliament Plots |
| ggparty | 'ggplot' Visualizations for the 'partykit' Package |
| ggpattern | 'ggplot2' Pattern Geoms |
| ggperiodic | Easy Plotting of Periodic Data with 'ggplot2' |
| ggpie | Pie, Donut and Rose Pie Plots |
| ggplot.multistats | Multiple Summary Statistics for Binned Stats/Geometries |
| ggplot2 | Create Elegant Data Visualisations Using the Grammar of Graphics |
| ggplot2movies | Movies Data |
| ggplotAssist | 'RStudio' Addin for Teaching and Learning 'ggplot2' |
| ggplotgui | Create Ggplots via a Graphical User Interface |
| ggplotify | Convert Plot to 'grob' or 'ggplot' Object |
| ggplotlyExtra | Extra Convenience Functions for 'Plotly' |
| ggpmisc | Miscellaneous Extensions to 'ggplot2' |
| ggPMX | 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models |
| ggpointdensity | A Cross Between a 2D Density Plot and a Scatter Plot |
| ggpointless | A Small Collection of New Geometries, and Stats for 'ggplot2' |
| ggpol | Visualizing Social Science Data with 'ggplot2' |
| ggpolar | Dots and Their Connections in Polar Coordinate System |
| ggpolypath | Polygons with Holes for the Grammar of Graphics |
| ggpp | Grammar Extensions to 'ggplot2' |
| ggprism | A 'ggplot2' Extension Inspired by 'GraphPad Prism' |
| ggpubr | 'ggplot2' Based Publication Ready Plots |
| ggpval | Annotate Statistical Tests for 'ggplot2' |
| ggQC | Quality Control Charts for 'ggplot' |
| ggQQunif | Compare Big Datasets to the Uniform Distribution |
| ggquickeda | Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables |
| ggquiver | Quiver Plots for 'ggplot2' |
| ggRandomForests | Visually Exploring Random Forests |
| ggraph | An Implementation of Grammar of Graphics for Graphs and Networks |
| ggraptR | Allows Interactive Visualization of Data Through a Web Browser GUI |
| ggrasp | Gaussian-Based Genome Representative Selector with Prioritization |
| ggrastr | Rasterize Layers for 'ggplot2' |
| ggrepel | Automatically Position Non-Overlapping Text Labels with 'ggplot2' |
| ggResidpanel | Panels and Interactive Versions of Diagnostic Plots using 'ggplot2' |
| GGRidge | Graphical Group Ridge |
| ggridges | Ridgeline Plots in 'ggplot2' |
| ggrisk | Risk Score Plot for Cox Regression |
| ggroups | Pedigree and Genetic Groups |
| ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' |
| ggseas | 'stats' for Seasonal Adjustment on the Fly with 'ggplot2' |
| ggseg | Plotting Tool for Brain Atlases |
| ggseg3d | Tri-Surface Mesh Plots for Brain Atlases |
| ggseqlogo | A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |
| ggseqplot | Render Sequence Plots using 'ggplot2' |
| ggshadow | Shadow and Glow Geoms for 'ggplot2' |
| ggside | Side Grammar Graphics |
| ggsignif | Significance Brackets for 'ggplot2' |
| ggsn | North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap' |
| ggsoccer | Plot Soccer Event Data |
| ggsolvencyii | A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM |
| ggsom | New Data Visualisations for SOMs Networks |
| ggspatial | Spatial Data Framework for ggplot2 |
| ggspectra | Extensions to 'ggplot2' for Radiation Spectra |
| ggstance | Horizontal 'ggplot2' Components |
| ggstar | Multiple Geometric Shape Point Layer for 'ggplot2' |
| ggstatsplot | 'ggplot2' Based Plots with Statistical Details |
| ggstream | Create Streamplots in 'ggplot2' |
| ggstudent | Continuous Confidence Interval Plots using t-Distribution |
| ggsurvey | Simplifying 'ggplot2' for Survey Data |
| ggswissmaps | Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects |
| ggtea | Palettes and Themes for 'ggplot2' |
| ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |
| ggtext | Improved Text Rendering Support for 'ggplot2' |
| ggThemeAssist | Add-in to Customize 'ggplot2' Themes |
| ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |
| ggtikz | Post-Process 'ggplot2' Plots with 'TikZ' Code Using Plot Coordinates |
| ggTimeSeries | Time Series Visualisations Using the Grammar of Graphics |
| ggtrace | Trace and Highlight Groups of Data Points |
| ggtrendline | Add Trendline and Confidence Interval to 'ggplot' |
| GGUM | Generalized Graded Unfolding Model |
| ggupset | Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots |
| ggvenn | Draw Venn Diagram by 'ggplot2' |
| ggVennDiagram | A 'ggplot2' Implement of Venn Diagram |
| ggversa | Graficas Versatiles Con 'ggplot2' |
| ggvis | Interactive Grammar of Graphics |
| ggwordcloud | A Word Cloud Geom for 'ggplot2' |
| ggx | A Natural Language Interface to 'ggplot2' |
| gh | 'GitHub' 'API' |
| GHap | Genome-Wide Haplotyping |
| Ghat | Quantifying Evolution and Selection on Complex Traits |
| ghclass | Tools for Managing Classes on GitHub |
| ghcm | Functional Conditional Independence Testing with the GHCM |
| ghee | Provides a Lightweight Interface for 'GitHub' through R |
| ghibli | Studio Ghibli Colour Palettes |
| Ghost | Missing Data Segments Imputation in Multivariate Streams |
| GhostKnockoff | The Knockoff Inference Using Summary Statistics |
| ghql | General Purpose 'GraphQL' Client |
| GHS | Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler |
| ghyp | Generalized Hyperbolic Distribution and Its Special Cases |
| ghypernet | Fit and Simulate Generalised Hypergeometric Ensembles of Graphs |
| gibble | Geometry Decomposition |
| GIC | A General Iterative Clustering Algorithm |
| giedata | API Wrapper for GIE's AGSI+/ALSI+ Natural Gas Storage Transparency Platform |
| gif | Graphical Independence Filtering |
| Gifi | Multivariate Analysis with Optimal Scaling |
| gifski | Highest Quality GIF Encoder |
| gifti | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information |
| GIFTr | GIFT Questions Format Generator from Dataframes |
| giftwrap | Take Shell Commands and Turn Them into R Functions |
| gigg | Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with Grouping Structure |
| GIGrvg | Random Variate Generator for the GIG Distribution |
| GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |
| GillespieSSA2 | Gillespie's Stochastic Simulation Algorithm for Impatient People |
| gim | Generalized Integration Model |
| gimme | Group Iterative Multiple Model Estimation |
| gimmeTools | Supplemental Tools for the 'gimme' R Package |
| gimms | Download and Process GIMMS NDVI3g Data |
| GiNA | High Throughput Phenotyping |
| Gini | Gini Coefficient |
| GiniDistance | A New Gini Correlation Between Quantitative and Qualitative Variables |
| GiniWegNeg | Computing the Gini-Based Coefficients for Weighted and Negative Attributes |
| GInSARCorW | GACOS InSAR Correction Workflow |
| gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |
| giphyr | R Interface to the Giphy API |
| GIplot | Gaussian Interval Plot (GIplot) |
| GiRaF | Gibbs Random Fields Analysis |
| giscoR | Download Map Data from GISCO API - Eurostat |
| gistr | Work with 'GitHub' 'Gists' |
| git2r | Provides Access to Git Repositories |
| git2rdata | Store and Retrieve Data.frames in a Git Repository |
| git4r | Interactive Git for R |
| gitcreds | Query 'git' Credentials from 'R' |
| gitdown | Turn Your Git Commit Messages into a HTML Book |
| gitear | Client to the 'gitea' API |
| gitgadget | 'Rstudio' Addin for Version Control and Assignment Management using Git |
| githubinstall | A Helpful Way to Install R Packages Hosted on GitHub |
| gitignore | Create Useful .gitignore Files for your Project |
| gitlabr | Access to the 'Gitlab' API |
| gitlink | Add 'Git' Links to Your Web Based Assets |
| gittargets | Data Version Control for the Targets Package |
| givitiR | The GiViTI Calibration Test and Belt |
| gjam | Generalized Joint Attribute Modeling |
| gJLS2 | A Generalized Joint Location and Scale Framework for Association Testing |
| GJRM | Generalised Joint Regression Modelling |
| gk | g-and-k and g-and-h Distribution Functions |
| GK2011 | Gaines and Kuklinski (2011) Estimators for Hybrid Experiments |
| gkgraphR | Accessing the Official 'Google Knowledge Graph' API |
| gkmSVM | Gapped-Kmer Support Vector Machine |
| glamlasso | Penalization in Large Scale Generalized Linear Array Models |
| glancedata | Generate tables and plots to get summaries of data |
| glarma | Generalized Linear Autoregressive Moving Average Models |
| GlarmaVarSel | Variable Selection in Sparse GLARMA Models |
| glassdoor | Interface to 'Glassdoor' API |
| glasso | Graphical Lasso: Estimation of Gaussian Graphical Models |
| glassoFast | Fast Graphical LASSO |
| glba | General Linear Ballistic Accumulator Models |
| glca | An R Package for Multiple-Group Latent Class Analysis |
| glcm | Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) |
| gld | Estimation and Use of the Generalised (Tukey) Lambda Distribution |
| GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions |
| GLDreg | Fit GLD Regression/Quantile/AFT Model to Data |
| gldrm | Generalized Linear Density Ratio Models |
| GLIDE | Global and Individual Tests for Direct Effects |
| glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |
| glinvci | Phylogenetic Comparative Methods with Uncertainty Estimates |
| gllm | Generalised log-Linear Model |
| gllvm | Generalized Linear Latent Variable Models |
| glm.deploy | 'C' and 'Java' Source Code Generator for Fitted Glm Objects |
| glm.predict | Predicted Values and Discrete Changes for GLM |
| glm2 | Fitting Generalized Linear Models |
| GLMaSPU | An Adaptive Test on High Dimensional Parameters in Generalized Linear Models |
| glmbb | All Hierarchical or Graphical Models for Generalized Linear Model |
| glmc | Fitting Generalized Linear Models Subject to Constraints |
| GLMcat | Generalized Linear Models for Categorical Responses |
| glmdisc | Discretization and Grouping for Logistic Regression |
| glme | Generalized Linear Mixed Effects Models |
| glmertree | Generalized Linear Mixed Model Trees |
| glmglrt | GLRT P-Values in Generalized Linear Models |
| glmlep | Fit GLM with LEP-Based Penalized Maximum Likelihood |
| glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |
| glmm.hp | Hierarchical Partitioning of Marginal R2 for Generalized Mixed-Effect Models |
| GLMMadaptive | Generalized Linear Mixed Models using Adaptive Gaussian Quadrature |
| glmmEP | Generalized Linear Mixed Model Analysis via Expectation Propagation |
| glmmfields | Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling |
| glmmLasso | Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation |
| glmmML | Generalized Linear Models with Clustering |
| glmmPen | High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) |
| GLMMRR | Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data |
| glmmSeq | General Linear Mixed Models for Gene-Level Differential Expression |
| glmmTMB | Generalized Linear Mixed Models using Template Model Builder |
| glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |
| glmnetcr | Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response |
| glmnetSE | Add Nonparametric Bootstrap SE to 'glmnet' for Selected Coefficients (No Shrinkage) |
| glmnetUtils | Utilities for 'Glmnet' |
| GLMpack | Data and Code to Accompany Generalized Linear Models, 2nd Edition |
| glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |
| glmpathcr | Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response |
| glmpca | Dimension Reduction of Non-Normally Distributed Data |
| GLMsData | Generalized Linear Model Data Sets |
| GlmSimulatoR | Creates Ideal Data for Generalized Linear Models |
| glmtlp | Generalized Linear Models with Truncated Lasso Penalty |
| glmtoolbox | Set of Tools to Data Analysis using Generalized Linear Models |
| glmtrans | Transfer Learning under Regularized Generalized Linear Models |
| glmtree | Logistic Regression Trees |
| glmulti | Model Selection and Multimodel Inference Made Easy |
| glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |
| glmx | Generalized Linear Models Extended |
| glmxdiag | A Collection of Graphic Tools for GLM Diagnostics and some Extensions |
| GlobalFit | Bi-Level Optimization of Metabolic Network Models |
| globalKinhom | Inhomogeneous K- And Pair Correlation Functions Using Global Estimators |
| GlobalOptions | Generate Functions to Get or Set Global Options |
| globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |
| globals | Identify Global Objects in R Expressions |
| globaltrends | Download and Measure Global Trends Through Google Search Volumes |
| globe | Plot 2D and 3D Views of the Earth, Including Major Coastline |
| glogis | Fitting and Testing Generalized Logistic Distributions |
| glossr | Use Interlinear Glosses in R Markdown |
| glottospace | Language Mapping and Geospatial Analysis of Linguistic and Cultural Data |
| glow | Make Plots that Glow |
| glpkAPI | R Interface to C API of GLPK |
| gLRTH | Genome-Wide Association and Linkage Analysis under Heterogeneity |
| GLSME | Generalized Least Squares with Measurement Error |
| glue | Interpreted String Literals |
| gluedown | Wrap Vectors in Markdown Formatting |
| gluvarpro | Glucose Variability Measures from Continuous Glucose Monitoring Data |
| glvmfit | Methods to Assess Generalized Latent Variable Model Fit |
| glycanr | Tools for Analysing N-Glycan Data |
| gm | Generate Music Easily and Show Them Anywhere |
| gma | Granger Mediation Analysis |
| GMAC | Genomic Mediation Analysis with Adaptive Confounding Adjustment |
| gmailr | Access the 'Gmail' 'RESTful' API |
| GmAMisc | 'Gianmarco Alberti' Miscellaneous |
| gmapsdistance | Distance and Travel Time Between Two Points from Google Maps |
| gmat | Simulation of Graphical Correlation Matrices |
| GMCM | Fast Estimation of Gaussian Mixture Copula Models |
| gMCP | Graph Based Multiple Comparison Procedures |
| gmDatabase | Accessing a Geometallurgical Database with R |
| GMDH | Short Term Forecasting via GMDH-Type Neural Network Algorithms |
| GMDH2 | Binary Classification via GMDH-Type Neural Network Algorithms |
| GMDHreg | Regression using GMDH Algorithms |
| Gmedian | Geometric Median, k-Medians Clustering and Robust Median PCA |
| gmeta | Meta-Analysis via a Unified Framework of Confidence Distribution |
| gmfd | Inference and Clustering of Functional Data |
| gmGeostats | Geostatistics for Compositional Analysis |
| gmgm | Gaussian Mixture Graphical Model Learning and Inference |
| Gmisc | Descriptive Statistics, Transition Plots, and More |
| GMKMcharlie | Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints |
| gmm | Generalized Method of Moments and Generalized Empirical Likelihood |
| GMMAT | Generalized Linear Mixed Model Association Tests |
| GMMBoost | Likelihood-Based Boosting for Generalized Mixed Models |
| gmnl | Multinomial Logit Models with Random Parameters |
| gmodels | Various R Programming Tools for Model Fitting |
| gMOIP | Tools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models |
| gmp | Multiple Precision Arithmetic |
| gmpoly | Multivariate Polynomials with Rational Coefficients |
| GMPro | Graph Matching with Degree Profiles |
| GmptzCurve | Gompertz Curve Fitting |
| gms | 'GAMS' Modularization Support Package |
| GMSE | Generalised Management Strategy Evaluation Simulator |
| GMSimpute | Generalized Mass Spectrum Missing Peaks Abundance Imputation |
| gmt | Interface Between GMT Map-Making Software and R |
| gmvarkit | Estimate Gaussian and Student's t Mixture Vector Autoregressive Models |
| gmwmx | Estimate Functional and Stochastic Parameters of Linear Models with Correlated Residuals |
| gMWT | Generalized Mann-Whitney Type Tests |
| GNAR | Methods for Fitting Network Time Series Models |
| GNE | Computation of Generalized Nash Equilibria |
| gnFit | Goodness of Fit Test for Continuous Distribution Functions |
| gnlm | Generalized Nonlinear Regression Models |
| gnm | Generalized Nonlinear Models |
| gnn | Generative Neural Networks |
| gnomonicM | Estimate Natural Mortality for Different Life Stages |
| gnorm | Generalized Normal/Exponential Power Distribution |
| gnrprod | Estimates Gross Output Functions |
| GNRS | Access the 'Geographic Name Resolution Service' |
| GNSSseg | Homogenization of GNSS Series |
| gnumeric | Read Data from Files Readable by 'gnumeric' |
| go2bigq | Convert Large Numbers to Bigq Format |
| GOCompare | Comprehensive GO Terms Comparison Between Species |
| goeveg | Functions for Community Data and Ordinations |
| gofar | Generalized Co-Sparse Factor Regression |
| gofastr | Fast DocumentTermMatrix and TermDocumentMatrix Creation |
| gofcat | Goodness-of-Fit Measures for Categorical Response Models |
| GofCens | Goodness-of-Fit Methods for Right-Censored Data |
| gofCopula | Goodness-of-Fit Tests for Copulae |
| goffda | Goodness-of-Fit Tests for Functional Data |
| gofgamma | Goodness-of-Fit Tests for the Gamma Distribution |
| GoFKernel | Testing Goodness-of-Fit with the Kernel Density Estimator |
| GofKmt | Khmaladze Martingale Transformation Goodness-of-Fit Test |
| GOFShiny | Interactive Document for Working with Goodness of Fit Analysis |
| goft | Tests of Fit for some Probability Distributions |
| goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |
| gogarch | Generalized Orthogonal GARCH (GO-GARCH) Models |
| goldilocks | Goldilocks Adaptive Trial Designs for Time-to-Event Endpoints |
| golem | A Framework for Robust Shiny Applications |
| gomms | GLM-Based Ordination Method |
| GomoGomonoMi | Animate Text using the 'Animate.css' Library |
| gontr | Dataset for 'GOxploreR' |
| good | Good Regression |
| GoodmanKruskal | Association Analysis for Categorical Variables |
| goodpractice | Advice on R Package Building |
| googleAnalyticsR | Google Analytics API into R |
| googleAuthR | Authenticate and Create Google APIs |
| googleCloudRunner | R Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler |
| googleCloudStorageR | Interface with Google Cloud Storage API |
| googleCloudVisionR | Access to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling |
| googleComputeEngineR | R Interface with Google Compute Engine |
| googledrive | An Interface to Google Drive |
| googleformr | Collect Data Programmatically by POST Methods to Google Forms |
| GoogleImage2Array | Create Array Data from 2D Image Thumbnails via Google Image Search |
| GoogleKnowledgeGraphR | Retrieve Information from 'Google Knowledge Graph' API |
| googleLanguageR | Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API |
| googlenlp | An Interface to Google's Cloud Natural Language API |
| googlePolylines | Encoding Coordinates into 'Google' Polylines |
| googlePrintr | Connect to 'Google Cloud Print' API |
| googlePublicData | Working with Google's 'Public Data Explorer' DSPL Metadata Files |
| googlePubsubR | R Interface for Google 'Cloud Pub/Sub' REST API |
| googler | Google from the R Console |
| googlesheets4 | Access Google Sheets using the Sheets API V4 |
| googleTagManageR | Access the 'Google Tag Manager' API using R |
| googleVis | R Interface to Google Charts |
| googleway | Accesses Google Maps APIs to Retrieve Data and Plot Maps |
| GOplot | Visualization of Functional Analysis Data |
| GORCure | Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data |
| goric | Generalized Order-Restricted Information Criterion |
| gorica | Evaluation of Inequality Constrained Hypotheses Using GORICA |
| gorpiper | GORpipe Tool for R |
| gosset | Tools for Data Analysis in Experimental Agriculture |
| gotop | Scroll Back to Top Icon in 'rmarkdown' and 'shiny' |
| govdown | GOV.UK Style Templates for R Markdown |
| govStatJPN | functions to get public survey data in Japan |
| gower | Gower's Distance |
| GOxploreR | Structural Exploration of the Gene Ontology (GO) Knowledge Base |
| goxygen | In-Code Documentation for 'GAMS' |
| gpairs | The Generalized Pairs Plot |
| GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |
| GPArotation | GPA Factor Rotation |
| GPBayes | Tools for Gaussian Process Modeling in Uncertainty Quantification |
| gpboost | Combining Tree-Boosting with Gaussian Process and Mixed Effects Models |
| gpbStat | Comprehensive Statistical Analysis of Plant Breeding Experiments |
| GPCERF | Gaussian Processes for Estimating Causal Exposure Response Curves |
| gpclib | General Polygon Clipping Library for R |
| GPCMlasso | Differential Item Functioning in Generalized Partial Credit Models |
| GPFDA | Gaussian Process for Functional Data Analysis |
| GPfit | Gaussian Processes Modeling |
| gpg | GNU Privacy Guard for R |
| GPGame | Solving Complex Game Problems using Gaussian Processes |
| GpGp | Fast Gaussian Process Computation Using Vecchia's Approximation |
| GPIC | Quantifying Group Performance in Individual Competitions |
| gpindex | Generalized Price and Quantity Indexes |
| gpk | 100 Data Sets for Statistics Education |
| GPL2025 | Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID |
| gplite | Implementation for the Most Common Gaussian Process Models |
| gplm | Generalized Partial Linear Models (GPLM) |
| gplots | Various R Programming Tools for Plotting Data |
| gplsim | Penalized Spline Estimation for GPLSIM |
| GPLTR | Generalized Partially Linear Tree-Based Regression Model |
| GPM | Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets |
| gpmap | Analysing and Plotting Genotype-Phenotype Maps |
| GPoM | Generalized Polynomial Modelling |
| GPoM.FDLyapu | Lyapunov Exponents and Kaplan-Yorke Dimension |
| GPP | Gaussian Process Projection |
| gppm | Gaussian Process Panel Modeling |
| GPRMortality | Gaussian Process Regression for Mortality Rates |
| gProfileR | Interface to the 'g:Profiler' Toolkit |
| gprofiler2 | Interface to the 'g:Profiler' Toolset |
| GPSCDF | Generalized Propensity Score Cumulative Distribution Function |
| GPSeqClus | Sequential Clustering Algorithm for Location Data |
| GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |
| GPvecchia | Scalable Gaussian-Process Approximations |
| gpx | Process GPX Files into R Data Structures |
| gqlr | 'GraphQL' Server in R |
| gquad | Prediction of G Quadruplexes and Other Non-B DNA Motifs |
| grabsampling | Probability of Detection for Grab Sample Selection |
| Grace | Graph-Constrained Estimation and Hypothesis Tests |
| grade | Binary Grading functions for R |
| gradeR | Helps Grade Assignment Submissions that are R Scripts |
| graDiEnt | Stochastic Quasi-Gradient Differential Evolution Optimization |
| gradientPickerD3 | Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker' |
| grafify | Easy Graphs for Data Visualisation and Linear Models for ANOVA |
| gRain | Graphical Independence Networks |
| grainchanger | Moving-Window and Direct Data Aggregation |
| grainscape | Landscape Connectivity, Habitat, and Protected Area Networks |
| gramEvol | Grammatical Evolution for R |
| GramQuad | Gram Quadrature |
| GRANBase | Creating Continuously Integrated Package Repositories from Manifests |
| GRANCore | Classes and Methods for 'GRANBase' |
| grangers | Inference on Granger-Causality in the Frequency Domain |
| granovaGG | Graphical Analysis of Variance Using ggplot2 |
| grantham | Calculate the 'Grantham' Distance |
| GRAPE | Gene-Ranking Analysis of Pathway Expression |
| grapes | Make Binary Operators |
| grapesAgri1 | Collection of Shiny Apps for Agricultural Research Data Analysis |
| graph3d | A Wrapper of the JavaScript Library 'vis-graph3d' |
| graph4lg | Build Graphs for Landscape Genetics Analysis |
| GrapheR | A Multi-Platform GUI for Drawing Customizable Graphs in R |
| grapherator | A Modular Multi-Step Graph Generator |
| graphframes | Interface for 'GraphFrames' |
| graphhopper | An R Interface to the 'GraphHopper' Directions API |
| graphicalExtremes | Statistical Methodology for Graphical Extreme Value Models |
| graphicalVAR | Graphical VAR for Experience Sampling Data |
| graphkernels | Graph Kernels |
| graphlayouts | Additional Layout Algorithms for Network Visualizations |
| graphon | A Collection of Graphon Estimation Methods |
| GraphPCA | Graphical Tools of Histogram PCA |
| graphql | A GraphQL Query Parser |
| graphsim | Simulate Expression Data from 'igraph' Networks |
| graphTweets | Visualise Twitter Interactions |
| graphx | Graphics Routines for Scientific Research |
| GrassmannOptim | Grassmann Manifold Optimization |
| grates | Grouped Date Classes |
| gratia | Graceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv' |
| graticule | Meridional and Parallel Lines for Maps |
| gratis | Generating Time Series with Diverse and Controllable Characteristics |
| grattan | Australian Tax Policy Analysis |
| gravitas | Explore Probability Distributions for Bivariate Temporal Granularities |
| gravity | Estimation Methods for Gravity Models |
| gRbase | A Package for Graphical Modelling in R |
| gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |
| GRCdata | Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data |
| greatR | Gene Registration from Expression and Time-Courses in R |
| grec | Gradient-Based Recognition of Spatial Patterns in Environmental Data |
| greed | Clustering and Model Selection with the Integrated Classification Likelihood |
| GreedyEPL | Greedy Expected Posterior Loss |
| GreedyExperimentalDesign | Greedy Experimental Design Construction |
| GreedyExperimentalDesignJARs | GreedyExperimentalDesign JARs |
| greekLetters | Routines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui' |
| greeks | Sensitivities of Prices of Financial Options and Implied Volatilites |
| greenclust | Combine Categories Using Greenacre's Method |
| GREENeR | Geospatial Regression Equation for European Nutrient Losses (GREEN) |
| Greg | Regression Helper Functions |
| gregRy | GREGORY Estimation |
| gremlin | Mixed-Effects REML Incorporating Generalized Inverses |
| GREMLINS | Generalized Multipartite Networks |
| gren | Adaptive Group-Regularized Logistic Elastic Net Regression |
| greport | Graphical Reporting for Clinical Trials |
| greta | Simple and Scalable Statistical Modelling in R |
| gretel | Generalized Path Analysis for Social Networks |
| gretlR | A Seamless Integration of 'Gretl' and 'R' |
| grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data |
| greybox | Toolbox for Model Building and Forecasting |
| GreyModel | Fitting and Forecasting of Grey Model |
| grf | Generalized Random Forests |
| gridBase | Integration of base and grid graphics |
| gridBezier | Bezier Curves in 'grid' |
| gridDebug | Debugging 'grid' Graphics |
| gridExtra | Miscellaneous Functions for "Grid" Graphics |
| gridGeometry | Polygon Geometry in 'grid' |
| gridGraphics | Redraw Base Graphics Using 'grid' Graphics |
| gridGraphviz | Drawing Graphs with 'grid' |
| GridOnClusters | Cluster-Preserving Multivariate Joint Grid Discretization |
| gridpattern | 'grid' Pattern Grobs |
| gridsampler | A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies |
| gridSVG | Export 'grid' Graphics as SVG |
| gridtext | Improved Text Rendering Support for 'Grid' Graphics |
| gRim | Graphical Interaction Models |
| grImport | Importing Vector Graphics |
| grImport2 | Importing 'SVG' Graphics |
| GrimR | Calculate Optical Parameters from Spindle Stage Measurements |
| gripp | General Inverse Problem Platform |
| grizbayr | Bayesian Inference for A|B and Bandit Marketing Tests |
| grmsem | Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM) |
| grnn | General regression neural network |
| GRNNs | General Regression Neural Networks Package |
| GROAN | Genomic Regression Workbench |
| grobblR | Creating Flexible, Reproducible 'PDF' Reports |
| groc | Generalized Regression on Orthogonal Components |
| gromovlab | Gromov-Hausdorff Type Distances for Labeled Metric Spaces |
| groundhog | Version-Control for CRAN, GitHub, and GitLab Packages |
| GroupBN | Inferring Group Bayesian Networks using Hierarchical Feature Clustering |
| GroupComparisons | Paired/Unpaired Parametric/Non-Parametric Group Comparisons |
| groupdata2 | Creating Groups from Data |
| groupedSurv | Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function |
| groupICA | Independent Component Analysis for Grouped Data |
| groupr | Groups with Inapplicable Values |
| groupRemMap | Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty |
| GroupSeq | Group Sequential Design Probabilities - With Graphical User Interface |
| groupsubsetselection | Group Subset Selection |
| GroupTest | Multiple Testing Procedure for Grouped Hypotheses |
| groupTesting | Simulating and Modeling Group (Pooled) Testing Data |
| groupwalk | Implement the Group Walk Algorithm |
| groupWQS | Grouped Weighted Quantile Sum Regression |
| grove | Wavelet Functional ANOVA Through Markov Groves |
| growfunctions | Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data |
| growth | Multivariate Normal and Elliptically-Contoured Repeated Measurements Models |
| growthcurver | Simple Metrics to Summarize Growth Curves |
| growthmodels | Nonlinear Growth Models |
| growthPheno | Plotting, Smoothing and Growth Trait Extraction for Longitudinal Data |
| growthrate | Bayesian reconstruction of growth velocity |
| growthrates | Estimate Growth Rates from Experimental Data |
| grpCox | Penalized Cox Model for High-Dimensional Data with Grouped Predictors |
| grPipe | Graphviz Pipeline Plot Based on Grids (grPipe: Graphviz Pipeline) |
| grplasso | Fitting User-Specified Models with Group Lasso Penalty |
| grplassocat | Standardization for Group Lasso Models with Categorical Predictors |
| grpreg | Regularization Paths for Regression Models with Grouped Covariates |
| grpsel | Group Subset Selection |
| grpseq | Group Sequential Analysis of Clinical Trials |
| grpSLOPE | Group Sorted L1 Penalized Estimation |
| GrpString | Patterns and Statistical Differences Between Two Groups of Strings |
| grr | Alternative Implementations of Base R Functions |
| GRS.test | GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation |
| grt | General Recognition Theory |
| GRTo | Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes |
| grwat | River Hydrograph Separation and Analysis |
| GSA | Gene Set Analysis |
| GSA.UN | Global Sensitivity Analysis Tool |
| GSAfisherCombined | Gene Set Analysis with Fisher Combined Method |
| GSAQ | Gene Set Analysis with QTL |
| gsarima | Two Functions for Generalized SARIMA Time Series Simulation |
| gsbDesign | Group Sequential Bayes Design |
| gscaLCA | Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression |
| gscounts | Group Sequential Designs with Negative Binomial Outcomes |
| GSDA | Gene Set Distance Analysis (GSDA) |
| gsDesign | Group Sequential Design |
| GSE | Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data |
| gsEasy | Gene Set Enrichment Analysis in R |
| GSED | Group Sequential Enrichment Design |
| gSeg | Graph-Based Change-Point Detection (g-Segmentation) |
| GSelection | Genomic Selection |
| gSEM | Semi-Supervised Generalized Structural Equation Modeling |
| gsheet | Download Google Sheets Using Just the URL |
| gsignal | Signal Processing |
| gsisdecoder | High Efficient Functions to Decode NFL Player IDs |
| gsl | Wrapper for the Gnu Scientific Library |
| gslnls | GSL Nonlinear Least-Squares Fitting |
| gsloid | Global Sea Level and Oxygen Isotope Data |
| GSM | Gamma Shape Mixture |
| gsmoothr | Smoothing tools |
| GSMX | Multivariate Genomic Selection |
| GSODR | Global Surface Summary of the Day ('GSOD') Weather Data Client |
| gson | Base Class and Methods for 'gson' Format |
| GSparO | Group Sparse Optimization |
| gsrs | A Group-Specific Recommendation System |
| gss | General Smoothing Splines |
| GSSE | Genotype-Specific Survival Estimation |
| gstar | Generalized Space-Time Autoregressive Model |
| gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |
| gStream | Graph-Based Sequential Change-Point Detection for Streaming Data |
| gstsm | Generalized Spatial-Time Sequence Miner |
| gsubfn | Utilities for Strings and Function Arguments |
| gsw | Gibbs Sea Water Functions |
| GsymPoint | Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests |
| gsynth | Generalized Synthetic Control Method |
| gt | Easily Create Presentation-Ready Display Tables |
| gt4ireval | Generalizability Theory for Information Retrieval Evaluation |
| gtable | Arrange 'Grobs' in Tables |
| GTDL | The Generalized Time-Dependent Logistic Family |
| gte | Generalized Turnbull's Estimator |
| gTests | Graph-Based Two-Sample Tests |
| gTestsMulti | New Graph-Based Multi-Sample Tests |
| gtExtras | Extending 'gt' for Beautiful HTML Tables |
| gtfs2gps | Converting Transport Data from GTFS Format to GPS-Like Records |
| gtfsio | Read and Write General Transit Feed Specification (GTFS) Files |
| gtfsrouter | Routing with GTFS (General Transit Feed Specification) Data |
| gtfstools | General Transit Feed Specification (GTFS) Editing and Analysing Tools |
| gtheory | Apply Generalizability Theory with R |
| gtools | Various R Programming Tools |
| gtop | Game-Theoretically OPtimal (GTOP) Reconciliation Method |
| gtreg | Regulatory Tables for Clinical Research |
| gtrendsR | Perform and Display Google Trends Queries |
| gtsummary | Presentation-Ready Data Summary and Analytic Result Tables |
| gtWAS | Genome and Transcriptome Wide Association Study |
| guaguas | Nombres Inscritos en Chile (1920 - 2021) |
| guardianapi | Access 'The Guardian' Newspaper Open Data API |
| Guerry | Maps, Data and Methods Related to Guerry (1833) "Moral Statistics of France" |
| guess | Adjust Estimates of Learning for Guessing |
| GUIDE | GUI for DErivatives in R |
| GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |
| guiplot | User-Friendly GUI Plotting Tools |
| GUIProfiler | Graphical User Interface for Rprof() |
| guix.install | Install R Packages with GNU Guix |
| gumbel | The Gumbel-Hougaard Copula |
| gumboot | Bootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit Statistics |
| GUniFrac | Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis |
| gunit | Converts Conductance Units |
| gunsales | Statistical Analysis of Monthly Background Checks of Gun Purchases |
| gustave | A User-Oriented Statistical Toolkit for Analytical Variance Estimation |
| gutenbergr | Download and Process Public Domain Works from Project Gutenberg |
| GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |
| GVARX | Perform Global Vector Autoregression Estimation and Inference |
| gvc | Global Value Chains Tools |
| gvcR | Genotypic Variance Components |
| gvlma | Global Validation of Linear Models Assumptions |
| gwaRs | Manhattan, Q-Q, and PCA Plots using 'ggplot2' |
| GWASbyCluster | Identifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering |
| GWASExactHW | Exact Hardy-Weinburg testing for Genome Wide Association Studies |
| gwasforest | Make Forest Plot with GWAS Data |
| GWASinlps | Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies |
| GWASinspector | Comprehensive and Easy to Use Quality Control of GWAS Results |
| gwasrapidd | 'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog |
| gwavr | Get Water Attributes Visually in R |
| gwer | Geographically Weighted Elliptical Regression |
| GWEX | Multi-Site Stochastic Models for Daily Precipitation and Temperature |
| gwfa | Geographically Weighted Fractal Analysis |
| GWI | Count and Continuous Generalized Variability Indexes |
| gWidgets2 | Rewrite of gWidgets API for Simplified GUI Construction |
| gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |
| GWLelast | Geographically Weighted Logistic Elastic Net Regression |
| GWmodel | Geographically-Weighted Models |
| GWnnegPCA | Geographically Weighted Non-Negative Principal Components Analysis |
| GWpcor | Geographically Weighted Partial Correlation Coefficient |
| gwpcormapper | Geographically Weighted Partial Correlation Mapper |
| GWPR.light | Geographically Weighted Panel Regression |
| gWQS | Generalized Weighted Quantile Sum Regression |
| GWRM | Generalized Waring Regression Model for Count Data |
| gwrpvr | Genome-Wide Regression P-Value (Gwrpv) |
| gwrr | Fits Geographically Weighted Regression Models with Diagnostic Tools |
| GWSDAT | GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) |
| GWsignif | Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests |
| GxEScanR | Run GWAS/GWEIS Scans Using Binary Dosage Files |
| gym | Provides Access to the OpenAI Gym API |
| gyro | Hyperbolic Geometry |
| h0 | A Meta Analysis for Estimating the Hubble Constant via Time Delay Cosmography |
| h2o | R Interface for the 'H2O' Scalable Machine Learning Platform |
| h2o4gpu | Interface to 'H2O4GPU' |
| H2x2Factorial | Sample Size Calculation in Hierarchical 2x2 Factorial Trials |
| h3jsr | Access Uber's H3 Library |
| haarfisz | Software to Perform Haar Fisz Transforms |
| habCluster | Detecting Spatial Clustering Based on Connection Cost Between Grids |
| hablar | Non-Astonishing Results in R |
| HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |
| hackeRnews | Wrapper for the 'Official Hacker News' API |
| hacksaw | Additional Tools for Splitting and Cleaning Data |
| hacksig | A Tidy Framework to Hack Gene Expression Signatures |
| HACSim | Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment |
| HadamardR | Hadamard Matrix Generation |
| HaDeX | Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data |
| hadron | Analysis Framework for Monte Carlo Simulation Data in Physics |
| hagis | Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity |
| hakaiApi | Authenticated HTTP Request Client for the 'Hakai' API |
| hal9001 | The Scalable Highly Adaptive Lasso |
| haldensify | Highly Adaptive Lasso Conditional Density Estimation |
| halfcircle | Plot Halfcircle Diagram |
| hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |
| handlr | Convert Among Citation Formats |
| HandTill2001 | Multiple Class Area under ROC Curve |
| handwriter | Handwriting Analysis in R |
| handyplots | Handy Plots |
| hans | Haversines are not Slow |
| hansard | Provides Easy Downloading Capabilities for the UK Parliament API |
| hapassoc | Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |
| Hapi | Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells |
| Haplin | Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |
| haplo.ccs | Estimate Haplotype Relative Risks in Case-Control Data |
| haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |
| haploR | Query 'HaploReg', 'RegulomeDB' |
| HaploSim | Functions to Simulate Haplotypes |
| haplotyper | Tool for Clustering Genotypes in Haplotypes |
| haplotypes | Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony |
| happign | R Interface to 'IGN' Web Services |
| happytime | Two Games to Relieve the Boredom |
| hapsim | Haplotype Data Simulation |
| hardhat | Construct Modeling Packages |
| HardyWeinberg | Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |
| HARModel | Heterogeneous Autoregressive Models |
| harmonicmeanp | Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood |
| harmonizer | Harmonizing CN8 and PC8 Product Codes |
| harmony | Fast, Sensitive, and Accurate Integration of Single Cell Data |
| harrietr | Wrangle Phylogenetic Distance Matrices and Other Utilities |
| harrypotter | Palettes Generated from All "Harry Potter" Movies |
| Harvest.Tree | Harvest the Classification Tree |
| hash | Full Featured Implementation of Hash Tables/Associative Arrays/Dictionaries |
| hashids | Generate Short Unique YouTube-Like IDs (Hashes) from Integers |
| hashr | Hash R Objects to Integers Fast |
| hasseDiagram | Drawing Hasse Diagram |
| haven | Import and Export 'SPSS', 'Stata' and 'SAS' Files |
| hawkes | Hawkes process simulation and calibration toolkit |
| hawkesbow | Estimation of Hawkes Processes from Binned Observations |
| HazardDiff | Conditional Treatment Effect for Competing Risks |
| hazer | Identifying Foggy and Cloudy Images by Quantifying Haziness |
| hBayesDM | Hierarchical Bayesian Modeling of Decision-Making Tasks |
| hbbr | Hierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment |
| HBglm | Hierarchical Bayesian Regression for GLMs |
| hbim | Hill/Bliss Independence Model for Combination Vaccines |
| hbmem | Hierarchical Bayesian Analysis of Recognition Memory |
| hbsae | Hierarchical Bayesian Small Area Estimation |
| HBSTM | Hierarchical Bayesian Space-Time Models for Gaussian Space-Time Data |
| HBV.IANIGLA | Modular Hydrological Model |
| hcandersenr | H.C. Andersens Fairy Tales |
| hcci | Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |
| hchinamap | Mapping China and Its Provinces |
| HCmodelSets | Regression with a Large Number of Potential Explanatory Variables |
| HCR | Causal Discovery from Discrete Data using Hidden Compact Representation |
| HCT | Calculates Significance Criteria and Power for a Single Arm Trial |
| HCTDesign | Group Sequential Design for Historical Control Trial with Survival Outcome |
| HCTR | Higher Criticism Tuned Regression |
| hctrial | Using Historical Controls for Designing Phase II Clinical Trials |
| HCV | Hierarchical Clustering from Vertex-Links |
| hda | Heteroscedastic Discriminant Analysis |
| hdbinseg | Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation |
| hdbm | High Dimensional Bayesian Mediation Analysis |
| HDBRR | High Dimensional Bayesian Ridge Regression without MCMC |
| HDCI | High Dimensional Confidence Interval Based on Lasso and Bootstrap |
| HDclassif | High Dimensional Supervised Classification and Clustering |
| HDclust | Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks |
| HDcpDetect | Detect Change Points in Means of High Dimensional Data |
| HDCurves | Hierarchical Derivative Curve Estimation |
| hdd | Easy Manipulation of Out of Memory Data Sets |
| HDDesign | Sample Size Calculation for High Dimensional Classification Study |
| hddplot | Use Known Groups in High-Dimensional Data to Derive Scores for Plots |
| hdf5r | Interface to the 'HDF5' Binary Data Format |
| hdfqlr | Interface to 'HDFql' API |
| HDGLM | Tests for High Dimensional Generalized Linear Models |
| hdi | High-Dimensional Inference |
| hdImpute | A Batch Process for High Dimensional Imputation |
| HDInterval | Highest (Posterior) Density Intervals |
| HDiR | Directional Highest Density Regions |
| hdiVAR | Statistical Inference for Noisy Vector Autoregression |
| HDLSSkST | Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests |
| hdm | High-Dimensional Metrics |
| hdme | High-Dimensional Regression with Measurement Error |
| HDMT | A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses |
| hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models |
| HDOMDesign | High-Dimensional Orthogonal Maximin Distance Designs |
| HDoutliers | Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |
| hdpca | Principal Component Analysis in High-Dimensional Data |
| HDPenReg | High-Dimensional Penalized Regression |
| hdpGLM | Hierarchical Dirichlet Process Generalized Linear Models |
| hdrcde | Highest Density Regions and Conditional Density Estimation |
| hds | Hazard Discrimination Summary |
| HDShOP | High-Dimensional Shrinkage Optimal Portfolios |
| HDSpatialScan | Multivariate and Functional Spatial Scan Statistics |
| HDStIM | High Dimensional Stimulation Immune Mapping ('HDStIM') |
| HDtest | High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series |
| hdtg | Generate Samples from Multivariate Truncated Normal Distributions |
| HDTSA | High Dimensional Time Series Analysis Tools |
| HDtweedie | The Lasso for Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |
| headliner | Compose Sentences to Describe Comparisons |
| healthfinance | Financial Projections and Planning for Health Care Practices |
| healthyR | Hospital Data Analysis Workflow Tools |
| healthyR.ai | The Machine Learning and AI Modeling Companion to 'healthyR' |
| healthyR.data | Data Only Package to 'healthyR' |
| healthyR.ts | The Time Series Modeling Companion to 'healthyR' |
| healthyverse | Easily Install and Load the 'healthyverse' |
| heapsofpapers | Easily Download Heaps of PDF and CSV Files |
| heatex | Heat exchange calculations during physical activity |
| heatmap3 | An Improved Heatmap Package |
| heatmapFit | Fit Statistic for Binary Dependent Variable Models |
| heatmapFlex | Tools to Generate Flexible Heatmaps |
| heatmaply | Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' |
| heatwaveR | Detect Heatwaves and Cold-Spells |
| HEDA | 'Hydropeaking Events Detection Algorithm' |
| heddlr | Dynamic R Markdown Document Generation |
| hedgehog | Property-Based Testing |
| heemod | Markov Models for Health Economic Evaluations |
| heims | Decode and Validate HEIMS Data from Department of Education, Australia |
| helda | Preprocess Data and Get Better Insights from Machine Learning Models |
| helixvis | Visualize Alpha-Helical Peptide Sequences |
| HellCor | The Hellinger Correlation |
| hellno | Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |
| helloJavaWorld | Hello Java World |
| helminthR | Access London Natural History Museum Host-Helminth Record Database |
| HelpersMG | Tools for Environmental Analyses, Ecotoxicology and Various R Functions |
| helsinki | R Tools for Helsinki Open Data |
| HEMDAG | Hierarchical Ensemble Methods for Directed Acyclic Graphs |
| heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |
| here | A Simpler Way to Find Your Files |
| hereR | 'sf'-Based Interface to the 'HERE' REST APIs |
| hergm | Hierarchical Exponential-Family Random Graph Models |
| heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |
| heritEWAS | Identify Heritable Methylation Marks |
| HeritSeq | Heritability of Gene Expression for Next-Generation Sequencing |
| hermite | Generalized Hermite Distribution |
| hermiter | Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Spearman's Correlation (Bivariate) |
| hero | Spatio-Temporal (Hero) Sandwich Smoother |
| hesim | Health Economic Simulation Modeling and Decision Analysis |
| HeterFunctionalData | Test of No Main and/or Interaction Effects in Functional Data |
| HeteroGGM | Gaussian Graphical Model-Based Heterogeneity Analysis |
| hetGP | Heteroskedastic Gaussian Process Modeling and Design under Replication |
| HETOP | MLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model |
| hetsurr | Assessing Heterogeneity in the Utility of a Surrogate Marker |
| hett | Heteroscedastic t-Regression |
| hettreatreg | Heterogeneous Treatment Effects in Regression Analysis |
| hettx | Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation |
| hetu | Structural Handling of Finnish Personal Identity Codes |
| heuristica | Heuristics Including Take the Best and Unit-Weight Linear |
| heuristicsmineR | Discovery of Process Models with the Heuristics Miner |
| hexbin | Hexagonal Binning Routines |
| hexSticker | Create Hexagon Sticker in R |
| HextractoR | Integrated Tool for Hairping Extraction of RNA Sequences |
| hextri | Hexbin Plots with Triangles |
| hexView | Viewing Binary Files |
| hflights | Flights that departed Houston in 2011 |
| hfr | Estimate Hierarchical Feature Regression Models |
| hglasso | Learning Graphical Models with Hubs |
| hglm | Hierarchical Generalized Linear Models |
| hglm.data | Data for the 'hglm' Package |
| hgm | Holonomic Gradient Method and Gradient Descent |
| HGMND | Heterogeneous Graphical Model for Non-Negative Data |
| hgnc | Download and Import the HUGO Gene Nomenclature Committee ('HGNC') Data Set into R |
| HGNChelper | Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols |
| HGSL | Heterogeneous Group Square-Root Lasso |
| hgutils | Collection of Utility Functions |
| hgwrr | Hierarchical and Geographically Weighted Regression |
| HH | Statistical Analysis and Data Display: Heiberger and Holland |
| HHG | Heller-Heller-Gorfine Tests of Independence and Equality of Distributions |
| hhh4contacts | Age-Structured Spatio-Temporal Models for Infectious Disease Counts |
| hhi | Calculate and Visualize the Herfindahl-Hirschman Index |
| hhsmm | Hidden Hybrid Markov/Semi-Markov Model Fitting |
| hht | The Hilbert-Huang Transform: Tools and Methods |
| HI | Simulation from Distributions Supported by Nested Hyperplanes |
| hibayes | Individual-Level, Summary-Level and Single-Step Bayesian Regression Model |
| HiCfeat | Multiple Logistic Regression for 3D Chromatin Domain Border Analysis |
| HiClimR | Hierarchical Climate Regionalization |
| HiCseg | Detection of domains in HiC data |
| hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |
| HiddenMarkov | Hidden Markov Models |
| HiDimDA | High Dimensional Discriminant Analysis |
| hier.part | Hierarchical Partitioning |
| hierarchicalDS | Functions to Perform Hierarchical Analysis of Distance Sampling Data |
| hierarchicalSets | Set Data Visualization Using Hierarchies |
| hierBipartite | Bipartite Graph-Based Hierarchical Clustering |
| HierDpart | Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems |
| hierfstat | Estimation and Tests of Hierarchical F-Statistics |
| hierNet | A Lasso for Hierarchical Interactions |
| HierPortfolios | Hierarchical Clustering-Based Portfolio Allocation Strategies |
| hierSDR | Hierarchical Sufficient Dimension Reduction |
| highcharter | A Wrapper for the 'Highcharts' Library |
| highDmean | Testing Two-Sample Mean in High Dimension |
| HighestMedianRules | Implementation of Voting Rules Electing the Candidate with Highest Median Grade |
| highfrequency | Tools for Highfrequency Data Analysis |
| highlight | Syntax Highlighter |
| highlightHTML | Highlight HTML Text and Tables |
| highmean | Two-Sample Tests for High-Dimensional Mean Vectors |
| highMLR | Feature Selection for High Dimensional Survival Data |
| highr | Syntax Highlighting for R Source Code |
| highriskzone | Determining and Evaluating High-Risk Zones |
| highSCREEN | High-Throughput Screening for Plate Based Essays |
| highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |
| higlasso | Hierarchical Integrative Group LASSO |
| higrad | Statistical Inference for Online Learning and Stochastic Approximation via HiGrad |
| hilbert | Coordinate Indexing on Hilbert Curves |
| hilbertSimilarity | Hilbert Similarity Index for High Dimensional Data |
| hildareadR | Extract Variables from HILDA |
| hilldiv | Integral Analysis of Diversity Based on Hill Numbers |
| hillR | Diversity Through Hill Numbers |
| hillshader | Create Hillshade Relief Maps Using Ray-Tracing |
| HIMA | High-Dimensional Mediation Analysis |
| himach | High Mach Finds Routes for Supersonic Aircraft |
| hindex | Simulating the Development of h-Index Values |
| hindexcalculator | H-Index Calculator using Data from a Web of Science (WoS) Citation Report |
| hint | Tools for Hypothesis Testing Based on Hypergeometric Intersection Distributions |
| hiphop | Parentage Assignment using Bi-Allelic Genetic Markers |
| hipread | Read Hierarchical Fixed Width Files |
| HiResTEC | Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data |
| hIRT | Hierarchical Item Response Theory Models |
| hisse | Hidden State Speciation and Extinction |
| HistDat | Summary Statistics for Histogram/Count Data |
| HistData | Data Sets from the History of Statistics and Data Visualization |
| HistDAWass | Histogram-Valued Data Analysis |
| histmdl | A Most Informative Histogram-Like Model |
| histogram | Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins |
| HistogramTools | Utility Functions for R Histograms |
| historydata | Data Sets for Historians |
| histry | Enhanced Command History Tracking for R Sessions and Dynamic Documents |
| hit | Hierarchical Inference Testing |
| hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |
| hive | Hadoop InteractiVE |
| HiveR | 2D and 3D Hive Plots for R |
| hJAM | Hierarchical Joint Analysis of Marginal Summary Statistics |
| HK80 | Conversion Tools for HK80 Geographical Coordinate System |
| hkclustering | Ensemble Clustering using K Means and Hierarchical Clustering |
| hkdatasets | Datasets Related to Hong Kong |
| hkevp | Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |
| hkex.api | API to Retrieve Data from Hong Kong Stock Exchange |
| HKprocess | Hurst-Kolmogorov Process |
| hlaR | Tools for HLA Data |
| hlidacr | Access Data from the 'Hlídač Státu' API |
| HLMdiag | Diagnostic Tools for Hierarchical (Multilevel) Linear Models |
| HLSM | Hierarchical Latent Space Network Model |
| HMB | Hierarchical Model-Based Estimation Approach |
| hmclearn | Fit Statistical Models Using Hamiltonian Monte Carlo |
| HMDHFDplus | Read Human Mortality Database and Human Fertility Database Data from the Web |
| hmeasure | The H-Measure and Other Scalar Classification Performance Metrics |
| hmer | History Matching and Emulation Package |
| Hmisc | Harrell Miscellaneous |
| hmlasso | Lasso with High Missing Rate |
| HMM | Hidden Markov Models |
| hmm.discnp | Hidden Markov Models with Discrete Non-Parametric Observation Distributions |
| HMMcopula | Markov Regime Switching Copula Models Estimation and Goodness of Fit |
| HMMEsolver | A Fast Solver for Henderson Mixed Model Equation via Row Operations |
| HMMextra0s | Hidden Markov Models with Extra Zeros |
| hmmm | Hierarchical Multinomial Marginal Models |
| HMMmlselect | Determine the Number of States in Hidden Markov Models via Marginal Likelihood |
| HMMpa | Analysing Accelerometer Data Using Hidden Markov Models |
| hmmr | "Mixture and Hidden Markov Models with R" Datasets and Example Code |
| HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |
| HMPTrees | Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |
| HMR | Flux Estimation with Static Chamber Data |
| hms | Pretty Time of Day |
| Hmsc | Hierarchical Model of Species Communities |
| hmstimer | 'hms' Based Timer |
| HMVD | Group Association Test using a Hidden Markov Model |
| hNMF | Hierarchical Non-Negative Matrix Factorization |
| hnp | Half-Normal Plots with Simulation Envelopes |
| hoa | Higher Order Likelihood Inference |
| hoardeR | Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices |
| hoardr | Manage Cached Files |
| hockeystick | Download and Visualize Essential Climate Change Data |
| holdem | Texas Holdem Simulator |
| holiglm | Holistic Generalized Linear Models |
| holland | Statistics for Holland's Theory of Vocational Choice |
| holodeck | A Tidy Interface for Simulating Multivariate Data |
| homals | Gifi Methods for Optimal Scaling |
| homeR | Useful Functions for Building Physics |
| Homeric | Doughnut Plots |
| hommel | Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method |
| homologene | Quick Access to Homologene and Gene Annotation Updates |
| homomorpheR | Homomorphic Computations in R |
| hoopR | Access Men's Basketball Play by Play Data |
| hopbyhop | Transmissions and Receptions in a Hop by Hop Network |
| hopit | Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity |
| hopkins | Calculate Hopkins Statistic for Clustering |
| HoRM | Supplemental Functions and Datasets for "Handbook of Regression Methods" |
| hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |
| horseshoe | Implementation of the Horseshoe Prior |
| horseshoenlm | Nonlinear Regression using Horseshoe Prior |
| hospitals | Portuguese 'NHS' Hospitals |
| HostSwitch | Simulate the Extent of Host Switching by Consumers |
| hot.deck | Multiple Hot Deck Imputation |
| Hotelling | Hotelling's T^2 Test and Variants |
| HotellingEllipse | Hotelling T-Square and Confidence Ellipse |
| hotspot | Software Hotspot Analysis |
| hotspots | Hot Spots |
| housingData | U.S. Housing Data from 2008 to 2016 |
| hover | CSS Animations for 'shiny' Button Elements |
| howler | 'Shiny' Extension of 'howler.js' |
| howmany | A lower bound for the number of correct rejections |
| howManyImputations | Calculate How many Imputations are Needed for Multiple Imputation |
| howzatR | Useful Functions for Cricket Analysis |
| hpa | Distributions Hermite Polynomial Approximation |
| hpackedbubble | Create Split Packed Bubble Charts |
| hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |
| hpiR | House Price Indexes |
| HPLB | High-Probability Lower Bounds for the Total Variance Distance |
| hpoPlot | Functions for Plotting HPO Terms |
| hqmisc | Miscellaneous Convenience Functions and Dataset |
| hqreg | Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |
| hR | Toolkit for Data Analytics in Human Resources |
| hrbrthemes | Additional Themes, Theme Components and Utilities for 'ggplot2' |
| hrcomprisk | Nonparametric Assessment Between Competing Risks Hazard Ratios |
| HRM | High-Dimensional Repeated Measures |
| hrqglas | Group Variable Selection for Quantile and Robust Mean Regression |
| hrt | Heteroskedasticity Robust Testing |
| HRW | Datasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018) |
| HS | Homogenous Segmentation for Spatial Lines Data |
| HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |
| HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |
| HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |
| hscovar | Calculation of Covariance Between Markers for Half-Sib Families |
| hsdar | Manage, Analyse and Simulate Hyperspectral Data |
| HSDiC | Homogeneity and Sparsity Detection Incorporating Prior Constraint Information |
| hSDM | Hierarchical Bayesian Species Distribution Models |
| hse | The hse Distribution |
| hsem | Hierarchical Structural Equation Model |
| HSEtest | Homogeneity of Stratum Effects Test |
| hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |
| HSPOR | Hidden Smooth Polynomial Regression for Rupture Detection |
| hsrecombi | Estimation of Recombination Rate and Maternal LD in Half-Sibs |
| hsstan | Hierarchical Shrinkage Stan Models for Biomarker Selection |
| htdp | Horizontal Time Dependent Positioning |
| htestClust | Reweighted Marginal Hypothesis Tests for Clustered Data |
| HTLR | Bayesian Logistic Regression with Heavy-Tailed Priors |
| htm2txt | Convert Html into Text |
| htmcglm | Hypothesis Testing for McGLMs |
| html2R | Convert 'HTML' to 'R' with a 'Shiny' App |
| html5 | Creates Valid HTML5 Strings |
| htmldf | Simple Scraping and Tidy Webpage Summaries |
| htmltab | Assemble Data Frames from HTML Tables |
| htmlTable | Advanced Tables for Markdown/HTML |
| htmltidy | Tidy Up and Test XPath Queries on HTML and XML Content |
| htmltools | Tools for HTML |
| HTMLUtils | Facilitates Automated HTML Report Creation |
| htmlwidgets | HTML Widgets for R |
| htree | Historical Tree Ensembles for Longitudinal Data |
| hts | Hierarchical and Grouped Time Series |
| HTSCluster | Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
| htsr | Hydro-Meteorology Time-Series |
| HTSSIP | High Throughput Sequencing of Stable Isotope Probing Data Analysis |
| httk | High-Throughput Toxicokinetics |
| httpcache | Query Cache for HTTP Clients |
| httpcode | 'HTTP' Status Code Helper |
| httpgd | A 'HTTP' Server Graphics Device |
| httping | 'Ping' 'URLs' to Time 'Requests' |
| httpproblems | Report Errors in Web Applications with 'Problem Details' (RFC 7807) |
| httpRequest | Basic HTTP Request |
| httptest | A Test Environment for HTTP Requests |
| httptest2 | Test Helpers for 'httr2' |
| httpuv | HTTP and WebSocket Server Library |
| httr | Tools for Working with URLs and HTTP |
| httr2 | Perform HTTP Requests and Process the Responses |
| hudr | Providing Data from the US Department of Housing and Urban Development |
| hues | Distinct Colour Palettes Based on 'iwanthue' |
| huge | High-Dimensional Undirected Graph Estimation |
| huito | Reproducible and Flexible Label Design |
| HUM | Compute HUM Value and Visualize ROC Curves |
| humanFormat | Human-Friendly Formatting Functions |
| humaniformat | A Parser for Human Names |
| humanize | Create Values for Human Consumption |
| humanleague | Synthetic Population Generator |
| humidity | Calculate Water Vapor Measures from Temperature and Dew Point |
| hunspell | High-Performance Stemmer, Tokenizer, and Spell Checker |
| HuraultMisc | Guillem Hurault Functions' Library |
| hurdlr | Zero-Inflated and Hurdle Modelling Using Bayesian Inference |
| HurreconR | Models Hurricane Wind Speed, Wind Direction, and Wind Damage |
| hurricaneexposure | Explore and Map County-Level Hurricane Exposure in the United States |
| hutils | Miscellaneous R Functions and Aliases |
| hutilscpp | Miscellaneous Functions in C++ |
| huxtable | Easily Create and Style Tables for LaTeX, HTML and Other Formats |
| hwde | Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |
| HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |
| hwep | Hardy-Weinberg Equilibrium in Polyploids |
| hwig | Half-Weight Index Gregariousness |
| hwordcloud | Rendering Word Clouds |
| hwriter | HTML Writer - Outputs R Objects in HTML Format |
| hwsdr | Interface to the 'HWSD' Web Services |
| hwwntest | Tests of White Noise using Wavelets |
| hybridEnsemble | Build, Deploy and Evaluate Hybrid Ensembles |
| hybridModels | An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks |
| hybridogram | Function that Creates a Heat Map from Hybridization Data |
| HydeNet | Hybrid Bayesian Networks Using R and JAGS |
| hydra | Hyperbolic Embedding |
| hydraulics | Basic Pipe and Open Channel Hydraulics |
| HydroCode | Hydrological Codes |
| hydroEvents | Extract Event Statistics in Hydrologic Time Series |
| hydrogeo | Groundwater Data Presentation and Interpretation |
| hydroGOF | Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series |
| HydroMe | Estimating Water Retention and Infiltration Model Parameters using Experimental Data |
| hydropeak | Detect and Characterize Sub-Daily Flow Fluctuations |
| hydroPSO | Particle Swarm Optimisation, with Focus on Environmental Models |
| hydrorecipes | Hydrogeology Steps for the 'recipes' Package |
| hydroroute | Trace Longitudinal Hydropeaking Waves |
| hydroscoper | Interface to the Greek National Data Bank for Hydrometeorological Information |
| hydrostats | Hydrologic Indices for Daily Time Series Data |
| hydrotoolbox | Hydrological Tools for Handling Hydro-Meteorological Data Records |
| hydroToolkit | Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile |
| hydroTSM | Time Series Management, Analysis and Interpolation for Hydrological Modelling |
| hyfo | Hydrology and Climate Forecasting |
| hyper.fit | Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter |
| hyper2 | The Hyperdirichlet Distribution, Mark 2 |
| HyperbolicDist | The Hyperbolic Distribution |
| hyperbrick | Accessory Tools for Preprocessing Hyper-Spectral Images |
| hypercube | Organizing Data in Hypercubes |
| HyperG | Hypergraphs in R |
| hypergate | Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry |
| hypergeo | The Gauss Hypergeometric Function |
| HypergeoMat | Hypergeometric Function of a Matrix Argument |
| hyperoverlap | Overlap Detection in n-Dimensional Space |
| hypersampleplan | Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials |
| hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |
| hypervolume | High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls |
| hypoRF | Random Forest Two-Sample Tests |
| hypothesisr | Wrapper for the 'Hypothes.is' Web Annotation Service |
| hypr | Hypothesis Matrix Translation |
| hypsoLoop | A Tool Used to Conduct Hypsometric Analysis of a Watershed |
| HyRiM | Multicriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions |
| hySpc.testthat | 'testthat' Unit Test Enhancements |
| hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |
| hystReet | Get Pedestrian Frequency Data from the 'Hystreet' Project |
| i18n | Internationalization Data from the 'Unicode CLDR' in Tabular Form |
| i2dash | Iterative and Interactive Dashboards |
| i2extras | Functions to Work with 'incidence2' Objects |
| IAcsSPCR | Data and Functions for "An Intro. to Accept. Samp. & SPC/R" |
| iAdapt | Two-Stage Adaptive Dose-Finding Clinical Trial Design |
| iadf | Analysis of Intra Annual Density Fluctuations |
| iai | Interface to 'Interpretable AI' Modules |
| ialiquor | Monthly Iowa Liquor Sales Summary |
| iapws | Formulations of International Association for the Properties of Water and Steam |
| IAPWS95 | Thermophysical Properties of Water and Steam |
| iAR | Irregularly Observed Autoregressive Models |
| iarm | Item Analysis in Rasch Models |
| IASD | Model Selection for Index of Asymmetry Distribution |
| IAT | Cleaning and Visualizing Implicit Association Test (IAT) Data |
| IATanalytics | Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data |
| IATScore | Scoring Algorithm for the Implicit Association Test (IAT) |
| IATscores | Implicit Association Test Scores Using Robust Statistics |
| ib | Bias Correction via Iterative Bootstrap |
| iBATCGH | Integrative Bayesian Analysis of Transcriptomic and CGH Data |
| ibawds | Functions and Datasets for the Data Science Course at IBAW |
| ibb | R Wrapper for Istanbul Municipality Open Data Portal |
| IBCF.MTME | Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data |
| ibd | Incomplete Block Designs |
| IBDLabels | Convert Between Different IBD-State Labelling Schemes |
| ibdreg | Regression Methods for IBD Linkage with Covariates |
| IBDsim | Simulation of Chromosomal Regions Shared by Family Members |
| ibdsim2 | Simulation of Chromosomal Regions Shared by Family Members |
| ibelief | Belief Function Implementation |
| ibm | Individual Based Models in R |
| ibmAcousticR | Connect to Your 'IBM Acoustic' Data |
| ibmcraftr | Toolkits to Develop Individual-Based Models in Infectious Disease |
| ibmdbR | IBM in-Database Analytics for R |
| IBMPopSim | Individual Based Model Population Simulation |
| ibr | Iterative Bias Reduction |
| iBreakDown | Model Agnostic Instance Level Variable Attributions |
| IBrokers | R API to Interactive Brokers Trader Workstation |
| ibs | Integral of B-Spline Functions |
| iBST | Improper Bagging Survival Tree |
| ic.infer | Inequality Constrained Inference in Linear Normal Situations |
| iC10 | A Copy Number and Expression-Based Classifier for Breast Tumours |
| iC10TrainingData | Training Datasets for iC10 Package |
| ica | Independent Component Analysis |
| ical | 'iCalendar' Parsing |
| iCAMP | Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis |
| ICAMS | In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS') |
| ICAOD | Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA) |
| icapca | Mixed ICA/PCA |
| icardaFIGSr | Subsetting using Focused Identification of the Germplasm Strategy (FIGS) |
| iCARH | Integrative Conditional Autoregressive Horseshoe Model |
| icarus | Calibrates and Reweights Units in Samples |
| ICBayes | Bayesian Semiparametric Models for Interval-Censored Data |
| ICBioMark | Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers |
| ICC | Facilitating Estimation of the Intraclass Correlation Coefficient |
| ICC.Sample.Size | Calculation of Sample Size and Power for ICC |
| ICcalib | Cox Model with Interval-Censored Starting Time of a Covariate |
| iccbeta | Multilevel Model Intraclass Correlation for Slope Heterogeneity |
| ICCbin | Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data |
| iccCounts | Intraclass Correlation Coefficient for Count Data |
| iccde | Computation of the Double-Entry Intraclass Correlation |
| ICcforest | An Ensemble Method for Interval-Censored Survival Data |
| icd.data | International Classifcation of Diseases (ICD) Data |
| ICD10gm | Metadata Processing for the German Modification of the ICD-10 Coding System |
| icdGLM | EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models |
| icdpicr | 'ICD' Programs for Injury Categorization in R |
| ICDS | Identification of Cancer Dysfunctional Subpathway with Omics Data |
| ICEbox | Individual Conditional Expectation Plot Toolbox |
| icecream | Print Debugging Made Sweeter |
| ICEinfer | Incremental Cost-Effectiveness Inference using Two Unbiased Samples |
| iCellR | Analyzing High-Throughput Single Cell Sequencing Data |
| icenReg | Regression Models for Interval Censored Data |
| icensBKL | Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre |
| icensmis | Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes |
| icertool | Calculate and Plot ICER |
| icesAdvice | Functions Related to ICES Advice |
| IceSat2R | ICESat-2 Altimeter Data using R |
| icesConnect | Provides User Tokens for Access to ICES Web Services |
| icesDatras | DATRAS Trawl Survey Database Web Services |
| icesDatsu | Functions to Interact with the ICES Data Submission Utility (DATSU) |
| icesDatsuQC | Run Quality Checks on Data Prior to Submission to ICES |
| icesSAG | Stock Assessment Graphs Database Web Services |
| icesSD | Stock Database Web Services |
| icesTAF | Functions to Support the ICES Transparent Assessment Framework |
| icesVocab | ICES Vocabularies Database Web Services |
| ICGE | Estimation of Number of Clusters and Identification of Atypical Units |
| ICglm | Information Criteria for Generalized Linear Regression |
| ICGOR | Fit Generalized Odds Rate Hazards Model with Interval Censored Data |
| ichimoku | Visualization and Tools for Ichimoku Kinko Hyo Strategies |
| iCiteR | A Minimal Wrapper Around NIH's 'iCite' API |
| iClick | A Button-Based GUI for Financial and Economic Data Analysis |
| icmm | Empirical Bayes Variable Selection via ICM/M Algorithm |
| ICODS | Data Analysis for ODS and Case-Cohort Designs with Interval-Censoring |
| iconr | Graphical and Spatial Analysis for Prehistoric Iconography |
| icosa | Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra |
| icpsrdata | Reproducible Data Retrieval from the ICPSR Archive |
| icr | Compute Krippendorff's Alpha |
| ICRanks | Simultaneous Confidence Intervals for Ranks |
| icrf | Interval Censored Recursive Forests |
| icRSF | A Modified Random Survival Forest Algorithm |
| ICS | Tools for Exploring Multivariate Data via ICS/ICA |
| ICSKAT | Interval-Censored Sequence Kernel Association Test |
| ICSNP | Tools for Multivariate Nonparametrics |
| ICSOutlier | Outlier Detection Using Invariant Coordinate Selection |
| ICSS | ICSS Algorithm by Inclan/Tiao (1994) |
| ICSShiny | ICS via a Shiny Application |
| ICsurv | Semiparametric Regression Analysis of Interval-Censored Data |
| icsw | Inverse Compliance Score Weighting |
| ICtest | Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction |
| ICV | Indirect Cross-Validation (ICV) for Kernel Density Estimation |
| ICvectorfields | Vector Fields from Spatial Time Series of Population Abundance |
| idar | Individual Diversity-Area Relationships |
| idbr | R Interface to the US Census Bureau International Data Base API |
| IDCard | Update Chinese ID Card Number to Eighteen Digits |
| IDConverter | Convert Identifiers in Biological Databases |
| IDE | Integro-Difference Equation Spatio-Temporal Models |
| IDEAFilter | Agnostic, Idiomatic Data Filter Module for Shiny |
| ideamdb | Easy Manipulation of IDEAM's Climatological Data |
| idefix | Efficient Designs for Discrete Choice Experiments |
| idem | Inference in Randomized Controlled Trials with Death and Missingness |
| idendr0 | Interactive Dendrograms |
| ider | Various Methods for Estimating Intrinsic Dimension |
| IDetect | Isolate-Detect Methodology for Multiple Change-Point Detection |
| IDF | Estimation and Plotting of IDF Curves |
| iDINGO | Integrative Differential Network Analysis in Genomics |
| idiogramFISH | Shiny App. Idiograms with Marks and Karyotype Indices |
| idm | Incremental Decomposition Methods |
| IDmeasurer | Assessment of Individual Identity in Animal Signals |
| IDmining | Intrinsic Dimension for Data Mining |
| idmodelr | Infectious Disease Model Library and Utilities |
| idmTPreg | Regression Model for Progressive Illness Death Data |
| iDOS | Integrated Discovery of Oncogenic Signatures |
| iDOVE | Durability of Vaccine Efficacy Against SARS-CoV-2 Infection |
| IDPmisc | 'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)' |
| IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |
| idr | Irreproducible Discovery Rate |
| ids | Generate Random Identifiers |
| IDSA | An Interactive Detector for Spatial Associations |
| IDSL.IPA | Intrinsic Peak Analysis (IPA) for HRMS Data |
| IDSL.MXP | Parser for mzML, mzXML, and netCDF Files (Mass Spectrometry Data) |
| IDSL.SUFA | Simplified UFA |
| IDSL.UFA | United Formula Annotation (UFA) for HRMS Data Processing |
| IDSL.UFAx | Exhaustive Chemical Enumeration for United Formula Annotation |
| IDSpatialStats | Estimate Global Clustering in Infectious Disease |
| idx2r | Convert Files to and from IDX Format to Vectors, Matrices and Arrays |
| ie2misc | Irucka Embry's Miscellaneous USGS Functions |
| ie2miscdata | Irucka Embry's Miscellaneous USGS Data Collection |
| ieeeround | Functions to set and get the IEEE rounding mode |
| iemisc | Irucka Embry's Miscellaneous Functions |
| iemiscdata | Irucka Embry's Miscellaneous Data Collection |
| iemisctext | Irucka Embry's Miscellaneous Text Collection |
| IETD | Inter-Event Time Definition |
| IFAA | Robust Inference for Absolute Abundance in Microbiome Analysis |
| ifaTools | Toolkit for Item Factor Analysis with 'OpenMx' |
| IFC | Tools for Imaging Flow Cytometry |
| ifCNVR | Isolation-Forest Based 'CNV' Detection from 'NGS' Data |
| ifctools | Italian Fiscal Code ('Codice Fiscale') Utilities |
| iForecast | Machine Learning Time Series Forecasting |
| IFP | Identifying Functional Polymorphisms |
| ifs | Iterated Function Systems |
| ifultools | Insightful Research Tools |
| ig.vancouver.2014.topcolour | Instagram 2014 Vancouver Top Colour Dataset |
| IgAScores | Score Taxon-Level IgA Binding in IgA-Seq Experiments |
| iGasso | Statistical Tests and Utilities for Genetic Association |
| igate | Guided Analytics for Testing Manufacturing Parameters |
| igcop | Computational Tools for the IG and IGL Copula Families |
| iglu | Interpreting Glucose Data from Continuous Glucose Monitors |
| igoR | Intergovernmental Organizations Database |
| IGoRRR | A Shiny Interface for Simple Data Management |
| IGP | Interchangeable Gaussian Process Models |
| igraph | Network Analysis and Visualization |
| igraphdata | A Collection of Network Data Sets for the 'igraph' Package |
| igraphinshiny | Use 'shiny' to Demo 'igraph' |
| iGraphMatch | Tools for Graph Matching |
| igraphtosonia | Convert iGraph graps to SoNIA .son files |
| igrf | International Geomagnetic Reference Field |
| iGSEA | Integrative Gene Set Enrichment Analysis Approaches |
| IGST | Informative Gene Selection Tool |
| ihclust | Iterative Hierarchical Clustering (IHC) |
| iheatmapr | Interactive, Complex Heatmaps |
| iheiddown | For Writing Geneva Graduate Institute Documents |
| ihpdr | Download Data from the International House Price Database |
| IHSEP | Inhomogeneous Self-Exciting Process |
| iilasso | Independently Interpretable Lasso |
| iIneq | Computing Individual Components of the Gini and the Theil Indices |
| IIProductionUnknown | Analyzing Data Through of Percentage of Importance Indice (Production Unknown) and Its Derivations |
| IIVpredictor | Modeling Within Individual Variability as Predictor |
| ijtiff | Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files |
| ILSE | Linear Regression Based on 'ILSE' for Missing Data |
| imabc | Incremental Mixture Approximate Bayesian Computation (IMABC) |
| image.binarization | Binarize Images for Enhancing Optical Character Recognition |
| image.CannyEdges | Implementation of the Canny Edge Detector for Images |
| image.ContourDetector | Implementation of the Unsupervised Smooth Contour Line Detection for Images |
| image.CornerDetectionF9 | Find Corners in Digital Images with FAST-9 |
| image.CornerDetectionHarris | Implementation of the Harris Corner Detection for Images |
| image.dlib | Image Processing Functionality using the 'dlib' Package |
| image.libfacedetection | Convolutional Neural Network for Face Detection |
| image.LineSegmentDetector | Detect Line Segments in Images |
| image.Otsu | Otsu's Image Segmentation Method |
| image.textlinedetector | Segment Images in Text Lines and Words |
| image2data | Turn Images into Data Sets |
| imageData | Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer |
| imagefluency | Image Statistics Based on Processing Fluency |
| imagefx | Extract Features from Images |
| imager | Image Processing Library Based on 'CImg' |
| imagerExtra | Extra Image Processing Library Based on 'imager' |
| imageseg | Deep Learning Models for Image Segmentation |
| imageviewer | Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast |
| imaginator | Simulate General Insurance Policies and Losses |
| imagine | IMAGing engINEs, Tools for Application of Image Filters to Data Matrices |
| ImaginR | Delimit and Characterize Color Phenotype of the Pearl Oyster |
| IMak | Item Maker |
| imbalance | Preprocessing Algorithms for Imbalanced Datasets |
| imbibe | A Pipe-Friendly Image Calculator |
| imcExperiment | Mass Cytometry S4 Class Structure Pipeline for Images |
| IMD | Index of Multiple Deprivation Data for the UK |
| imdbapi | Get Movie, Television Data from the 'imdb' Database |
| IMEC | Ising Model of Explanatory Coherence |
| iMediate | Likelihood Methods for Mediation Analysis |
| imgpalr | Create Color Palettes from Images |
| imgrec | An Interface for Image Recognition |
| imguR | An Imgur.com API Client Package |
| IMIFA | Infinite Mixtures of Infinite Factor Analysers and Related Models |
| IMIX | Gaussian Mixture Model for Multi-Omics Data Integration |
| iml | Interpretable Machine Learning |
| IMmailgun | Send Emails using 'Mailgun' |
| immcp | Poly-Pharmacology Toolkit for Traditional Chinese Medicine Research |
| immer | Item Response Models for Multiple Ratings |
| Immigrate | Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection |
| immunarch | Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires |
| immuneSIM | Tunable Simulation of B- And T-Cell Receptor Repertoires |
| imola | CSS Layouts (Grid and Flexbox) Implementation for R/Shiny |
| IMP | Interactive Model Performance Evaluation |
| imp4p | Imputation for Proteomics |
| IMPACT | The Impact of Items |
| ImpactEffectsize | Calculation and Visualization of the Impact Effect Size Measure |
| impactflu | Quantification of Population-Level Impact of Vaccination |
| impactr | Mechanical Loading Prediction Through Accelerometer Data |
| impimp | Imprecise Imputation for Statistical Matching |
| implicitMeasures | Compute Scores for Different Implicit Measures |
| implied | Convert Between Bookmaker Odds and Probabilities |
| implyr | R Interface for Apache Impala |
| import | An Import Mechanism for R |
| ImportanceIndice | Analyzing Data Through of Percentage of Importance Indice and Its Derivations |
| importar | Enables Importing/Loading of Packages or Functions While Creating an Alias for Them |
| ImportExport | Import and Export Data |
| importinegi | Download and Manage Open Data from INEGI |
| impressionist.colors | Impressionism's Color Palettes |
| imptree | Classification Trees with Imprecise Probabilities |
| imputeFin | Imputation of Financial Time Series with Missing Values and/or Outliers |
| imputeGeneric | Ease the Implementation of Imputation Methods |
| imputeLCMD | A Collection of Methods for Left-Censored Missing Data Imputation |
| imputeMissings | Impute Missing Values in a Predictive Context |
| imputeMulti | Imputation Methods for Multivariate Multinomial Data |
| imputeR | A General Multivariate Imputation Framework |
| imputeREE | Impute Missing Rare Earth Element Data Using a Lattice-Strain Derived Method |
| ImputeRobust | Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape |
| imputeTestbench | Test Bench for the Comparison of Imputation Methods |
| imputeTS | Time Series Missing Value Imputation |
| imputeYn | Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares |
| iMRMC | Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics) |
| imsig | Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours |
| IMTest | Information Matrix Test for Generalized Partial Credit Models |
| in2extRemes | Into the extRemes Package |
| inaparc | Initialization Algorithms for Partitioning Cluster Analysis |
| inbreedR | Analysing Inbreeding Based on Genetic Markers |
| inca | Integer Calibration |
| incase | Pipe-Friendly Vector Replacement with Case Statements |
| INCATome | Internal Control Analysis of Translatome Studies by Microarrays |
| IncDTW | Incremental Calculation of Dynamic Time Warping |
| incgraph | Incremental Graphlet Counting for Network Optimisation |
| incidence | Compute, Handle, Plot and Model Incidence of Dated Events |
| incidence2 | Compute, Handle and Plot Incidence of Dated Events |
| incidental | Implements Empirical Bayes Incidence Curves |
| incidentally | Generates Incidence Matrices and Bipartite Graphs |
| IncomPair | Comparison of Means for the Incomplete Paired Data |
| incR | Analysis of Incubation Data |
| inctools | Incidence Estimation Tools |
| incubate | Parametric Time-to-Event Analysis with Variable Incubation Phases |
| indelmiss | Insertion Deletion Analysis While Accounting for Possible Missing Data |
| independence | Fast Rank-Based Independence Testing |
| independenceWeights | Estimates Weights for Confounding Control for Continuous-Valued Exposures |
| IndepTest | Nonparametric Independence Tests Based on Entropy Estimation |
| index0 | Zero-Based Indexing in R |
| IndexConstruction | Index Construction for Time Series Data |
| IndexNumber | Index Numbers in Social Sciences |
| IndexNumR | Index Number Calculation |
| IndianTaxCalc | Indian Income Tax Calculator |
| indicspecies | Relationship Between Species and Groups of Sites |
| indiedown | Individual R Markdown Templates |
| indirect | Elicitation of Independent Conditional Means Priors for Generalised Linear Models |
| InDisc | Obtaining and Estimating Unidimensional and Multidimensional IRT Dual Models |
| IndTestPP | Tests of Independence and Analysis of Dependence Between Point Processes in Time |
| industRial | Data, Functions and Support Materials from the Book "industRial Data Science" |
| inegiR | Integrate INEGI’s (Mexican Stats Office) API with R |
| ineq | Measuring Inequality, Concentration, and Poverty |
| ineqJD | Inequality Joint Decomposition |
| inet | Performing Inference on Networks with Regularization |
| iNEXT | Interpolation and Extrapolation for Species Diversity |
| infer | Tidy Statistical Inference |
| InferenceSMR | Inference About the Standardized Mortality Ratio when Evaluating the Effect of a Screening Program on Survival |
| inferference | Methods for Causal Inference with Interference |
| inferr | Inferential Statistics |
| infinitefactor | Bayesian Infinite Factor Models |
| InfiniumPurify | Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis |
| infix | Basic Infix Binary Operators |
| Inflation | Core Inflation |
| Inflect | Melt Curve Fitting and Melt Shift Analysis |
| inflection | Finds the Inflection Point of a Curve |
| InflectSSP | Melt Curve Fitting and Melt Shift Analysis |
| influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |
| influence.SEM | Case Influence in Structural Equation Models |
| influenceAUC | Identify Influential Observations in Binary Classification |
| influenceR | Software Tools to Quantify Structural Importance of Nodes in a Network |
| influential | Identification and Classification of the Most Influential Nodes |
| influxdbclient | InfluxDB 2.x Client for R |
| influxdbr | R Interface to InfluxDB |
| infoDecompuTE | Information Decomposition of Two-Phase Experiments |
| Information | Data Exploration with Information Theory (Weight-of-Evidence and Information Value) |
| InformationValue | Performance Analysis and Companion Functions for Binary Classification Models |
| InformativeCensoring | Multiple Imputation for Informative Censoring |
| informedSen | Sensitivity Analysis Informed by a Test for Bias |
| infotheo | Information-Theoretic Measures |
| InfoTrad | Calculates the Probability of Informed Trading (PIN) |
| infraFDTD.assist | IO Help for infraFDTD Model |
| Infusion | Inference Using Simulation |
| ingredients | Effects and Importances of Model Ingredients |
| ini | Read and Write '.ini' Files |
| injectoR | R Dependency Injection |
| InjurySeverityScore | Translate ICD-9 into Injury Severity Score |
| INLABMA | Bayesian Model Averaging with INLA |
| inlabru | Bayesian Latent Gaussian Modelling using INLA and Extensions |
| inldata | Collection of Datasets for the USGS-INL Aquifer Monitoring Networks |
| inline | Functions to Inline C, C++, Fortran Function Calls from R |
| inlinedocs | Convert Inline Comments to Documentation |
| inlmisc | Miscellaneous Functions for the USGS INL Project Office |
| inlpubs | USGS INL Project Office Publications |
| innsight | Get the Insights of your Neural Network |
| ino | Initialization of Numerical Optimization |
| inops | Infix Operators for Detection, Subsetting and Replacement |
| inpdfr | Analyse Text Documents Using Ecological Tools |
| inplace | In-place Operators for R |
| InPosition | Inference Tests for ExPosition |
| INQC | Quality Control of Climatological Daily Time Series |
| insane | INsulin Secretion ANalysEr |
| insect | Informatic Sequence Classification Trees |
| insee | Tools to Easily Download Data from INSEE BDM Database |
| insiderTrades | Tools to Download Insider Transactions and Holdings |
| insight | Easy Access to Model Information for Various Model Objects |
| InSilicoVA | Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm |
| insol | Solar Radiation |
| InspectChangepoint | High-Dimensional Changepoint Estimation via Sparse Projection |
| inspectdf | Inspection, Comparison and Visualisation of Data Frames |
| inspector | Validation of Arguments and Objects in User-Defined Functions |
| INSPECTumours | IN-vivo reSPonsE Classification of Tumours |
| INSPIRE | Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets |
| install.load | Check, Install and Load CRAN & USGS GRAN Packages |
| installr | Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) |
| instaR | Access to Instagram API via R |
| insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |
| insurancerating | Analytic Insurance Rating Techniques |
| intamap | Procedures for Automated Interpolation |
| IntCal | Radiocarbon Calibration Curves |
| intccr | Semiparametric Competing Risks Regression under Interval Censoring |
| intcensROC | AUC Estimation of Interval Censored Survival Data |
| integIRTy | Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory |
| integr | An Implementation of Interaction Graphs of Aleks Jakulin |
| IntegrateBs | Integration for B-Spline |
| IntegratedJM | Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature |
| IntegratedMRF | Integrated Prediction using Uni-Variate and Multivariate Random Forests |
| intensegRid | R Wrapper for the Carbon Intensity API |
| intensity.analysis | Intensity of Change for Comparing Categorical Maps from Sequential Intervals |
| intensitynet | Intensity Analysis of Spatial Point Patterns on Complex Networks |
| intePareto | Integrative Analysis of RNA-Seq and ChIP-Seq Data |
| interactionR | Full Reporting of Interaction Analyses |
| interactionRCS | Calculate Estimates in Models with Interaction |
| interactions | Comprehensive, User-Friendly Toolkit for Probing Interactions |
| interactionTest | Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots |
| Interatrix | Compute Chi-Square Measures with Corrections |
| InteRD | The Integrated and Robust Deconvolution |
| interep | Interaction Analysis of Repeated Measure Data |
| InterfaceqPCR | GUI to Analyse qPCR Results after PMA Treatment or not |
| interflex | Multiplicative Interaction Models Diagnostics and Visualization |
| interfr | Interference Color Charts for Polarized Light Microscopy |
| intergraph | Coercion Routines for Network Data Objects |
| interim | Scheduling Interim Analyses in Clinical Trials |
| interimApp | App for Scheduling Interim Analyses in Clinical Trials |
| interleave | Converts Tabular Data to Interleaved Vectors |
| interlineaR | Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software |
| interp | Interpolation Methods |
| interplex | Coercion Methods for Simplicial Complex Data Structures |
| interplot | Plot the Effects of Variables in Interaction Terms |
| interpret | Fit Interpretable Machine Learning Models |
| interpretCI | Estimate the Confidence Interval and Interpret Step by Step |
| InterpretMSSpectrum | Interpreting High Resolution Mass Spectra |
| interpretR | Binary Classifier and Regression Model Interpretation Functions |
| inters | Flexible Tools for Estimating Interactions |
| InterSIM | Simulation of Inter-Related Genomic Datasets |
| InterVA4 | Replicate and Analyse 'InterVA4' |
| InterVA5 | Replicate and Analyse 'InterVA5' |
| interval | Weighted Logrank Tests and NPMLE for Interval Censored Data |
| intervalaverage | Time-Weighted Averaging for Interval Data |
| IntervalQuestionStat | Tools to Deal with Interval-Valued Responses in Questionnaires |
| intervals | Tools for Working with Points and Intervals |
| IntervalSurgeon | Operating on Integer-Bounded Intervals |
| intervcomp | Hypothesis Testing Using the Overlapping Interval Estimates |
| inTextSummaryTable | Creation of in-Text Summary Table |
| inti | Tools and Statistical Procedures in Plant Science |
| intkrige | A Numerical Implementation of Interval-Valued Kriging |
| intmed | Mediation Analysis using Interventional Effects |
| IntNMF | Integrative Clustering of Multiple Genomic Dataset |
| inTrees | Interpret Tree Ensembles |
| intRegGOF | Integrated Regression Goodness of Fit |
| INTRIGUE | Quantify and Control Reproducibility in High-Throughput Experiments |
| intRinsic | Likelihood-Based Intrinsic Dimension Estimators |
| intrinsicDimension | Intrinsic Dimension Estimation |
| intrval | Relational Operators for Intervals |
| intRvals | Analysis of Time-Ordered Event Data with Missed Observations |
| intsurv | Integrative Survival Modeling |
| intsvy | International Assessment Data Manager |
| inum | Interval and Enum-Type Representation of Vectors |
| invacost | Analyse Biological Invasion Costs with the 'InvaCost' Database |
| InvariantCausalPrediction | Invariant Causal Prediction |
| InvasionCorrection | Invasion Correction |
| invctr | Infix Functions For Vector Operations |
| inventorize | Inventory Analytics, Pricing and Markdowns |
| Inventorymodel | Inventory Models |
| inverseRegex | Reverse Engineers Regular Expression Patterns for R Objects |
| invertiforms | Invertible Transforms for Matrices |
| investr | Inverse Estimation/Calibration Functions |
| invgamma | The Inverse Gamma Distribution |
| invGauss | Threshold Regression that Fits the (Randomized Drift) Inverse Gaussian Distribution to Survival Data |
| invLT | Inversion of Laplace-Transformed Functions |
| iNZightMR | Tools for Exploring Multiple Response Data |
| iNZightPlots | Graphical Tools for Exploring Data with 'iNZight' |
| iNZightRegression | Tools for Exploring Regression Models with 'iNZight' |
| iNZightTools | Tools for 'iNZight' |
| iNZightTS | Time Series for 'iNZight' |
| io | A Unified Framework for Input-Output Operations in R |
| ioanalysis | Input Output Analysis |
| IOHanalyzer | Data Analysis Part of 'IOHprofiler' |
| IOHexperimenter | Benchmarking Part of the 'IOHprofiler' |
| ioncopy | Calling Copy Number Alterations in Amplicon Sequencing Data |
| ionr | Test for Indifference of Indicator |
| iopsych | Methods for Industrial/Organizational Psychology |
| iosmooth | Functions for Smoothing with Infinite Order Flat-Top Kernels |
| iotables | Reproducible Input-Output Economics Analysis, Economic and Environmental Impact Assessment with Empirical Data |
| iotools | I/O Tools for Streaming |
| ip2location | Lookup for IP Address Information |
| ip2proxy | Lookup for IP Address Proxy Information |
| ipa | Convert Between Phonetic Alphabets |
| ipaddress | Tidy IP Addresses |
| ipADMIXTURE | Iterative Pruning Population Admixture Inference Framework |
| ipc | Tools for Message Passing Between Processes |
| IPCAPS | Iterative Pruning to Capture Population Structure |
| IPCWK | Kendall's Tau Partial Corr. for Survival Trait and Biomarkers |
| ipcwswitch | Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials |
| IPDFileCheck | Basic Functions to Check Readability, Consistency, and Content of an Individual Participant Data File |
| IPDfromKM | Map Digitized Survival Curves Back to Individual Patient Data |
| ipdw | Spatial Interpolation by Inverse Path Distance Weighting |
| ipeadatar | API Wrapper for 'Ipeadata' |
| IPEC | Root Mean Square Curvature Calculation |
| IPEDSuploadables | Transforms Institutional Data into Text Files for IPEDS Automated Import/Upload |
| ipflasso | Integrative Lasso with Penalty Factors |
| ipfp | Fast Implementation of the Iterative Proportional Fitting Procedure in C |
| ipfr | List Balancing for Reweighting and Population Synthesis |
| ipft | Indoor Positioning Fingerprinting Toolset |
| ipkg | Install R Packages on GitHub from Hub.fastgit.xyz |
| IPLGP | Identification of Parental Lines via Genomic Prediction |
| iplots | iPlots - Interactive Graphics for R |
| IPMbook | Functions and Data for the Book 'Integrated Population Models' |
| ipmr | Integral Projection Models |
| IPPP | Inhomogeneous Poisson Point Processes |
| ipr | Iterative Proportional Repartition Algorithm |
| ipred | Improved Predictors |
| iprior | Regression Modelling using I-Priors |
| ips | Interfaces to Phylogenetic Software in R |
| ipsecr | Spatially Explicit Capture-Recapture by Inverse Prediction |
| ipsfs | Intuitionistic, Pythagorean, and Spherical Fuzzy Similarity Measure |
| iptools | Manipulate, Validate and Resolve 'IP' Addresses |
| ipumsr | Read 'IPUMS' Extract Files |
| IPV | Item Pool Visualization |
| ipw | Estimate Inverse Probability Weights |
| IPWboxplot | Adapted Boxplot to Missing Observations |
| ipwCoxCSV | Inverse Probability Weighted Cox Model with Corrected Sandwich Variance |
| ipwErrorY | Inverse Probability Weighted Estimation of Average Treatment Effect with Misclassified Binary Outcome |
| IPWpn | Inverse-Propensity-Weighting for Partially Nested Designs |
| iq | Protein Quantification in Mass Spectrometry-Based Proteomics |
| IQCC | Improved Quality Control Charts |
| ir | Functions to Handle and Preprocess Infrared Spectra |
| irace | Iterated Racing for Automatic Algorithm Configuration |
| iRafNet | Integrative Random Forest for Gene Regulatory Network Inference |
| irboost | Iteratively Reweighted Boosting for Robust Analysis |
| IRCcheck | Irrepresentable Condition Check |
| ircor | Correlation Coefficients for Information Retrieval |
| IRdisplay | 'Jupyter' Display Machinery |
| iRegression | Regression Methods for Interval-Valued Variables |
| iRepro | Reproducibility for Interval-Censored Data |
| Irescale | Calculate and Rectify Moran's I |
| IRexamples | Collection of Practical Institutional Research Examples and Tutorials |
| irg | Instantaneous Rate of Green Up |
| iriR | Global Innovation Through Company Level Data |
| IrishDirectorates | A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 |
| IRISMustangMetrics | Statistics and Metrics for Seismic Data |
| IRISSeismic | Classes and Methods for Seismic Data Analysis |
| IRkernel | Native R Kernel for the 'Jupyter Notebook' |
| irlba | Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices |
| iRoCoDe | Incomplete Row-Column Designs |
| IRon | Solving Imbalanced Regression Tasks |
| irr | Various Coefficients of Interrater Reliability and Agreement |
| irrCAC | Computing Chance-Corrected Agreement Coefficients (CAC) |
| IrregLong | Analysis of Longitudinal Data with Irregular Observation Times |
| irrICC | Intraclass Correlations for Quantifying Inter-Rater Reliability |
| irrNA | Coefficients of Interrater Reliability – Generalized for Randomly Incomplete Datasets |
| irt | Item Response Theory and Computerized Adaptive Testing Functions |
| IRTBEMM | Family of Bayesian EMM Algorithm for Item Response Models |
| irtDemo | Item Response Theory Demo Collection |
| irtGUI | Item Response Theory Analysis with a Graphic User Interface |
| irtoys | A Collection of Functions Related to Item Response Theory (IRT) |
| irtplay | Unidimensional Item Response Theory Modeling |
| irtrees | Estimation of Tree-Based Item Response Models |
| irtreliability | Item Response Theory Reliability |
| IRTShiny | Item Response Theory via Shiny |
| isa2 | The Iterative Signature Algorithm |
| isaeditor | Tools to Manipulate ISA-Tab Files |
| ISAT | Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output |
| isatabr | Implementation for the ISA Abstract Model |
| ISCO08ConveRsions | Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name |
| iscoCrosswalks | Crosswalks Between Classifications of Occupations |
| Iscores | Proper Scoring Rules for Missing Value Imputation |
| isdals | Provides Datasets for Introduction to Statistical Data Analysis for the Life Sciences |
| iSDM | Invasive Species Distribution Modelling |
| isdparser | Parse 'NOAA' Integrated Surface Data Files |
| iSFun | Integrative Dimension Reduction Analysis for Multi-Source Data |
| IsingFit | Fitting Ising Models Using the ELasso Method |
| isingLenzMC | Monte Carlo for Classical Ising Model |
| IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |
| islasso | The Induced Smoothed Lasso |
| ISLR | Data for an Introduction to Statistical Learning with Applications in R |
| ISLR2 | Introduction to Statistical Learning, Second Edition |
| ISM | Interpretive Structural Modelling (ISM) |
| ismev | An Introduction to Statistical Modeling of Extreme Values |
| isni | Index of Local Sensitivity to Nonignorability |
| isnullptr | Check if an 'externalptr' is a Null Pointer |
| Iso | Functions to Perform Isotonic Regression |
| isoband | Generate Isolines and Isobands from Regularly Spaced Elevation Grids |
| isoboost | Isotonic Boosting Classification Rules |
| isobxr | Stable Isotope Box Modelling in R |
| isocalcR | Isotope Calculations in R |
| isocat | Isotope Origin Clustering and Assignment Tools |
| IsoCheck | Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions |
| isocir | Isotonic Inference for Circular Data |
| ISOcodes | Selected ISO Codes |
| IsoCorr | Correcting Drift and Carry-over in Continuous Isotopic Measurements |
| isodistrreg | Isotonic Distributional Regression (IDR) |
| IsoGene | Order-Restricted Inference for Microarray Experiments |
| isogeochem | Tools for Stable Isotope Geochemistry |
| isokernel | Isolation Kernel |
| IsoMemo | Retrieve Data using the 'IsoMemo' API |
| isopat | Calculation of isotopic pattern for a given molecular formula |
| IsoplotR | Statistical Toolbox for Radiometric Geochronology |
| IsoplotRgui | Web Interface to 'IsoplotR' |
| ISOpureR | Deconvolution of Tumour Profiles |
| IsoriX | Isoscape Computation and Inference of Spatial Origins using Mixed Models |
| IsoSpecR | The IsoSpec Algorithm |
| isoSurv | Isotonic Regression on Survival Analysis |
| isotone | Active Set and Generalized PAVA for Isotone Optimization |
| isotonic.pen | Penalized Isotonic Regression in one and two dimensions |
| IsotopeR | Stable Isotope Mixing Model |
| isotracer | Isotopic Tracer Analysis Using MCMC |
| isotree | Isolation-Based Outlier Detection |
| isoWater | Discovery, Retrieval, and Analysis of Water Isotope Data |
| ISOweek | Week of the year and weekday according to ISO 8601 |
| ispd | Incomplete Split-Plot Designs |
| isqg | In Silico Quantitative Genetics |
| ISR | The Iterated Score Regression-Based Estimation Algorithm |
| ISRaD | Tools and Data for the International Soil Radiocarbon Database |
| iSTATS | A Graphical Interface to Perform STOCSY Analyses on NMR Data |
| iSubGen | Integrative Subtype Generation |
| isva | Independent Surrogate Variable Analysis |
| ISwR | Introductory Statistics with R |
| italy | The Italian Survey on Household and Wealth, 2008 and 2010 |
| itan | Item Analysis for Multiple Choice Tests |
| itcSegment | Individual Tree Crowns Segmentation |
| itdr | Integral Transformation Methods for SDR in Regression |
| itemanalysis | Classical Test Theory Item Analysis |
| iTensor | ICA-Based Matrix/Tensor Decomposition |
| iterators | Provides Iterator Construct |
| iterLap | Approximate Probability Densities by Iterated Laplace Approximations |
| iterpc | Efficient Iterator for Permutations and Combinations |
| itertools | Iterator Tools |
| itertools2 | itertools2: Functions creating iterators for efficient looping |
| ITNr | Analysis of the International Trade Network |
| iTOP | Inferring the Topology of Omics Data |
| itp | The Interpolate, Truncate, Project (ITP) Root-Finding Algorithm |
| itraxR | Itrax Data Analysis Tools |
| ITRLearn | Statistical Learning for Individualized Treatment Regime |
| ITRSelect | Variable Selection for Optimal Individualized Dynamic Treatment Regime |
| its.analysis | Running Interrupted Time Series Analysis |
| itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |
| itscalledsoccer | American Soccer Analysis API Client |
| itsdm | Isolation Forest-Based Presence-Only Species Distribution Modeling |
| itsmr | Time Series Analysis Using the Innovations Algorithm |
| iva | Instrumental Variable Analysis in Case-Control Association Studies |
| ivaBSS | Tools for Independent Vector Analysis |
| ivdesc | Profiling Compliers and Non-Compliers for Instrumental Variable Analysis |
| ivdesign | Hypothesis Testing in Cluster-Randomized Encouragement Designs |
| ivdoctr | Ensures Mutually Consistent Beliefs When Using IVs |
| ivgets | General to Specific Modeling and Indicator Saturation in 2SLS Models |
| ivitr | Estimate IV-Optimal Individualized Treatment Rules |
| ivmodel | Statistical Inference and Sensitivity Analysis for Instrumental Variables Model |
| ivmte | Instrumental Variables: Extrapolation by Marginal Treatment Effects |
| ivprobit | Instrumental Variables Probit Model |
| ivreg | Instrumental-Variables Regression by '2SLS', '2SM', or '2SMM', with Diagnostics |
| ivregEX | Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis |
| ivs | Interval Vectors |
| ivsacim | Structural Additive Cumulative Intensity Models with IV |
| ivtools | Instrumental Variables |
| ivx | Robust Econometric Inference |
| IVYplot | Produces an IVY Plot (Similar to Dot Plot) with/without Frequencies |
| iWeigReg | Improved Methods for Causal Inference and Missing Data Problems |
| iWISA | Wavelet-Based Index of Storm Activity |
| ixplorer | Easy DataOps for R Users |
| IxPopDyMod | Framework for Tick Population and Infection Modeling |
| iZID | Identify Zero-Inflated Distributions |
| jaatha | Simulation-Based Maximum Likelihood Parameter Estimation |
| jab.adverse.reactions | Possible Adverse Events/Reactions from the Vaccinations/Experimental Gene Therapies |
| jaccard | Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients |
| jack | Jack, Zonal, and Schur Polynomials |
| jackalope | A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator |
| jackknifeKME | Jackknife Estimates of Kaplan-Meier Estimators or Integrals |
| jackstrap | Correcting Nonparametric Frontier Measurements for Outliers |
| jacobi | Jacobi Theta Functions and Related Functions |
| JacobiEigen | Classical Jacobi Eigenvalue Algorithm |
| jacpop | Jaccard Index for Population Structure Identification |
| JADE | Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria |
| jaggR | Supporting Files and Functions for the Book Bayesian Modelling with 'JAGS' |
| jagstargets | Targets for JAGS Workflows |
| jagsUI | A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses |
| jalcal | Conversion Between Jalali (Persian or Solar Hijri) and Gregorian Calendar Dates |
| JamendoR | Access to 'Jamendo' API |
| janeaustenr | Jane Austen's Complete Novels |
| janitor | Simple Tools for Examining and Cleaning Dirty Data |
| jaod | Directory of Open Access Journals Client |
| japanmesh | Functions for the Japanese Regional Mesh Codes ('JIS X 0410') |
| japanstat | Tools for Easy Use of 'e-Stat' API |
| jarbes | Just a Rather Bayesian Evidence Synthesis |
| JavaGD | Java Graphics Device |
| Jaya | Jaya, a Gradient-Free Optimization Algorithm |
| JBrowseR | An R Interface to the JBrowse 2 Genome Browser |
| jcext | Extended Classification of Weather Types |
| jcolors | Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2' |
| jcp | Joint Change Point Detection |
| JCRImpactFactor | Journal Citation Reports ('JCR') Impact Factor by 'Clarivate' 'Analytics' |
| Jdmbs | Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies |
| jds.rmd | R Markdown Templates for Journal of Data Science |
| jeek | A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models |
| jenga | Fast Extrapolation of Time Features using K-Nearest Neighbors |
| jetpack | A Friendly Package Manager |
| jetset | One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays |
| jfa | Bayesian and Classical Audit Sampling |
| JFE | Tools and GUI for Analyzing Time Series Data of Just Finance and Econometrics |
| JFM | Rock Mass Structural Analysis from 3D Mesh of Point Cloud |
| jgcricolors | Manage 'JGCRI' Color Palettes |
| JGEE | Joint Generalized Estimating Equation Solver |
| JGL | Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes |
| JGR | Java GUI for R |
| jgsbook | Package of the German Book "Statistik mit R und RStudio" by Joerg grosse Schlarmann |
| jiebaR | Chinese Text Segmentation |
| jiebaRD | Chinese Text Segmentation Data for jiebaR Package |
| jinjar | Template Engine Inspired by 'Jinja' |
| jipApprox | Approximate Inclusion Probabilities for Survey Sampling |
| JirAgileR | JIRA REST API Wrapper for R |
| jjb | Balamuta Miscellaneous |
| jlctree | Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data |
| JLPM | Joint Latent Process Models |
| jlsm | Joint Latent Space Model for Social Networks with Multivariate Attributes |
| JM | Joint Modeling of Longitudinal and Survival Data |
| JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |
| JMbayes2 | Extended Joint Models for Longitudinal and Time-to-Event Data |
| jmcm | Joint Mean-Covariance Models using 'Armadillo' and S4 |
| jmdem | Fitting Joint Mean and Dispersion Effects Models |
| JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |
| jmetrik | Tools for Interacting with 'jMetrik' |
| JMI | Jackknife Mutual Information |
| Jmisc | Julian Miscellaneous Function |
| jmotif | Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX |
| jmuOutlier | Permutation Tests for Nonparametric Statistics |
| jmv | The 'jamovi' Analyses |
| jmvconnect | Connect to the 'jamovi' Statistical Spreadsheet |
| jmvcore | Dependencies for the 'jamovi' Framework |
| jmvReadWrite | Read and Write 'jamovi' Files ('.omv') |
| job | Run Code as an RStudio Job - Free Your Console |
| jocre | Joint Confidence Regions |
| JoF | Modelling and Simulating Judgments of Frequency |
| joineR | Joint Modelling of Repeated Measurements and Time-to-Event Data |
| joineRML | Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes |
| joinet | Multivariate Elastic Net Regression |
| joint.Cox | Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis |
| JointAI | Joint Analysis and Imputation of Incomplete Data |
| jointDiag | Joint Approximate Diagonalization of a Set of Square Matrices |
| jointMeanCov | Joint Mean and Covariance Estimation for Matrix-Variate Data |
| JointModel | Semiparametric Joint Models for Longitudinal and Counting Processes |
| JointNets | End-to-End Sparse Gaussian Graphical Model Simulation, Estimation, Visualization, Evaluation and Application |
| jointNmix | Joint N-Mixture Models for Site-Associated Species |
| jointseg | Joint Segmentation of Multivariate (Copy Number) Signals |
| joinXL | Perform Joins or Minus Queries on 'Excel' Files |
| jomo | Multilevel Joint Modelling Multiple Imputation |
| JOPS | Practical Smoothing with P-Splines |
| jordan | A Suite of Routines for Working with Jordan Algebras |
| JoSAE | Unit-Level and Area-Level Small Area Estimation |
| josaplay | Add Josa Based on Previous Letter in Korean |
| jose | JavaScript Object Signing and Encryption |
| journalabbr | Journal Abbreviations for BibTeX Documents |
| JOUSBoost | Implements Under/Oversampling for Probability Estimation |
| joyn | Tool for Diagnosis of Tables Joins and Complementary Join Features |
| jpeg | Read and write JPEG images |
| JPEN | Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty |
| jpgrid | Functions for the Grid Square Codes in Japan |
| jpmesh | Utilities for Japanese Mesh Code |
| jpstat | Tools for Easy Use of 'e-Stat' API |
| JQL | Jump Q-Learning for Individualized Interval-Valued Dose Rule |
| jqr | Client for 'jq', a 'JSON' Processor |
| jquerylib | Obtain 'jQuery' as an HTML Dependency Object |
| jrc | Exchange Commands Between R and 'JavaScript' |
| JRF | Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks |
| jrich | Jack-Knife Support for Evolutionary Distinctiveness Indices I and W |
| jrt | Item Response Theory Modeling and Scoring for Judgment Data |
| jrvFinance | Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes |
| js | Tools for Working with JavaScript in R |
| JSconsole | A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console |
| jScore | Calculates the j-Score Between Two Clustering Assignments |
| jSDM | Joint Species Distribution Models |
| jshintr | Lint 'JavaScript' Files |
| jskm | Kaplan-Meier Plot with 'ggplot2' |
| JSM | Semiparametric Joint Modeling of Survival and Longitudinal Data |
| JSmediation | Mediation Analysis Using Joint Significance |
| jsmodule | 'RStudio' Addins and 'Shiny' Modules for Medical Research |
| json64 | A 'Base64' Encode/Decode Package with Support for JSON Output/Input and UTF-8 |
| jsonify | Convert Between 'R' Objects and Javascript Object Notation (JSON) |
| jsonld | JSON for Linking Data |
| jsonlite | A Simple and Robust JSON Parser and Generator for R |
| jsonstat | Interface to 'JSON-stat' |
| jsonStrings | Manipulation of JSON Strings |
| jsontools | Working with JSON Vectors |
| jsonvalidate | Validate 'JSON' Schema |
| jstable | Create Tables from Different Types of Regression |
| jstor | Read Data from JSTOR/DfR |
| jsTree | Create Interactive Trees with the 'jQuery' 'jsTree' Plugin |
| jsTreeR | A Wrapper of the JavaScript Library 'jsTree' |
| JSUparameters | Estimate Parameters of the Best-Fitting JohnsonSU Distribution |
| jti | Junction Tree Inference |
| jtools | Analysis and Presentation of Social Scientific Data |
| jubilee | Forecasting Long-Term Growth of the U.S. Stock Market and Business Cycles |
| juicr | Automated and Manual Extraction of Numerical Data from Scientific Images |
| Julia | Fractal Image Data Generator |
| JuliaCall | Seamless Integration Between R and 'Julia' |
| JuliaConnectoR | A Functionally Oriented Interface for Integrating 'Julia' with R |
| JumpeR | Importing and Working with Track and Field Data |
| junctions | The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages |
| just.install | Very Simple Function to Install Packages without Attaching |
| justifier | Human and Machine-Readable Justifications and Justified Decisions Based on 'YAML' |
| JustifyAlpha | Justifying Alpha Levels for Hypothesis Tests |
| jvcoords | Principal Component Analysis (PCA) and Whitening |
| jvnVaR | Value at Risk |
| JWileymisc | Miscellaneous Utilities and Functions |
| kableExtra | Construct Complex Table with 'kable' and Pipe Syntax |
| kader | Kernel Adaptive Density Estimation and Regression |
| kaigiroku | Programmatic Access to the API for Japanese Diet Proceedings |
| kairos | Analysis of Chronological Patterns from Archaeological Count Data |
| kamila | Methods for Clustering Mixed-Type Data |
| kangar00 | Kernel Approaches for Nonlinear Genetic Association Regression |
| kantorovich | Kantorovich Distance Between Probability Measures |
| kaos | Encoding of Sequences Based on Frequency Matrix Chaos Game Representation |
| kaphom | Test the Homogeneity of Kappa Statistics |
| KappaGUI | An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa |
| kappalab | Non-Additive Measure and Integral Manipulation Functions |
| kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |
| karaoke | Remove Vocals from a Song |
| karel | Learning programming with Karel the robot |
| KarsTS | An Interface for Microclimate Time Series Analysis |
| katex | Rendering Math to HTML, 'MathML', or R-Documentation Format |
| kayadata | Kaya Identity Data for Nations and Regions |
| kazaam | Tools for Tall Distributed Matrices |
| KbMvtSkew | Khattree-Bahuguna's Univariate and Multivariate Skewness |
| kcopula | The Bivariate K-Copula |
| kcpRS | Kernel Change Point Detection on the Running Statistics |
| KCSKNNShiny | K-Nearest Neighbour Classifier |
| KCSNBShiny | Naive Bayes Classifier |
| kde1d | Univariate Kernel Density Estimation |
| kdecopula | Kernel Smoothing for Bivariate Copula Densities |
| kdensity | Kernel Density Estimation with Parametric Starts and Asymmetric Kernels |
| kdevine | Multivariate Kernel Density Estimation with Vine Copulas |
| kdist | K-Distribution and Weibull Paper |
| kdpee | Fast Multidimensional Entropy Estimation by k-d Partitioning |
| kdtools | Tools for Working with Multidimensional Data |
| keep | Arrays with Better Control over Dimension Dropping |
| kehra | Collect, Assemble and Model Air Pollution, Weather and Health Data |
| kelvin | Calculate Solutions to the Kelvin Differential Equation using Bessel Functions |
| Kendall | Kendall Rank Correlation and Mann-Kendall Trend Test |
| kendallRandomWalks | Simulate and Visualize Kendall Random Walks and Related Distributions |
| KENDL | Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits |
| KenSyn | Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis |
| kequate | The Kernel Method of Test Equating |
| keras | R Interface to 'Keras' |
| kerasR | R Interface to the Keras Deep Learning Library |
| kerastuneR | Interface to 'Keras Tuner' |
| KERE | Expectile Regression in Reproducing Kernel Hilbert Space |
| kergp | Gaussian Process Laboratory |
| kerndwd | Distance Weighted Discrimination (DWD) and Kernel Methods |
| kernelFactory | Kernel Factory: An Ensemble of Kernel Machines |
| Kernelheaping | Kernel Density Estimation for Heaped and Rounded Data |
| KernelKnn | Kernel k Nearest Neighbors |
| kernelPhil | Kernel Smoothing Tools for Philology and Historical Dialectology |
| kernelPSI | Post-Selection Inference for Nonlinear Variable Selection |
| kernelshap | Kernel SHAP |
| kernhaz | Kernel Estimation of Hazard Function in Survival Analysis |
| kernlab | Kernel-Based Machine Learning Lab |
| kernplus | A Kernel Regression-Based Multidimensional Wind Turbine Power Curve |
| kernscr | Kernel Machine Score Test for Semi-Competing Risks |
| KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |
| KernSmoothIRT | Nonparametric Item Response Theory |
| kerSeg | New Kernel-Based Change-Point Detection |
| kerTests | Generalized Kernel Two-Sample Tests |
| kesernetwork | Visualization of the KESER Network |
| keyATM | Keyword Assisted Topic Models |
| Keyboard | Bayesian Designs for Early Phase Clinical Trials |
| KeyboardSimulator | Keyboard and Mouse Input Simulation for Windows OS |
| keyholder | Store Data About Rows |
| keyplayer | Locating Key Players in Social Networks |
| keypress | Wait for a Key Press in a Terminal |
| keyring | Access the System Credential Store from R |
| keyringr | Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain |
| keys | Keyboard Shortcuts for 'shiny' |
| keyToEnglish | Convert Data to Memorable Phrases |
| kfa | K-Fold Cross Validation for Factor Analysis |
| KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |
| kfda | Kernel Fisher Discriminant Analysis |
| kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |
| KFPCA | Kendall Functional Principal Component Analysis |
| kgc | Koeppen-Geiger Climatic Zones |
| KGode | Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations |
| kgrams | Classical k-gram Language Models |
| kgschart | KGS Rank Graph Parser |
| KHQ | Methods for Calculating 'KHQ' Scores and 'KHQ5D' Utility Index Scores |
| khroma | Colour Schemes for Scientific Data Visualization |
| kibior | A Simple Data Management and Sharing Tool |
| kidney.epi | Kidney Functions: Clinical and Epidemiological |
| kim | A Toolkit for Behavioral Scientists |
| kimisc | Kirill's Miscellaneous Functions |
| kin.cohort | Analysis of Kin-Cohort Studies |
| kindisperse | Simulate and Estimate Close-Kin Dispersal Kernels |
| kinematics | Studying Sampled Trajectories |
| KingCountyHouses | Data on House Sales in King County WA |
| kinship2 | Pedigree Functions |
| kirby21.base | Example Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.fmri | Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kirby21.t1 | Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource |
| kissmig | a Keep It Simple Species Migration Model |
| kit | Data Manipulation Functions Implemented in C |
| kitagawa | Spectral Response of Water Wells to Harmonic Strain and Pressure Signals |
| kiwisR | A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS' API |
| kknn | Weighted k-Nearest Neighbors |
| kko | Kernel Knockoffs Selection for Nonparametric Additive Models |
| klaR | Classification and Visualization |
| klassR | Classifications and Codelists for Statistics Norway |
| klausuR | Multiple Choice Test Evaluation |
| kldtools | Kullback-Leibler Divergence and Other Tools to Analyze Frequencies |
| klexdatr | Kootenay Lake Exploitation Study Data |
| KLexp | Kernel_lasso Expansion |
| klic | Kernel Learning Integrative Clustering |
| klsh | Blocking for Record Linkage |
| klustR | D3 Dynamic Cluster Visualizations |
| km.ci | Confidence Intervals for the Kaplan-Meier Estimator |
| kmc | Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm |
| kmed | Distance-Based k-Medoids |
| kmer | Fast K-Mer Counting and Clustering for Biological Sequence Analysis |
| kmi | Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting |
| kml | K-Means for Longitudinal Data |
| kml3d | K-Means for Joint Longitudinal Data |
| kmlShape | K-Means for Longitudinal Data using Shape-Respecting Distance |
| kmodR | K-Means with Simultaneous Outlier Detection |
| kmscv | K-Means Based Stratified Resampling |
| KMsurv | Data sets from Klein and Moeschberger (1997), Survival Analysis |
| KMunicate | KMunicate-Style Kaplan–Meier Plots |
| KnapsackSampling | Generate Feasible Samples of a Knapsack Problem |
| KneeArrower | Finds Cutoff Points on Knee Curves |
| knitcitations | Citations for 'Knitr' Markdown Files |
| knitLatex | 'Knitr' Helpers - Mostly Tables |
| knitr | A General-Purpose Package for Dynamic Report Generation in R |
| knitrBootstrap | 'knitr' Bootstrap Framework |
| knitrdata | Data Language Engine for 'knitr' / 'rmarkdown' |
| knitrProgressBar | Provides Progress Bars in 'knitr' |
| knn.covertree | An Accurate kNN Implementation with Multiple Distance Measures |
| knnp | Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel) |
| KNNShiny | Interactive Document for Working with KNN Analysis |
| kNNvs | k Nearest Neighbors with Grid Search Variable Selection |
| knnwtsim | K Nearest Neighbor Forecasting with a Tailored Similarity Metric |
| knockoff | The Knockoff Filter for Controlled Variable Selection |
| KnockoffScreen | Whole-Genome Sequencing Data Analysis via Knockoff Statistics |
| KnockoffTrio | Trio Data Analysis with Knockoff Statistics for FDR Control |
| knotR | Knot Diagrams using Bezier Curves |
| KnowBR | Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases |
| kntnr | R Client for 'kintone' API |
| KoboconnectR | Download Data from Kobotoolbox to R |
| KODAMA | Knowledge Discovery by Accuracy Maximization |
| kofdata | Get Data from the 'KOF Datenservice' API |
| kofnGA | A Genetic Algorithm for Fixed-Size Subset Selection |
| KOGMWU | Functional Summary and Meta-Analysis of Gene Expression Data |
| kohonen | Supervised and Unsupervised Self-Organising Maps |
| kokudosuuchi | Utilities for 'Kokudo Suuchi' |
| komaletter | Simply Beautiful PDF Letters from Markdown |
| konfound | Quantify the Robustness of Causal Inferences |
| KONPsurv | KONP Tests: Powerful K-Sample Tests for Right-Censored Data |
| koRpus | Text Analysis with Emphasis on POS Tagging, Readability, and Lexical Diversity |
| koRpus.lang.en | Language Support for 'koRpus' Package: English |
| kosel | Variable Selection by Revisited Knockoffs Procedures |
| KoulMde | Koul's Minimum Distance Estimation in Regression and Image Segmentation Problems |
| Kpart | Cubic Spline Fitting with Knot Selection |
| KPC | Kernel Partial Correlation Coefficient |
| kpcalg | Kernel PC Algorithm for Causal Structure Detection |
| kpeaks | Determination of K Using Peak Counts of Features for Clustering |
| kpmt | Known Population Median Test |
| kpodclustr | Method for Clustering Partially Observed Data |
| KraljicMatrix | A Quantified Implementation of the Kraljic Matrix |
| kriens | Continuation Passing Style Development |
| krige | Geospatial Kriging with Metropolis Sampling |
| kriging | Ordinary Kriging |
| KrigInv | Kriging-Based Inversion for Deterministic and Noisy Computer Experiments |
| krippendorffsalpha | Measuring Agreement Using Krippendorff's Alpha Coefficient |
| KRIS | Keen and Reliable Interface Subroutines for Bioinformatic Analysis |
| KRLS | Kernel-Based Regularized Least Squares |
| krm | Kernel Based Regression Models |
| KRMM | Kernel Ridge Mixed Model |
| ks | Kernel Smoothing |
| kSamples | K-Sample Rank Tests and their Combinations |
| KScorrect | Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests |
| KSD | Goodness-of-Fit Tests using Kernelized Stein Discrepancy |
| KSEAapp | Kinase-Substrate Enrichment Analysis |
| kselection | Selection of K in K-Means Clustering |
| KSgeneral | Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution |
| ksharp | Cluster Sharpening |
| ksNN | K* Nearest Neighbors Algorithm |
| KSPM | Kernel Semi-Parametric Models |
| ksrlive | Identify Kinase Substrate Relationships Using Dynamic Data |
| kssa | Known Sub-Sequence Algorithm |
| kst | Knowledge Space Theory |
| kStatistics | Unbiased Estimators for Cumulant Products and Faa Di Bruno's Formula |
| kstIO | Knowledge Space Theory Input/Output |
| kstMatrix | Basic Functions in Knowledge Space Theory Using Matrix Representation |
| ktaucenters | Robust Clustering Procedures |
| KTensorGraphs | Co-Tucker3 Analysis of Two Sequences of Matrices |
| ktsolve | Configurable Function for Solving Families of Nonlinear Equations |
| kuiper.2samp | Two-Sample Kuiper Test |
| Kurt | Performs Kurtosis-Based Statistical Analyses |
| kutils | Project Management Tools |
| kvh | Read/Write Files in Key-Value-Hierarchy Format |
| kwb.hantush | Calculation of Groundwater Mounding Beneath an Infiltration Basin |
| kyotil | Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies |
| kza | Kolmogorov-Zurbenko Adaptive Filters |
| kzs | Kolmogorov-Zurbenko Spatial Smoothing and Applications |
| l0ara | Sparse Generalized Linear Model with L0 Approximation for Feature Selection |
| L0Learn | Fast Algorithms for Best Subset Selection |
| l1ball | L1-Ball Prior for Sparse Regression |
| l1kdeconv | Deconvolution for LINCS L1000 Data |
| L1mstate | L1-Regularized Multi-State Models |
| l1spectral | An L1-Version of the Spectral Clustering |
| l2boost | Exploring Friedman's Boosting Algorithm for Regularized Linear Regression |
| L2DensityGoFtest | Density Goodness-of-Fit Test |
| L2E | Robust Structured Regression via the L2 Criterion |
| LA | Lioness Algorithm (LA) |
| LabApplStat | Miscellaneous Scripts from the Data Science Laboratory (UCPH) |
| labdsv | Ordination and Multivariate Analysis for Ecology |
| label.switching | Relabelling MCMC Outputs of Mixture Models |
| labeling | Axis Labeling |
| labelled | Manipulating Labelled Data |
| labelmachine | Make Labeling of R Data Sets Easy |
| labelVector | Label Attributes for Atomic Vectors |
| lablaster | Laser Ablation Blast Through Endpoint Detection |
| LabourMarketAreas | Identification, Tuning, Visualisation and Analysis of Labour Market Areas |
| labourR | Classify Multilingual Labour Market Free-Text to Standardized Hierarchical Occupations |
| LabRS | Laboratorio di "Ricerca Sociale con R" |
| labsimplex | Simplex Optimization Algorithms for Laboratory and Manufacturing Processes |
| labstatR | Libreria Del Laboratorio Di Statistica Con R |
| labstats | Data Sets for the Book "Experimental Design for Laboratory Biologists" |
| lacm | Latent Autoregressive Count Models |
| lacrmr | Connect to the 'Less Annoying CRM' API |
| lactater | Tools for Analyzing Lactate Thresholds |
| lactcurves | Lactation Curve Parameter Estimation |
| lacunaritycovariance | Gliding Box Lacunarity and Other Metrics for 2D Random Closed Sets |
| laeken | Estimation of Indicators on Social Exclusion and Poverty |
| LaF | Fast Access to Large ASCII Files |
| lagged | Classes and Methods for Lagged Objects |
| LAGOSNE | Interface to the Lake Multi-Scaled Geospatial and Temporal Database |
| laGP | Local Approximate Gaussian Process Regression |
| lagsarlmtree | Spatial Lag Model Trees |
| LagSequential | Lag-Sequential Categorical Data Analysis |
| Lahman | Sean 'Lahman' Baseball Database |
| LakeMetabolizer | Tools for the Analysis of Ecosystem Metabolism |
| lakemorpho | Lake Morphometry Metrics |
| laketemps | Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009 |
| LAM | Some Latent Variable Models |
| lambda.r | Modeling Data with Functional Programming |
| lambdaTS | Variational Seq2Seq Model with Lambda Transformer for Time Series Analysis |
| lambdr | Create a Runtime for Serving Containerised R Functions on 'AWS Lambda' |
| LambertW | Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data |
| lamme | Log-Analytic Methods for Multiplicative Effects |
| lamW | Lambert-W Function |
| landest | Landmark Estimation of Survival and Treatment Effect |
| Landmarking | Analysis using Landmark Models |
| landpred | Landmark Prediction of a Survival Outcome |
| landsat | Radiometric and Topographic Correction of Satellite Imagery |
| landsat8 | Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature |
| landscapemetrics | Landscape Metrics for Categorical Map Patterns |
| landscapeR | Categorical Landscape Simulation Facility |
| landscapetools | Landscape Utility Toolbox |
| landsepi | Landscape Epidemiology and Evolution |
| Langevin | Langevin Analysis in One and Two Dimensions |
| langevitour | Langevin Tour |
| languagelayeR | Access the 'languagelayer' API |
| languageR | Analyzing Linguistic Data: A Practical Introduction to Statistics |
| languageserver | Language Server Protocol |
| languageserversetup | Automated Setup and Auto Run for R Language Server |
| lans2r | Work with Look at NanoSIMS Data in R |
| LaplaceDeconv | Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval |
| LaplacesDemon | Complete Environment for Bayesian Inference |
| lar | History of labour relations package |
| lares | Analytics & Machine Learning Sidekick |
| LARF | Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects |
| LARGB | Leaf Area Determination from Visual Image |
| largeList | Serialization Interface for Large List Objects |
| LARisk | Estimation of Lifetime Attributable Risk of Cancer from Radiation Exposure |
| lars | Least Angle Regression, Lasso and Forward Stagewise |
| LassoBacktracking | Modelling Interactions in High-Dimensional Data with Backtracking |
| LassoGEE | High-Dimensional Lasso Generalized Estimating Equations |
| LassoNet | 3CoSE Algorithm |
| lassopv | Nonparametric P-Value Estimation for Predictors in Lasso |
| lassoshooting | L1 Regularized Regression (Lasso) Solver using the Cyclic Coordinate Descent Algorithm aka Lasso Shooting |
| LassoSIR | Sparsed Sliced Inverse Regression via Lasso |
| latdiag | Draws Diagrams Useful for Checking Latent Scales |
| latentcor | Fast Computation of Latent Correlations for Mixed Data |
| latentgraph | Graphical Models with Latent Variables |
| latentnet | Latent Position and Cluster Models for Statistical Networks |
| later | Utilities for Scheduling Functions to Execute Later with Event Loops |
| Laterality | Functions to Calculate Common Laterality Statistics in Primatology |
| latex2exp | Use LaTeX Expressions in Plots |
| latexdiffr | Diff 'rmarkdown' Files Using the 'latexdiff' Utility |
| latexpdf | Convert Tables to PDF or PNG |
| latte | Interface to 'LattE' and '4ti2' |
| lattice | Trellis Graphics for R |
| latticeDensity | Density Estimation and Nonparametric Regression on Irregular Regions |
| LatticeDesign | Lattice-Based Space-Filling Designs |
| latticeExtra | Extra Graphical Utilities Based on Lattice |
| LatticeKrig | Multi-Resolution Kriging Based on Markov Random Fields |
| lava | Latent Variable Models |
| lavaan | Latent Variable Analysis |
| lavaan.shiny | Latent Variable Analysis with Shiny |
| lavaan.survey | Complex Survey Structural Equation Modeling (SEM) |
| lavaanPlot | Path Diagrams for 'Lavaan' Models via 'DiagrammeR' |
| lavacreg | Latent Variable Count Regression Models |
| LavaCvxr | Lava Estimation for the Sum of Sparse and Dense Signals(3 Methods) |
| lavaSearch2 | Tools for Model Specification in the Latent Variable Framework |
| Lavash | Lava Estimation for the Sum of Sparse and Dense Signals |
| LAWBL | Latent (Variable) Analysis with Bayesian Learning |
| lawstat | Tools for Biostatistics, Public Policy, and Law |
| lax | Loglikelihood Adjustment for Extreme Value Models |
| layer | Tilts your Maps and Turns Them into Ggplot Objects |
| lazy | Lazy Learning for Local Regression |
| lazyarray | Persistent Large Data Array with Lazy-Loading on Demand |
| lazybar | Progress Bar with Remaining Time Forecast Method |
| lazyData | A LazyData Facility |
| lazyeval | Lazy (Non-Standard) Evaluation |
| lazygreedy | Applying the Lazy-Greedy Spanning Algorithm |
| lazyraster | Generate Raster Data Lazily from 'GDAL' |
| lazysf | Delayed Read for 'GDAL' Vector Data Sources |
| lazysql | Lazy SQL Programming |
| lazytrade | Learn Computer and Data Science using Algorithmic Trading |
| lazyWeave | LaTeX Wrappers for R Users |
| lba | Latent Budget Analysis for Compositional Data |
| lbfgs | Limited-memory BFGS Optimization |
| lbfgsb3c | Limited Memory BFGS Minimizer with Bounds on Parameters with optim() 'C' Interface |
| lbm | Log Binomial Regression Model in Exact Method |
| lboxcox | Implementation of Logistic Box-Cox Regression |
| LBPG | The Length-Biased Power Garima Distribution |
| lbreg | Log-Binomial Regression with Constrained Optimization |
| LBSPR | Length-Based Spawning Potential Ratio |
| LCA | Localised Co-Dependency Analysis |
| LCAextend | Latent Class Analysis (LCA) with Familial Dependence in Extended Pedigrees |
| lcars | LCARS Aesthetic for Shiny |
| LCAvarsel | Variable Selection for Latent Class Analysis |
| LCCR | Latent Class Capture-Recapture Models |
| lcda | Latent Class Discriminant Analysis |
| LCF | Linear Combination Fitting |
| LCFdata | Data sets for package “LMERConvenienceFunctions” |
| lchemix | A Bayesian Multi-Dimensional Couple-Based Latent Risk Model |
| lclGWAS | Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data |
| LCMCR | Bayesian Non-Parametric Latent-Class Capture-Recapture |
| lcmm | Extended Mixed Models Using Latent Classes and Latent Processes |
| lconnect | Simple Tools to Compute Landscape Connectivity Metrics |
| lcopula | Liouville Copulas |
| LCox | A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data |
| lcpm | Ordinal Outcomes: Generalized Linear Models with the Log Link |
| lcra | Bayesian Joint Latent Class and Regression Models |
| lcsm | Univariate and Bivariate Latent Change Score Modeling |
| lctools | Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools |
| lcyanalysis | Stock Data Analysis Functions |
| lda | Collapsed Gibbs Sampling Methods for Topic Models |
| LDABiplots | Biplot Graphical Interface for LDA Models |
| ldamatch | Selection of Statistically Similar Research Groups |
| ldaPrototype | Prototype of Multiple Latent Dirichlet Allocation Runs |
| LDAShiny | User-Friendly Interface for Review of Scientific Literature |
| ldat | Large Data Sets |
| LDATS | Latent Dirichlet Allocation Coupled with Time Series Analyses |
| ldatuning | Tuning of the Latent Dirichlet Allocation Models Parameters |
| LDAvis | Interactive Visualization of Topic Models |
| ldbod | Local Density-Based Outlier Detection |
| ldbounds | Lan-DeMets Method for Group Sequential Boundaries |
| LDcorSV | Linkage Disequilibrium Corrected by the Structure and the Relatedness |
| lddmm | Longitudinal Drift-Diffusion Mixed Models (LDDMM) |
| LDheatmap | Graphical Display of Pairwise Linkage Disequilibria Between SNPs |
| ldhmm | Hidden Markov Model for Financial Time-Series Based on Lambda Distribution |
| LDLcalc | Calculate and Predict the Low Density Lipoprotein Values |
| LDlinkR | Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest |
| LDNN | Longitudinal Data Neural Network |
| LDRTools | Tools for Linear Dimension Reduction |
| ldsep | Linkage Disequilibrium Shrinkage Estimation for Polyploids |
| ldsr | Linear Dynamical System Reconstruction |
| leabRa | The Artificial Neural Networks Algorithm Leabra |
| leaderCluster | Leader Clustering Algorithm |
| LeafArea | Rapid Digital Image Analysis of Leaf Area |
| leafdown | Provides Drill Down Functionality for 'leaflet' Choropleths |
| leafem | 'leaflet' Extensions for 'mapview' |
| leafgl | High-Performance 'WebGl' Rendering for Package 'leaflet' |
| leaflegend | Add Custom Legends to 'leaflet' Maps |
| leaflet | Create Interactive Web Maps with the JavaScript 'Leaflet' Library |
| leaflet.esri | 'ESRI' Bindings for the 'leaflet' Package |
| leaflet.extras | Extra Functionality for 'leaflet' Package |
| leaflet.extras2 | Extra Functionality for 'leaflet' Package |
| leaflet.minicharts | Mini Charts for Interactive Maps |
| leaflet.multiopacity | Leaflet Multiple Opacity Controls for R |
| leaflet.opacity | Opacity Controls for Leaflet Maps |
| leaflet.providers | Leaflet Providers |
| leafletCN | An R Gallery for China and Other Geojson Choropleth Map in Leaflet |
| leafpm | Leaflet Map Plugin for Drawing and Editing |
| leafpop | Include Tables, Images and Graphs in Leaflet Pop-Ups |
| leafR | Calculates the Leaf Area Index (LAD) and Other Related Functions |
| leafSTAR | Silhouette to Area Ratio of Tilted Surfaces |
| leafsync | Small Multiples for Leaflet Web Maps |
| leaftime | 'Leaflet-timeline' Plugin for Leaflet |
| leanpubr | 'Leanpub' API Interface |
| LEANR | Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes |
| LEAP | Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering |
| leapp | Latent Effect Adjustment After Primary Projection |
| leaps | Regression Subset Selection |
| LeArEst | Border and Area Estimation of Data Measured with Additive Error |
| LearnBayes | Functions for Learning Bayesian Inference |
| LearnClust | Learning Hierarchical Clustering Algorithms |
| LearnGeom | Learning Plane Geometry |
| learningr | Data and Functions to Accompany the Book "Learning R" |
| LearningRlab | Statistical Learning Functions |
| LearningStats | Elemental Descriptive and Inferential Statistics |
| learningtower | OECD PISA Datasets from 2000-2018 in an Easy-to-Use Format |
| learNN | Examples of Neural Networks |
| LearnPCA | Functions, Data Sets and Vignettes to Aid in Learning Principal Components Analysis (PCA) |
| learnPopGen | Population Genetic Simulations & Numerical Analysis |
| learnr | Interactive Tutorials for R |
| learnrbook | Datasets and Code Examples from P. J. Aphalo's "Learn R" Book |
| leastcostpath | Modelling Pathways and Movement Potential Within a Landscape |
| ledger | Utilities for Importing Data from Plain Text Accounting Files |
| leem | Laboratory of Teaching to Statistics and Mathematics |
| leerSIECyL | Read Data from the SIE |
| lefko3 | Historical and Ahistorical Population Projection Matrix Analysis |
| legco | R Bindings for the Hong Kong Legislative Council API |
| legion | Forecasting Using Multivariate Models |
| legislatoR | Interface to the Comparative Legislators Database |
| LEGIT | Latent Environmental & Genetic InTeraction (LEGIT) Model |
| legocolors | Official Lego Color Palettes |
| lehdr | Grab Longitudinal Employer-Household Dynamics (LEHD) Flat Files |
| leiden | R Implementation of Leiden Clustering Algorithm |
| leidenAlg | Implements the Leiden Algorithm via an R Interface |
| leidenbase | R and C/C++ Wrappers to Run the Leiden find_partition() Function |
| leiv | Bivariate Linear Errors-In-Variables Estimation |
| LeMaRns | Length-Based Multispecies Analysis by Numerical Simulation |
| lemna | Lemna Ecotox Effect Model |
| lemon | Freshing Up your 'ggplot2' Plots |
| lenses | Elegant Data Manipulation with Lenses |
| leontief | Input-Output Analysis |
| leprechaun | Create Simple 'Shiny' Applications as Packages |
| leri | Access Landscape Evaporative Response Index Raster Data |
| lero.lero | Generate 'Lero Lero' Quotes |
| lessR | Less Code, More Results |
| lest | Vectorised Nested if-else Statements Similar to CASE WHEN in 'SQL' |
| lestat | A Package for Learning Statistics |
| letsR | Data Handling and Analysis in Macroecology |
| levitate | Fuzzy String Comparison |
| LexFindR | Find Related Items and Lexical Dimensions in a Lexicon |
| lexicon | Lexicons for Text Analysis |
| lexiconPT | Lexicons for Portuguese Text Analysis |
| LexisNexisTools | Working with Files from 'LexisNexis' |
| LexisPlotR | Plot Lexis Diagrams for Demographic Purposes |
| lexRankr | Extractive Summarization of Text with the LexRank Algorithm |
| lfactors | Factors with Levels |
| LFApp | Shiny Apps for Lateral Flow Assays |
| lfc | Log Fold Change Distribution Tools for Working with Ratios of Counts |
| lfda | Local Fisher Discriminant Analysis |
| LFDR.MLE | Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation |
| LFDR.MME | Estimating Local False Discovery Rates Using the Method of Moments |
| LFDREmpiricalBayes | Estimating Local False Discovery Rates Using Empirical Bayes Methods |
| lfe | Linear Group Fixed Effects |
| lfl | Linguistic Fuzzy Logic |
| lfmm | Latent Factor Mixed Models |
| lg | Locally Gaussian Distributions: Estimation and Methods |
| lgarch | Simulation and Estimation of Log-GARCH Models |
| lgcp | Log-Gaussian Cox Process |
| LGEWIS | Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies |
| lglasso | Longitudinal Graphical Lasso |
| lgpr | Longitudinal Gaussian Process Regression |
| lgr | A Fully Featured Logging Framework |
| lgrdata | Example Datasets for a Learning Guide to R |
| lgrExtra | Extra Appenders for 'lgr' |
| LGRF | Set-Based Tests for Genetic Association in Longitudinal Studies |
| lgtdl | A Set of Methods for Longitudinal Data Objects |
| LHD | Latin Hypercube Designs (LHDs) |
| lhmixr | Fit Sex-Specific Life History Models with Missing Classifications |
| lhs | Latin Hypercube Samples |
| libbib | Various Utilities for Library Science/Assessment and Cataloging |
| libcoin | Linear Test Statistics for Permutation Inference |
| libgeos | Open Source Geometry Engine ('GEOS') C API |
| LiblineaR | Linear Predictive Models Based on the LIBLINEAR C/C++ Library |
| LiblineaR.ACF | Linear Classification with Online Adaptation of Coordinate Frequencies |
| LibOPF | Design of Optimum-Path Forest Classifiers |
| libr | Libraries, Data Dictionaries, and a Data Step for R |
| Libra | Linearized Bregman Algorithms for Generalized Linear Models |
| librarian | Install, Update, Load Packages from CRAN, 'GitHub', and 'Bioconductor' in One Step |
| librarysnapshot | Library Snapshot for Packages and Dependencies in Use by Current Session |
| libsoc | Read, Create and Write 'PharmML' Standard Output (so) XML Files |
| libstableR | Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions |
| LIC | The LIC Criterion for Optimal Subset Selection |
| lidaRtRee | Forest Analysis with Airborne Laser Scanning (LiDAR) Data |
| lidR | Airborne LiDAR Data Manipulation and Visualization for Forestry Applications |
| lifecontingencies | Financial and Actuarial Mathematics for Life Contingencies |
| lifecourse | Quantification of Lifecourse Fluidity |
| lifecycle | Manage the Life Cycle of your Package Functions |
| LifeHist | Life History Models of Individuals |
| LifeInsuranceContracts | Framework for Traditional Life Insurance Contracts |
| lifelogr | Life Logging |
| LifeTables | Two-Parameter HMD Model Life Table System |
| lift | Compute the Top Decile Lift and Plot the Lift Curve |
| liftLRD | Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series |
| liftr | Containerize R Markdown Documents for Continuous Reproducibility |
| lifx | Control 'LIFX' Smart Light Bulbs |
| liger | Lightweight Iterative Geneset Enrichment |
| lightgbm | Light Gradient Boosting Machine |
| LightningR | Tools for Communication with Lightning-Viz Server |
| lightr | Read Spectrometric Data and Metadata |
| lightsout | Implementation of the 'Lights Out' Puzzle Game |
| liGP | Locally Induced Gaussian Process Regression |
| LIHKGr | Scrape Text Data from LIHKG |
| likelihood | Methods for Maximum Likelihood Estimation |
| likelihoodAsy | Functions for Likelihood Asymptotics |
| likelihoodExplore | Likelihood Exploration |
| likelihoodR | Likelihood Analyses for Common Statistical Tests |
| likert | Analysis and Visualization Likert Items |
| lilikoi | Metabolomics Personalized Pathway Analysis Tool |
| lillies | Estimation of Life Years Lost |
| LilRhino | For Implementation of Feed Reduction, Learning Examples, NLP and Code Management |
| LIM | Linear Inverse Model Examples and Solution Methods |
| lime | Local Interpretable Model-Agnostic Explanations |
| liminal | Multivariate Data Visualization with Tours and Embeddings |
| LimnoPalettes | A Limnology Themed Palette Generator |
| limonaid | Working with 'LimeSurvey' Surveys and Responses |
| limorhyde | Differential Analysis of Rhythmic Transcriptome Data |
| limorhyde2 | Quantify Rhythmicity and Differential Rhythmicity in Genomic Data |
| limSolve | Solving Linear Inverse Models |
| lin.eval | Perform Polynomial Evaluation of Linearity |
| linbin | Binning and Plotting of Linearly Referenced Data |
| LinCal | Static Univariate Frequentist and Bayesian Linear Calibration |
| linconGaussR | Sampling Multivariate Normal Distribution under Linear Constraints |
| LindenmayeR | Functions to Explore L-Systems (Lindenmayer Systems) |
| lindia | Automated Linear Regression Diagnostic |
| LindleyPowerSeries | Lindley Power Series Distribution |
| LindleyR | The Lindley Distribution and Its Modifications |
| linea | Linear Regression Interface |
| LinearDetect | Change Point Detection in High-Dimensional Linear Regression Models |
| linearModel | Linear Model Functions |
| linearQ | Linear Algorithm for Simulating Quantiles in Multiscale Change-Point Segmentation Problem |
| LinearRegressionMDE | Minimum Distance Estimation in Linear Regression Model |
| lineartestr | Linear Specification Testing |
| linelist | Tagging and Validating Epidemiological Data |
| linemap | Line Maps |
| linERR | Linear Excess Relative Risk Model |
| lineup | Lining Up Two Sets of Measurements |
| lineup2 | Lining Up Two Sets of Measurements |
| lingglosses | Interlinear Glossed Linguistic Examples and Abbreviation Lists Generation |
| lingmatch | Linguistic Matching and Accommodation |
| lingtypology | Linguistic Typology and Mapping |
| linguisticsdown | Easy Linguistics Document Writing with R Markdown |
| link2GI | Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools |
| Linkage | Clustering Communication Networks Using the Stochastic Topic Block Model Through Linkage.fr |
| LinkageMapView | Plot Linkage Group Maps with Quantitative Trait Loci |
| linkcomm | Tools for Generating, Visualizing, and Analysing Link Communities in Networks |
| LinkedGASP | Linked Emulator of a Coupled System of Simulators |
| LinkedMatrix | Column-Linked and Row-Linked Matrices |
| linkprediction | Link Prediction Methods |
| linkspotter | Bivariate Correlations Calculation and Visualization |
| linl | 'linl' is not 'Letter' |
| linne | Convenient 'CSS' |
| linpk | Generate Concentration-Time Profiles from Linear PK Systems |
| linprog | Linear Programming / Optimization |
| LinRegInteractive | Interactive Interpretation of Linear Regression Models |
| LINselect | Selection of Linear Estimators |
| lintools | Manipulation of Linear Systems of (in)Equalities |
| lintr | A 'Linter' for R Code |
| lipidmapsR | Lipid Maps Rest Service |
| LipidMS | Lipid Annotation for LC-MS/MS DDA or DIA Data |
| lipidomeR | Integrative Visualizations of the Lipidome |
| liqueueR | Implements Queue, PriorityQueue and Stack Classes |
| lira | LInear Regression in Astronomy |
| lisa | Color Palettes from Color Lisa |
| lisrelToR | Import Output from 'LISREL' into 'R' |
| list | Statistical Methods for the Item Count Technique and List Experiment |
| listArray | Incomplete Array with Arbitrary R Objects as Indices |
| listarrays | A Toolbox for Working with R Arrays in a Functional Programming Style |
| listcomp | List Comprehensions |
| listcompr | List Comprehension for R |
| listdown | Create R Markdown from Lists |
| listenv | Environments Behaving (Almost) as Lists |
| LIStest | Tests of independence based on the Longest Increasing Subsequence |
| listr | Tools for Lists |
| listviewer | 'htmlwidget' for Interactive Views of R Lists |
| listWithDefaults | List with Defaults |
| lite | Likelihood-Based Inference for Time Series Extremes |
| liteq | Lightweight Portable Message Queue Using 'SQLite' |
| litRiddle | Dataset and Tools to Research the Riddle of Literary Quality |
| litteR | Litter Analysis |
| littler | R at the Command-Line via 'r' |
| liureg | Liu Regression with Liu Biasing Parameters and Statistics |
| live | Local Interpretable (Model-Agnostic) Visual Explanations |
| livechatR | R Wrapper for LiveChat REST API |
| liver | "Eating the Liver of Data Science" |
| ljr | Logistic Joinpoint Regression |
| LKT | Logistic Knowledge Tracing |
| llama | Leveraging Learning to Automatically Manage Algorithms |
| llbayesireg | The L-Logistic Bayesian Regression |
| LLM | Logit Leaf Model Classifier for Binary Classification |
| llogistic | The L-Logistic Distribution |
| LLSR | Data Analysis of Liquid-Liquid Systems using R |
| lm.beta | Add Standardized Regression Coefficients to lm-Objects |
| lm.br | Linear Model with Breakpoint |
| lmboot | Bootstrap in Linear Models |
| lmDiallel | Linear Fixed Effects Models for Diallel Crosses |
| lmds | Landmark Multi-Dimensional Scaling |
| lme4 | Linear Mixed-Effects Models using 'Eigen' and S4 |
| lmeInfo | Information Matrices for 'lmeStruct' and 'glsStruct' Objects |
| LMERConvenienceFunctions | Model Selection and Post-Hoc Analysis for (G)LMER Models |
| lmeresampler | Bootstrap Methods for Nested Linear Mixed-Effects Models |
| lmerTest | Tests in Linear Mixed Effects Models |
| lmeSplines | Add Smoothing Spline Modelling Capability to 'nlme' |
| LMest | Generalized Latent Markov Models |
| lmf | Functions for Estimation and Inference of Selection in Age-Structured Populations |
| LMfilteR | Filter Methods for Parameter Estimation in Linear and Non Linear Regression Models |
| lmfor | Functions for Forest Biometrics |
| lmForc | Linear Model Forecasting |
| lmls | Gaussian Location-Scale Regression |
| lmm | Linear Mixed Models |
| LMMELSM | Fit Latent Multivariate Mixed Effects Location Scale Models |
| lmmot | Multiple Ordinal Tobit (MOT) Model |
| lmmpar | Parallel Linear Mixed Model |
| LMMsolver | Linear Mixed Model Solver |
| LMMstar | Repeated Measurement Models for Discrete Times |
| LMN | Inference for Linear Models with Nuisance Parameters |
| lmodel2 | Model II Regression |
| LMoFit | Advanced L-Moment Fitting of Distributions |
| lmom | L-Moments |
| lmomco | L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions |
| Lmoments | L-Moments and Quantile Mixtures |
| lmomPi | (Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom' |
| lmomRFA | Regional Frequency Analysis using L-Moments |
| lmPerm | Permutation Tests for Linear Models |
| lmQCM | An Algorithm for Gene Co-Expression Analysis |
| lmreg | Data and Functions Used in Linear Models and Regression with R: An Integrated Approach |
| lmridge | Linear Ridge Regression with Ridge Penalty and Ridge Statistics |
| lmSubsets | Exact Variable-Subset Selection in Linear Regression |
| lmtest | Testing Linear Regression Models |
| lmtp | Non-Parametric Causal Effects of Feasible Interventions Based on Modified Treatment Policies |
| lmvar | Linear Regression with Non-Constant Variances |
| lmviz | A Package to Visualize Linear Models Features and Play with Them |
| lncDIFF | Long Non-Coding RNA Differential Expression Analysis |
| LncFinder | LncRNA Identification and Analysis Using Heterologous Features |
| LncPath | Identifying the Pathways Regulated by LncRNA Sets of Interest |
| LNIRT | LogNormal Response Time Item Response Theory Models |
| lnmCluster | Perform Logistic Normal Multinomial Clustering for Microbiome Compositional Data |
| loa | Lattice Options and Add-Ins |
| loadflux | Explore Intra-Event Suspended Sediment Dynamics |
| loadings | Loadings for Principal Component Analysis and Partial Least Squares |
| loadr | Cleaner Workspaces with Shared Variable Environments |
| loadshaper | Producing Load Shape with Target Peak and Load Factor |
| LoBrA | Generalized Spline Mixed Effect Models for Longitudinal Breath Data |
| lobstr | Visualize R Data Structures with Trees |
| LocalControl | Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence |
| LocalControlStrategy | Local Control Strategy for Robust Analysis of Cross-Sectional Data |
| localFDA | Localization Processes for Functional Data Analysis |
| localgauss | Estimating Local Gaussian Parameters |
| localICE | Local Individual Conditional Expectation |
| localIV | Estimation of Marginal Treatment Effects using Local Instrumental Variables |
| localModel | LIME-Based Explanations with Interpretable Inputs Based on Ceteris Paribus Profiles |
| localScore | Package for Sequence Analysis by Local Score |
| localsolver | R API to LocalSolver |
| locatexec | Detection and Localization of Executable Files |
| locationgamer | Identification of Location Game Equilibria in Networks |
| locfdr | Computes Local False Discovery Rates |
| locfit | Local Regression, Likelihood and Density Estimation |
| locits | Test of Stationarity and Localized Autocovariance |
| Lock5Data | Datasets for "Statistics: UnLocking the Power of Data" |
| Lock5withR | Datasets for 'Statistics: Unlocking the Power of Data' |
| LocKer | Locally Sparse Estimator of Generalized Varying Coefficient Model for Asynchronous Longitudinal Data |
| locpol | Kernel Local Polynomial Regression |
| locpolExpectile | Local Polynomial Expectile Regression |
| locStra | Fast Implementation of (Local) Population Stratification Methods |
| loder | Dependency-Free Access to PNG Image Files |
| lodGWAS | Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection |
| lodi | Limit of Detection Imputation for Single-Pollutant Models |
| lodr | Linear Model Fitting with LOD Covariates |
| loe | Local Ordinal Embedding |
| loewesadditivity | Loewe's Additivity |
| log | Record Events and Issues |
| log4r | A Fast and Lightweight Logging System for R, Based on 'log4j' |
| LOGAN | Log File Analysis in International Large-Scale Assessments |
| LOGANTree | Tree-Based Models for the Analysis of Log Files from Computer-Based Assessments |
| logbin | Relative Risk Regression Using the Log-Binomial Model |
| LogConcDEAD | Log-Concave Density Estimation in Arbitrary Dimensions |
| logconcens | Maximum Likelihood Estimation of a log-Concave Density Based on Censored Data |
| logcondens | Estimate a Log-Concave Probability Density from Iid Observations |
| logcondiscr | Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations |
| logger | A Lightweight, Modern and Flexible Logging Utility |
| logging | R Logging Package |
| loggit | Modern Logging for the R Ecosystem |
| logib | Salary Analysis by the Swiss Federal Office for Gender Equality |
| logiBin | Binning Variables to Use in Logistic Regression |
| logicDT | Identifying Interactions Between Binary Predictors |
| LogicReg | Logic Regression |
| logihist | Combined Graphs for Logistic Regression |
| logistf | Firth's Bias-Reduced Logistic Regression |
| logistic4p | Logistic Regression with Misclassification in Dependent Variables |
| LogisticCurveFitting | Logistic Curve Fitting by Rhodes Method |
| LogisticDx | Diagnostic Tests for Logistic Regression Models |
| logisticPCA | Binary Dimensionality Reduction |
| LogisticRCI | Linear and Logistic Regression-Based Reliable Change Index |
| logisticRR | Adjusted Relative Risk from Logistic Regression |
| logitFD | Functional Principal Components Logistic Regression |
| logitnorm | Functions for the Logitnormal Distribution |
| logitr | Logit Models w/Preference & WTP Space Utility Parameterizations |
| logKDE | Computing Log-Transformed Kernel Density Estimates for Positive Data |
| loglognorm | Double Log Normal Distribution Functions |
| logmult | Log-Multiplicative Models, Including Association Models |
| lognorm | Functions for the Lognormal Distribution |
| logNormReg | log Normal Linear Regression |
| logOfGamma | Natural Logarithms of the Gamma Function for Large Values |
| logr | Creates Log Files |
| LogRegEquiv | Logistic Regression Equivalence |
| logrx | A Logging Utility Focus on Clinical Trial Programming Workflows |
| logspline | Routines for Logspline Density Estimation |
| lokern | Kernel Regression Smoothing with Local or Global Plug-in Bandwidth |
| lolog | Latent Order Logistic Graph Models |
| lolR | Linear Optimal Low-Rank Projection |
| LOMAR | Localization Microscopy Data Analysis |
| lomb | Lomb-Scargle Periodogram |
| long2lstmarray | Longitudinal Dataframes into Arrays for Machine Learning Training |
| LongCART | Recursive Partitioning for Longitudinal Data and Right Censored Data Using Baseline Covariates |
| longCatEDA | Package for Plotting Categorical Longitudinal and Time-Series Data |
| LongDat | A Tool for 'Covariate'-Sensitive Longitudinal Analysis on 'omics' Data |
| longit | High Dimensional Longitudinal Data Analysis Using MCMC |
| longitudinal | Analysis of Multiple Time Course Data |
| longitudinalcascade | Longitudinal Cascade |
| longitudinalData | Longitudinal Data |
| LongituRF | Random Forests for Longitudinal Data |
| longmemo | Statistics for Long-Memory Processes (Book Jan Beran), and Related Functionality |
| LongMemoryTS | Long Memory Time Series |
| longmixr | Longitudinal Consensus Clustering with 'flexmix' |
| longpower | Sample Size Calculations for Longitudinal Data |
| longROC | Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores |
| longRPart2 | Recursive Partitioning of Longitudinal Data |
| longurl | Expand Short 'URLs' |
| loo | Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models |
| lookout | Leave One Out Kernel Density Estimates for Outlier Detection |
| lookup | Functions Similar to VLOOKUP in Excel |
| lookupTable | Look-Up Tables using S4 |
| loon | Interactive Statistical Data Visualization |
| loon.data | Data Used to Illustrate 'Loon' Functionality |
| loon.ggplot | A Grammar of Interactive Graphics |
| loon.shiny | Automatically Create a 'Shiny' App Based on Interactive 'Loon' Widgets |
| loon.tourr | Tour in 'Loon' |
| LoopAnalyst | A Collection of Tools to Conduct Levins' Loop Analysis |
| LoopDetectR | Comprehensive Feedback Loop Detection in ODE Models |
| LoopRig | Integration and Analysis of Chromatin Loop Data |
| LOPART | Labeled Optimal Partitioning |
| lordif | Logistic Ordinal Regression Differential Item Functioning using IRT |
| lorec | LOw Rand and sparsE Covariance matrix estimation |
| lorentz | The Lorentz Transform in Relativistic Physics |
| lorenz | Tools for Deriving Income Inequality Estimates from Grouped Income Data |
| lori | Imputation of High-Dimensional Count Data using Side Information |
| LOST | Missing Morphometric Data Simulation and Estimation |
| LotkasLaw | Runs Lotka's Law which is One of the Special Applications of Zipf's Law |
| lotri | A Simple Way to Specify Symmetric, Block Diagonal Matrices |
| lowmemtkmeans | Low Memory Use Trimmed K-Means |
| lowpassFilter | Lowpass Filtering |
| LowRankQP | Low Rank Quadratic Programming |
| LowWAFOMNX | Low WAFOM Niederreiter-Xing Sequence |
| LowWAFOMSobol | Low WAFOM Sobol Sequence |
| LPBkg | Detecting New Signals under Background Mismodelling |
| lpbrim | LP-BRIM Bipartite Modularity |
| lpc | Lassoed Principal Components for Testing Significance of Features |
| lpcde | Boundary Adaptive Local Polynomial Conditional Density Estimator |
| LPCM | Local Principal Curve Methods |
| lpdensity | Local Polynomial Density Estimation and Inference |
| LPDynR | Land Productivity Dynamics Indicator |
| LPGraph | Nonparametric Smoothing of Laplacian Graph Spectra |
| lphom | Ecological Inference by Linear Programming under Homogeneity |
| lpint | Local Polynomial Estimators of the Intensity Function and Its Derivatives |
| lpirfs | Local Projections Impulse Response Functions |
| LPKsample | LP Nonparametric High Dimensional K-Sample Comparison |
| lpl | Local Partial Likelihood Estimation and Simultaneous Confidence Band |
| LPM | Linear Parametric Models Applied to Hydrological Series |
| lpme | Nonparametric Estimation of Measurement Error Models |
| LPmerge | Merging Linkage Maps by Linear Programming |
| LPower | Calculates Power, Sample Size, or Detectable Effect for Longitudinal Analyses |
| LPRelevance | Relevance-Integrated Statistical Inference Engine |
| lpridge | Local Polynomial (Ridge) Regression |
| LPS | Linear Predictor Score, for Binary Inference from Multiple Continuous Variables |
| LPsmooth | LP Smoothed Inference and Graphics |
| lpSolve | Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs |
| lpSolveAPI | R Interface to 'lp_solve' Version 5.5.2.0 |
| LPWC | Lag Penalized Weighted Correlation for Time Series Clustering |
| LqG | Robust Group Variable Screening Based on Maximum Lq-Likelihood Estimation |
| lqmm | Linear Quantile Mixed Models |
| LRcontrast | Dose Response Signal Detection under Model Uncertainty |
| lrd | A Package for Processing Lexical Response Data |
| LREP | Estimate and Test Exponential vs. Pareto Distributions |
| lrequire | Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars |
| lrgs | Linear Regression by Gibbs Sampling |
| lrmest | Different Types of Estimators to Deal with Multicollinearity |
| LRMF3 | Low Rank Matrix Factorization S3 Objects |
| LRQMM | Fitting Linear Quantile Regression Mixed Models with Relationship Matrix |
| lrstat | Power and Sample Size Calculation for Non-Proportional Hazards |
| LRTesteR | Likelihood Ratio Tests |
| LRTH | A Likelihood Ratio Test Accounting for Genetic Heterogeneity |
| LS2W | Locally Stationary Two-Dimensional Wavelet Process Estimation Scheme |
| LS2Wstat | A Multiscale Test of Spatial Stationarity for LS2W Processes |
| lsa | Latent Semantic Analysis |
| LSAfun | Applied Latent Semantic Analysis (LSA) Functions |
| LSAmitR | Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R' |
| lsasim | Functions to Facilitate the Simulation of Large Scale Assessment Data |
| lsbclust | Least-Squares Bilinear Clustering for Three-Way Data |
| lsbs | Bandwidth Selection for Level Sets and HDR Estimation |
| LSD | Lots of Superior Depictions |
| lsdbc | Locally Scaled Density Based Clustering |
| LSDinterface | Interface Tools for LSD Simulation Results Files |
| LSDsensitivity | Sensitivity Analysis Tools for LSD Simulations |
| LSE | Constrained Least Squares and Generalized QR Factorization |
| lsei | Solving Least Squares or Quadratic Programming Problems under Equality/Inequality Constraints |
| lsirm12pl | Latent Space Item Response Model |
| lsl | Latent Structure Learning |
| lslx | Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood or Least Squares |
| lsm | Estimation of the log Likelihood of the Saturated Model |
| lsmeans | Least-Squares Means |
| LSMonteCarlo | American options pricing with Least Squares Monte Carlo method |
| LSMRealOptions | Value American and Real Options Through LSM Simulation |
| lspartition | Nonparametric Estimation and Inference Procedures using Partitioning-Based Least Squares Regression |
| LSPFP | Lysate and Secretome Peptide Feature Plotter |
| lspline | Linear Splines with Convenient Parametrisations |
| lspls | LS-PLS Models |
| lsplsGlm | Classification using LS-PLS for Logistic Regression |
| lsr | Companion to "Learning Statistics with R" |
| LSRS | Land Surface Remote Sensing |
| lss2 | The Accelerated Failure Time Model to Right Censored Data Based on Least-Squares Principle |
| LST | Land Surface Temperature Retrieval for Landsat 8 |
| LSTS | Locally Stationary Time Series |
| LSVAR | Estimation of Low Rank Plus Sparse Structured Vector Auto-Regressive (VAR) Model |
| LSWPlib | Simulation and Spectral Estimation of Locally Stationary Wavelet Packet Processes |
| LSX | Semisupervised Document Scaling by Word-Embedding Models |
| ltable | Easy to Make (Lazy) Tables |
| LTASR | Functions to Replicate the Center for Disease Control and Prevention's 'LTAS' Software in R |
| ltm | Latent Trait Models under IRT |
| ltmix | Left-Truncated Mixtures of Gamma, Weibull, and Lognormal Distributions |
| ltmle | Longitudinal Targeted Maximum Likelihood Estimation |
| LTPDvar | LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables |
| LTRCforests | Ensemble Methods for Survival Data with Time-Varying Covariates |
| LTRCtrees | Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data |
| ltsa | Linear Time Series Analysis |
| ltsk | Local Time Space Kriging |
| ltsspca | Sparse Principal Component Based on Least Trimmed Squares |
| ltxsparklines | Lightweight Sparklines for a LaTeX Document |
| lubridate | Make Dealing with Dates a Little Easier |
| luca | Likelihood Inference from Case-Control Data under Covariate Assumptions |
| lucas | Package to Download and Create the DB of LUCAS Data Harmonized |
| lucid | Printing Floating Point Numbers in a Human-Friendly Format |
| LUCIDus | Latent Unknown Clustering with Integrated Data |
| ludic | Linkage Using Diagnosis Codes |
| lue | Light Use Efficiency Model to Estimate Biomass and YIELD with and Without Vapour Pressure Deficit |
| lulcc | Land Use Change Modelling in R |
| lumberjack | Track Changes in Data |
| Luminescence | Comprehensive Luminescence Dating Data Analysis |
| lunar | Calculate Lunar Phase & Distance, Seasons and Related Environmental Factors |
| lutz | Look Up Time Zones of Point Coordinates |
| luz | Higher Level 'API' for 'torch' |
| luzlogr | Lightweight Logging for R Scripts |
| lvec | Out of Memory Vectors |
| LVGP | Latent Variable Gaussian Process Modeling with Qualitative and Quantitative Input Variables |
| lvm4net | Latent Variable Models for Networks |
| lvmcomp | Stochastic EM Algorithms for Latent Variable Models with a High-Dimensional Latent Space |
| lvmisc | Veras Miscellaneous |
| lvnet | Latent Variable Network Modeling |
| lvplot | Letter Value 'Boxplots' |
| LW1949 | An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949) |
| LWFBrook90R | Simulate Evapotranspiration and Soil Moisture with the SVAT Model LWF-Brook90 |
| lwgeom | Bindings to Selected 'liblwgeom' Functions for Simple Features |
| lwqs | Lagged Weighted Quantile Sum Regression |
| lxb | Fast LXB File Reader |
| LZeroSpikeInference | Exact Spike Train Inference via L0 Optimization |
| m2b | Movement to Behaviour Inference using Random Forest |
| m2r | Interface to 'Macaulay2' |
| M2SMF | Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis |
| M2SMJF | Multi-Modal Similarity Matrix Joint Factorization |
| m61r | Package About Data Manipulation in Pure Base R |
| MAAPER | Analysis of Alternative Polyadenylation Using 3' End-Linked Reads |
| maat | Multiple Administrations Adaptive Testing |
| mable | Maximum Approximate Bernstein/Beta Likelihood Estimation |
| MABOUST | Multi-Armed Bayesian Ordinal Utility-Based Sequential Trial |
| macc | Mediation Analysis of Causality under Confounding |
| MACER | Molecular Acquisition, Cleaning, and Evaluation in R 'MACER' |
| MachineShop | Machine Learning Models and Tools |
| macleish | Retrieve Data from MacLeish Field Station |
| maclogp | Measures of Uncertainty for Model Selection |
| mactivate | Multiplicative Activation |
| maczic | Mediation Analysis for Count and Zero-Inflated Count Data |
| MAd | Meta-Analysis with Mean Differences |
| mada | Meta-Analysis of Diagnostic Accuracy |
| maddison | The Maddison Project Database |
| madgrad | 'MADGRAD' Method for Stochastic Optimization |
| maditr | Fast Data Aggregation, Modification, and Filtering with Pipes and 'data.table' |
| madness | Automatic Differentiation of Multivariate Operations |
| MADPop | MHC Allele-Based Differencing Between Populations |
| madr | Model Averaged Double Robust Estimation |
| madrat | May All Data be Reproducible and Transparent (MADRaT) * |
| mads | Multi-Analysis Distance Sampling |
| madsim | A Flexible Microarray Data Simulation Model |
| Maeswrap | Wrapper Functions for MAESTRA/MAESPA |
| magclass | Data Class and Tools for Handling Spatial-Temporal Data |
| MAGEE | Mixed Model Association Test for GEne-Environment Interaction |
| magi | MAnifold-Constrained Gaussian Process Inference |
| magic | Create and Investigate Magic Squares |
| magicaxis | Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support |
| magicfor | Magic Functions to Obtain Results from for Loops |
| magick | Advanced Graphics and Image-Processing in R |
| magickGUI | GUI Tools for Interactive Image Processing with 'magick' |
| magicLamp | 'WeMo Switch' Smart Plug Utilities |
| MagmaClustR | Clustering and Prediction using Multi-Task Gaussian Processes with Common Mean |
| magmaR | R-Client for 'Magma' of the 'UCSF Mount Etna Data Library' |
| MAGNAMWAR | A Pipeline for Meta-Genome Wide Association |
| magree | Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers |
| magrittr | A Forward-Pipe Operator for R |
| maGUI | A Graphical User Interface for Microarray Data Analysis and Annotation |
| maic | Matching-Adjusted Indirect Comparison |
| maicChecks | Assessing the Numerical Feasibility for Conducting a Matching-Adjusted Indirect Comparison (MAIC) |
| Sending Email Notifications from R | |
| mailmerge | Mail Merge Using R Markdown Documents and 'gmailr' |
| mailR | A Utility to Send Emails from R |
| mailtoR | Creates a Friendly User Interface for Emails Sending in 'shiny' |
| MainExistingDatasets | Main Existing Human Datasets |
| MAINT.Data | Model and Analyse Interval Data |
| MajKMeans | k-Means Algorithm with a Majorization-Minimization Method |
| makedummies | Create Dummy Variables from Categorical Data |
| MakefileR | Create 'Makefiles' Using R |
| makeFlow | Visualizing Sequential Classifications |
| makemyprior | Intuitive Construction of Joint Priors for Variance Parameters |
| makePalette | Make Palette |
| makepipe | Pipeline Tools Inspired by 'GNU Make' |
| makeProject | Creates an empty package framework for the LCFD format |
| maketools | Exploring and Testing the Toolchain and System Libraries |
| MakeYourPalette | Make Your Palette |
| MAKL | Multiple Approximate Kernel Learning (MAKL) |
| malan | MAle Lineage ANalysis |
| malani | Machine Learning Assisted Network Inference |
| malariaAtlas | An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atlas Project' |
| malaytextr | Text Mining for Bahasa Malaysia |
| MALDIquant | Quantitative Analysis of Mass Spectrometry Data |
| MALDIquantForeign | Import/Export Routines for 'MALDIquant' |
| MALDIrppa | MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis |
| mallet | An R Wrapper for the Java Mallet Topic Modeling Toolkit |
| malvinas | Islas Malvinas, Georgias Del Sur y Sándwich Del Sur |
| MAMS | Designing Multi-Arm Multi-Stage Studies |
| ManagedCloudProvider | Providing the Kubernetes-Like Functions for the Non-Kubernetes Cloud Service |
| managelocalrepo | Manage a CRAN-Style Local Repository |
| MANCIE | Matrix Analysis and Normalization by Concordant Information Enhancement |
| mand | Multivariate Analysis for Neuroimaging Data |
| mandelbrot | Generates Views on the Mandelbrot Set |
| manet | Multiple Allocation Model for Actor-Event Networks |
| mangoTraining | Mango Solutions Training Datasets |
| Mangrove | Risk Prediction on Trees |
| manhattanly | Interactive Q-Q and Manhattan Plots Using 'plotly.js' |
| manhplot | The Manhattan++ Plot |
| manifestoR | Access and Process Data and Documents of the Manifesto Project |
| ManifoldOptim | An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization |
| manipulate | Interactive Plots for RStudio |
| manipulateWidget | Add Even More Interactivity to Interactive Charts |
| ManlyMix | Manly Mixture Modeling and Model-Based Clustering |
| MAnorm2 | Tools for Normalizing and Comparing ChIP-seq Samples |
| MANOVA.RM | Resampling-Based Analysis of Multivariate Data and Repeated Measures Designs |
| manydata | A Portal for Global Governance Data |
| manymodelr | Build and Tune Several Models |
| ManyTests | Multiple Testing Procedures of Cox (2011) and Wong and Cox (2007) |
| MaOEA | Many Objective Evolutionary Algorithm |
| maotai | Tools for Matrix Algebra, Optimization and Inference |
| MAP | Multimodal Automated Phenotyping |
| Map2NCBI | Mapping Markers to the Nearest Genomic Feature |
| MAPA | Multiple Aggregation Prediction Algorithm |
| mapaccuracy | Unbiased Thematic Map Accuracy and Area |
| mapbayr | MAP-Bayesian Estimation of PK Parameters |
| mapboxapi | R Interface to 'Mapbox' Web Services |
| mapboxer | An R Interface to 'Mapbox GL JS' |
| mapcan | Tools for Plotting Canadian Choropleth Maps and Choropleth Alternatives |
| mapchina | China Administrative Divisions Geospatial Shapefile Data |
| mapdata | Extra Map Databases |
| mapdeck | Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl' |
| MapeBay | Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian |
| mapedit | Interactive Editing of Spatial Data in R |
| mapfit | A Tool for PH/MAP Parameter Estimation |
| MapGAM | Mapping Smoothed Effect Estimates from Individual-Level Data |
| mapi | Mapping Averaged Pairwise Information |
| mapiso | Create Contour Polygons from Regular Grids |
| MAPITR | MArginal ePIstasis Test for Regions |
| maple | Bayesian Analysis of Multi-Sample Spatial Transcriptomics Experiments |
| mapme.biodiversity | Efficient Monitoring of Global Biodiversity Portfolios |
| mapmisc | Utilities for Producing Maps |
| mapping | Automatic Download, Linking, Manipulating Coordinates for Maps |
| mappings | Functions for Transforming Categorical Variables |
| mapplots | Data Visualisation on Maps |
| mappoly | Genetic Linkage Maps in Autopolyploids |
| mappp | Map in Parallel with Progress |
| mapproj | Map Projections |
| mapr | Visualize Species Occurrence Data |
| mapReasy | Producing Administrative Boundary Map with Additional Features Embedded |
| maps | Draw Geographical Maps |
| mapsapi | 'sf'-Compatible Interface to 'Google Maps' APIs |
| mapscanner | Print Maps, Draw on Them, Scan Them Back in |
| mapsf | Thematic Cartography |
| mapsFinland | Maps of Finland |
| mapSpain | Administrative Boundaries of Spain |
| mapsPERU | Maps of Peru |
| mapsRinteractive | Local Adaptation and Evaluation of Digital Soil Maps |
| maptiles | Download and Display Map Tiles |
| maptools | Tools for Handling Spatial Objects |
| maptpx | MAP Estimation of Topic Models |
| maptree | Mapping, Pruning, and Graphing Tree Models |
| mapview | Interactive Viewing of Spatial Data in R |
| mAr | Multivariate AutoRegressive Analysis |
| mar1s | Multiplicative AR(1) with Seasonal Processes |
| march | Markov Chains |
| marcher | Migration and Range Change Estimation in R |
| marelac | Tools for Aquatic Sciences |
| MareyMap | Estimation of Meiotic Recombination Rates Using Marey Maps |
| marg | Approximate Marginal Inference for Regression-Scale Models |
| margaret | Scientometric Analysis Minciencias |
| MargCond | Joint Marginal-Conditional Model |
| marginaleffects | Marginal Effects, Marginal Means, Predictions, and Contrasts |
| marginalizedRisk | Estimating Marginalized Risk |
| MarginalMediation | Marginal Mediation |
| margins | Marginal Effects for Model Objects |
| marima | Multivariate ARIMA and ARIMA-X Analysis |
| mark | Miscellaneous, Analytic R Kernels |
| markdown | Render Markdown with the C Library 'Sundown' |
| markdownInput | Shiny Module for a Markdown Input with Result Preview |
| marked | Mark-Recapture Analysis for Survival and Abundance Estimation |
| markerpen | Marker Gene Detection via Penalized Principal Component Analysis |
| MarketMatching | Market Matching and Causal Impact Inference |
| marketr | Tidy Calculation of Marketing Metrics Plus Quick Analysis |
| markets | Estimation Methods for Markets in Equilibrium and Disequilibrium |
| markmyassignment | Automatic Marking of R Assignments |
| markophylo | Markov Chain Models for Phylogenetic Trees |
| markovchain | Easy Handling Discrete Time Markov Chains |
| Markovchart | Markov Chain-Based Cost-Optimal Control Charts |
| markovMSM | Methods for Checking the Markov Condition in Multi-State Survival Data |
| MarkowitzR | Statistical Significance of the Markowitz Portfolio |
| marmap | Import, Plot and Analyze Bathymetric and Topographic Data |
| marp | Model-Averaged Renewal Process |
| marqLevAlg | A Parallelized General-Purpose Optimization Based on Marquardt-Levenberg Algorithm |
| MARSANNhybrid | MARS Based ANN Hybrid Model |
| MARSS | Multivariate Autoregressive State-Space Modeling |
| MARSSVRhybrid | MARS SVR Hybrid |
| maSAE | Mandallaz' Model-Assisted Small Area Estimators |
| mase | Model-Assisted Survey Estimators |
| mashr | Multivariate Adaptive Shrinkage |
| maskRangeR | Mask Species Geographic Ranges |
| mason | Build Data Structures for Common Statistical Analysis |
| MASS | Support Functions and Datasets for Venables and Ripley's MASS |
| masscor | Mass Measurement Corrections |
| MASSExtra | Some 'MASS' Enhancements |
| Massign | Simple Matrix Construction |
| massiveGST | Competitive Gene Sets Test with the Mann-Whitney-Wilcoxon Test |
| MASSTIMATE | Body Mass Estimation Equations for Vertebrates |
| MasterBayes | ML and MCMC Methods for Pedigree Reconstruction and Analysis |
| mastif | Mast Inference and Forecasting |
| MAT | Multidimensional Adaptive Testing |
| MATA | Model-Averaged Tail Area (MATA) Confidence Interval and Distribution |
| matahari | Spy on Your R Session |
| match2C | Match One Sample using Two Criteria |
| matchbook | Wrapper for the 'Matchbook' API |
| Matching | Multivariate and Propensity Score Matching with Balance Optimization |
| matchingMarkets | Analysis of Stable Matchings |
| matchingR | Matching Algorithms in R and C++ |
| MatchIt | Nonparametric Preprocessing for Parametric Causal Inference |
| matchmaker | Flexible Dictionary-Based Cleaning |
| matchMulti | Optimal Multilevel Matching using a Network Algorithm |
| matchr | Pattern Matching and Enumerated Types in R |
| MatchThem | Matching and Weighting Multiply Imputed Datasets |
| matconv | A Code Converter from the Matlab/Octave Language to R |
| materialmodifier | Apply Photo Editing Effects |
| mathjaxr | Using 'Mathjax' in Rd Files |
| mathpix | Support for the 'Mathpix' API (Image to 'LaTeX') |
| matlab | 'MATLAB' Emulation Package |
| matlab2r | Translation Layer from MATLAB to R |
| matlabr | An Interface for MATLAB using System Calls |
| matlib | Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics |
| matman | Material Management |
| MatManlyMix | Matrix Clustering with Gaussian and Manly Mixture Models |
| matpow | Matrix Powers |
| matricks | Useful Tricks for Matrix Manipulation |
| Matrix | Sparse and Dense Matrix Classes and Methods |
| Matrix.utils | Data.frame-Like Operations on Sparse and Dense Matrix Objects |
| matrixcalc | Collection of Functions for Matrix Calculations |
| MatrixCorrelation | Matrix Correlation Coefficients |
| matrixdist | Statistics for Matrix Distributions |
| MatrixEQTL | Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations |
| MatrixExtra | Extra Methods for Sparse Matrices |
| matrixLaplacian | Normalized Laplacian Matrix and Laplacian Map |
| MatrixLDA | Penalized Matrix-Normal Linear Discriminant Analysis |
| MatrixMixtures | Model-Based Clustering via Matrix-Variate Mixture Models |
| MatrixModels | Modelling with Sparse and Dense Matrices |
| matrixNormal | The Matrix Normal Distribution |
| matrixProfile | Matrix Profile |
| matrixprofiler | Matrix Profile for R |
| matrixsampling | Simulations of Matrix Variate Distributions |
| matrixStats | Functions that Apply to Rows and Columns of Matrices (and to Vectors) |
| matrixStrucTest | Tests of Matrix Structure for Construct Validation |
| matrixTests | Fast Statistical Hypothesis Tests on Rows and Columns of Matrices |
| matsbyname | An Implementation of Matrix Mathematics |
| matsindf | Matrices in Data Frames |
| MatSkew | Matrix Skew-T Parameter Estimation |
| matuR | Athlete Maturation and Biobanding |
| mau | Decision Models with Multi Attribute Utility Theory |
| mauricer | Work with 'BEAST2' Packages |
| MAVE | Methods for Dimension Reduction |
| maxcombo | The Group Sequential Max-Combo Test for Comparing Survival Curves |
| MaxentVariableSelection | Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling |
| maximin | Space-Filling Design under Maximin Distance |
| maxLik | Maximum Likelihood Estimation and Related Tools |
| maxlike | Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data |
| maxmatching | Maximum Matching for General Weighted Graph |
| MaxMC | Maximized Monte Carlo |
| maxnet | Fitting 'Maxent' Species Distribution Models with 'glmnet' |
| maxnodf | Approximate Maximisation of Nestedness in Bipartite Graphs |
| MaxPro | Maximum Projection Designs |
| MaxSkew | Orthogonal Data Projections with Maximal Skewness |
| maxstat | Maximally Selected Rank Statistics |
| maybe | The Maybe Monad |
| MazamaCoreUtils | Utility Functions for Production R Code |
| MazamaLocationUtils | Manage Spatial Metadata for Known Locations |
| MazamaRollUtils | Efficient Rolling Functions |
| MazamaSpatialPlots | Thematic Plots for Mazama Spatial Datasets |
| MazamaSpatialUtils | Spatial Data Download and Utility Functions |
| MazamaTimeSeries | Core Functionality for Environmental Time Series |
| mazealls | Generate Recursive Mazes |
| mazeGen | Elithorn Maze Generator |
| mazeinda | Monotonic Association on Zero-Inflated Data |
| mazing | Utilities for Making and Plotting Mazes |
| MBA | Multilevel B-Spline Approximation |
| MBAnalysis | Multiblock Exploratory and Predictive Data Analysis |
| mbbefd | Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling |
| MBC | Multivariate Bias Correction of Climate Model Outputs |
| MBCbook | Companion Package for the Book "Model-Based Clustering and Classification for Data Science" by Bouveyron et al. (2019, ISBN:9781108644181). |
| mbclusterwise | Clusterwise Multiblock Analyses |
| mbend | Matrix Bending |
| MBESS | The MBESS R Package |
| mbest | Moment-Based Estimation for Hierarchical Models |
| MBHdesign | Spatial Designs for Ecological and Environmental Surveys |
| mbir | Magnitude-Based Inferences |
| mblm | Median-Based Linear Models |
| MBmca | Nucleic Acid Melting Curve Analysis |
| mbmixture | Microbiome Mixture Analysis |
| MBNMAdose | Dose-Response MBNMA Models |
| MBNMAtime | Run Time-Course Model-Based Network Meta-Analysis (MBNMA) Models |
| mboost | Model-Based Boosting |
| mboxr | Reading, Extracting, and Converting an Mbox File into a Tibble |
| mbr | Mass Balance Reconstruction |
| mbrdr | Model-Based Response Dimension Reduction |
| mbRes | Integrating Multiple Biomarker Responses in Aquatic Organisms using Effect Size, Statistical Uncertainty, and Ecological Relevance |
| mbrglm | Median Bias Reduction in Binomial-Response GLMs |
| MBSGS | Multivariate Bayesian Sparse Group Selection with Spike and Slab |
| MBSP | Multivariate Bayesian Model with Shrinkage Priors |
| mbsts | Multivariate Bayesian Structural Time Series |
| mBvs | Bayesian Variable Selection Methods for Multivariate Data |
| mc.heterogeneity | A Monte Carlo Based Heterogeneity Test for Meta-Analysis |
| mc2d | Tools for Two-Dimensional Monte-Carlo Simulations |
| MCARtest | Optimal Nonparametric Testing of Missing Completely at Random |
| MCAvariants | Multiple Correspondence Analysis Variants |
| mcb | Model Confidence Bounds |
| MCBackscattering | Monte Carlo Simulation for Surface Backscattering |
| mcBFtest | Monte Carlo Based Tests for the Behrens Fisher Problem as an Alternative to Welch's t-Approximation |
| mcbiopi | Matrix Computation Based Identification of Prime Implicants |
| mcca | Multi-Category Classification Accuracy |
| mccf1 | Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and the Best Threshold |
| mcclust | Process an MCMC Sample of Clusterings |
| mccmeiv | Analysis of Matched Case Control Data with a Mismeasured Exposure that is Accompanied by Instrumental Variables |
| mccr | The Matthews Correlation Coefficient |
| MCDA | Support for the Multicriteria Decision Aiding Process |
| mcemGLM | Maximum Likelihood Estimation for Generalized Linear Mixed Models |
| mcen | Multivariate Cluster Elastic Net |
| mcga | Machine Coded Genetic Algorithms for Real-Valued Optimization Problems |
| mcglm | Multivariate Covariance Generalized Linear Models |
| MChtest | Monte Carlo Hypothesis Tests with Sequential Stopping |
| MCI | Multiplicative Competitive Interaction (MCI) Model |
| MCID | Estimating the Minimal Clinically Important Difference |
| MCL | Markov Cluster Algorithm |
| mclcar | Estimating Conditional Auto-Regressive (CAR) Models using Monte Carlo Likelihood Methods |
| mclogit | Multinomial Logit Models, with or without Random Effects or Overdispersion |
| mclust | Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation |
| mclustAddons | Addons for the 'mclust' Package |
| mclustcomp | Measures for Comparing Clusters |
| MCM | Estimating and Testing Intergenerational Social Mobility Effect |
| mcmc | Markov Chain Monte Carlo |
| MCMC.OTU | Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology |
| MCMC.qpcr | Bayesian Analysis of qRT-PCR Data |
| MCMC4Extremes | Posterior Distribution of Extreme Value Models in R |
| mcmcderive | Derive MCMC Parameters |
| mcmcensemble | Ensemble Sampler for Affine-Invariant MCMC |
| MCMCglmm | MCMC Generalised Linear Mixed Models |
| mcmcOutput | Functions to Store, Manipulate and Display Markov Chain Monte Carlo (MCMC) Output |
| MCMCpack | Markov Chain Monte Carlo (MCMC) Package |
| mcmcplots | Create Plots from MCMC Output |
| MCMCprecision | Precision of Discrete Parameters in Transdimensional MCMC |
| mcmcr | Manipulate MCMC Samples |
| mcmcsae | Markov Chain Monte Carlo Small Area Estimation |
| mcmcse | Monte Carlo Standard Errors for MCMC |
| MCMCtreeR | Prepare MCMCtree Analyses and Plot Bayesian Divergence Time Analyses Estimates on Trees |
| MCMCvis | Tools to Visualize, Manipulate, and Summarize MCMC Output |
| mcMST | A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem |
| mco | Multiple Criteria Optimization Algorithms and Related Functions |
| Mcomp | Data from the M-Competitions |
| mcompanion | Objects and Methods for Multi-Companion Matrices |
| mcount | Marginalized Count Regression Models |
| mcp | Regression with Multiple Change Points |
| MCPAN | Multiple Comparisons Using Normal Approximation |
| mcparallelDo | A Simplified Interface for Running Commands on Parallel Processes |
| MCPMod | Design and Analysis of Dose-Finding Studies |
| MCPModGeneral | A Supplement to the 'DoseFinding' Package for the General Case |
| MCPModPack | Simulation-Based Design and Analysis of Dose-Finding Trials |
| mcprofile | Testing Generalized Linear Hypotheses for Generalized Linear Model Parameters by Profile Deviance |
| MCPtests | Multiples Comparisons Procedures |
| mcr | Method Comparison Regression |
| mcreplicate | Multi-Core Replicate |
| MCS | Model Confidence Set Procedure |
| MCSim | Determine the Optimal Number of Clusters |
| mcStats | Visualize Results of Statistical Hypothesis Tests |
| mctest | Multicollinearity Diagnostic Measures |
| MCTM | Markov Chains Transition Matrices |
| mctq | Tools to Process the Munich ChronoType Questionnaire (MCTQ) |
| mcunit | Unit Tests for MC Methods |
| mcvis | Multi-Collinearity Visualization |
| mcwr | Markov Chains with Rewards |
| md | Selecting Bandwidth for Kernel Density Estimator with Minimum Distance Method |
| md.log | Produces Markdown Log File with a Built-in Function Call |
| mda | Mixture and Flexible Discriminant Analysis |
| mDAG | Inferring Causal Network from Mixed Observational Data Using a Directed Acyclic Graph |
| mdapack | Medical Data Analysis Pack |
| mdatools | Multivariate Data Analysis for Chemometrics |
| MDBED | Moran-Downton Bivariate Exponential Distribution |
| mdbr | Work with Microsoft Access Files |
| mde | Missing Data Explorer |
| mded | Measuring the Difference Between Two Empirical Distributions |
| mdendro | Extended Agglomerative Hierarchical Clustering |
| MDFS | MultiDimensional Feature Selection |
| mdftracks | Read and Write 'MTrackJ Data Files' |
| mdgc | Missing Data Imputation Using Gaussian Copulas |
| mdhglm | Multivariate Double Hierarchical Generalized Linear Models |
| MDimNormn | Multi-Dimensional MA Normalization for Plate Effect |
| mdir.logrank | Multiple-Direction Logrank Test |
| MDMAPR | Molecular Detection Mapping and Analysis Platform |
| mdmb | Model Based Treatment of Missing Data |
| MDMR | Multivariate Distance Matrix Regression |
| MDOLS | Inference of Quadratic Functional for Moderate-Dimensional OLS |
| mdpeer | Graph-Constrained Regression with Enhanced Regularization Parameters Selection |
| MDplot | Visualising Molecular Dynamics Analyses |
| MDPtoolbox | Markov Decision Processes Toolbox |
| mds | Medical Devices Surveillance |
| mdscore | Improved Score Tests for Generalized Linear Models |
| mdsdt | Functions for Analysis of Data with General Recognition Theory |
| MDSGUI | A GUI for interactive MDS in R |
| MDSMap | High Density Genetic Linkage Mapping using Multidimensional Scaling |
| mdsOpt | Searching for Optimal MDS Procedure for Metric and Interval-Valued Data |
| MDSPCAShiny | Interactive Document for Working with Multidimensional Scaling and Principal Component Analysis |
| MDSS | Modeling Human Dentin Serial Sectioning |
| mdthemes | Markdown Themes for 'ggplot2' |
| mdw | Maximum Diversity Weighting |
| meanr | Sentiment Analysis Scorer |
| meanShiftR | A Computationally Efficient Mean Shift Implementation |
| meantables | Make Quick Descriptive Tables for Continuous Variables |
| measurementProtocol | Send Data from R to the Measurement Protocol |
| measurements | Tools for Units of Measurement |
| measures | Performance Measures for Statistical Learning |
| measuRing | Detection and Control of Tree-Ring Widths on Scanned Image Sections |
| meboot | Maximum Entropy Bootstrap for Time Series |
| MEclustnet | Fit the Mixture of Experts Latent Position Cluster Model to Network Data |
| mecor | Measurement Error Correction in Linear Models with a Continuous Outcome |
| MED | Mediation by Tilted Balancing |
| MedDietCalc | Multi Calculator to Compute Scores of Adherence to Mediterranean Diet |
| mederrRank | Bayesian Methods for Identifying the Most Harmful Medication Errors |
| medExtractR | Extraction of Medication Information from Clinical Text |
| medfate | Mediterranean Forest Simulation |
| medflex | Flexible Mediation Analysis Using Natural Effect Models |
| mediacloudr | Wrapper for the 'mediacloud.org' API |
| MediaK | Calculate MeDiA_K Distance |
| Mediana | Clinical Trial Simulations |
| MediaNews | Media News Extraction for Text Analysis |
| mediateP | Mediation Analysis Based on the Product Method |
| mediation | Causal Mediation Analysis |
| mediationsens | Simulation-Based Sensitivity Analysis for Causal Mediation Studies |
| medicaldata | Data Package for Medical Datasets |
| medicalrisk | Medical Risk and Comorbidity Tools for ICD-9-CM Data |
| medicare | Tools for Obtaining and Cleaning Medicare Public Use Files |
| meditate | Meditation Timer |
| meditations | Prints a Random Quote from Marcus Aurelius' Book Meditations |
| MEDITS | Analysis of MEDITS-Like Survey Data |
| MedLEA | Morphological and Structural Features of Medicinal Leaves |
| medrxivr | Access and Search MedRxiv and BioRxiv Preprint Data |
| MEDseq | Mixtures of Exponential-Distance Models with Covariates |
| MedSurvey | Linear Mediation Analysis for Complex Surveys Using Balanced Repeated Replication |
| meerva | Analysis of Data with Measurement Error Using a Validation Subsample |
| meetupapi | Access 'Meetup' API |
| mefa | Multivariate Data Handling in Ecology and Biogeography |
| mefa4 | Multivariate Data Handling with S4 Classes and Sparse Matrices |
| Mega2R | Accessing and Processing a 'Mega2' Genetic Database |
| MEGENA | Multiscale Clustering of Geometrical Network |
| meifly | Interactive Model Exploration using 'GGobi' |
| mekko | Variable Width Bar Charts: Bar Mekko |
| melt | Multiple Empirical Likelihood Tests |
| meltr | Read Non-Rectangular Text Data |
| meltt | Matching Event Data by Location, Time and Type |
| mem | The Moving Epidemic Method |
| memapp | The Moving Epidemic Method Web Application |
| meme | Create Meme |
| memery | Internet Memes for Data Analysts |
| memgene | Spatial Pattern Detection in Genetic Distance Data Using Moran's Eigenvector Maps |
| memify | Constructing Functions That Keep State |
| memisc | Management of Survey Data and Presentation of Analysis Results |
| memo | In-Memory Caching of Repeated Computations (Memoization) |
| memochange | Testing for Structural Breaks under Long Memory and Testing for Changes in Persistence |
| memofunc | Function Memoization |
| memoiR | R Markdown and Bookdown Templates to Publish Documents |
| memoise | 'Memoisation' of Functions |
| memor | A 'rmarkdown' Template that Can be Highly Customized |
| memoria | Quantifying Ecological Memory in Palaeoecological Datasets and Other Long Time-Series |
| MEMSS | Data Sets from Mixed-Effects Models in S |
| memuse | Memory Estimation Utilities |
| MendelianRandomization | Mendelian Randomization Package |
| MEPDF | Creation of Empirical Density Functions Based on Multivariate Data |
| Mercator | Clustering and Visualizing Distance Matrices |
| merDeriv | Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models |
| mergedblocks | Merged Block Randomization |
| mergeTrees | Aggregating Trees |
| merlin | Mixed Effects Regression for Linear, Non-Linear and User-Defined Models |
| MERO | Performing Monte Carlo Expectation Maximization Random Forest Imputation for Biological Data |
| merror | Accuracy and Precision of Measurements |
| merTools | Tools for Analyzing Mixed Effect Regression Models |
| meshed | Bayesian Regression with Meshed Gaussian Processes |
| MeshesOperations | Operations on 3D Meshes |
| MESS | Miscellaneous Esoteric Statistical Scripts |
| messaging | Conveniently Issue Messages, Warnings, and Errors |
| messydates | A Flexible Class for Messy Dates |
| meta | General Package for Meta-Analysis |
| meta.shrinkage | Meta-Analyses for Simultaneously Estimating Individual Means |
| meta4diag | Meta-Analysis for Diagnostic Test Studies |
| MetaAnalyser | An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine |
| metaBLUE | BLUE for Combining Location and Scale Information in a Meta-Analysis |
| metaBMA | Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis |
| metaboData | Example Metabolomics Data Sets |
| MetabolAnalyze | Probabilistic Latent Variable Models for Metabolomic Data |
| metabolic | Datasets and Functions for Reproducing Meta-Analyses |
| MetabolicSurv | A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature |
| metabolighteR | Interface to the 'Metabolights' REST API |
| MetabolomicsBasics | Basic Functions to Investigate Metabolomics Data Matrices |
| metabolomicsR | Tools for Metabolomics Data |
| MetaboQC | Normalize Metabolomic Data using QC Signal |
| metacart | Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis |
| metaCluster | Metagenomic Clustering |
| metacoder | Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data |
| metacom | Analysis of the 'Elements of Metacommunity Structure' |
| MetaComp | EDGE Taxonomy Assignments Visualization |
| metaconfoundr | Visualize 'Confounder' Control in Meta-Analyses |
| metacor | Meta-Analysis of Correlation Coefficients |
| metacore | A Centralized Metadata Object Focus on Clinical Trial Data Programming Workflows |
| MetaculR | Analyze Metaculus Predictions and Questions |
| MetaCycle | Evaluate Periodicity in Large Scale Data |
| metadat | Meta-Analysis Datasets |
| metaDigitise | Extract and Summarise Data from Published Figures |
| metadynminer | Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed' |
| metadynminer3d | Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files from 'Plumed' |
| metaEnsembleR | Automated Intuitive Package for Meta-Ensemble Learning |
| metafolio | Metapopulation Simulations for Conserving Salmon Through Portfolio Optimization |
| metafor | Meta-Analysis Package for R |
| metaforest | Exploring Heterogeneity in Meta-Analysis using Random Forests |
| metafuse | Fused Lasso Approach in Regression Coefficient Clustering |
| metagam | Meta-Analysis of Generalized Additive Models |
| metagear | Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis |
| metaggR | Calculate the Knowledge-Weighted Estimate |
| MetaheuristicFPA | An Implementation of Flower Pollination Algorithm in R |
| metaheuristicOpt | Metaheuristic for Optimization |
| MetaIntegration | Ensemble Meta-Prediction Framework |
| MetaIntegrator | Meta-Analysis of Gene Expression Data |
| metajam | Easily Download Data and Metadata from 'DataONE' |
| MetaLandSim | Landscape and Range Expansion Simulation |
| metaLik | Likelihood Inference in Meta-Analysis and Meta-Regression Models |
| MetaLonDA | Metagenomics Longitudinal Differential Abundance Method |
| MetAlyzer | Read and Analyze 'MetIDQ™' Software Output Files |
| metaMA | Meta-Analysis for MicroArrays |
| metamedian | Meta-Analysis of Medians |
| metamer | Create Data with Identical Statistics |
| metamicrobiomeR | Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects |
| metamisc | Meta-Analysis of Diagnosis and Prognosis Research Studies |
| metaMix | Bayesian Mixture Analysis for Metagenomic Community Profiling |
| metan | Multi Environment Trials Analysis |
| metansue | Meta-Analysis of Studies with Non-Statistically Significant Unreported Effects |
| metap | Meta-Analysis of Significance Values |
| metapack | Bayesian Meta-Analysis and Network Meta-Analysis |
| metaplot | Data-Driven Plot Design |
| metaplus | Robust Meta-Analysis and Meta-Regression |
| metapost | Interface to 'MetaPost' |
| metapower | Power Analysis for Meta-Analysis |
| metaprotr | Metaproteomics Post-Processing Analysis |
| metarep | Replicability-Analysis Tools for Meta-Analysis |
| metaRMST | Meta-Analysis of RMSTD |
| metaRNASeq | Meta-Analysis of RNA-Seq Data |
| metaSDTreg | Regression Models for Meta Signal Detection Theory |
| metaSEM | Meta-Analysis using Structural Equation Modeling |
| metasens | Statistical Methods for Sensitivity Analysis in Meta-Analysis |
| MetaSKAT | Meta Analysis for SNP-Set (Sequence) Kernel Association Test |
| MetaStan | Bayesian Meta-Analysis via 'Stan' |
| MetaSubtract | Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results |
| metaSurvival | Meta-Analysis of a Single Survival Curve |
| metatest | Fit and Test Metaregression Models |
| metathis | HTML Metadata Tags for 'R Markdown' and 'Shiny' |
| metatools | Enable the Use of 'metacore' to Help Create and Check Dataset |
| metaumbrella | Umbrella Review Package for R |
| MetaUtility | Utility Functions for Conducting and Interpreting Meta-Analyses |
| metavcov | Computing Variances and Covariances, Visualization and Missing Data Solution for Multivariate Meta-Analysis |
| metaviz | Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis |
| metawho | Meta-Analytical Implementation to Identify Who Benefits Most from Treatments |
| MetBrewer | Color Palettes Inspired by Works at the Metropolitan Museum of Art |
| meteo | Spatio-Temporal Analysis and Mapping of Meteorological Observations |
| meteoForecast | Numerical Weather Predictions |
| meteoland | Landscape Meteorology Tools |
| meteor | Meteorological Data Manipulation |
| meteorits | Mixture-of-Experts Modeling for Complex Non-Normal Distributions |
| meteospain | Access to Spanish Meteorological Stations Services |
| meteR | Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE) |
| MEtest | A Homogeneity Test under the Presence of Measurement Errors |
| MetGen | Stochastic Weather Generator |
| MethComp | Analysis of Agreement in Method Comparison Studies |
| methcon5 | Identify and Rank CpG DNA Methylation Conservation Along the Human Genome |
| MethodCompare | Bias and Precision Plots |
| MethylCapSig | Detection of Differentially Methylated Regions using MethylCap-Seq Data |
| MeTo | Meteorological Tools |
| metools | Macroeconomics Tools |
| MetProc | Separate Metabolites into Likely Measurement Artifacts and True Metabolites |
| metR | Tools for Easier Analysis of Meteorological Fields |
| metrica | Prediction Performance Metrics |
| Metrics | Evaluation Metrics for Machine Learning |
| metricsgraphics | Create Interactive Charts with the JavaScript 'MetricsGraphics' Library |
| MetricsWeighted | Weighted Metrics, Scoring Functions and Performance Measures for Machine Learning |
| metrix | Water Quality Metrics Calculator |
| metro | Washington Metropolitan Area Transit Authority API |
| metRology | Support for Metrological Applications |
| metropolis | The Metropolis Algorithm |
| mets | Analysis of Multivariate Event Times |
| MetSizeR | A Shiny App for Sample Size Estimation in Metabolomic Experiments |
| metsyn | Interface with the Meteo France Synop Data API |
| mev | Modelling of Extreme Values |
| mewAvg | A Fixed Memeory Moving Expanding Window Average |
| mexhaz | Mixed Effect Excess Hazard Models |
| mexicolors | Mexican Politics-Inspired Color Palette Generator |
| mExplorer | Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data |
| mfaces | Fast Covariance Estimation for Multivariate Sparse Functional Data |
| MFAg | Multiple Factor Analysis (MFA) |
| mFD | Compute and Illustrate the Multiple Facets of Functional Diversity |
| mfdb | MareFrame DB Querying Library |
| MFDFA | MultiFractal Detrended Fluctuation Analysis |
| mfe | Meta-Feature Extractor |
| mfGARCH | Mixed-Frequency GARCH Models |
| mFilter | Miscellaneous Time Series Filters |
| mFLICA | Leadership-Inference Framework for Multivariate Time Series |
| MFO | Maximal Fat Oxidation and Kinetics Calculation |
| mfp | Multivariable Fractional Polynomials |
| MFPCA | Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains |
| MFSIS | Moder-Free Sure Independent Screening Procedures |
| MFT | The Multiple Filter Test for Change Point Detection |
| MfUSampler | Multivariate-from-Univariate (MfU) MCMC Sampler |
| mfx | Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs |
| mgarchBEKK | Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR) Processes |
| MGBT | Multiple Grubbs-Beck Low-Outlier Test |
| mgc | Multiscale Graph Correlation |
| mgcv | Mixed GAM Computation Vehicle with Automatic Smoothness Estimation |
| mgcViz | Visualisations for Generalized Additive Models |
| MGDrivE | Mosquito Gene Drive Explorer |
| MGDrivE2 | Mosquito Gene Drive Explorer 2 |
| mgee2 | Marginal Analysis of Misclassified Longitudinal Ordinal Data |
| mggd | Multivariate Generalised Gaussian Distribution; Kullback-Leibler Divergence |
| MGL | Module Graphical Lasso |
| MGLM | Multivariate Response Generalized Linear Models |
| mglmn | Model Averaging for Multivariate GLM with Null Models |
| mgm | Estimating Time-Varying k-Order Mixed Graphical Models |
| MGMM | Missingness Aware Gaussian Mixture Models |
| MGMS2 | 'MGMS2' for Polymicrobial Samples |
| MGSDA | Multi-Group Sparse Discriminant Analysis |
| mgss | A Matrix-Free Multigrid Preconditioner for Spline Smoothing |
| mgsub | Safe, Multiple, Simultaneous String Substitution |
| mgwrsar | GWR and MGWR with Spatial Autocorrelation |
| mhazard | Nonparametric and Semiparametric Methods for Multivariate Failure Time Data |
| mhcnuggetsr | Call MHCnuggets |
| MHCtools | Analysis of MHC Data in Non-Model Species |
| MHDA | Massive Hierarchically Data Analysis |
| mHG | Minimum-Hypergeometric Test |
| MHMM | Finite Mixture of Hidden Markov Model |
| mHMMbayes | Multilevel Hidden Markov Models Using Bayesian Estimation |
| mhsmm | Inference for Hidden Markov and Semi-Markov Models |
| mhtboot | Multiple Hypothesis Test Based on Distribution of p Values |
| MHTdiscrete | Multiple Hypotheses Testing for Discrete Data |
| MHTmult | Multiple Hypotheses Testing for Multiple Families/Groups Structure |
| MHTrajectoryR | Bayesian Model Selection in Logistic Regression for the Detection of Adverse Drug Reactions |
| mhurdle | Multiple Hurdle Tobit Models |
| mi | Missing Data Imputation and Model Checking |
| mi4p | Multiple Imputation for Proteomics |
| MIAmaxent | A Modular, Integrated Approach to Maximum Entropy Distribution Modeling |
| micar | 'Mica' Data Web Portal Client |
| mice | Multivariate Imputation by Chained Equations |
| miceadds | Some Additional Multiple Imputation Functions, Especially for 'mice' |
| miceafter | Data and Statistical Analyses after Multiple Imputation |
| micEcon | Microeconomic Analysis and Modelling |
| micEconAids | Demand Analysis with the Almost Ideal Demand System (AIDS) |
| micEconCES | Analysis with the Constant Elasticity of Substitution (CES) Function |
| micEconIndex | Price and Quantity Indices |
| micEconSNQP | Symmetric Normalized Quadratic Profit Function |
| miceFast | Fast Imputations Using 'Rcpp' and 'Armadillo' |
| micemd | Multiple Imputation by Chained Equations with Multilevel Data |
| miceRanger | Multiple Imputation by Chained Equations with Random Forests |
| michelRodange | The Works (in Luxembourguish) of Michel Rodange |
| miclust | Multiple Imputation in Cluster Analysis |
| micompr | Multivariate Independent Comparison of Observations |
| miCoPTCM | Promotion Time Cure Model with Mis-Measured Covariates |
| microbats | An Implementation of Bat Algorithm in R |
| microbenchmark | Accurate Timing Functions |
| microbial | Do 16s Data Analysis and Generate Figures |
| MicrobiomeStat | Statistical Methods for Microbiome Compositional Data |
| microclass | Methods for Taxonomic Classification of Prokaryotes |
| microcontax | The ConTax Data Package |
| MicroDatosEs | Utilities for Official Spanish Microdata |
| microdemic | 'Microsoft Academic' API Client |
| microeco | Microbial Community Ecology Data Analysis |
| microhaplot | Microhaplotype Constructor and Visualizer |
| MicroMacroMultilevel | Micro-Macro Multilevel Modeling |
| micromap | Linked Micromap Plots |
| micromapST | Linked Micromap Plots for U. S. and Other Geographic Areas |
| MicroMoB | Discrete Time Simulation of Mosquito-Borne Pathogen Transmission |
| MicroNiche | Microbial Niche Measurements |
| micropan | Microbial Pan-Genome Analysis |
| microplot | Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel' |
| microPop | Process-Based Modelling of Microbial Populations |
| microsamplingDesign | Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis |
| microseq | Basic Biological Sequence Handling |
| microservices | Breakdown a Monolithic Application to a Suite of Services |
| microsimulation | Discrete Event Simulation in R and C++, with Tools for Cost-Effectiveness Analysis |
| Microsoft365R | Interface to the 'Microsoft 365' Suite of Cloud Services |
| microSTASIS | Microbiota STability ASsessment via Iterative cluStering |
| microsynth | Synthetic Control Methods with Micro- And Meso-Level Data |
| MicSim | Performing Continuous-Time Microsimulation |
| MICsplines | The Computing of Monotonic Spline Bases and Constrained Least-Squares Estimates |
| MiDA | Microarray Data Analysis |
| midas | Turn HTML 'Shiny' |
| midas2 | Bayesian Drug-Combination Platform Design(MIDAS-2) |
| midasml | Estimation and Prediction Methods for High-Dimensional Mixed Frequency Time Series Data |
| midasr | Mixed Data Sampling Regression |
| midastouch | Multiple Imputation by Distance Aided Donor Selection |
| MIDASwrappeR | Microcluster-Based Detector of Anomalies in Edge Streams |
| MIDN | Nearly Exact Sample Size Calculation for Exact Powerful Nonrandomized Tests for Differences Between Binomial Proportions |
| midrangeMCP | Multiples Comparisons Procedures Based on Studentized Midrange and Range Distributions |
| mifa | Multiple Imputation for Exploratory Factor Analysis |
| migest | Methods for the Indirect Estimation of Bilateral Migration |
| migraph | Tools for Multimodal Network Analysis |
| migrate | Create Credit State Migration (Transition) Matrices |
| migration.indices | Migration Indices |
| migui | Graphical User Interface to the 'mi' Package |
| miic | Learning Causal or Non-Causal Graphical Models Using Information Theory |
| MIIPW | IPW and Mean Score Methods for Time-Course Missing Data |
| MIIVsem | Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models |
| mikropml | User-Friendly R Package for Supervised Machine Learning Pipelines |
| mildsvm | Multiple-Instance Learning with Support Vector Machines |
| miLineage | Association Tests for Microbial Lineages on a Taxonomic Tree |
| milorGWAS | Mixed Logistic Regression for Genome-Wide Analysis Studies (GWAS) |
| milr | Multiple-Instance Logistic Regression with LASSO Penalty |
| mime | Map Filenames to MIME Types |
| mimi | Main Effects and Interactions in Mixed and Incomplete Data |
| MiMIR | Metabolomics-Based Models for Imputing Risk |
| MIMSunit | Algorithm to Compute Monitor Independent Movement Summary Unit (MIMS-Unit) |
| mimsy | Calculate MIMS Dissolved Gas Concentrations Without Getting a Headache |
| MinBAR | Determining the Minimal Background Area for Species Distribution Models |
| mind | Multivariate Model Based Inference for Domains |
| MindOnStats | Data sets included in Utts and Heckard's Mind on Statistics |
| mindr | Generate Mind Maps with R |
| mineCitrus | Extract and Analyze Median Molecule Intensity from 'citrus' Output |
| mined | Minimum Energy Designs |
| MinEDfind | A Bayesian Design for Minimum Effective Dosing-Finding Trial |
| minerva | Maximal Information-Based Nonparametric Exploration for Variable Analysis |
| miniCRAN | Create a Mini Version of CRAN Containing Only Selected Packages |
| minidown | Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks |
| miniGUI | Tcl/Tk Quick and Simple Function GUI |
| minimalRSD | Minimally Changed CCD and BBD |
| minimap | Create Tile Grid Maps |
| minimax | The Minimax Distribution Family |
| minimaxdesign | Minimax and Minimax Projection Designs |
| miniMeta | Web Application to Run Meta-Analyses |
| minimist | Parse Argument Options |
| Minirand | Minimization Randomization |
| miniUI | Shiny UI Widgets for Small Screens |
| minMSE | Implementation of the minMSE Treatment Assignment Method for One or Multiple Treatment Groups |
| minpack.lm | R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds |
| minqa | Derivative-free optimization algorithms by quadratic approximation |
| minque | Various Linear Mixed Model Analyses |
| minSNPs | Resolution-Optimised SNPs Searcher |
| MINTplates | Encode "License-Plates" from Sequences and Decode Them Back |
| minval | MINimal VALidation for Stoichiometric Reactions |
| mipfp | Multidimensional Iterative Proportional Fitting and Alternative Models |
| mipplot | An Open-Source Tool for Visualization of Climate Mitigation Scenarios |
| mirai | Minimalist Async Evaluation Framework for R |
| miRecSurv | Left-Censored Recurrent Events Survival Models |
| MIRES | Measurement Invariance Assessment Using Random Effects Models and Shrinkage |
| miRetrieve | miRNA Text Mining in Abstracts |
| MiRKAT | Microbiome Regression-Based Analysis Tests |
| MiRNAQCD | Micro-RNA Quality Control and Diagnosis |
| miRNAss | Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples |
| MiRSEA | 'MicroRNA' Set Enrichment Analysis |
| mirt | Multidimensional Item Response Theory |
| mirtCAT | Computerized Adaptive Testing with Multidimensional Item Response Theory |
| miRtest | Combined miRNA- And mRNA-Testing |
| mirtjml | Joint Maximum Likelihood Estimation for High-Dimensional Item Factor Analysis |
| mirtsvd | SVD-Based Estimation for Exploratory Item Factor Analysis |
| misaem | Linear Regression and Logistic Regression with Missing Covariates |
| misc3d | Miscellaneous 3D Plots |
| miscF | Miscellaneous Functions |
| miscFuncs | Miscellaneous Useful Functions Including LaTeX Tables, Kalman Filtering and Development Tools |
| miscIC | Misclassified Interval Censored Time-to-Event Data |
| misclassGLM | Computation of Generalized Linear Models with Misclassified Covariates Using Side Information |
| miscor | Miscellaneous Functions for the Correlation Coefficient |
| miscset | Miscellaneous Tools Set |
| miscTools | Miscellaneous Tools and Utilities |
| mise | Clears the Workspace (Mise en Place) |
| miselect | Variable Selection for Multiply Imputed Data |
| mispitools | Missing Person Identification Tools |
| mispr | Multiple Imputation with Sequential Penalized Regression |
| misPRIME | Partial Replacement Imputation Estimation for Missing Covariates |
| MiSPU | Microbiome Based Sum of Powered Score (MiSPU) Tests |
| MisRepARMA | Misreported Time Series Analysis |
| misreport | Statistical Analysis of Misreporting on Sensitive Survey Questions |
| missCompare | Intuitive Missing Data Imputation Framework |
| missDeaths | Simulating and Analyzing Time to Event Data in the Presence of Population Mortality |
| missDiag | Comparing Observed and Imputed Values under MAR and MCAR |
| missForest | Nonparametric Missing Value Imputation using Random Forest |
| missingHE | Missing Outcome Data in Health Economic Evaluation |
| MissingPlotLSD | Missing Plot in LSD |
| MissingPlotRBD | Missing Plot in RBD |
| missMDA | Handling Missing Values with Multivariate Data Analysis |
| missMethods | Methods for Missing Data |
| Missplot | Missing Plot Technique in Design of Experiment |
| missRanger | Fast Imputation of Missing Values |
| missSBM | Handling Missing Data in Stochastic Block Models |
| missSOM | Self-Organizing Maps with Built-in Missing Data Imputation |
| mistat | Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti |
| mistr | Mixture and Composite Distributions |
| mistral | Methods in Structural Reliability |
| misty | Miscellaneous Functions 'T. Yanagida' |
| mitml | Tools for Multiple Imputation in Multilevel Modeling |
| MitoHEAR | Quantification of Mitochondrial DNA Heteroplasmy |
| mitools | Tools for Multiple Imputation of Missing Data |
| mitre | Cybersecurity MITRE Standards Data and Digraphs |
| MittagLeffleR | Mittag-Leffler Family of Distributions |
| MIWilson | Implementing the MI-Wilson Confidence Interval |
| miWQS | Multiple Imputation Using Weighted Quantile Sum Regression |
| mix | Estimation/Multiple Imputation for Mixed Categorical and Continuous Data |
| mixAK | Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering |
| MixAll | Clustering and Classification using Model-Based Mixture Models |
| mixAR | Mixture Autoregressive Models |
| mixcat | Mixed Effects Cumulative Link and Logistic Regression Models |
| mixchar | Mixture Model for the Deconvolution of Thermal Decay Curves |
| mixComp | Estimation of Order of Mixture Distributions |
| mixcure | Mixture Cure Models |
| mixdir | Cluster High Dimensional Categorical Datasets |
| mixdist | Finite Mixture Distribution Models |
| mixedCCA | Sparse Canonical Correlation Analysis for High-Dimensional Mixed Data |
| mixedClust | Co-Clustering of Mixed Type Data |
| MixedIndTests | Tests of Randomness and Tests of Independence |
| mixedMem | Tools for Discrete Multivariate Mixed Membership Models |
| MixedPoisson | Mixed Poisson Models |
| MixedPsy | Statistical Tools for the Analysis of Psychophysical Data |
| mixedsde | Estimation Methods for Stochastic Differential Mixed Effects Models |
| MixedTS | Mixed Tempered Stable Distribution |
| mixEMM | A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable Missing Data |
| mixexp | Design and Analysis of Mixture Experiments |
| MIXFIM | Evaluation of the FIM in NLMEMs using MCMC |
| MixfMRI | Mixture fMRI Clustering Analysis |
| mixgb | Multiple Imputation Through 'XGBoost' |
| MixGHD | Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions |
| mixIndependR | Genetics and Independence Testing of Mixed Genetic Panels |
| mixKernel | Omics Data Integration Using Kernel Methods |
| mixl | Simulated Maximum Likelihood Estimation of Mixed Logit Models for Large Datasets |
| mixlm | Mixed Model ANOVA and Statistics for Education |
| MixMAP | Implements the MixMAP Algorithm |
| MixMatrix | Classification with Matrix Variate Normal and t Distributions |
| mixmeta | An Extended Mixed-Effects Framework for Meta-Analysis |
| MixOptim | Mixture Optimization Algorithm |
| mixPHM | Mixtures of Proportional Hazard Models |
| mixpoissonreg | Mixed Poisson Regression for Overdispersed Count Data |
| mixR | Finite Mixture Modeling for Raw and Binned Data |
| mixRaschTools | Plotting and Average Theta Functions for Multiple Class Mixed Rasch Models |
| mixreg | Functions to Fit Mixtures of Regressions |
| MixRF | A Random-Forest-Based Approach for Imputing Clustered Incomplete Data |
| MixSAL | Mixtures of Multivariate Shifted Asymmetric Laplace (SAL) Distributions |
| MixSIAR | Bayesian Mixing Models in R |
| MixSim | Simulating Data to Study Performance of Clustering Algorithms |
| mixsmsn | Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions |
| mixSPE | Mixtures of Power Exponential and Skew Power Exponential Distributions for Use in Model-Based Clustering and Classification |
| mixsqp | Sequential Quadratic Programming for Fast Maximum-Likelihood Estimation of Mixture Proportions |
| mixtools | Tools for Analyzing Finite Mixture Models |
| mixtox | Dose Response Curve Fitting and Mixture Toxicity Assessment |
| mixtur | Modelling Continuous Report Visual Short-Term Memory Studies |
| mixture | Mixture Models for Clustering and Classification |
| MixtureInf | Inference for Finite Mixture Models |
| MixtureMissing | Robust Model-Based Clustering for Data Sets with Missing Values at Random |
| MixtureRegLTIC | Mixture Regression Models for Left-Truncated and Interval-Censored Data |
| MixTwice | Large-Scale Hypothesis Testing by Variance Mixing |
| MixviR | Analysis and Exploration of Mixed Microbial Genomic Samples |
| mize | Unconstrained Numerical Optimization Algorithms |
| mizer | Multi-Species sIZE Spectrum Modelling in R |
| MKclass | Statistical Classification |
| MKdescr | Descriptive Statistics |
| mkin | Kinetic Evaluation of Chemical Degradation Data |
| MKinfer | Inferential Statistics |
| MKLE | Maximum Kernel Likelihood Estimation |
| MKMeans | A Modern K-Means (MKMeans) Clustering Algorithm |
| MKmisc | Miscellaneous Functions from M. Kohl |
| mknapsack | Multiple Knapsack Problem Solver |
| MKomics | Omics Data Analysis |
| MKpower | Power Analysis and Sample Size Calculation |
| mkssd | Efficient Multi-Level k-Circulant Supersaturated Designs |
| ML.MSBD | Maximum Likelihood Inference on Multi-State Trees |
| ML2Pvae | Variational Autoencoder Models for IRT Parameter Estimation |
| mlapi | Abstract Classes for Building 'scikit-learn' Like API |
| mlbench | Machine Learning Benchmark Problems |
| mlbstats | Major League Baseball Player Statistics Calculator |
| MLCIRTwithin | Latent Class Item Response Theory (LC-IRT) Models under Within-Item Multidimensionality |
| MLCM | Maximum Likelihood Conjoint Measurement |
| MLDataR | Collection of Machine Learning Datasets for Supervised Machine Learning |
| mldr | Exploratory Data Analysis and Manipulation of Multi-Label Data Sets |
| mldr.datasets | R Ultimate Multilabel Dataset Repository |
| MLDS | Maximum Likelihood Difference Scaling |
| mle.tools | Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s) |
| mlearning | Machine Learning Algorithms with Unified Interface and Confusion Matrices |
| MLEcens | Computation of the MLE for Bivariate Interval Censored Data |
| mlegp | Maximum Likelihood Estimates of Gaussian Processes |
| mlergm | Multilevel Exponential-Family Random Graph Models |
| MLeval | Machine Learning Model Evaluation |
| mlf | Machine Learning Foundations |
| mlfit | Iterative Proportional Fitting Algorithms for Nested Structures |
| mlflow | Interface to 'MLflow' |
| MLFS | Machine Learning Forest Simulator |
| MLGdata | Datasets for Use with Salvan, Sartori and Pace (2020) |
| MLGL | Multi-Layer Group-Lasso |
| MLID | Multilevel Index of Dissimilarity |
| mlim | Missing Data Imputation with Automated Machine Learning |
| mlma | Multilevel Mediation Analysis |
| mlmc | Multi-Level Monte Carlo |
| MLmetrics | Machine Learning Evaluation Metrics |
| mlmi | Maximum Likelihood Multiple Imputation |
| MLML2R | Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions |
| mlmm.gwas | Pipeline for GWAS Using MLMM |
| mlmmm | ML estimation under multivariate linear mixed models with missing values |
| MLModelSelection | Model Selection in Multivariate Longitudinal Data Analysis |
| MLMOI | Estimating Frequencies, Prevalence and Multiplicity of Infection |
| mlmRev | Examples from Multilevel Modelling Software Review |
| mlmts | Machine Learning Algorithms for Multivariate Time Series |
| MLMusingR | Practical Multilevel Modeling |
| mlogit | Multinomial Logit Models |
| mlogitBMA | Bayesian Model Averaging for Multinomial Logit Models |
| mlpack | 'Rcpp' Integration for the 'mlpack' Library |
| MLpreemption | Maximum Likelihood Estimation of the Niche Preemption Model |
| MLPUGS | Multi-Label Prediction Using Gibbs Sampling (and Classifier Chains) |
| mlquantify | Algorithms for Class Distribution Estimation |
| mlr | Machine Learning in R |
| mlr3 | Machine Learning in R - Next Generation |
| mlr3benchmark | Analysis and Visualisation of Benchmark Experiments |
| mlr3cluster | Cluster Extension for 'mlr3' |
| mlr3data | Collection of Machine Learning Data Sets for 'mlr3' |
| mlr3db | Data Base Backend for 'mlr3' |
| mlr3fairness | Fairness Auditing and Debiasing for 'mlr3' |
| mlr3filters | Filter Based Feature Selection for 'mlr3' |
| mlr3fselect | Feature Selection for 'mlr3' |
| mlr3hyperband | Hyperband for 'mlr3' |
| mlr3learners | Recommended Learners for 'mlr3' |
| mlr3measures | Performance Measures for 'mlr3' |
| mlr3misc | Helper Functions for 'mlr3' |
| mlr3oml | Connector Between 'mlr3' and 'OpenML' |
| mlr3pipelines | Preprocessing Operators and Pipelines for 'mlr3' |
| mlr3shiny | Machine Learning in 'shiny' with 'mlr3' |
| mlr3spatial | Support for Spatial Objects Within the 'mlr3' Ecosystem |
| mlr3spatiotempcv | Spatiotemporal Resampling Methods for 'mlr3' |
| mlr3tuning | Tuning for 'mlr3' |
| mlr3tuningspaces | Search Spaces for Hyperparameter Tuning |
| mlr3verse | Easily Install and Load the 'mlr3' Package Family |
| mlr3viz | Visualizations for 'mlr3' |
| mlrCPO | Composable Preprocessing Operators and Pipelines for Machine Learning |
| mlrintermbo | Model-Based Optimization for 'mlr3' Through 'mlrMBO' |
| mlrMBO | Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions |
| mlrpro | Stepwise Regression with Assumptions Checking |
| mlsbm | Efficient Estimation of Bayesian SBMs & MLSBMs |
| mlsjunkgen | Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers |
| mlt | Most Likely Transformations |
| mlt.docreg | Most Likely Transformations: Documentation and Regression Tests |
| mltest | Classification Evaluation Metrics |
| mltools | Machine Learning Tools |
| mlVAR | Multi-Level Vector Autoregression |
| MLVSBM | A Stochastic Block Model for Multilevel Networks |
| mlxR | Simulation of Longitudinal Data |
| MLZ | Mean Length-Based Estimators of Mortality using TMB |
| MM | The Multiplicative Multinomial Distribution |
| MM2S | Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines |
| MM2Sdata | Gene Expression Datasets for the 'MM2S' Package |
| MM4LMM | Inference of Linear Mixed Models Through MM Algorithm |
| mma | Multiple Mediation Analysis |
| mmabig | Multiple Mediation Analysis for Big Data Sets |
| MMAC | Data for Mathematical Modeling and Applied Calculus |
| mmand | Mathematical Morphology in Any Number of Dimensions |
| mmap | Map Pages of Memory |
| mmapcharr | Memory-Map Character Files |
| mmaqshiny | Explore Air-Quality Mobile-Monitoring Data |
| mmb | Arbitrary Dependency Mixed Multivariate Bayesian Models |
| mmc | Multivariate Measurement Error Correction |
| mmcif | Mixed Multivariate Cumulative Incidence Functions |
| mmcm | Modified Maximum Contrast Method |
| MMD | Minimal Multilocus Distance (MMD) for Source Attribution and Loci Selection |
| MMDai | Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Categorical Data |
| MMDCopula | Robust Estimation of Copulas by Maximum Mean Discrepancy |
| MMDvariance | Detecting Differentially Variable Genes Using the Mixture of Marginal Distributions |
| mme | Multinomial Mixed Effects Models |
| mmeln | Estimation of Multinormal Mixture Distribution |
| MMeM | Multivariate Mixed Effects Model |
| mmeta | Multivariate Meta-Analysis |
| MMINP | Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor |
| MMLR | Fitting Markov-Modulated Linear Regression Models |
| mmmgee | Simultaneous Inference for Multiple Linear Contrasts in GEE Models |
| mmod | Modern Measures of Population Differentiation |
| mMPA | Implementation of Marker-Assisted Mini-Pooling with Algorithm |
| mmpf | Monte-Carlo Methods for Prediction Functions |
| mmpp | Various Similarity and Distance Metrics for Marked Point Processes |
| mmr | Matrix Multiplication on Data.frames |
| MMRcaseselection | Case Classification and Selection Based on Regression Results |
| mmsample | Multivariate Matched Sampling |
| mmtsne | Multiple Maps t-SNE |
| MMVBVS | Missing Multivariate Bayesian Variable Selection |
| MMWRweek | Convert Dates to MMWR Day, Week, and Year |
| MNARclust | Clustering Data with Non-Ignorable Missingness using Semi-Parametric Mixture Models |
| MNB | Diagnostic Tools for a Multivariate Negative Binomial Model |
| mnis | Easy Downloading Capabilities for the Members' Name Information Service |
| mniw | The Matrix-Normal Inverse-Wishart Distribution |
| mnj | Machine Learning and Judgement |
| mnlfa | Moderated Nonlinear Factor Analysis |
| MNLpred | Simulated Predicted Probabilities for Multinomial Logit Models |
| MNLR | Interactive Shiny Presentation for Working with Multinomial Logistic Regression |
| MNM | Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks |
| mnonr | A Generator of Multivariate Non-Normal Random Numbers |
| mnorm | Multivariate Normal Distribution |
| mnormt | The Multivariate Normal and t Distributions, and Their Truncated Versions |
| MNP | Fitting the Multinomial Probit Model |
| mnreadR | MNREAD Parameters Estimation and Curve Plotting |
| MNS | Mixed Neighbourhood Selection |
| mnt | Affine Invariant Tests of Multivariate Normality |
| mob | Monotonic Optimal Binning |
| MobileTrigger | Run Reports, Models, and Scripts from a Mobile Device |
| mobilityIndexR | Calculates Transition Matrices and Mobility Indices |
| mobirep | Models Bivariate Dependence and Produces Bivariate Return Periods |
| MoBPS | Modular Breeding Program Simulator |
| mobr | Measurement of Biodiversity |
| moc | General Nonlinear Multivariate Finite Mixtures |
| MOCCA | Multi-Objective Optimization for Collecting Cluster Alternatives |
| mockery | Mocking Library for R |
| mockr | Mocking in R |
| mockthat | Function Mocking for Unit Testing in R |
| mod | Lightweight and Self-Contained Modules for Code Organization |
| mod09nrt | Extraction of Bands from MODIS Surface Reflectance Product MOD09 NRT |
| mod2rm | Moderation Analysis for Two-Instance Repeated Measures Designs |
| Modalclust | Hierarchical Modal Clustering |
| modchart | A 'shiny' Module for Creating Charts of Various Types |
| modeest | Mode Estimation |
| modehunt | Multiscale Analysis for Density Functions |
| model4you | Stratified and Personalised Models Based on Model-Based Trees and Forests |
| modelbased | Estimation of Model-Based Predictions, Contrasts and Means |
| modelc | A Linear Model to 'SQL' Compiler |
| Modelcharts | Classification Model Charts |
| modeldata | Data Sets Useful for Modeling Examples |
| modeldb | Fits Models Inside the Database |
| modelDown | Make Static HTML Website for Predictive Models |
| Modeler | Classes and Methods for Training and Using Binary Prediction Models |
| modelgrid | A Framework for Creating, Managing and Training Multiple Caret Models |
| modelimpact | Functions to Assess the Business Impact of Churn Prediction Models |
| modeLLtest | Compare Models with Cross-Validated Log-Likelihood |
| ModelMap | Modeling and Map Production using Random Forest and Related Stochastic Models |
| ModelMatrixModel | Create Model Matrix and Save the Transforming Parameters |
| ModelMetrics | Rapid Calculation of Model Metrics |
| modelObj | A Model Object Framework for Regression Analysis |
| modelplotr | Plots to Evaluate the Business Performance of Predictive Models |
| modelr | Modelling Functions that Work with the Pipe |
| modelROC | Model Based ROC Analysis |
| modelStudio | Interactive Studio for Explanatory Model Analysis |
| modelsummary | Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready |
| modeltests | Testing Infrastructure for Broom Model Generics |
| modeltime | The Tidymodels Extension for Time Series Modeling |
| modeltime.ensemble | Ensemble Algorithms for Time Series Forecasting with Modeltime |
| modeltime.gluonts | 'GluonTS' Deep Learning |
| modeltime.h2o | Modeltime 'H2O' Machine Learning |
| modeltime.resample | Resampling Tools for Time Series Forecasting |
| modeltools | Tools and Classes for Statistical Models |
| modelwordcloud | Model Word Clouds |
| moderndive | Tidyverse-Friendly Introductory Linear Regression |
| modernVA | An Implementation of Two Modern Education-Based Value-Added Models |
| modest | Model-Based Dose-Escalation Trials |
| ModEstM | Mode Estimation, Even in the Multimodal Case |
| modesto | Modeling and Analysis of Stochastic Systems |
| modEvA | Model Evaluation and Analysis |
| modgetxl | A 'shiny' Module for Reading Excel Sheets |
| modi | Multivariate Outlier Detection and Imputation for Incomplete Survey Data |
| modifiedmk | Modified Versions of Mann Kendall and Spearman's Rho Trend Tests |
| MODISTools | Interface to the 'MODIS Land Products Subsets' Web Services |
| MODIStsp | Find, Download and Process MODIS Land Products Data |
| modmarg | Calculating Marginal Effects and Levels with Errors |
| modMax | Community Structure Detection via Modularity Maximization |
| modnets | Modeling Moderated Networks |
| modopt.matlab | 'MatLab'-Style Modeling of Optimization Problems |
| modQR | Multiple-Output Directional Quantile Regression |
| ModStatR | Statistical Modelling in Action with R |
| ModTools | Tools for Building Regression and Classification Models |
| modTurPoint | Estimate ED50 Based on Modified Turning Point Method |
| moduleColor | Basic Module Functions |
| modules | Self Contained Units of Source Code |
| modygliani | MOlecular DYnamics GLobal ANalysis |
| MOEADr | Component-Wise MOEA/D Implementation |
| MoEClust | Gaussian Parsimonious Clustering Models with Covariates and a Noise Component |
| moexer | Interact with Moscow Exchange Informational and Statistical Server ('ISS') |
| mogavs | Multiobjective Genetic Algorithm for Variable Selection in Regression |
| mojson | A Serialization-Style Flattening and Description for JSON |
| mokken | Conducts Mokken Scale Analysis |
| moko | Multi-Objective Kriging Optimization |
| molaR | Dental Surface Complexity Measurement Tools |
| MoLE | Modeling Language Evolution |
| MolgenisArmadillo | Armadillo Client for the Armadillo Service |
| MolgenisAuth | 'OpenID Connect' Discovery and Authentication |
| MOLHD | Multiple Objective Latin Hypercube Design |
| molic | Multivariate Outlier Detection in Contingency Tables |
| molnet | Predicting Differential Drug Response using Multi-Omics Networks |
| mombf | Bayesian Model Selection and Averaging for Non-Local and Local Priors |
| momentchi2 | Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables |
| momentfit | Methods of Moments |
| moments | Moments, Cumulants, Skewness, Kurtosis and Related Tests |
| momentuHMM | Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models |
| Momocs | Morphometrics using R |
| MoMPCA | Inference and Clustering for Mixture of Multinomial Principal Component Analysis |
| momr | Mining Metaomics Data (MetaOMineR) |
| MomTrunc | Moments of Folded and Doubly Truncated Multivariate Distributions |
| monaco | The 'Monaco' Editor as a HTML Widget |
| monashtipr | An R API Wrapper for the Monash University Probabilistic Footy Tipping Competition |
| mondate | Keep Track of Dates in Terms of Months |
| Mondrian | A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events |
| MonetDB.R | Connect MonetDB to R |
| mongolite | Fast and Simple 'MongoDB' Client for R |
| mongopipe | Query MongoDB Documents with R |
| monitoR | Acoustic Template Detection in R |
| monmlp | Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints |
| monobin | Monotonic Binning for Credit Rating Models |
| monobinShiny | Shiny User Interface for 'monobin' Package |
| monochromeR | Easily Create, View and Use Monochrome Colour Palettes |
| monoClust | Perform Monothetic Clustering with Extensions to Circular Data |
| monographaR | Taxonomic Monographs Tools |
| MonoInc | Monotonic Increasing |
| monomvn | Estimation for MVN and Student-t Data with Monotone Missingness |
| MonoPhy | Explore Monophyly of Taxonomic Groups in a Phylogeny |
| MonoPoly | Functions to Fit Monotone Polynomials |
| monoreg | Bayesian Monotonic Regression Using a Marked Point Process Construction |
| monotone | Performs Monotone Regression |
| monotonicity | Test for Monotonicity in Expected Asset Returns, Sorted by Portfolios |
| monreg | Nonparametric Monotone Regression |
| Monte.Carlo.se | Monte Carlo Standard Errors |
| MonteCarlo | Automatic Parallelized Monte Carlo Simulations |
| MonteCarloSEM | Monte Carlo Data Simulation Package |
| moodleR | Helper Functions to Work with 'Moodle' Data |
| moonBook | Functions and Datasets for the Book by Keon-Woong Moon |
| mopac | Collection of Datasets Pertaining to Loop 1 "Mopac" |
| MOQA | Basic Quality Data Assurance for Epidemiological Research |
| moranajp | Morphological Analysis for Japanese |
| moreparty | A Toolbox for Conditional Inference Trees and Random Forests |
| morph | 3D Segmentation of Voxels into Morphologic Classes |
| morphemepiece | Morpheme Tokenization |
| morphemepiece.data | Data for Morpheme Tokenization |
| Morpho | Calculations and Visualisations Related to Geometric Morphometrics |
| morphomap | Morphometric Maps, Bone Landmarking and Cross Sectional Geometry |
| Morphoscape | Computation and Visualization of Adaptive Landscapes |
| MorphoTools2 | Multivariate Morphometric Analysis |
| mortAAR | Analysis of Archaeological Mortality Data |
| MortalityGaps | The Double-Gap Life Expectancy Forecasting Model |
| MortalityLaws | Parametric Mortality Models, Life Tables and HMD |
| MortalityTables | A Framework for Various Types of Mortality / Life Tables |
| MortCast | Estimation and Projection of Age-Specific Mortality Rates |
| mortyr | Wrapper to 'The Rick and Morty' API |
| mosaic | Project MOSAIC Statistics and Mathematics Teaching Utilities |
| mosaicCalc | Function-Based Numerical and Symbolic Differentiation and Antidifferentiation |
| mosaicCore | Common Utilities for Other MOSAIC-Family Packages |
| mosaicData | Project MOSAIC Data Sets |
| mosaicModel | An Interface to Statistical Modeling Independent of Model Architecture |
| mosmafs | Multi-Objective Simultaneous Model and Feature Selection |
| mosqcontrol | Mosquito Control Resource Optimization |
| MOSS | Multi-Omic Integration via Sparse Singular Value Decomposition |
| MOST | Multiphase Optimization Strategy |
| mosum | Moving Sum Based Procedures for Changes in the Mean |
| MoTBFs | Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions |
| MOTE | Effect Size and Confidence Interval Calculator |
| motif | Local Pattern Analysis |
| motifcluster | Motif-Based Spectral Clustering of Weighted Directed Networks |
| motifr | Motif Analysis in Multi-Level Networks |
| motmot | Models of Trait Macroevolution on Trees |
| motoRneuron | Analyzing Paired Neuron Discharge Times for Time-Domain Synchronization |
| moult | Models for Analysing Moult in Birds |
| mountainplot | Mountain Plots, Folded Empirical Cumulative Distribution Plots |
| mousetrap | Process and Analyze Mouse-Tracking Data |
| move | Visualizing and Analyzing Animal Track Data |
| movecost | Calculation of Slope-Dependant Accumulated Cost Surface, Least-Cost Paths, Least-Cost Corridors, Least-Cost Networks Related to Human Movement Across the Landscape |
| moveHMM | Animal Movement Modelling using Hidden Markov Models |
| moveVis | Movement Data Visualization |
| moveWindSpeed | Estimate Wind Speeds from Bird Trajectories |
| movMF | Mixtures of von Mises-Fisher Distributions |
| mp | Multidimensional Projection Techniques |
| MPAgenomics | Multi-Patient Analysis of Genomic Markers |
| mpath | Regularized Linear Models |
| mpathsenser | Process and Analyse Data from m-Path Sense |
| MPBoost | Treatment Allocation in Clinical Trials by the Maximal Procedure |
| MPCI | Multivariate Process Capability Indices (MPCI) |
| MPDiR | Data Sets and Scripts for Modeling Psychophysical Data in R |
| mpe | Multiple Primary Endpoints |
| MPGE | A Two-Step Approach to Testing Overall Effect of Gene-Environment Interaction for Multiple Phenotypes |
| MPI | Computation of Multidimensional Poverty Index (MPI) |
| MPLikelihoodWB | Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters |
| mplot | Graphical Model Stability and Variable Selection Procedures |
| MplusAutomation | An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus |
| MplusTrees | Decision Trees with Structural Equation Models Fit in 'Mplus' |
| mpm | Multivariate Projection Methods |
| mpmcorrelogram | Multivariate Partial Mantel Correlogram |
| mpmi | Mixed-Pair Mutual Information Estimators |
| MPN | Most Probable Number and Other Microbial Enumeration Techniques |
| mpoly | Symbolic Computation and More with Multivariate Polynomials |
| mppR | Multi-Parent Population QTL Analysis |
| mpr | Multi-Parameter Regression (MPR) |
| MPR.genotyping | Maximum Parsimony of Recombination to Infer Parental Genotypes |
| MPS | Estimating Through the Maximum Product Spacing Approach |
| MPSEM | Modeling Phylogenetic Signals using Eigenvector Maps |
| mpspline2 | Mass-Preserving Spline Functions for Soil Data |
| MPsychoR | Modern Psychometrics with R |
| mpt | Multinomial Processing Tree Models |
| MPTinR | Analyze Multinomial Processing Tree Models |
| MPTmultiverse | Multiverse Analysis of Multinomial Processing Tree Models |
| MPV | Data Sets from Montgomery, Peck and Vining |
| mpwR | Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics |
| MQMF | Modelling and Quantitative Methods in Fisheries |
| Mqrcm | M-Quantile Regression Coefficients Modeling |
| mr.raps | Two Sample Mendelian Randomization using Robust Adjusted Profile Score |
| mra | Mark-Recapture Analysis |
| mratios | Ratios of Coefficients in the General Linear Model |
| mrbayes | Bayesian Summary Data Models for Mendelian Randomization Studies |
| mrbin | Metabolomics Data Analysis Functions |
| mrbsizeR | Scale Space Multiresolution Analysis of Random Signals |
| MRCE | Multivariate Regression with Covariance Estimation |
| mrds | Mark-Recapture Distance Sampling |
| mreg | Fits Regression Models When the Outcome is Partially Missing |
| mregions | Marine Regions Data from 'Marineregions.org' |
| mrf | Multiresolution Forecasting |
| mrf2d | Markov Random Field Models for Image Analysis |
| MRFA | Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach |
| MRFcov | Markov Random Fields with Additional Covariates |
| mrfDepth | Depth Measures in Multivariate, Regression and Functional Settings |
| mrfse | Markov Random Field Structure Estimator |
| mrgsim.parallel | Simulate with 'mrgsolve' in Parallel |
| mrgsim.sa | Sensitivity Analysis with 'mrgsolve' |
| mrgsolve | Simulate from ODE-Based Models |
| MRH | Multi-Resolution Estimation of the Hazard Rate |
| MRHawkes | Multivariate Renewal Hawkes Process |
| mri | Modified Rand and Wallace Indices |
| mritc | MRI Tissue Classification |
| MRmediation | A Causal Mediation Method with Methylated Region (MR) as the Mediator |
| mrMLM | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS |
| mrMLM.GUI | Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface |
| mRMRe | Parallelized Minimum Redundancy, Maximum Relevance (mRMR) |
| mro | Multiple Correlation |
| MRPC | PC Algorithm with the Principle of Mendelian Randomization |
| MRQoL | Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life |
| MRReg | MDL Multiresolution Linear Regression Framework |
| mrregression | Regression Analysis for Very Large Data Sets via Merge and Reduce |
| MRS | Multi-Resolution Scanning for Cross-Sample Differences |
| MrSGUIDE | Multiple Responses Subgroup Identification using 'GUIDE' Algorithm |
| MRTSampleSize | A Sample Size Calculator for Micro-Randomized Trials |
| MRTSampleSizeBinary | Sample Size Calculator for MRT with Binary Outcomes |
| ms.sev | Package for Calculation of ARMSS, Local MSSS and Global MSSS |
| msae | Multivariate Fay Herriot Models for Small Area Estimation |
| msaeDB | Difference Benchmarking for Multivariate Small Area Estimation |
| msaeHB | Multivariate Small Area Estimation using Hierarchical Bayesian Method |
| msaenet | Multi-Step Adaptive Estimation Methods for Sparse Regressions |
| msaeOB | Optimum Benchmarking for Multivariate Small Area Estimation |
| msaeRB | Ratio Benchmarking for Multivariate Small Area Estimation |
| msaFACE | Moving Subset Analysis FACE |
| msaR | Multiple Sequence Alignment for R Shiny |
| MSbox | Mass Spectrometry Tools |
| msBP | Multiscale Bernstein Polynomials for Densities |
| msce | Hazard of Multi-Stage Clonal Expansion Models |
| mschart | Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents |
| MSclassifR | Automated Classification of Mass Spectra |
| MSclust | Multiple-Scaled Clustering |
| MSCMT | Multivariate Synthetic Control Method Using Time Series |
| MScombine | Combine Data from Positive and Negative Ionization Mode Finding Common Entities |
| mscp | Multiscale Change Point Detection via Gradual Bandwidth Adjustment in Moving Sum Processes |
| MSCquartets | Analyzing Gene Tree Quartets under the Multi-Species Coalescent |
| MSCsimtester | Tests of Multispecies Coalescent Gene Tree Simulator Output |
| mscstexta4r | R Client for the Microsoft Cognitive Services Text Analytics REST API |
| mscstts | R Client for the Microsoft Cognitive Services 'Text-to-Speech' REST API |
| mscsweblm4r | R Client for the Microsoft Cognitive Services Web Language Model REST API |
| msd | Method of Successive Dichotomizations |
| msde | Bayesian Inference for Multivariate Stochastic Differential Equations |
| MSEtool | Management Strategy Evaluation Toolkit |
| MSG | Data and Functions for the Book Modern Statistical Graphics |
| MSGARCH | Markov-Switching GARCH Models |
| MSGARCHelm | Hybridization of MS-GARCH and ELM Model |
| msgl | Multinomial Sparse Group Lasso |
| MSGLasso | Multivariate Sparse Group Lasso for the Multivariate Multiple Linear Regression with an Arbitrary Group Structure |
| msgpackR | A library to serialize or unserialize data in MessagePack format |
| msgps | Degrees of Freedom of Elastic Net, Adaptive Lasso and Generalized Elastic Net |
| msgr | Extends Messages, Warnings and Errors by Adding Levels and Log Files |
| mshap | Multiplicative SHAP Values for Two-Part Models |
| msig | An R Package for Exploring Molecular Signatures Database |
| msigdbr | MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format |
| mSimCC | Micro Simulation Model for Cervical Cancer Prevention |
| MSiP | 'MassSpectrometry' Interaction Prediction |
| msir | Model-Based Sliced Inverse Regression |
| mskcc.oncotree | Interface to the 'OncoTree' API |
| msltrend | Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records |
| msm | Multi-State Markov and Hidden Markov Models in Continuous Time |
| msma | Multiblock Sparse Multivariable Analysis |
| msme | Functions and Datasets for "Methods of Statistical Model Estimation" |
| msmtools | Building Augmented Data to Run Multi-State Models with 'msm' Package |
| MSMwRA | Multivariate Statistical Methods with R Applications |
| msos | Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden |
| MSPRT | A Modified Sequential Probability Ratio Test (MSPRT) |
| MSQC | Multivariate Statistical Quality Control |
| MSRDT | Multi-State Reliability Demonstration Tests (MSRDT) |
| mssm | Multivariate State Space Models |
| msSPChelpR | Helper Functions for Second Primary Cancer Analyses |
| MSSQL | Tools to Work with Microsoft SQL Server Databases via 'RODBC' |
| MST | Multivariate Survival Trees |
| mstate | Data Preparation, Estimation and Prediction in Multi-State Models |
| mStats | Epidemiological Data Analysis |
| mstclustering | "MST-Based Clustering" |
| mstDIF | A Collection of DIF Tests for Multistage Tests |
| mSTEM | Multiple Testing of Local Extrema for Detection of Change Points |
| mstherm | Analyze MS/MS Protein Melting Data |
| mstknnclust | MST-kNN Clustering Algorithm |
| mstR | Procedures to Generate Patterns under Multistage Testing |
| mstrio | Interface for 'MicroStrategy' REST API |
| msu | Multivariate Symmetric Uncertainty and Other Measurements |
| MSwM | Fitting Markov Switching Models |
| mt | Metabolomics Data Analysis Toolbox |
| MTA | Multiscalar Territorial Analysis |
| MTAR | Multi-Trait Analysis of Rare-Variant Association Study |
| mtb | Toolkit for Assisting Kitchen and Garden Projects |
| mtconnectR | Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis |
| MTDrh | Mass Transportation Distance Rank Histogram |
| MTE | Maximum Tangent Likelihood Estimation for Linear Regression |
| mthapower | Sample Size and Power for Association Studies Involving Mitochondrial DNA Haplogroups |
| MTLR | Survival Prediction with Multi-Task Logistic Regression |
| MTPS | Multi-Task Prediction using Stacking Algorithms |
| MtreeRing | A Shiny Application for Automatic Measurements of Tree-Ring Widths on Digital Images |
| MTS | All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models |
| mtsdi | Multivariate Time Series Data Imputation |
| MTSYS | Methods in Mahalanobis-Taguchi (MT) System |
| MUACz | Generate MUAC and BMI z-Scores and Percentiles for Children and Adolescents |
| MuChPoint | Multiple Change Point |
| muckrock | Data on Freedom of Information Act Requests |
| mudata2 | Interchange Tools for Multi-Parameter Spatiotemporal Data |
| mudens | Density Estimate |
| mudfold | Multiple UniDimensional unFOLDing |
| mueRelativeRisk | Relative Risk Based on the Ratio of Median Unbiased Estimates |
| muhaz | Hazard Function Estimation in Survival Analysis |
| muHVT | Constructing Hierarchical Voronoi Tessellations and Overlay Heatmap for Data Analysis |
| muir | Exploring Data with Tree Data Structures |
| MullerPlot | Generates Muller Plot from Population/Abundance/Frequency Dynamics Data |
| mully | Create, Modify and Visualize Multi-Layered Networks |
| mulset | Multiset Intersection Generator |
| MultAlloc | Optimal Allocation in Stratified Sampling |
| MultBiplotR | Multivariate Analysis Using Biplots in R |
| multbxxc | Auxiliary Routines for Influx Software |
| multcomp | Simultaneous Inference in General Parametric Models |
| multcompView | Visualizations of Paired Comparisons |
| multDM | Multivariate Version of the Diebold-Mariano Test |
| MultEq | Multiple Equivalence Tests and Simultaneous Confidence Intervals |
| multfisher | Optimal Exact Tests for Multiple Binary Endpoints |
| multgee | GEE Solver for Correlated Nominal or Ordinal Multinomial Responses |
| multiActionButton | Multi Action Button for 'Shiny' Applications |
| multiApply | Apply Functions to Multiple Multidimensional Arrays or Vectors |
| multiAssetOptions | Finite Difference Method for Multi-Asset Option Valuation |
| MultiATSM | Multicountry Term Structure of Interest Rates Models |
| MultiBD | Multivariate Birth-Death Processes |
| multibiplotGUI | Multibiplot Analysis in R |
| multiblock | Multiblock Data Fusion in Statistics and Machine Learning |
| multibridge | Evaluating Multinomial Order Restrictions with Bridge Sampling |
| multiCA | Multinomial Cochran-Armitage Trend Test |
| multicastR | A Companion to the Multi-CAST Collection |
| multichull | A Generic Convex-Hull-Based Model Selection Method |
| multiclassPairs | Build MultiClass Pair-Based Classifiers using TSPs or RF |
| multicmp | Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution |
| multiColl | Collinearity Detection in a Multiple Linear Regression Model |
| multicolor | Add Multiple Colors to your Console & RMarkdown Output |
| multicool | Permutations of Multisets in Cool-Lex Order |
| multid | Multivariate Difference Between Two Groups |
| multiDimBio | Multivariate Analysis and Visualization for Biological Data |
| multidplyr | A Multi-Process 'dplyr' Backend |
| multifamm | Multivariate Functional Additive Mixed Models |
| multifear | Multiverse Analyses for Conditioning Data |
| MultiFit | Multiscale Fisher's Independence Test for Multivariate Dependence |
| multifunc | Analysis of Ecological Drivers on Ecosystem Multifunctionality |
| multifwf | Read Fixed Width Format Files Containing Lines of Different Type |
| multigraph | Plot and Manipulate Multigraphs |
| multigraphr | Probability Models and Statistical Analysis of Random Multigraphs |
| multigroup | Multigroup Data Analysis |
| MultiGroupO | MultiGroup Method and Simulation Data Analysis |
| MultiJoin | Enables Efficient Joining of Data File on Common Fields using the Unix Utility Join |
| MultiKink | Estimation and Inference for Multi-Kink Quantile Regression |
| multilateral | Generalised Function to Calculate a Variety of Multilateral Price Index Methods |
| multilaterals | Transitive Index Numbers for Cross-Sections and Panel Data |
| MultiLCIRT | Multidimensional Latent Class Item Response Theory Models |
| multilevel | Multilevel Functions |
| multilevelmod | Model Wrappers for Multi-Level Models |
| multilevelPSA | Multilevel Propensity Score Analysis |
| multilevelTools | Multilevel and Mixed Effects Model Diagnostics and Effect Sizes |
| multilinguer | Gentle Language Installer for R User |
| multimark | Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks |
| multiMarker | Latent Variable Model to Infer Food Intake from Multiple Biomarkers |
| multimode | Mode Testing and Exploring |
| multimorbidity | Harmonizing Various Comorbidity, Multimorbidity, and Frailty Measures |
| multinet | Analysis and Mining of Multilayer Social Networks |
| multinets | Multilevel Networks Analysis |
| multinma | Bayesian Network Meta-Analysis of Individual and Aggregate Data |
| MultinomialCI | Simultaneous Confidence Intervals for Multinomial Proportions According to the Method by Sison and Glaz |
| multinomineq | Bayesian Inference for Multinomial Models with Inequality Constraints |
| multIntTestFunc | Provides Test Functions for Multivariate Integration |
| MultiObjMatch | Multi-Objective Matching Algorithm |
| multiocc | Fits Multivariate Spatio-Temporal Occupancy Model |
| MultiOrd | Generation of Multivariate Ordinal Variates |
| multipanelfigure | Infrastructure to Assemble Multi-Panel Figures (from Grobs) |
| MultiPhen | A Package to Test for Multi-Trait Association |
| MultipleBreakpoints | Estimating Multiple Breakpoints for a Sequence of Realizations of Bernoulli Variables |
| MultipleBubbles | Test and Detection of Explosive Behaviors for Time Series |
| multipleNCC | Weighted Cox-Regression for Nested Case-Control Data |
| MultipleRegression | Multiple Regression Analysis |
| multiplestressR | Additive and Multiplicative Null Models for Multiple Stressor Data |
| multiplex | Algebraic Tools for the Analysis of Multiple Social Networks |
| MultiplierDEA | Multiplier Data Envelopment Analysis and Cross Efficiency |
| multipol | Multivariate Polynomials |
| multiRDPG | Multiple Random Dot Product Graphs |
| multirich | Calculate Multivariate Richness via UTC and sUTC |
| multiridge | Fast Cross-Validation for Multi-Penalty Ridge Regression |
| MultiRNG | Multivariate Pseudo-Random Number Generation |
| MultiRobust | Multiply Robust Methods for Missing Data Problems |
| multiROC | Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications |
| MultiRR | Bias, Precision, and Power for Multi-Level Random Regressions |
| MultIS | Reconstruction of Clones from Integration Site Readouts and Visualization |
| multiselect | Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome |
| multisensi | Multivariate Sensitivity Analysis |
| multisite.accuracy | Estimation of Accuracy in Multisite Machine-Learning Models |
| MultisiteMediation | Causal Mediation Analysis in Multisite Trials |
| MultiSkew | Measures, Tests and Removes Multivariate Skewness |
| multisom | Clustering a Data Set using Multi-SOM Algorithm |
| multispatialCCM | Multispatial Convergent Cross Mapping |
| multitaper | Spectral Analysis Tools using the Multitaper Method |
| multiUS | Functions for the Courses Multivariate Analysis and Computer Intensive Methods |
| multivar | Penalized Estimation of Multiple-Subject Vector Autoregressive (multi-VAR) Models |
| multivariance | Measuring Multivariate Dependence Using Distance Multivariance |
| MultivariateAnalysis | Pacote Para Analise Multivariada |
| MultivariateRandomForest | Models Multivariate Cases Using Random Forests |
| MultiVarMI | Multiple Imputation for Multivariate Data |
| MultiVarSel | Variable Selection in a Multivariate Linear Model |
| multivator | A Multivariate Emulator |
| multiverse | 'Explorable Multiverse' Data Analysis and Reports |
| multiwave | Estimation of Multivariate Long-Memory Models Parameters |
| multiway | Component Models for Multi-Way Data |
| MultiwayRegression | Perform Tensor-on-Tensor Regression |
| multiwayvcov | Multi-Way Standard Error Clustering |
| MultNonParam | Multivariate Nonparametric Methods |
| MultOrdRS | Model Multivariate Ordinal Responses Including Response Styles |
| MultSurvTests | Permutation Tests for Multivariate Survival Analysis |
| multxpert | Common Multiple Testing Procedures and Gatekeeping Procedures |
| MulvariateRandomForestVarImp | Variable Importance Measures for Multivariate Random Forests |
| MuMIn | Multi-Model Inference |
| mumm | Multiplicative Mixed Models using the Template Model Builder |
| munfold | Metric Unfolding |
| munsell | Utilities for Using Munsell Colours |
| munsellinterpol | Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB |
| muRL | Mailmerge using R, LaTeX, and the Web |
| murphydiagram | Murphy Diagrams for Forecast Comparisons |
| muRty | Murty's Algorithm for k-Best Assignments |
| MUS | Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing |
| musclesyneRgies | Extract Muscle Synergies from Electromyography |
| music | Learn and Experiment with Music Theory |
| musica | Multiscale Climate Model Assessment |
| mustashe | Stash and Load Objects |
| mutoss | Unified Multiple Testing Procedures |
| mutossGUI | A Graphical User Interface for the MuToss Project |
| mutSignatures | Decipher Mutational Signatures from Somatic Mutational Catalogs |
| mutualinf | Computation and Decomposition of the Mutual Information Index |
| MuViCP | MultiClass Visualizable Classification using Combination of Projections |
| MVA | An Introduction to Applied Multivariate Analysis with R |
| mvabund | Statistical Methods for Analysing Multivariate Abundance Data |
| MVar | Multivariate Analysis |
| MVar.pt | Analise multivariada (brazilian portuguese) |
| MvBinary | Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution |
| mvbutils | Workspace Organization, Code and Documentation Editing, Package Prep and Editing, Etc |
| mvctm | Multivariate Variance Components Tests for Multilevel Data |
| mverse | Tidy Multiverse Analysis Made Simple |
| mvgb | Multivariate Probabilities of Scale Mixtures of Multivariate Normal Distributions via the Genz and Bretz (2002) QRSVN Method |
| mvglmmRank | Multivariate Generalized Linear Mixed Models for Ranking Sports Teams |
| mvGPS | Causal Inference using Multivariate Generalized Propensity Score |
| mvinfluence | Influence Measures and Diagnostic Plots for Multivariate Linear Models |
| MVisAGe | Compute and Visualize Bivariate Associations |
| MVLM | Multivariate Linear Model with Analytic p-Values |
| mvLSW | Multivariate, Locally Stationary Wavelet Process Estimation |
| mvmesh | Multivariate Meshes and Histograms in Arbitrary Dimensions |
| mvmeta | Multivariate and Univariate Meta-Analysis and Meta-Regression |
| mvMISE | A General Framework of Multivariate Mixed-Effects Selection Models |
| mvMonitoring | Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring |
| mvMORPH | Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data |
| MVN | Multivariate Normality Tests |
| mvna | Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models |
| MVNBayesian | Bayesian Analysis Framework for MVN (Mixture) Distribution |
| mvnfast | Fast Multivariate Normal and Student's t Methods |
| mvngGrAd | Moving Grid Adjustment in Plant Breeding Field Trials |
| mvnimpute | Simultaneously Impute the Missing and Censored Values |
| mvnormalTest | Powerful Tests for Multivariate Normality |
| mvnormtest | Normality test for multivariate variables |
| mvnpermute | Generate New Multivariate Normal Samples from Permutations |
| mvnTest | Goodness of Fit Tests for Multivariate Normality |
| MVNtestchar | Test for Multivariate Normal Distribution Based on a Characterization |
| mvord | Multivariate Ordinal Regression Models |
| mvoutlier | Multivariate Outlier Detection Based on Robust Methods |
| mvp | Fast Symbolic Multivariate Polynomials |
| mvpd | Multivariate Product Distributions for Elliptically Contoured Distributions |
| mvPot | Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events |
| mvProbit | Multivariate Probit Models |
| mvQuad | Methods for Multivariate Quadrature |
| MVQuickGraphs | Quick Multivariate Graphs |
| MVR | Mean-Variance Regularization |
| mvrsquared | Compute the Coefficient of Determination for Vector or Matrix Outcomes |
| mvShapiroTest | Generalized Shapiro-Wilk test for multivariate normality |
| mvSLOUCH | Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
| MVTests | Multivariate Hypothesis Tests |
| mvtmeta | Multivariate Meta-Analysis |
| mvtnorm | Multivariate Normal and t Distributions |
| mvtsplot | Multivariate Time Series Plot |
| mwa | Causal Inference in Spatiotemporal Event Data |
| mwcsr | Solvers for Maximum Weight Connected Subgraph Problem and Its Variants |
| MWLasso | Penalized Moving-Window Lasso Method for Genome-Wide Association Studies |
| MWRidge | Two Stage Moving-Window Ridge Method for Prediction and Estimation |
| MWright | Mainardi-Wright Family of Distributions |
| mwshiny | 'Shiny' for Multiple Windows |
| mwTensor | Multi-Way Component Analysis |
| mxkssd | Efficient Mixed-Level k-Circulant Supersaturated Designs |
| MXM | Feature Selection (Including Multiple Solutions) and Bayesian Networks |
| mxmmod | Measurement Model of Derivatives in 'OpenMx' |
| mxnorm | Apply Normalization Methods to Multiplexed Images |
| My.stepwise | Stepwise Variable Selection Procedures for Regression Analysis |
| Mychisq | Chi-Squared Test for Goodness of Fit and Independence Test |
| mycobacrvR | Integrative Immunoinformatics for Mycobacterial Diseases in R Platform |
| mycor | Automatic Correlation and Regression Test in a 'data.frame' |
| myTAI | Evolutionary Transcriptomics |
| n1qn1 | Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization |
| N2H4 | Handling Methods for Naver News Text Crawling |
| N2R | Fast and Scalable Approximate k-Nearest Neighbor Search Methods using 'N2' Library |
| na.tools | Comprehensive Library for Working with Missing (NA) Values in Vectors |
| naaccr | Read Cancer Records in the NAACCR Format |
| nabor | Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions |
| NACHO | NanoString Quality Control Dashboard |
| NADA | Nondetects and Data Analysis for Environmental Data |
| NADA2 | Data Analysis for Censored Environmental Data |
| NADIA | NA Data Imputation Algorithms |
| nadiv | (Non)Additive Genetic Relatedness Matrices |
| NAEPirtparams | IRT Parameters for the National Assessment of Education Progress |
| NAEPprimer | The NAEP Primer |
| naflex | Flexible Options for Handling Missing Values |
| naijR | Operations to Ease Data Analyses Specific to Nigeria |
| naive | Empirical Extrapolation of Time Feature Patterns |
| naivebayes | High Performance Implementation of the Naive Bayes Algorithm |
| naivereg | Nonparametric Additive Instrumental Variable Estimator and Related IV Methods |
| nakagami | Functions for the Nakagami Distribution |
| NAM | Nested Association Mapping |
| name | Tools for Working with Names |
| namedCapture | Named Capture Regular Expressions |
| namedropR | Create Visual Citations for Presentation Slides |
| NameNeedle | Using Needleman-Wunsch to Match Sample Names |
| namespace | Provide namespace managment functions not (yet) present in base R |
| nametagger | Named Entity Recognition in Texts using 'NameTag' |
| nandb | Number and Brightness Image Analysis |
| naniar | Data Structures, Summaries, and Visualisations for Missing Data |
| nanonext | NNG (Nanomsg Next Gen) Lightweight Messaging Library |
| nanop | Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function |
| nanostringr | Performs Quality Control, Data Normalization, and Batch Effect Correction for 'NanoString nCounter' Data |
| nanotime | Nanosecond-Resolution Time Support for R |
| NAP | Non-Local Alternative Priors in Psychology |
| naptanr | Call the 'NaPTAN' API Through R |
| naptime | A Flexible and Robust Sys.sleep() Replacement |
| nardl | Nonlinear Cointegrating Autoregressive Distributed Lag Model |
| narray | Subset- And Name-Aware Array Utility Functions |
| nasadata | Interface to Various NASA API's |
| nasapower | NASA POWER API Client |
| nasaweather | Collection of datasets from the ASA 2006 data expo |
| NasdaqDataLink | API Wrapper for Nasdaq Data Link |
| naspaclust | Nature-Inspired Spatial Clustering |
| nat | NeuroAnatomy Toolbox for Analysis of 3D Image Data |
| nat.nblast | NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron Similarity and Clustering |
| nat.templatebrains | NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains |
| nat.utils | File System Utility Functions for 'NeuroAnatomy Toolbox' |
| natcpp | Fast C++ Primitives for the 'NeuroAnatomy Toolbox' |
| natmanager | Install the 'Natverse' Packages from Scratch |
| natserv | 'NatureServe' Interface |
| natstrat | Obtain Unweighted Natural Strata that Balance Many Covariates |
| natural | Estimating the Error Variance in a High-Dimensional Linear Model |
| naturaList | Classify Occurrences by Confidence Levels in the Species ID |
| naturalsort | Natural Ordering |
| NatureSounds | Animal Sounds for Bioacustic Analysis |
| navigatr | Navigation Menu for Pipe-Friendly Data Processing |
| nawtilus | Navigated Weighting for the Inverse Probability Weighting |
| NB.MClust | Negative Binomial Model-Based Clustering |
| NBAloveR | Help Basketball Data Analysis |
| nbapalettes | An NBA Jersey Palette Generator |
| NBBDesigns | Neighbour Balanced Block Designs (NBBDesigns) |
| NBBttest | Negative Binomial Beta t-Test |
| nbc4va | Bayes Classifier for Verbal Autopsy Data |
| NbClust | Determining the Best Number of Clusters in a Data Set |
| nbconvertR | Vignette Engine Wrapping Jupyter Notebooks |
| NBDdirichlet | NBD-Dirichlet Model of Consumer Buying Behavior for Marketing Research |
| NBDesign | Design and Monitoring of Clinical Trials with Negative Binomial Endpoint |
| nberwp | NBER Working Papers |
| nbfar | Negative Binomial Factor Regression Models ('nbfar') |
| NBLDA | Negative Binomial Linear Discriminant Analysis |
| nbody | Gravitational N-Body Simulation |
| nbpMatching | Functions for Optimal Non-Bipartite Matching |
| NBPSeq | Negative Binomial Models for RNA-Sequencing Data |
| NBR | Network-Based R-Statistics using Mixed Effects Models |
| NBShiny | Interactive Document for Working with Naive Bayes Classification |
| NBShiny2 | Interactive Document for Working with Naive Bayes Classification |
| NBShiny3 | Interactive Document for Working with Naive Bayes Classification |
| nbTransmission | Naive Bayes Transmission Analysis |
| nc | Named Capture to Data Tables |
| NCA | Necessary Condition Analysis |
| ncappc | NCA Calculations and Population Model Diagnosis |
| ncar | Noncompartmental Analysis for Pharmacokinetic Report |
| ncbit | Retrieve and Build NBCI Taxonomic Data |
| ncdf4 | Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files |
| ncdf4.helpers | Helper Functions for Use with the 'ncdf4' Package |
| ncdfgeom | 'NetCDF' Geometry and Time Series |
| ncdump | Extract Metadata from 'NetCDF' Files as Data Frames |
| nCDunnett | Noncentral Dunnett's Test Distribution |
| ncf | Spatial Covariance Functions |
| ncmeta | Straightforward 'NetCDF' Metadata |
| NCmisc | Miscellaneous Functions for Creating Adaptive Functions and Scripts |
| ncodeR | Techniques for Automated Classifiers |
| nCopula | Hierarchical Archimedean Copulas Constructed with Multivariate Compound Distributions |
| nCov2019 | Exploring 'COVID'-19 Statistics |
| ncpen | Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models |
| NCSampling | Nearest Centroid (NC) Sampling |
| NCSCopula | Non-Central Squared Copula Models Estimation |
| NCutYX | Clustering of Omics Data of Multiple Types with a Multilayer Network Representation |
| ncvreg | Regularization Paths for SCAD and MCP Penalized Regression Models |
| ndi | Neighborhood Deprivation Indices |
| ndjson | Wicked-Fast Streaming 'JSON' ('ndjson') Reader |
| ndl | Naive Discriminative Learning |
| NDP | Interactive Presentation for Working with Normal Distribution |
| ndtv | Network Dynamic Temporal Visualizations |
| ndvtest | Shi's Non Degenerate Vuong Test |
| neariso | Near-Isotonic Regression |
| neat | Efficient Network Enrichment Analysis Test |
| neatmaps | Heatmaps for Multiple Network Data |
| neatRanges | Tidy Up Date/Time Ranges |
| neatStats | Neat and Painless Statistical Reporting |
| nebula | Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data |
| needmining | A Simple Needmining Implementation |
| needs | Attaches and Installs Packages |
| needy | needy |
| NegativeControlOutcomeAdjustment | Estimation of Vaccine Efficacy using Negative Control Outcomes |
| NegBinBetaBinreg | Negative Binomial and Beta Binomial Bayesian Regression Models |
| negenes | Estimating the Number of Essential Genes in a Genome |
| negligible | A Collection of Functions for Negligible Effect/Equivalence Testing |
| Neighboot | Neighborhood Bootstrap Method for RDS |
| neighbr | Classification, Regression, Clustering with K Nearest Neighbors |
| neldermead | R Port of the 'Scilab' Neldermead Module |
| neo2R | Neo4j to R |
| neo4jshell | Querying and Managing 'Neo4J' Databases in 'R' |
| neo4r | A 'Neo4J' Driver |
| NEONiso | Tools to Calibrate and Work with NEON Atmospheric Isotope Data |
| neonstore | NEON Data Store |
| neonUtilities | Utilities for Working with NEON Data |
| neotoma | Access to the Neotoma Paleoecological Database Through R |
| nephro | Utilities for Nephrology |
| NEpiC | Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals |
| neptune | MLOps Metadata Store - Experiment Tracking and Model Registry for Production Teams |
| nesRdata | National Eutrophication Survey Data |
| NestedCategBayesImpute | Modeling, Imputing and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations |
| nestedcv | Nested Cross-Validation with 'glmnet' and 'caret' |
| NestedMenu | A Nested Menu Widget for 'Shiny' Applications |
| nestfs | Cross-Validated (Nested) Forward Selection |
| nestr | Build Nesting or Hierarchical Structures |
| net4pg | Handle Ambiguity of Protein Identifications from Shotgun Proteomics |
| netassoc | Inference of Species Associations from Co-Occurrence Data |
| netchain | Inferring Causal Effects on Collective Outcomes under Interference |
| netClust | Model-Based Clustering of Network Data |
| NetCluster | Clustering for networks |
| netcmc | Spatio-Network Generalised Linear Mixed Models for Areal Unit and Network Data |
| netCoin | Interactive Analytic Networks |
| netcom | NETwork COMparison Inference |
| netcontrol | Control Theory Methods for Networks |
| NetCoupler | Inference of Causal Links Between a Network and an External Variable |
| NetDA | Network-Based Discriminant Analysis Subject to Multi-Label Classes |
| netdiffuseR | Analysis of Diffusion and Contagion Processes on Networks |
| NetExplorer | Network Explorer |
| NetFACS | Network Applications to Facial Communication Data |
| netgen | Network Generator for Combinatorial Graph Problems |
| netgsa | Network-Based Gene Set Analysis |
| netgwas | Network-Based Genome Wide Association Studies |
| netie | Antigen T Cell Interaction Estimation |
| NetIndices | Estimating Network Indices, Including Trophic Structure of Foodwebs in R |
| netjack | Tools for Working with Samples of Networks |
| NetLogoR | Build and Run Spatially Explicit Agent-Based Models |
| netmap | Represent Network Objects on a Map |
| netmeta | Network Meta-Analysis using Frequentist Methods |
| netmhc2pan | Interface to 'NetMHCIIpan' |
| NetMix | Dynamic Mixed-Membership Network Regression Model |
| NetOrigin | Origin Estimation for Propagation Processes on Complex Networks |
| netplot | Beautiful Graph Drawing |
| netrankr | Analyzing Partial Rankings in Networks |
| netregR | Regression of Network Responses |
| NetRep | Permutation Testing Network Module Preservation Across Datasets |
| netropy | Statistical Entropy Analysis of Network Data |
| nets | Network Estimation for Time Series |
| NetSci | Calculates Basic Network Measures Commonly Used in Network Medicine |
| netseg | Measures of Network Segregation and Homophily |
| netSEM | Network Structural Equation Modeling |
| NetSimR | Actuarial Functions for Non-Life Insurance Modelling |
| netstat | Retrieve Network Statistics Including Available TCP Ports |
| NetSwan | Network Strengths and Weaknesses Analysis |
| nettskjemar | Connect to the 'nettskjema.no' API of the University of Oslo |
| NetWeaver | Graphic Presentation of Complex Genomic and Network Data Analysis |
| network | Classes for Relational Data |
| networkABC | Network Reverse Engineering with Approximate Bayesian Computation |
| NetworkChange | Bayesian Package for Network Changepoint Analysis |
| NetworkComparisonTest | Statistical Comparison of Two Networks Based on Three Invariance Measures |
| networkD3 | D3 JavaScript Network Graphs from R |
| NetworkDistance | Distance Measures for Networks |
| networkDynamic | Dynamic Extensions for Network Objects |
| networkDynamicData | Dynamic (Longitudinal) Network Datasets |
| NetworkExtinction | Extinction Simulation in Food Webs |
| networkGen | Network Maze Generator |
| NetworkInference | Inferring Latent Diffusion Networks |
| networkR | Network Analysis and Visualization |
| networkreporting | Tools for using Network Reporting Estimators |
| NetworkRiskMeasures | Risk Measures for (Financial) Networks |
| networkscaleup | Network Scale-Up Models for Aggregated Relational Data |
| NetworkToolbox | Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis |
| networktools | Tools for Identifying Important Nodes in Networks |
| networktree | Recursive Partitioning of Network Models |
| neuralnet | Training of Neural Networks |
| NeuralNetTools | Visualization and Analysis Tools for Neural Networks |
| NeuralSens | Sensitivity Analysis of Neural Networks |
| neuroblastoma | Neuroblastoma copy number profiles |
| neurocInstall | 'Neuroconductor' Installer |
| neurohcp | Human 'Connectome' Project Interface |
| neuroim | Data Structures and Handling for Neuroimaging Data |
| neuromplex | Neural Multiplexing Analysis |
| neutralitytestr | Test for a Neutral Evolutionary Model in Cancer Sequencing Data |
| neverhpfilter | An Alternative to the Hodrick-Prescott Filter |
| Newdistns | Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions |
| newFocus | True Discovery Guarantee by Combining Partial Closed Testings |
| NewmanOmics | Extending the Newman Studentized Range Statistic to Transcriptomics |
| newsanchor | Client for the News API |
| newscatcheR | Programmatically Collect Normalized News from (Almost) Any Website |
| newsmap | Semi-Supervised Model for Geographical Document Classification |
| newsmd | Creation of NEWS.md File |
| newTestSurvRec | Statistical Tests to Compare Curves with Recurrent Events |
| nextGenShinyApps | Advanced Tools for Building the Next Generation of 'Shiny' Applications and Dashboards |
| nFactors | Parallel Analysis and Other Non Graphical Solutions to the Cattell Scree Test |
| NFCP | N-Factor Commodity Pricing Through Term Structure Estimation |
| nfer | Event Stream Abstraction using Interval Logic |
| nfl4th | Functions to Calculate Optimal Fourth Down Decisions in the National Football League |
| nflfastR | Functions to Efficiently Access NFL Play by Play Data |
| nflplotR | NFL Logo Plots in 'ggplot2' |
| nflreadr | Download 'nflverse' Data |
| nflseedR | Functions to Efficiently Simulate and Evaluate NFL Seasons |
| NFLSimulatoR | Simulating Plays and Drives in the NFL |
| nflverse | Easily Install and Load the 'nflverse' |
| nftbart | Nonparametric Failure Time Bayesian Additive Regression Trees |
| NFWdist | The Standard Distribution Functions for the 3D NFW Profile |
| ngboostForecast | Probabilistic Time Series Forecasting |
| NGBVS | Bayesian Variable Selection for SNP Data using Normal-Gamma |
| NGLVieweR | Interactive 3D Visualization of Molecular Structures |
| ngram | Fast n-Gram 'Tokenization' |
| ngramr | Retrieve and Plot Google n-Gram Data |
| ngramrr | A Simple General Purpose N-Gram Tokenizer |
| ngspatial | Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data |
| NGSSEML | Non-Gaussian State-Space with Exact Marginal Likelihood |
| NHANES | Data from the US National Health and Nutrition Examination Study |
| nhanesA | NHANES Data Retrieval |
| nhdplusTools | NHDPlus Tools |
| nhdR | Tools for Working with the National Hydrography Dataset |
| nhlapi | A Minimum-Dependency 'R' Interface to the 'NHL' API |
| NHLData | Scores for Every Season Since the Founding of the NHL in 1917 |
| nhlscrape | Scrapes the 'NHL' API for Statistical Analysis |
| nhm | Non-Homogeneous Markov and Hidden Markov Multistate Models |
| NHMM | Bayesian Non-Homogeneous Markov and Mixture Models for Multiple Time Series |
| NHMSAR | Non-Homogeneous Markov Switching Autoregressive Models |
| NHPoisson | Modelling and Validation of Non Homogeneous Poisson Processes |
| nhs.predict | Breast Cancer Survival and Therapy Benefits |
| NHSDataDictionaRy | NHS Data Dictionary Toolset for NHS Lookups |
| nhsnumber | Tools for Working with NHS Number Checksums |
| NHSRdatasets | NHS and Healthcare-Related Data for Education and Training |
| NHSRplotthedots | Draw XmR Charts for NHSE/I 'Making Data Count' Programme |
| nhstplot | Plot Null Hypothesis Significance Tests |
| niaidMI | Markov Model Multiple Imputation for NIAID OS |
| nic | Nature Inspired Colours |
| nice | Get or Set UNIX Niceness |
| NicheBarcoding | Niche-model-Based Species Identification |
| nicheROVER | Niche Region and Niche Overlap Metrics for Multidimensional Ecological Niches |
| nifti.io | Read and Write NIfTI Files |
| NightDay | Night and Day Boundary Plot Function |
| nightmares | Common Analysis with Remote Sensing Data |
| nilde | Nonnegative Integer Solutions of Linear Diophantine Equations with Applications |
| NiLeDAM | Monazite Dating for the NiLeDAM Team |
| nima | Nima Hejazi's R Toolbox |
| NIMAA | Nominal Data Mining Analysis |
| nimble | MCMC, Particle Filtering, and Programmable Hierarchical Modeling |
| nimbleAPT | Adaptive Parallel Tempering for 'NIMBLE' |
| nimbleCarbon | Bayesian Analyses of Radiocarbon Dates with NIMBLE |
| nimbleEcology | Distributions for Ecological Models in 'nimble' |
| nimbleNoBounds | Transformed Distributions for Improved MCMC Efficiency |
| nimbleSCR | Spatial Capture-Recapture (SCR) Methods Using 'nimble' |
| nimbleSMC | Sequential Monte Carlo Methods for 'nimble' |
| nipals | Principal Components Analysis using NIPALS or Weighted EMPCA, with Gram-Schmidt Orthogonalization |
| nipnTK | National Information Platforms for Nutrition Anthropometric Data Toolkit |
| NipponMap | Japanese Map Data and Functions |
| NIPTeR | Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing |
| NIRStat | Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data |
| NISTnls | Nonlinear least squares examples from NIST |
| NISTunits | Fundamental Physical Constants and Unit Conversions from NIST |
| NITPicker | Finds the Best Subset of Points to Sample |
| NitrogenUptake2016 | Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata |
| nivm | Noninferiority Tests with Variable Margins |
| nixmass | Snow Water Equivalent Modeling with the 'Delta.snow' Model and Empirical Regression Models |
| njgeo | Tools for Geocoding Addresses in New Jersey using the 'NJOGIS' API |
| nJira | SQL Like Query Interface for 'Jira' |
| njtr1 | Download, Analyze & Clean New Jersey Car Crash Data |
| nlaR | Interface to the National Lakes Assessment |
| NlcOptim | Solve Nonlinear Optimization with Nonlinear Constraints |
| nlcv | Nested Loop Cross Validation |
| nleqslv | Solve Systems of Nonlinear Equations |
| NlinTS | Models for Non Linear Causality Detection in Time Series |
| nlist | Lists of Numeric Atomic Objects |
| nlme | Linear and Nonlinear Mixed Effects Models |
| nlmeU | Datasets and Utility Functions Enhancing Functionality of 'nlme' Package |
| nlmeVPC | Visual Model Checking for Nonlinear Mixed Effect Model |
| nlmixr | Nonlinear Mixed Effects Models in Population PK/PD |
| nlmixr2 | Nonlinear Mixed Effects Models in Population PK/PD |
| nlmixr2data | Nonlinear Mixed Effects Models in Population PK/PD, Data |
| nlmixr2est | Nonlinear Mixed Effects Models in Population PK/PD, Estimation Routines |
| nlmixr2extra | Nonlinear Mixed Effects Models in Population PK/PD, Extra Support Functions |
| nlmixr2plot | Nonlinear Mixed Effects Models in Population PK/PD, Plot Functions |
| nlmm | Generalized Laplace Mixed-Effects Models |
| nlmrt | Functions for Nonlinear Least Squares Solutions |
| nlMS | Non-Linear Model Selection |
| nlnet | Nonlinear Network, Clustering, and Variable Selection Based on DCOL |
| nloptr | R Interface to NLopt |
| NLP | Natural Language Processing Infrastructure |
| NLPclient | Stanford 'CoreNLP' Annotation Client |
| nlpred | Estimators of Non-Linear Cross-Validated Risks Optimized for Small Samples |
| NLPutils | Natural Language Processing Utilities |
| nlraa | Nonlinear Regression for Agricultural Applications |
| nlreg | Higher Order Inference for Nonlinear Heteroscedastic Models |
| NLRoot | searching for the root of equation |
| nlrr | Non-Linear Relative Risk Estimation and Plotting |
| nlrx | Setup, Run and Analyze 'NetLogo' Model Simulations from 'R' via 'XML' |
| nls.multstart | Robust Non-Linear Regression using AIC Scores |
| nls2 | Non-Linear Regression with Brute Force |
| nlsem | Fitting Structural Equation Mixture Models |
| nlshelper | Convenient Functions for Non-Linear Regression |
| nlshrink | Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices |
| nlsic | Non Linear Least Squares with Inequality Constraints |
| nlsMicrobio | Nonlinear Regression in Predictive Microbiology |
| nlsmsn | Fitting Nonlinear Models with Scale Mixture of Skew-Normal Distributions |
| nlsr | Functions for Nonlinear Least Squares Solutions |
| nlstac | An R Package for Fitting Separable Nonlinear Models |
| nlstools | Tools for Nonlinear Regression Analysis |
| nlt | A Nondecimated Lifting Transform for Signal Denoising |
| nltm | Non-Linear Transformation Models |
| nlts | Nonlinear Time Series Analysis |
| nLTT | Calculate the NLTT Statistic |
| nlWaldTest | Wald Test of Nonlinear Restrictions and Nonlinear CI |
| nmadb | Network Meta-Analysis Database API |
| NMADiagT | Network Meta-Analysis of Multiple Diagnostic Tests |
| nmaINLA | Network Meta-Analysis using Integrated Nested Laplace Approximations |
| NMAoutlier | Detecting Outliers in Network Meta-Analysis |
| nmaplateplot | The Plate Plot for Network Meta-Analysis Results |
| nmarank | Complex Hierarchy Questions in Network Meta-Analysis |
| nmathresh | Thresholds and Invariant Intervals for Network Meta-Analysis |
| NMdata | Preparation, Checking and Post-Processing Data for PK/PD Modeling |
| NMF | Algorithms and Framework for Nonnegative Matrix Factorization (NMF) |
| NMFN | Non-Negative Matrix Factorization |
| NMI | Normalized Mutual Information of Community Structure in Network |
| Nmisc | Miscellaneous Functions Used at 'Numeract LLC' |
| Nmix | Bayesian Inference on Univariate Normal Mixtures |
| nmixgof | Goodness of Fit Checks for Binomial N-Mixture Models |
| NMMIPW | Inverse Probability Weighting under Non-Monotone Missing |
| NMOF | Numerical Methods and Optimization in Finance |
| NMproject | Script Based 'NONMEM' Model Development |
| nmslibR | Non Metric Space (Approximate) Library |
| NMVANOVA | Novice Model Variation ANOVA |
| nmw | Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics |
| nna | Nearest-Neighbor Analysis |
| NNbenchmark | Datasets and Functions to Benchmark Neural Network Packages |
| nnet | Feed-Forward Neural Networks and Multinomial Log-Linear Models |
| nnfor | Time Series Forecasting with Neural Networks |
| nnGarrote | Non-Negative Garrote Estimation with Penalized Initial Estimators |
| nngeo | k-Nearest Neighbor Join for Spatial Data |
| nnlasso | Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models |
| nnlib2Rcpp | A Tool for Creating Custom Neural Networks in C++ and using Them in R |
| nnls | The Lawson-Hanson algorithm for non-negative least squares (NNLS) |
| NNMIS | Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates |
| NNS | Nonlinear Nonparametric Statistics |
| nnspat | Nearest Neighbor Methods for Spatial Patterns |
| nnt | The Number Needed to Treat (NNT) for Survival Endpoint |
| NNTbiomarker | Calculate Design Parameters for Biomarker Validation Studies |
| nnTensor | Non-Negative Tensor Decomposition |
| nntrf | Supervised Data Transformation by Means of Neural Network Hidden Layer |
| NO.PING.PONG | Incorporating Previous Findings When Evaluating New Data |
| noaaoceans | Collect Ocean Data from NOAA |
| noaastormevents | Explore NOAA Storm Events Database |
| noah | Create Unique Pseudonymous Animal Names |
| NobBS | Nowcasting by Bayesian Smoothing |
| noctua | Connect to 'AWS Athena' using R 'AWS SDK' 'paws' ('DBI' Interface) |
| nodbi | 'NoSQL' Database Connector |
| node2vec | Algorithmic Framework for Representational Learning on Graphs |
| nodiv | Compares the Distribution of Sister Clades Through a Phylogeny |
| nofrills | Low-Cost Anonymous Functions |
| noia | Implementation of the Natural and Orthogonal InterAction (NOIA) model |
| noise | Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data |
| noisyCE2 | Cross-Entropy Optimisation of Noisy Functions |
| noisyr | Noise Quantification in High Throughput Sequencing Output |
| noisySBM | Noisy Stochastic Block Mode: Graph Inference by Multiple Testing |
| nombre | Number Names |
| nomclust | Hierarchical Cluster Analysis of Nominal Data |
| nominatimlite | Interface with 'Nominatim' API Service |
| nomisr | Access 'Nomis' UK Labour Market Data |
| nomnoml | Sassy 'UML' Diagrams |
| nomogramEx | Extract Equations from a Nomogram |
| nomogramFormula | Calculate Total Points and Probabilities for Nomogram |
| nomordR | Randomization Test for Sequences of Nominal Values |
| NonCompart | Noncompartmental Analysis for Pharmacokinetic Data |
| noncompliance | Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model |
| noncomplyR | Bayesian Analysis of Randomized Experiments with Non-Compliance |
| nonet | Weighted Average Ensemble without Training Labels |
| nonlinearICP | Invariant Causal Prediction for Nonlinear Models |
| NonlinearTSA | Nonlinear Time Series Analysis |
| nonlinearTseries | Nonlinear Time Series Analysis |
| nonmem2R | Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots |
| nonmemica | Create and Evaluate NONMEM Models in a Project Context |
| nonneg.cg | Non-Negative Conjugate-Gradient Minimizer |
| nonnest2 | Tests of Non-Nested Models |
| NonNorMvtDist | Multivariate Lomax (Pareto Type II) and Its Related Distributions |
| nonpar | A Collection of Nonparametric Hypothesis Tests |
| nonparaeff | Nonparametric Methods for Measuring Efficiency and Productivity |
| nonparametric.bayes | Project Code - Nonparametric Bayes |
| Nonpareil | Metagenome Coverage Estimation and Projections for 'Nonpareil' |
| NonParRolCor | a Non-Parametric Statistical Significance Test for Rolling Correlation |
| NonProbEst | Estimation in Nonprobability Sampling |
| nopaco | Non-Parametric Concordance Coefficient |
| nopp | Nash Optimal Party Positions |
| nor1mix | Normal aka Gaussian (1-d) Mixture Models (S3 Classes and Methods) |
| nord | Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes for 'ggplot2' |
| nordklimdata1 | Dataset for Climate Analysis with Data from the Nordic Region |
| norgeo | Track Geo Code Changes in all Regional Granularity in Norway |
| norm | Analysis of Multivariate Normal Datasets with Missing Values |
| norm2 | Analysis of Incomplete Multivariate Data under a Normal Model |
| NORMA | Builds General Noise SVRs |
| NormalityAssessment | A Graphical User Interface for Testing Normality Visually |
| normalizeH | Normalize Hadamard Matrix |
| NormalLaplace | The Normal Laplace Distribution |
| normalp | Routines for Exponential Power Distribution |
| normalr | Normalisation of Multiple Variables in Large-Scale Datasets |
| NormExpression | Normalize Gene Expression Data using Evaluated Methods |
| NormPsy | Normalisation of Psychometric Tests |
| nortest | Tests for Normality |
| nortestARMA | Neyman Smooth Tests of Normality for the Errors of ARMA Models |
| nortsTest | Assessing Normality of Stationary Process |
| nose | nose Package for R |
| nosoi | A Forward Agent-Based Transmission Chain Simulator |
| NostalgiR | Advanced Text-Based Plots |
| not | Narrowest-Over-Threshold Change-Point Detection |
| notifyme | Send Alerts to your Cellphone and Phillips Hue Lights |
| NovelDistns | Computes PDF, CDF, Quantile, Random Numbers and Measures of Inference for 3 General Families of Distributions |
| novelforestSG | Data for Lai et al. (2021) Appl. Veg. Sci. |
| noweb | The 'noweb' System for R |
| Nozzle.R1 | Nozzle Reports |
| np | Nonparametric Kernel Smoothing Methods for Mixed Data Types |
| nparACT | Non-Parametric Measures of Actigraphy Data |
| nparcomp | Multiple Comparisons and Simultaneous Confidence Intervals |
| nparLD | Nonparametric Analysis of Longitudinal Data in Factorial Experiments |
| nparMD | Nonparametric Analysis of Multivariate Data in Factorial Designs |
| nparsurv | Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data |
| NPBayesImputeCat | Non-Parametric Bayesian Multiple Imputation for Categorical Data |
| npbr | Nonparametric Boundary Regression |
| NPCD | Nonparametric Methods for Cognitive Diagnosis |
| NPCirc | Nonparametric Circular Methods |
| npcopTest | Non Parametric Test for Detecting Changes in the Copula |
| npcp | Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations |
| npcs | Neyman-Pearson Classification via Cost-Sensitive Learning |
| npcure | Nonparametric Estimation in Mixture Cure Models |
| npde | Normalised Prediction Distribution Errors for Nonlinear Mixed-Effect Models |
| npExact | Exact Nonparametric Hypothesis Tests for the Mean, Variance and Stochastic Inequality |
| NPflow | Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data |
| nph | Planning and Analysing Survival Studies under Non-Proportional Hazards |
| NPHazardRate | Nonparametric Hazard Rate Estimation |
| NPHMC | Sample Size Calculation for the Proportional Hazards Mixture Cure Model |
| nphPower | Sample Size Calculation under Non-Proportional Hazards |
| npIntFactRep | Nonparametric Interaction Tests for Factorial Designs with Repeated Measures |
| NPIstats | Nonparametric Predictive Inference |
| nplplot | Plotting Linkage and Association Results |
| nplr | N-Parameter Logistic Regression |
| nplyr | A Grammar of Nested Data Manipulation |
| npm | Interact with 'NPM' |
| npmlda | Nonparametric Models for Longitudinal Data |
| NPMLEcmprsk | Type-Specific Failure Rate and Hazard Rate on Competing Risks Data |
| npmlreg | Nonparametric Maximum Likelihood Estimation for Random Effect Models |
| npmr | Nuclear Penalized Multinomial Regression |
| npmv | Nonparametric Comparison of Multivariate Samples |
| npordtests | Nonparametric Tests for Equality of Location Against Ordered Alternatives |
| NPP | Normalized Power Prior Bayesian Analysis |
| nppbib | Nonparametric Partially-Balanced Incomplete Block Design Analysis |
| npphen | Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data |
| nprcgenekeepr | Genetic Tools for Colony Management |
| NPRED | Predictor Identifier: Nonparametric Prediction |
| npreg | Nonparametric Regression via Smoothing Splines |
| npregderiv | Nonparametric Estimation of the Derivatives of a Regression Function |
| npregfast | Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions |
| nprobust | Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation |
| nproc | Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves |
| npROCRegression | Kernel-Based Nonparametric ROC Regression Modelling |
| nprotreg | Nonparametric Rotations for Sphere-Sphere Regression |
| npsf | Nonparametric and Stochastic Efficiency and Productivity Analysis |
| npsr | Validate Instrumental Variables using NPS |
| npsurv | Nonparametric Survival Analysis |
| npsurvSS | Sample Size and Power Calculation for Common Non-Parametric Tests in Survival Analysis |
| nptest | Nonparametric Bootstrap and Permutation Tests |
| npwbs | Nonparametric Multiple Change Point Detection Using WBS |
| NRejections | Metrics for Multiple Testing with Correlated Outcomes |
| nricens | NRI for Risk Prediction Models with Time to Event and Binary Response Data |
| NSAE | Nonstationary Small Area Estimation |
| nsapi | Connect to the NS (Dutch Railways) API |
| nsarfima | Methods for Fitting and Simulating Non-Stationary ARFIMA Models |
| nscancor | Non-Negative and Sparse CCA |
| NScluster | Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models |
| nsdr | Nonlinear Sufficient Dimension Reduction |
| nse2r | Fetch Data from 'National Stock Exchange (India)' |
| nser | Bhavcopy and Live Market Data from National Stock Exchange (NSE) & Bombay Stock Exchange (BSE) India for Equities and Equity Derivatives (F&O) |
| nseval | Tools for Lazy and Non-Standard Evaluation |
| nsga2R | Elitist Non-Dominated Sorting Genetic Algorithm |
| nsga3 | An Implementation of Non-Dominated Sorting Genetic Algorithm III for Feature Selection |
| NSM3 | Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition |
| nsm3data | Datasets to Accompany Hollander, Wolfe, and Chicken NSM3 |
| NSO1212 | National Statistical Office of Mongolia's Open Data API Handler |
| nsp | Inference for Multiple Change-Points in Linear Models |
| nspmix | Nonparametric and Semiparametric Mixture Estimation |
| nsprcomp | Non-Negative and Sparse PCA |
| nsRFA | Non-Supervised Regional Frequency Analysis |
| nsROC | Non-Standard ROC Curve Analysis |
| nsrr | Interface to National Sleep Research Resource |
| NST | Normalized Stochasticity Ratio |
| nsyllable | Count Syllables in Character Vectors |
| NTS | Nonlinear Time Series Analysis |
| nucim | Nucleome Imaging Toolbox |
| NUCOMBog | NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate |
| nullabor | Tools for Graphical Inference |
| numberofalleles | Compute the Probability Distribution of the Number of Alleles in a DNA Mixture |
| numbers | Number-Theoretic Functions |
| numbersBR | Validate, Compare and Format Identification Numbers from Brazil |
| numDeriv | Accurate Numerical Derivatives |
| Numero | Statistical Framework to Define Subgroups in Complex Datasets |
| numform | Tools to Format Numbers for Publication |
| numGen | Number Series Generator |
| numKM | Create a Kaplan-Meier Plot with Numbers at Risk |
| numOSL | Numeric Routines for Optically Stimulated Luminescence Dating |
| NutrienTrackeR | Food Composition Information and Dietary Assessment |
| nutriNetwork | Structure Learning with Copula Graphical Model |
| NVCSSL | Nonparametric Varying Coefficient Spike-and-Slab Lasso |
| nvctr | The n-vector Approach to Geographical Position Calculations using an Ellipsoidal Model of Earth |
| nVennR | Create n-Dimensional, Quasi-Proportional Venn Diagrams |
| nvmix | Multivariate Normal Variance Mixtures |
| nycflights13 | Flights that Departed NYC in 2013 |
| nzelect | New Zealand Election Data |
| nzffdr | Import, Clean and Update Data from the New Zealand Freshwater Fish Database |
| nzilbb.labbcat | Accessing Data Stored in 'LaBB-CAT' Instances |
| nzpullover | Driving Offences in New Zealand Between 2009 and 2016 |
| o2geosocial | Reconstruction of Transmission Chains from Surveillance Data |
| o2plsda | Multiomics Data Integration |
| oaColors | OpenAnalytics Colors Package |
| oai | General Purpose 'Oai-PMH' Services Client |
| OAIHarvester | Harvest Metadata Using OAI-PMH Version 2.0 |
| oaPlots | OpenAnalytics Plots Package |
| oaqc | Computation of the Orbit-Aware Quad Census |
| Oarray | Arrays with Arbitrary Offsets |
| OasisR | Outright Tool for the Analysis of Spatial Inequalities and Segregation |
| oaxaca | Blinder-Oaxaca Decomposition |
| obAnalytics | Limit Order Book Analytics |
| OBASpatial | Objective Bayesian Analysis for Spatial Regression Models |
| obfuscatoR | Obfuscation Game Designs |
| OBIC | Calculate the Open Bodem Index (OBI) Score |
| objectProperties | A Factory of Self-Describing Properties |
| objectremover | 'RStudio' Addin for Removing Objects from the Global Environment Based on Patterns and Object Type |
| objectSignals | Observer Pattern for S4 |
| OBL | Optimum Block Length |
| obliqueRSF | Oblique Random Forests for Right-Censored Time-to-Event Data |
| OBMbpkg | Estimate the Population Size for the Mb Capture-Recapture Model |
| observer | Observe and Check your Data |
| OBsMD | Objective Bayesian Model Discrimination in Follow-Up Designs |
| obsSens | Sensitivity Analysis for Observational Studies |
| OCA | Optimal Capital Allocations |
| occ | Estimates PET Neuroreceptor Occupancies |
| occCite | Querying and Managing Large Biodiversity Occurrence Datasets |
| occupancy | Probability Functions for Occupancy Distributions |
| ocd | High-Dimensional Multiscale Online Changepoint Detection |
| oce | Analysis of Oceanographic Data |
| oceanic | Location Identify Tool |
| oceanis | Cartography for Statistical Analysis |
| oceanmap | A Plotting Toolbox for 2D Oceanographic Data |
| OceanView | Visualisation of Oceanographic Data and Model Output |
| oceanwaves | Ocean Wave Statistics |
| ocedata | Oceanographic Data Sets for 'oce' Package |
| ockc | Order Constrained Solutions in k-Means Clustering |
| oclust | Gaussian Model-Based Clustering with Outliers |
| OCNet | Optimal Channel Networks |
| ocomposition | Regression for Rank-Indexed Compositional Data |
| ocp | Bayesian Online Changepoint Detection |
| ocs4R | Interface to Open Collaboration Services (OCS) REST API |
| OCSdata | Download Data from the 'Open Case Studies' Repository |
| od | Manipulate and Map Origin-Destination Data |
| ODataQuery | Querying on 'OData' |
| ODB | Open Document Databases (.odb) Management |
| odbc | Connect to ODBC Compatible Databases (using the DBI Interface) |
| odds.converter | Betting Odds Conversion |
| odds.n.ends | Odds Ratios, Contingency Table, and Model Significance from a Generalized Linear Model Object |
| oddsapiR | Access Live Sports Odds from the Odds API |
| OddsPlotty | Odds Plot to Visualise a Logistic Regression Model |
| oddsratio | Odds Ratio Calculation for GAM(M)s & GLM(M)s |
| oddstream | Outlier Detection in Data Streams |
| odeGUTS | Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code |
| odeintr | C++ ODE Solvers Compiled on-Demand |
| ODEnetwork | Network of Differential Equations |
| ODEsensitivity | Sensitivity Analysis of Ordinary Differential Equations |
| odin | ODE Generation and Integration |
| odk | Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame |
| ODMeans | OD-Means: k-Means for Origin-Destination |
| odns | Access Scottish Health and Social Care Open Data |
| odpc | One-Sided Dynamic Principal Components |
| odr | Optimal Design and Statistical Power for Multilevel Experiments |
| ODS | Statistical Methods for Outcome-Dependent Sampling Designs |
| OECD | Search and Extract Data from the OECD |
| OEFPIL | Optimal Estimation of Function Parameters by Iterated Linearization |
| oem | Orthogonalizing EM: Penalized Regression for Big Tall Data |
| oenb | Tools for the OeNB Data Web Service |
| OenoKPM | Modeling the Kinetics of CO2 Production in Alcoholic Fermentation |
| officedown | Enhanced 'R Markdown' Format for 'Word' and 'PowerPoint' |
| officer | Manipulation of Microsoft Word and PowerPoint Documents |
| offlineChange | Detect Multiple Change Points from Time Series |
| ofGEM | A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data |
| OGI | Objective General Index |
| oglmx | Estimation of Ordered Generalized Linear Models |
| ohenery | Modeling of Ordinal Random Variables via Softmax Regression |
| Ohit | OGA+HDIC+Trim and High-Dimensional Linear Regression Models |
| ohoegdm | Ordinal Higher-Order Exploratory General Diagnostic Model for Polytomous Data |
| OHPL | Ordered Homogeneity Pursuit Lasso for Group Variable Selection |
| ohtadstats | Tomoka Ohta D Statistics |
| oii | Crosstab and Statistical Tests for OII MSc Stats Course |
| ojsr | Crawler and Data Scraper for Open Journal System ('OJS') |
| OkNNE | A k-Nearest Neighbours Ensemble via Optimal Model Selection for Regression |
| olctools | Open Location Code Handling in R |
| OlinkAnalyze | Facilitate Analysis of Proteomic Data from Olink |
| ollg | Computes some Measures of OLL-G Family of Distributions |
| ollggamma | Odd Log-Logistic Generalized Gamma Probability Distribution |
| olr | Optimal Linear Regression |
| olsrr | Tools for Building OLS Regression Models |
| OmegaG | Omega-Generic: Composite Reliability of Multidimensional Measures |
| OmicInt | Omics Network Exploration |
| OmicKriging | Poly-Omic Prediction of Complex TRaits |
| OmicNavigator | Open-Source Software for 'Omic' Data Analysis and Visualization |
| omics | '–omics' Data Analysis Toolbox |
| OmicsPLS | Data Integration with Two-Way Orthogonal Partial Least Squares |
| omicwas | Cell-Type-Specific Association Testing in Bulk Omics Experiments |
| Omisc | Univariate Bootstrapping and Other Things |
| omnibus | Helper Tools for Managing Data, Dates, Missing Values, and Text |
| OmnibusFisher | A Modified Fisher’s Method to Test Overall Gene-Level Effect |
| omopr | OMOP CDM Databases using the Tidyverse |
| ompr | Model and Solve Mixed Integer Linear Programs |
| ompr.roi | A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI') |
| omsvg | Build and Transform 'SVG' Objects |
| omu | A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection |
| onadata | Data Sets for Keith McNulty's Handbook of Graphs and Networks in People Analytics |
| OnAge | Test of Between-Group Differences in the Onset of Senescence |
| onbabynames | Names Given to Babies in Ontario Between 1917 and 2018 |
| onbrand | Templated Reporting Workflows in Word and PowerPoint |
| onc.api | Oceans 2.0 API Client Library |
| OncoBayes2 | Bayesian Logistic Regression for Oncology Dose-Escalation Trials |
| oncoPredict | Drug and Biomarker Discovery |
| Oncotree | Estimating Oncogenetic Trees |
| oncrawlR | Machine Learning for S.E.O |
| ondisc | Fast, Universal, and Intuitive Computing on Large-Scale Single-Cell Data |
| oneclust | Maximum Homogeneity Clustering for Univariate Data |
| onehot | Fast Onehot Encoding for Data.frames |
| onelogin | Interact with the 'OneLogin' API |
| onemap | Construction of Genetic Maps in Experimental Crosses |
| onemapsgapi | R Wrapper for the 'OneMap.Sg API' |
| onepass | 1password Credential Retrieval |
| OneR | One Rule Machine Learning Classification Algorithm with Enhancements |
| OneSampleMR | One Sample Mendelian Randomization and Instrumental Variable Analyses |
| ONEST | Observers Needed to Evaluate Subjective Tests |
| OneStep | One-Step Estimation |
| ONETr | Efficient Authenticated Interaction with the O*NET API |
| onewaytests | One-Way Tests in Independent Groups Designs |
| onion | Octonions and Quaternions |
| onlineBcp | Online Bayesian Methods for Change Point Analysis |
| onlineCOV | Online Change Point Detection in High-Dimensional Covariance Structure |
| onlineforecast | Forecast Modelling for Online Applications |
| onlinePCA | Online Principal Component Analysis |
| onlineretail | Online Retail Dataset |
| onnx | R Interface to 'ONNX' |
| onpoint | Helper Functions for Point Pattern Analysis |
| onsr | Client for the 'ONS' API |
| ontoFAST | Interactive Annotation of Characters with Biological Ontologies |
| ontologyIndex | Functions for Reading Ontologies into R |
| ontologyPlot | Visualising Sets of Ontological Terms |
| ontologySimilarity | Calculating Ontological Similarities |
| OOBCurve | Out of Bag Learning Curve |
| OOI | Outside Option Index |
| oolong | Create Validation Tests for Automated Content Analysis |
| oompaBase | Class Unions, Matrix Operations, and Color Schemes for OOMPA |
| oompaData | Data to Illustrate OOMPA Algorithms |
| ooplah | Helper Functions for Class Object-Oriented Programming |
| oops | S3 Style Object Oriented Programming |
| OOR | Optimistic Optimization in R |
| OOS | Out-of-Sample Time Series Forecasting |
| oottest | Out-of-Treatment Testing |
| opa | An Implementation of Ordinal Pattern Analysis |
| opalr | 'Opal' Data Repository Client and 'DataSHIELD' Utils |
| OPC | The Online Principal Component Estimation Method |
| opdisDownsampling | Optimal Distribution Preserving Down-Sampling of Bio-Medical Data |
| OPDOE | Optimal Design of Experiments |
| openadds | Client to Access 'Openaddresses' Data |
| openai | R Wrapper for OpenAI API |
| openair | Tools for the Analysis of Air Pollution Data |
| openalexR | Getting Bibliographic Records from 'OpenAlex' Database Using 'DSL' API |
| openbankeR | R Client for Querying the UK 'Open Banking' ('Open Data') API |
| openblender | Request <https://openblender.io> API Services |
| opencage | Geocode with the OpenCage API |
| OpenCL | Interface allowing R to use OpenCL |
| opencpu | Producing and Reproducing Results |
| openCR | Open Population Capture-Recapture |
| opencv | Bindings to 'OpenCV' Computer Vision Library |
| opendatatoronto | Access the City of Toronto Open Data Portal |
| opendotaR | Interface for OpenDota API |
| openEBGM | EBGM Disproportionality Scores for Adverse Event Data Mining |
| openeo | Client Interface for 'openEO' Servers |
| OpenImageR | An Image Processing Toolkit |
| openintro | Data Sets and Supplemental Functions from 'OpenIntro' Textbooks and Labs |
| OpenLand | Quantitative Analysis and Visualization of LUCC |
| openmetrics | A 'Prometheus' Client for R Using the 'OpenMetrics' Format |
| OpenML | Open Machine Learning and Open Data Platform |
| openMSE | Easily Install and Load the 'openMSE' Packages |
| OpenMx | Extended Structural Equation Modelling |
| openNLP | Apache OpenNLP Tools Interface |
| openNLPdata | Apache OpenNLP Jars and Basic English Language Models |
| OpenRepGrid | Tools to Analyze Repertory Grid Data |
| OpenRepGrid.ic | Interpretive Clustering for Repertory Grids |
| openSkies | Retrieval, Analysis and Visualization of Air Traffic Data |
| OpenSpecy | Analyze, Process, Identify, and Share Raman and (FT)IR Spectra |
| openssl | Toolkit for Encryption, Signatures and Certificates Based on OpenSSL |
| openSTARS | An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS' |
| OpenStreetMap | Access to Open Street Map Raster Images |
| opentimsr | An Open-Source Loader for Bruker's timsTOF Data Files |
| OpenTreeChronograms | Open Tree of Life Chronograms |
| opentripplanner | Setup and connect to 'OpenTripPlanner' |
| openVA | Automated Method for Verbal Autopsy |
| openxlsx | Read, Write and Edit xlsx Files |
| opera | Online Prediction by Expert Aggregation |
| operator.tools | Utilities for Working with R's Operators |
| operators | Additional Binary Operators |
| opGMMassessment | Optimized Automated Gaussian Mixture Assessment |
| OPI | Open Perimetry Interface |
| opitools | Analyzing the Opinions in a Big Text Document |
| Opportunistic | Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network |
| oppr | Optimal Project Prioritization |
| Opt5PL | Optimal Designs for the 5-Parameter Logistic Model |
| optbdmaeAT | Optimal Block Designs for Two-Colour cDNA Microarray Experiments |
| optbin | Optimal Binning of Data |
| optBiomarker | Estimation of Optimal Number of Biomarkers for Two-Group Microarray Based Classifications at a Given Error Tolerance Level for Various Classification Rules |
| OptCirClust | Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible |
| optedr | Calculating Optimal and D-Augmented Designs |
| optextras | Tools to Support Optimization Possibly with Bounds and Masks |
| OptGS | Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes |
| OptHedging | Estimation of value and hedging strategy of call and put options |
| OptHoldoutSize | Estimation of Optimal Size for a Holdout Set for Updating a Predictive Score |
| opticskxi | OPTICS K-Xi Density-Based Clustering |
| opticut | Likelihood Based Optimal Partitioning and Indicator Species Analysis |
| optifunset | Set Options if Unset |
| optigrab | Command-Line Parsing for an R World |
| optim.functions | Standard Benchmark Optimization Functions |
| OptimalCutpoints | Computing Optimal Cutpoints in Diagnostic Tests |
| OptimalDesign | A Toolbox for Computing Efficient Designs of Experiments |
| optimall | Allocate Samples Among Strata |
| OptimalRerandExpDesigns | Optimal Rerandomization Experimental Designs |
| optimalThreshold | Bayesian Methods for Optimal Threshold Estimation |
| OptimalTiming | Optimal Timing Identification |
| OptimaRegion | Confidence Regions for Optima |
| optimbase | R Port of the 'Scilab' Optimbase Module |
| optimCheck | Graphical and Numerical Checks for Mode-Finding Routines |
| optimg | General-Purpose Gradient-Based Optimization |
| optimization | Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints |
| optimLanduse | Robust Land-Use Optimization |
| optimos.prime | Optimos Prime Helps Calculate Autoecological Data for Biological Species |
| optimParallel | Parallel Version of the L-BFGS-B Optimization Method |
| optimr | A Replacement and Extension of the 'optim' Function |
| optimsimplex | R Port of the 'Scilab' Optimsimplex Module |
| optimStrat | Choosing the Sample Strategy |
| optimus | Model Based Diagnostics for Multivariate Cluster Analysis |
| optimx | Expanded Replacement and Extension of the 'optim' Function |
| optinterv | Optimal Intervention |
| optional | Optional Types and Pattern Matching |
| OptionPricing | Option Pricing with Efficient Simulation Algorithms |
| optionstrat | Utilizes the Black-Scholes Option Pricing Model to Perform Strategic Option Analysis and Plot Option Strategies |
| optiscale | Optimal Scaling |
| optiSel | Optimum Contribution Selection and Population Genetics |
| optiSolve | Linear, Quadratic, and Rational Optimization |
| optistock | Determine Optimum Stocking Times Used in Fishery Enhancements |
| OptM | Estimating the Optimal Number of Migration Edges from 'Treemix' |
| optmatch | Functions for Optimal Matching |
| optparse | Command Line Option Parser |
| optpart | Optimal Partitioning of Similarity Relations |
| optR | Optimization Toolbox for Solving Linear Systems |
| optrcdmaeAT | Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments |
| OPTS | Optimization via Subsampling (OPTS) |
| OptSig | Optimal Level of Significance for Regression and Other Statistical Tests |
| OPTtesting | Optimal Testing |
| optweight | Targeted Stable Balancing Weights Using Optimization |
| opusminer | OPUS Miner Algorithm for Filtered Top-k Association Discovery |
| OpVaR | Statistical Methods for Modelling Operational Risk |
| ora | Convenient Tools for Working with Oracle Databases |
| orca | Computation of Graphlet Orbit Counts in Sparse Graphs |
| orclus | Subspace Clustering Based on Arbitrarily Oriented Projected Cluster Generation |
| ORCME | Order Restricted Clustering for Microarray Experiments |
| Orcs | Omnidirectional R Code Snippets |
| orcutt | Estimate Procedure in Case of First Order Autocorrelation |
| ordbetareg | Ordered Beta Regression Models with Brms |
| ordcrm | Likelihood-Based Continual Reassessment Method (CRM) Dose Finding Designs |
| ordDisp | Separating Location and Dispersion in Ordinal Regression Models |
| ORdensity | Identification of Differentially Expressed Genes |
| ordering | Test, Check, Verify, Investigate the Monotonic Properties of Vectors |
| orderly | Lightweight Reproducible Reporting |
| orders | Sampling from k-th Order Statistics of New Families of Distributions |
| orderstats | Efficiently Generates Random Order Statistic Variables |
| OrdFacReg | Least Squares, Logistic, and Cox-Regression with Ordered Predictors |
| ordiBreadth | Ordinated Diet Breadth |
| ordinal | Regression Models for Ordinal Data |
| ordinalbayes | Bayesian Ordinal Regression for High-Dimensional Data |
| ordinalClust | Ordinal Data Clustering, Co-Clustering and Classification |
| ordinalCont | Ordinal Regression Analysis for Continuous Scales |
| ordinalForest | Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables |
| ordinalgmifs | Ordinal Regression for High-Dimensional Data |
| ordinalLBM | Co-Clustering of Ordinal Data via Latent Continuous Random Variables |
| ordinalNet | Penalized Ordinal Regression |
| ordinalpattern | Tests Based on Ordinal Patterns |
| ordinalRR | Analysis of Repeatability and Reproducibility Studies with Ordinal Measurements |
| OrdMonReg | Compute least squares estimates of one bounded or two ordered isotonic regression curves |
| OrdNor | Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions |
| ordPens | Selection, Fusion, Smoothing and Principal Components Analysis for Ordinal Variables |
| ore | An R Interface to the Onigmo Regular Expression Library |
| oreo | Large Amplitude Oscillatory Shear (LAOS) |
| ores | Connector to the Objective Revision Evaluation Service (ORES) |
| orf | Ordered Random Forests |
| org | Organising Projects |
| OrgMassSpecR | Organic Mass Spectrometry |
| orgR | Analyse Text Files Created by Emacs' Org mode |
| orgutils | Helper Functions for Org Files |
| ORIClust | Order-Restricted Information Criterion-Based Clustering Algorithm |
| orientlib | Support for Orientation Data |
| origami | Generalized Framework for Cross-Validation |
| origin | Explicitly Qualifying Namespaces by Automatically Adding 'pkg::' to Functions |
| ORION | Ordinal Relations |
| ORKM | The Online Regularized K-Means Clustering Algorithm |
| orloca | Operations Research LOCational Analysis Models |
| orloca.es | Spanish version of orloca package. Modelos de localizacion en investigacion operativa |
| ormBigData | Fitting Semiparametric Cumulative Probability Models for Big Data |
| ormPlot | Advanced Plotting of Ordinal Regression Models |
| oro.dicom | Rigorous - DICOM Input / Output |
| oro.nifti | Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output |
| oro.pet | Rigorous - Positron Emission Tomography |
| orsifronts | Southern Ocean Frontal Distributions (Orsi) |
| orsk | Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information |
| orthoDr | Semi-Parametric Dimension Reduction Models Using Orthogonality Constrained Optimization |
| orthogonalsplinebasis | Orthogonal B-Spline Basis Functions |
| OrthoPanels | Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects |
| orthopolynom | Collection of Functions for Orthogonal and Orthonormal Polynomials |
| ORTSC | Connects to Google Cloud API for Label Detection |
| oRus | Operational Research User Stories |
| osc | Orthodromic Spatial Clustering |
| oscar | Optimal Subset Cardinality Regression (OSCAR) Models Using the L0-Pseudonorm |
| OscillatorGenerator | Generation of Customizable, Discretized Time Series of Oscillating Species |
| OSCV | One-Sided Cross-Validation |
| osd | Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data |
| osDesign | Design, Planning and Analysis of Observational Studies |
| OSDR | Finds an Optimal System of Distinct Representatives |
| osfr | Interface to the 'Open Science Framework' ('OSF') |
| oshka | Recursive Quoted Language Expansion |
| oskeyring | Raw System Credential Store Access from R |
| OSLdecomposition | Signal Component Analysis for Optically Stimulated Luminescence |
| osmdata | Import 'OpenStreetMap' Data as Simple Features or Spatial Objects |
| osmextract | Download and Import Open Street Map Data Extracts |
| osmose | Object Oriented Simulator of Marine Ecosystems |
| osmplotr | Bespoke Images of 'OpenStreetMap' Data |
| OSMscale | Add a Scale Bar to 'OpenStreetMap' Plots |
| OSNMTF | Orthogonal Sparse Non-Negative Matrix Tri-Factorization |
| osqp | Quadratic Programming Solver using the 'OSQP' Library |
| osrm | Interface Between R and the OpenStreetMap-Based Routing Service OSRM |
| osrmr | Wrapper for the 'OSRM' API |
| Ostats | O-Stats, or Pairwise Community-Level Niche Overlap Statistics |
| OSTE | Optimal Survival Trees Ensemble |
| ot | 'Open Tracing' |
| OTE | Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation |
| otinference | Inference for Optimal Transport |
| otp | One Time Password Generation and Verification |
| otpr | An R Wrapper for the 'OpenTripPlanner' REST API |
| OTrecod | Data Fusion using Optimal Transportation Theory |
| otrimle | Robust Model-Based Clustering |
| OTRselect | Variable Selection for Optimal Treatment Decision |
| otsad | Online Time Series Anomaly Detectors |
| ottr | An R Autograding Extension for Otter-Grader |
| ottrpal | Companion Tools for Open-Source Tools for Training Resources (OTTR) |
| otuSummary | Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres |
| OTUtable | North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions |
| ouch | Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses |
| outbreaker2 | Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data |
| outbreaks | A Collection of Disease Outbreak Data |
| outcomerate | AAPOR Survey Outcome Rates |
| outerbase | Outer Product Regression |
| outForest | Multivariate Outlier Detection and Replacement |
| outlierensembles | A Collection of Outlier Ensemble Algorithms |
| outliers | Tests for Outliers |
| OutliersO3 | Draws Overview of Outliers (O3) Plots |
| outliertree | Explainable Outlier Detection Through Decision Tree Conditioning |
| OutrankingTools | Functions for Solving Multiple-criteria Decision-making Problems |
| outreg | Regression Table for Publication |
| OUwie | Analysis of Evolutionary Rates in an OU Framework |
| overdisp | Overdispersion in Count Data Multiple Regression Analysis |
| overlap | Estimates of Coefficient of Overlapping for Animal Activity Patterns |
| overlapping | Estimation of Overlapping in Empirical Distributions |
| overlapptest | Test Overlapping of Polygons Against Random Rotation |
| overture | Tools for Writing MCMC |
| overviewR | Easily Extracting Information About Your Data |
| OVtool | Omitted Variable Tool |
| owd | Open Working Directory |
| owdbr | Open Welfare Data Brazil |
| OWEA | Optimal Weight Exchange Algorithm for Optimal Designs for Three Models |
| OwenQ | Owen Q-Function |
| owidR | A Package for Importing Data from Our World in Data |
| owmr | OpenWeatherMap API Wrapper |
| ows4R | Interface to OGC Web-Services (OWS) |
| ox | Shorthand if-Else |
| oxcAAR | Interface to 'OxCal' Radiocarbon Calibration |
| OxyBS | Processing of Oxy-Bisulfite Microarray Data |
| oysteR | Scans R Projects for Vulnerable Third Party Dependencies |
| oz | Plot the Australian Coastline and States |
| ozmaps | Australia Maps |
| pa | Performance Attribution for Equity Portfolios |
| PabonLasso | Pabon Lasso Graphs and Comparing Situations of a Unit in Two Different Times |
| PAC | Partition-Assisted Clustering and Multiple Alignments of Networks |
| pack | Convert values to/from raw vectors |
| packageDiff | Compare R Package Differences |
| packager | Create, Build and Maintain Packages |
| packageRank | Computation and Visualization of Package Download Counts and Percentiles |
| packagetrackr | Track R Package Downloads from RStudio's CRAN Mirror |
| packcircles | Circle Packing |
| packDAMipd | Decision Analysis Modelling Package with Parameters Estimation Ability from Individual Patient Level Data |
| packer | An Opinionated Framework for Using 'JavaScript' |
| packHV | A few Useful Functions for Statisticians |
| packMBPLSDA | Multi-Block Partial Least Squares Discriminant Analysis |
| packrat | A Dependency Management System for Projects and their R Package Dependencies |
| PACLasso | Penalized and Constrained Lasso Optimization |
| pacman | Package Management Tool |
| paco | Procrustes Application to Cophylogenetic Analysis |
| pacotest | Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas |
| pacs | Supplementary Tools for R Packages Developers |
| pacviz | Pac-Man Visualization Package |
| PACVr | Plastome Assembly Coverage Visualization |
| Pade | Padé Approximant Coefficients |
| padr | Quickly Get Datetime Data Ready for Analysis |
| pafdR | Book Companion for Processing and Analyzing Financial Data with R |
| PAFit | Generative Mechanism Estimation in Temporal Complex Networks |
| pafr | Read, Manipulate and Visualize 'Pairwise mApping Format' Data |
| pagedown | Paginate the HTML Output of R Markdown with CSS for Print |
| pagemap | Create Mini Map for Web Pages |
| pagenum | Put Page Numbers on Graphics |
| pageviews | An API Client for Wikimedia Traffic Data |
| pagoda2 | Single Cell Analysis and Differential Expression |
| pagoo | Analyze Bacterial Pangenomes in R with 'Pagoo' |
| PAGWAS | Pathway Analysis Methods for Genomewide Association Data |
| painbow | Use XKCD's "Painbow" Colormap in ggplot2 |
| painter | Creation and Manipulation of Color Palettes |
| paintmap | Plotting Paintmaps |
| PairedData | Paired Data Analysis |
| pairsD3 | D3 Scatterplot Matrices |
| PairViz | Visualization using Graph Traversal |
| pairwise | Rasch Model Parameters by Pairwise Algorithm |
| pairwiseCI | Confidence Intervals for Two Sample Comparisons |
| pak | Another Approach to Package Installation |
| PakPC2017 | Pakistan Population Census 2017 |
| PakPMICS2014Ch | Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014HH | Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014HL | Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan |
| PakPMICS2014Wm | Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018 | Multiple Indicator Cluster Survey (MICS) 2017-18 Data for Punjab, Pakistan |
| PakPMICS2018bh | Multiple Indicator Cluster Survey (MICS) 2017-18 Birth History of Children Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018fs | Multiple Indicator Cluster Survey (MICS) 2017-18 Children Age 5-17 Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018hh | Multiple Indicator Cluster Survey (MICS) 2017-18 Household Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018mm | Multiple Indicator Cluster Survey (MICS) 2017-18 Maternal Mortality Questionnaire Data for Punjab, Pakistan |
| PakPMICS2018mn | Multiple Indicator Cluster Survey (MICS) 2017-18 Men Questionnaire Data for Punjab, Pakistan |
| palaeoSig | Significance Tests for Palaeoenvironmental Reconstructions |
| palasso | Paired Lasso Regression |
| pald | Partitioned Local Depth for Community Structure in Data |
| paleobioDB | Download and Process Data from the Paleobiology Database |
| paleobuddy | Simulating Diversification Dynamics |
| paleofire | Analysis of Charcoal Records from the Global Charcoal Database |
| paleomorph | Geometric Morphometric Tools for Paleobiology |
| paleopop | Pattern-Oriented Modeling Framework for Coupled Niche-Population Paleo-Climatic Models |
| paleotree | Paleontological and Phylogenetic Analyses of Evolution |
| paleoTS | Analyze Paleontological Time-Series |
| paletteer | Comprehensive Collection of Color Palettes |
| paletteknife | Create Colour Scales and Legend from Continuous or Categorical Vectors |
| palettesForR | GPL Palettes Copied from 'Gimp' and 'Inkscape' |
| palettetown | Use Pokemon Inspired Colour Palettes |
| palinsol | Insolation for Palaeoclimate Studies |
| palm | Fitting Point Process Models via the Palm Likelihood |
| palmerpenguins | Palmer Archipelago (Antarctica) Penguin Data |
| palmid | RdRP Analysis Suite |
| PALMO | Identify Intra and Inter-Donor Variations in Bulk or Single Cell Longitudinal Dataset |
| palmtree | Partially Additive (Generalized) Linear Model Trees |
| palr | Colour Palettes for Data |
| pals | Color Palettes, Colormaps, and Tools to Evaluate Them |
| PAMA | Rank Aggregation with Partition Mallows Model |
| PamBinaries | Read and Process 'Pamguard' Binary Data |
| pamctdp | Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns |
| PAmeasures | Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data |
| PAMhm | Generate Heatmaps Based on Partitioning Around Medoids (PAM) |
| pamm | Power Analysis for Random Effects in Mixed Models |
| PAMmisc | Miscellaneous Functions for Passive Acoustic Analysis |
| pammtools | Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis |
| PAMpal | Load and Process Passive Acoustic Data |
| pampe | Implementation of the Panel Data Approach Method for Program Evaluation |
| pamr | Pam: Prediction Analysis for Microarrays |
| pan | Multiple Imputation for Multivariate Panel or Clustered Data |
| pAnalysis | Benchmarking and Rescaling R2 using Noise Percentile Analysis |
| PanCanVarSel | Pan-Cancer Variable Selection |
| pander | An R 'Pandoc' Writer |
| pandocfilters | Pandoc Filters for R |
| panelaggregation | Aggregate Longitudinal Survey Data |
| PanelCount | Random Effects and/or Sample Selection Models for Panel Count Data |
| PanelMatch | Matching Methods for Causal Inference with Time-Series Cross-Sectional Data |
| panelr | Regression Models and Utilities for Repeated Measures and Panel Data |
| panelvar | Panel Vector Autoregression |
| panelView | Visualizing Panel Data |
| panelWranglR | Panel Data Wrangling Tools |
| pangaear | Client for the 'Pangaea' Database |
| PanJen | A Semi-Parametric Test for Specifying Functional Form |
| panstarrs | Interface to the Pan-STARRS API |
| PantaRhei | Plots Sankey Diagrams |
| papaja | Prepare American Psychological Association Journal Articles with R Markdown |
| papci | Prevalence Adjusted PPV Confidence Interval |
| papeR | A Toolbox for Writing Pretty Papers and Reports |
| paperplanes | Distance Recordings from a Paper Plane Folding/Flying Experiment |
| parade | Pen's Income Parades |
| paradox | Define and Work with Parameter Spaces for Complex Algorithms |
| parallelDist | Parallel Distance Matrix Computation using Multiple Threads |
| ParallelDSM | Parallel Digital Soil Mapping using Machine Learning |
| ParallelLogger | Support for Parallel Computation, Logging, and Function Automation |
| parallelly | Enhancing the 'parallel' Package |
| parallelMap | Unified Interface to Parallelization Back-Ends |
| parallelMCMCcombine | Combining Subset MCMC Samples to Estimate a Posterior Density |
| parallelML | A Parallel-Voting Algorithm for many Classifiers |
| ParallelPC | Paralellised Versions of Constraint Based Causal Discovery Algorithms |
| parallelPlot | 'Htmlwidget' for a Parallel Coordinates Plot |
| param6 | A Fast and Lightweight R6 Parameter Interface |
| parameters | Processing of Model Parameters |
| paramGUI | A Shiny GUI for some Parameter Estimation Examples |
| ParamHelpers | Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning |
| paramhetero | Numeric and Visual Comparisons of Heterogeneity in Parametric Models |
| paramlink | Parametric Linkage and Other Pedigree Analysis in R |
| paramlink2 | Parametric Linkage Analysis |
| params | Simplify Parameters |
| paramtest | Run a Function Iteratively While Varying Parameters |
| paran | Horn's Test of Principal Components/Factors |
| ParBayesianOptimization | Parallel Bayesian Optimization of Hyperparameters |
| parcats | Interactive Parallel Categories Diagrams for 'easyalluvial' |
| ParDNAcopy | Parallel implementation of the "segment" function of package "DNAcopy" |
| Pareto | The Pareto, Piecewise Pareto and Generalized Pareto Distribution |
| ParetoPosStable | Computing, Fitting and Validating the PPS Distribution |
| parglm | Parallel GLM |
| pARI | Permutation-Based All-Resolutions Inference Method |
| parlitools | Tools for Analysing UK Politics |
| parma | Portfolio Allocation and Risk Management Applications |
| parmigene | Parallel Mutual Information Estimation for Gene Network Reconstruction |
| parmsurvfit | Parametric Models for Survival Data |
| paropt | Parameter Optimizing of ODE-Systems |
| parqr | Read in Multi-Part Parquet Files |
| parsec | Partial Orders in Socio-Economics |
| parsedate | Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats |
| parsel | Parallel Dynamic Web-Scraping Using 'RSelenium' |
| parsermd | Formal Parser and Related Tools for R Markdown Documents |
| parseRPDR | Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries |
| parSim | Parallel Simulation Studies |
| parsnip | A Common API to Modeling and Analysis Functions |
| PartCensReg | Estimation and Diagnostics for Partially Linear Censored Regression Models Based on Heavy-Tailed Distributions |
| partDSA | Partitioning Using Deletion, Substitution, and Addition Moves |
| partialised | Partialised Functions |
| Partiallyoverlapping | Partially Overlapping Samples Tests |
| particle.swarm.optimisation | Optimisation with Particle Swarm Optimisation |
| particles | A Graph Based Particle Simulator Based on D3-Force |
| partition | Agglomerative Partitioning Framework for Dimension Reduction |
| partitionBEFsp | Methods for Calculating the Loreau & Hector 2001 BEF Partition |
| partitionComparison | Implements Measures for the Comparison of Two Partitions |
| partitionMetric | Compute a distance metric between two partitions of a set |
| partitions | Additive Partitions of Integers |
| partools | Tools for the 'Parallel' Package |
| partR2 | Partitioning R2 in GLMMs |
| partsm | Periodic Autoregressive Time Series Models |
| party | A Laboratory for Recursive Partytioning |
| partykit | A Toolkit for Recursive Partytioning |
| parzer | Parse Messy Geographic Coordinates |
| PAS | Polygenic Analysis System (PAS) |
| pasadr | An Implementation of Process-Aware Stealthy Attack Detection(PASAD) |
| PASenseWear | Summarize Daily Physical Activity from 'SenseWear' Accelerometer Data |
| pass.lme | Power and Sample Size for Linear Mixed Effect Models |
| PASSED | Calculate Power and Sample Size for Two Sample Mean Tests |
| PAsso | Assessing the Partial Association Between Ordinal Variables |
| passport | Travel Smoothly Between Country Name and Code Formats |
| passt | Probability Associator Time (PASS-T) |
| password | Create Random Passwords |
| pasteAsComment | 'RStudio' Addin to Paste the Clipboard as a Comment Block or a 'roxygen' Block |
| pastecs | Package for Analysis of Space-Time Ecological Series |
| PASWR | Probability and Statistics with R |
| PASWR2 | Probability and Statistics with R, Second Edition |
| patchDVI | Package to Patch '.dvi' or '.synctex' Files |
| patchSynctex | Communication Between Editor and Viewer for Literate Programs |
| patchwork | The Composer of Plots |
| patentr | Access USPTO Bulk Data in Tidy Rectangular Format |
| patentsview | An R Client to the 'PatentsView' API |
| path.chain | Concise Structure for Chainable Paths |
| pathdiagram | Basic Functions for Drawing Path Diagrams |
| pathfindR | Enrichment Analysis Utilizing Active Subnetworks |
| pathfindR.data | Data Package for 'pathfindR' |
| pathlit | An SDK for the PathLit Engine |
| pathmapping | Compute Deviation and Correspondence Between Spatial Paths |
| pathmodelfit | Path Component Fit Indices for Latent Structural Equation Models |
| paths | An Imputation Approach to Estimating Path-Specific Causal Effects |
| pathviewr | Wrangle, Analyze, and Visualize Animal Movement Data |
| pathwayTMB | Pathway Based Tumor Mutational Burden |
| patientProfilesVis | Visualization of Patient Profiles |
| patPRO | Visualizing Temporal Microbiome Data |
| patrick | Parameterized Unit Testing |
| patternator | Feature Extraction from Female Brown Anole Lizard Dorsal Patterns |
| patternize | Quantification of Color Pattern Variation |
| patternplot | Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots using Patterns, Colors and Images |
| Patterns | Deciphering Biological Networks with Patterned Heterogeneous Measurements |
| PAutilities | Streamline Physical Activity Research |
| pavo | Perceptual Analysis, Visualization and Organization of Spectral Colour Data |
| pawacc | Physical Activity with Accelerometers |
| paws | Amazon Web Services Software Development Kit |
| paws.analytics | 'Amazon Web Services' Analytics Services |
| paws.application.integration | 'Amazon Web Services' Application Integration Services |
| paws.common | Paws Low-Level Amazon Web Services API |
| paws.compute | 'Amazon Web Services' Compute Services |
| paws.cost.management | 'Amazon Web Services' Cost Management Services |
| paws.customer.engagement | 'Amazon Web Services' Customer Engagement Services |
| paws.database | 'Amazon Web Services' Database Services |
| paws.developer.tools | 'Amazon Web Services' Developer Tools Services |
| paws.end.user.computing | 'Amazon Web Services' End User Computing Services |
| paws.machine.learning | 'Amazon Web Services' Machine Learning Services |
| paws.management | 'Amazon Web Services' Management & Governance Services |
| paws.networking | 'Amazon Web Services' Networking & Content Delivery Services |
| paws.security.identity | 'Amazon Web Services' Security, Identity, & Compliance Services |
| paws.storage | 'Amazon Web Services' Storage Services |
| pbANOVA | Parametric Bootstrap for ANOVA Models |
| pbapply | Adding Progress Bar to '*apply' Functions |
| pbatR | Pedigree/Family-Based Genetic Association Tests Analysis and Power |
| pbbd | Position Balanced and Nearly Position Balanced Block Designs |
| PBD | Protracted Birth-Death Model of Diversification |
| pbdMPI | Programming with Big Data – Interface to MPI |
| pbdSLAP | Programming with Big Data – Scalable Linear Algebra Packages |
| pbdZMQ | Programming with Big Data – Interface to 'ZeroMQ' |
| PBIBD | Partially Balanced Incomplete Block Designs |
| PBImisc | A Set of Datasets Used in My Classes or in the Book 'Modele Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych' |
| PBIR | Estimating the Probability of Being in Response and Related Outcomes |
| pbivnorm | Vectorized Bivariate Normal CDF |
| pbixr | Access Data and Metadata from 'Microsoft' 'Power BI' Documents |
| pbkrtest | Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models |
| pbm | Protein Binding Models |
| pbmcapply | Tracking the Progress of Mc*pply with Progress Bar |
| PBNPA | Permutation Based Non-Parametric Analysis of CRISPR Screen Data |
| pbo | Probability of Backtest Overfitting |
| pBrackets | Plot Brackets |
| PBRF | The Probability of Being in Response Function and Its Variance Estimates |
| pbs | Periodic B Splines |
| PBSadmb | ADMB for R Using Scripts or GUI |
| PBSddesolve | Solver for Delay Differential Equations |
| PBSmapping | Mapping Fisheries Data and Spatial Analysis Tools |
| PBSmodelling | GUI Tools Made Easy: Interact with Models and Explore Data |
| pbv | Probabilities for Bivariate Normal Distribution |
| pca3d | Three Dimensional PCA Plots |
| PCA4TS | Segmenting Multiple Time Series by Contemporaneous Linear Transformation |
| pcadapt | Fast Principal Component Analysis for Outlier Detection |
| PCADSC | Tools for Principal Component Analysis-Based Data Structure Comparisons |
| pcal | Calibration of P-Values for Point Null Hypothesis Testing |
| pcaL1 | L1-Norm PCA Methods |
| pcalg | Methods for Graphical Models and Causal Inference |
| pCalibrate | Bayesian Calibrations of p-Values |
| pcalls | Pricing of Different Types of Call |
| PCAmatchR | Match Cases to Controls Based on Genotype Principal Components |
| PCAmixdata | Multivariate Analysis of Mixed Data |
| pcaPP | Robust PCA by Projection Pursuit |
| pcatsAPIclientR | 'PCATS' API Client |
| pccc | Pediatric Complex Chronic Conditions |
| PCDimension | Finding the Number of Significant Principal Components |
| pcdpca | Dynamic Principal Components for Periodically Correlated Functional Time Series |
| pcds | Proximity Catch Digraphs and Their Applications |
| pcensmix | Model Fitting to Progressively Censored Mixture Data |
| pcev | Principal Component of Explained Variance |
| pcFactorStan | Stan Models for the Paired Comparison Factor Model |
| PCFAM | Computation of Ancestry Scores with Mixed Families and Unrelated Individuals |
| pcg | Preconditioned Conjugate Gradient Algorithm for solving Ax=b |
| pcgen | Reconstruction of Causal Networks for Data with Random Genetic Effects |
| PCGSE | Principal Component Gene Set Enrichment |
| pch | Piecewise Constant Hazard Models for Censored and Truncated Data |
| pchc | Bayesian Network Learning with the PCHC and Related Algorithms |
| PCICt | Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars |
| pcIRT | IRT Models for Polytomous and Continuous Item Responses |
| PCL | Proximal Causal Learning |
| pcLasso | Principal Components Lasso |
| PCLassoReg | Group Regression Models for Risk Protein Complex Identification |
| pcmabc | Approximate Bayesian Computations for Phylogenetic Comparative Methods |
| PCMBase | Simulation and Likelihood Calculation of Phylogenetic Comparative Models |
| PCMBaseCpp | Fast Likelihood Calculation for Phylogenetic Comparative Models |
| PCMRS | Model Response Styles in Partial Credit Models |
| pcnetmeta | Patient-Centered Network Meta-Analysis |
| pco | Panel Cointegration Tests |
| pCODE | Estimation of an Ordinary Differential Equation Model by Parameter Cascade Method |
| PCovR | Principal Covariates Regression |
| pcoxtime | Penalized Cox Proportional Hazard Model for Time-Dependent Covariates |
| PCPS | Principal Coordinates of Phylogenetic Structure |
| pcr | Analyzing Real-Time Quantitative PCR Data |
| PCRedux | Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit |
| PCS | Calculate the Probability of Correct Selection (PCS) |
| pcse | Panel-Corrected Standard Error Estimation in R |
| PCSinR | Parallel Constraint Satisfaction Networks in R |
| pcsstools | Tools for Regression Using Pre-Computed Summary Statistics |
| pcSteiner | Convenient Tool for Solving the Prize-Collecting Steiner Tree Problem |
| pct | Propensity to Cycle Tool |
| pcts | Periodically Correlated and Periodically Integrated Time Series |
| pda | Privacy-Preserving Distributed Algorithms |
| pdc | Permutation Distribution Clustering |
| PDE | Extract Tables and Sentences from PDFs with User Interface |
| pder | Panel Data Econometrics with R |
| pdfCluster | Cluster Analysis via Nonparametric Density Estimation |
| PDFEstimator | Nonparametric Probability Density Estimator |
| pdfetch | Fetch Economic and Financial Time Series Data from Public Sources |
| pdfminer | Read Portable Document Format (PDF) Files |
| pdfsearch | Search Tools for PDF Files |
| pdftables | Programmatic Conversion of PDF Tables |
| pdftools | Text Extraction, Rendering and Converting of PDF Documents |
| pdi | Phenotypic Index Measures for Oak Decline Severity |
| pdist | Partitioned Distance Function |
| PDM | Photogrammetric Distances Measurer |
| PDMIF | Fits Heterogeneous Panel Data Models |
| pdmod | Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena |
| PDN | Personalized Disease Network |
| pdp | Partial Dependence Plots |
| PdPDB | Pattern Discovery in PDB Structures of Metalloproteins |
| pdqr | Work with Custom Distribution Functions |
| PDQutils | PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations |
| pdR | Threshold Model and Unit Root Tests in Cross-Section and Time Series Data |
| PDSCE | Positive Definite Sparse Covariance Estimators |
| PDShiny | 'Probability Distribution Shiny' |
| pdSpecEst | An Analysis Toolbox for Hermitian Positive Definite Matrices |
| PDtoolkit | Collection of Tools for PD Rating Model Development and Validation |
| pdxTrees | Data Package of Portland, Oregon Trees |
| pdynmc | Moment Condition Based Estimation of Linear Dynamic Panel Data Models |
| peacesciencer | Tools and Data for Quantitative Peace Science Research |
| PEACH | Pareto Enrichment Analysis for Combining Heterogeneous Datasets |
| Peacock.test | Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests |
| peacots | Periodogram Peaks in Correlated Time Series |
| PeakError | Compute the Label Error of Peak Calls |
| peakRAM | Monitor the Total and Peak RAM Used by an Expression or Function |
| PeakSegDisk | Disk-Based Constrained Change-Point Detection |
| PeakSegDP | Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data |
| PeakSegJoint | Joint Peak Detection in Several ChIP-Seq Samples |
| PeakSegOptimal | Optimal Segmentation Subject to Up-Down Constraints |
| pearson7 | Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2 |
| PearsonDS | Pearson Distribution System |
| PearsonICA | Independent Component Analysis using Score Functions from the Pearson System |
| pec | Prediction Error Curves for Risk Prediction Models in Survival Analysis |
| pecora | Permutation Conditional Random Tests |
| pedalfast.data | PEDALFAST Data |
| pedbp | Pediatric Blood Pressure |
| pedbuildr | Pedigree Reconstruction |
| pedgene | Gene-Level Statistics for Pedigree Data |
| pedigree | Pedigree Functions |
| pedigreemm | Pedigree-based mixed-effects models |
| pedigreeTools | Versatile Functions for Working with Pedigrees |
| pedmod | Pedigree Models |
| pedmut | Mutation Models for Pedigree Likelihood Computations |
| pedometrics | Miscellaneous Pedometric Tools |
| pedprobr | Probability Computations on Pedigrees |
| pedquant | Public Economic Data and Quantitative Analysis |
| pedSimulate | Pedigree, Genetic Merit, Phenotype, and Genotype Simulation |
| pedsuite | Easy Installation of the 'ped suite' Packages for Pedigree Analysis |
| pedtools | Creating and Working with Pedigrees and Marker Data |
| peermodels | Client-Side R API Wrapper for Peer Models Network Model Repository |
| PeerPerformance | Luck-Corrected Peer Performance Analysis in R |
| pegas | Population and Evolutionary Genetics Analysis System |
| PEGroupTesting | Population Proportion Estimation using Group Testing |
| PEIP | Geophysical Inverse Theory and Optimization |
| PEkit | Partition Exchangeability Toolkit |
| PELVIS | Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae |
| pema | Penalized Meta-Analysis |
| pems.utils | Portable Emissions (and Other Mobile) Measurement System Utilities |
| penAFT | Fit the Regularized Gehan Estimator with Elastic Net and Sparse Group Lasso Penalties |
| penalized | L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model |
| penalizedLDA | Penalized Classification using Fisher's Linear Discriminant |
| penalizedSVM | Feature Selection SVM using Penalty Functions |
| penaltyLearning | Penalty Learning |
| pencal | Penalized Regression Calibration (PRC) |
| pencopulaCond | Estimating Non-Simplified Vine Copulas Using Penalized Splines |
| PenCoxFrail | Regularization in Cox Frailty Models |
| pendensity | Density Estimation with a Penalized Mixture Approach |
| penDvine | Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines |
| penfa | Single- And Multiple-Group Penalized Factor Analysis |
| PenIC | Semiparametric Regression Analysis of Interval-Censored Data using Penalized Splines |
| penMSM | Estimating Regularized Multi-state Models Using L1 Penalties |
| penPHcure | Variable Selection in PH Cure Model with Time-Varying Covariates |
| penppml | Penalized Poisson Pseudo Maximum Likelihood Regression |
| pense | Penalized Elastic Net S/MM-Estimator of Regression |
| pensim | Simulation of High-Dimensional Data and Parallelized Repeated Penalized Regression |
| peopleanalyticsdata | Data Sets for Keith McNulty's Handbook of Regression Modeling in People Analytics |
| pepe | Data Manipulation |
| peperr | Parallelised Estimation of Prediction Error |
| peppm | Piecewise Exponential Distribution with Random Time Grids |
| pepr | Reading Portable Encapsulated Projects |
| PepSAVIms | PepSAVI-MS Data Analysis |
| peptider | Evaluation of Diversity in Nucleotide Libraries |
| Peptides | Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
| pequod | Moderated Regression Package |
| peramo | Permutation Tests for Randomization Model |
| Perc | Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network |
| perccal | Implementing Double Bootstrap Linear Regression Confidence Intervals Using the 'perc-cal' Method |
| perccalc | Estimate Percentiles from an Ordered Categorical Variable |
| percentiles | Calculate (Stratified) Percentiles |
| perfectphyloR | Reconstruct Perfect Phylogenies from DNA Sequence Data |
| PerFit | Person Fit |
| performance | Assessment of Regression Models Performance |
| PerformanceAnalytics | Econometric Tools for Performance and Risk Analysis |
| performanceEstimation | An Infra-Structure for Performance Estimation of Predictive Models |
| pergola | Toolbox for Polyploid Genetic Data |
| peRiodiCS | Functions for Generating Periodic Curves |
| PeriodicTable | Periodic Table of the Elements |
| periscope | Enterprise Streamlined 'Shiny' Application Framework |
| perm | Exact or Asymptotic Permutation Tests |
| PermAlgo | Permutational Algorithm to Simulate Survival Data |
| PerMallows | Permutations and Mallows Distributions |
| PERMANOVA | Multivariate Analysis of Variance Based on Distances and Permutations |
| permGS | Permutational Group Sequential Test for Time-to-Event Data |
| permimp | Conditional Permutation Importance |
| permPATH | Permutation Based Gene Expression Pathway Analysis |
| permubiome | A Permutation Based Test for Biomarker Discovery in Microbiome Data |
| permuco | Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals |
| PermutationR | Conduct Permutation Analysis of Variance in R |
| permutations | The Symmetric Group: Permutations of a Finite Set |
| permute | Functions for Generating Restricted Permutations of Data |
| permutes | Permutation Tests for Time Series Data |
| perry | Resampling-Based Prediction Error Estimation for Regression Models |
| perryExamples | Examples for Integrating Prediction Error Estimation into Regression Models |
| persDx | Estimating Personalized Diagnostics Rules |
| PerseusR | Perseus R Interop |
| persiandictionary | English to Persian dictionary |
| PersianStemmer | Persian Stemmer for Text Analysis |
| PersomicsArray | Automated Persomics Array Image Extraction |
| personalized | Estimation and Validation Methods for Subgroup Identification and Personalized Medicine |
| personalized2part | Two-Part Estimation of Treatment Rules for Semi-Continuous Data |
| personalr | Automated Personal Package Setup |
| personr | Test Your Personality |
| perspectev | Permutation of Species During Turnover Events |
| peRspective | Interface to the 'Perspective' API |
| perturbR | Random Perturbation of Count Matrices |
| peruse | A Tidy API for Sequence Iteration and Set Comprehension |
| pesel | Automatic Estimation of Number of Principal Components in PCA |
| PesticideLoadIndicator | Computes Danish Pesticide Load Indicator |
| pestr | Interface to Download Data on Pests and Hosts from 'EPPO' |
| PetfindeR | 'Petfinder' API Wrapper |
| petitr | Relative Growth Rate |
| petrinetR | Building, Visualizing, Exporting and Replaying Petri Nets |
| pewdata | Reproducible Retrieval of Pew Research Center Datasets |
| pexm | Loading a JAGS Module for the Piecewise Exponential Distribution |
| pez | Phylogenetics for the Environmental Sciences |
| pfa | Estimates False Discovery Proportion Under Arbitrary Covariance Dependence |
| pfica | Independent Component Analysis for Univariate Functional Data |
| PFIM | Population Fisher Information Matrix |
| pgam | Poisson-Gamma Additive Models |
| pgdraw | Generate Random Samples from the Polya-Gamma Distribution |
| PGEE | Penalized Generalized Estimating Equations in High-Dimension |
| pgee.mixed | Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes |
| pgirmess | Spatial Analysis and Data Mining for Field Ecologists |
| pglm | Panel Generalized Linear Models |
| PGM2 | Nested Resolvable Designs and their Associated Uniform Designs |
| pGMGM | Estimating Multiple Gaussian Graphical Models (GGM) in Penalized Gaussian Mixture Models (GMM) |
| pgmm | Parsimonious Gaussian Mixture Models |
| pgnorm | The p-Generalized Normal Distribution |
| pGPx | Pseudo-Realizations for Gaussian Process Excursions |
| pgraph | Build Dependency Graphs using Projection |
| PGRdup | Discover Probable Duplicates in Plant Genetic Resources Collections |
| pgsc | Computes Powell's Generalized Synthetic Control Estimator |
| pgTools | Functions for Generating PostgreSQL Statements/Scripts |
| pguIMP | 'pguIMP' |
| PH1XBAR | Phase I Shewhart X-Bar Chart |
| ph2bayes | Bayesian Single-Arm Phase II Designs |
| ph2bye | Phase II Clinical Trial Design Using Bayesian Methods |
| ph2mult | Phase II Clinical Trial Design for Multinomial Endpoints |
| phacking | Sensitivity Analysis for p-Hacking in Meta-Analyses |
| PhageCocktail | Design of the Best Phage Cocktail |
| phangorn | Phylogenetic Reconstruction and Analysis |
| pharmaRTF | Enhanced RTF Wrapper for Use with Existing Table Packages |
| pharmr | Interface to the 'Pharmpy' 'Pharmacometrics' Library |
| phase | Analyse Biological Time-Series Data |
| Phase123 | Simulating and Conducting Phase 123 Trials |
| Phase12Compare | Simulates SPSO and Efftox Phase 12 Trials with Correlated Outcomes |
| phase1PRMD | Personalized Repeated Measurement Design for Phase I Clinical Trials |
| phase1RMD | Repeated Measurement Design for Phase I Clinical Trial |
| phaseR | Phase Plane Analysis of One- And Two-Dimensional Autonomous ODE Systems |
| PhaseTypeR | General-Purpose Phase-Type Functions |
| phateR | PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding |
| PHclust | Poisson Hurdle Clustering for Sparse Microbiome Data |
| phd | Permutation Testing in High-Dimensional Linear Models |
| pheatmap | Pretty Heatmaps |
| PheCAP | High-Throughput Phenotyping with EHR using a Common Automated Pipeline |
| phecodemap | Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes |
| PHEindicatormethods | Common Public Health Statistics and their Confidence Intervals |
| phenesse | Estimate Phenological Metrics using Presence-Only Data |
| phenex | Auxiliary Functions for Phenological Data Analysis |
| PHENIX | Phenotypic Integration Index |
| phenmod | Auxiliary Functions for Phenological Data Processing, Modelling and Result Handling |
| phenModel | Insect Phenology Model Evaluation Based on Daily Temperatures |
| pheno | Auxiliary Functions for Phenological Data Analysis |
| phenocamr | Facilitates 'PhenoCam' Data Access and Time Series Post-Processing |
| phenoCDM | Continuous Development Models for Incremental Time-Series Analysis |
| phenofit | Extract Remote Sensing Vegetation Phenology |
| phenology | Tools to Manage a Parametric Function that Describes Phenology and More |
| phenomap | Projecting Satellite-Derived Phenology in Space |
| phenopix | Process Digital Images of a Vegetation Cover |
| PheNorm | Unsupervised Gold-Standard Label Free Phenotyping Algorithm for EHR Data |
| Phenotype | A Tool for Phenotypic Data Processing |
| PhenotypeSimulator | Flexible Phenotype Simulation from Different Genetic and Noise Models |
| phers | Calculate Phenotype Risk Scores |
| PHeval | Evaluation of the Proportional Hazards Assumption with a Standardized Score Process |
| PheVis | Automatic Phenotyping of Electronic Health Record at Visit Resolution |
| phia | Post-Hoc Interaction Analysis |
| phiDelta | Tool for Phi Delta Analysis of Features |
| philentropy | Similarity and Distance Quantification Between Probability Functions |
| PhilipsHue | R Interface to the Philips Hue API |
| PHInfiniteEstimates | Tools for Inference in the Presence of a Monotone Likelihood |
| PhitestR | Analyzing the Heterogeneity of Single-Cell Populations |
| phm | Phrase Mining |
| phonenumber | Convert Letters to Numbers and Back as on a Telephone Keypad |
| phonfieldwork | Linguistic Phonetic Fieldwork Tools |
| phonics | Phonetic Spelling Algorithms |
| phonR | Tools for Phoneticians and Phonologists |
| phonTools | Tools for Phonetic and Acoustic Analyses |
| phosphoricons | 'Phosphor' Icons for R |
| photobiology | Photobiological Calculations |
| photobiologyFilters | Spectral Transmittance and Spectral Reflectance Data |
| photobiologyInOut | Read Spectral and Logged Data from Foreign Files |
| photobiologyLamps | Spectral Irradiance Data for Lamps |
| photobiologyLEDs | Spectral Data for Light-Emitting-Diodes |
| photobiologyPlants | Plant Photobiology Related Functions and Data |
| photobiologySensors | Spectral Response Data for Light Sensors |
| photobiologySun | Data for Sunlight Spectra |
| photobiologyWavebands | Waveband Definitions for UV, VIS, and IR Radiation |
| PhotosynQ | Connect to PhotosynQ |
| photosynthesis | Tools for Plant Ecophysiology & Modeling |
| phreeqc | R Interface to Geochemical Modeling Software |
| PHSMM | Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models |
| phuassess | Proportional Habitat Use Assessment |
| PhViD | PharmacoVigilance Signal Detection |
| Phxnlme | Run Phoenix NLME and Perform Post-Processing |
| phyclust | Phylogenetic Clustering (Phyloclustering) |
| phyext2 | An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase' |
| phylin | Spatial Interpolation of Genetic Data |
| phylobase | Base Package for Phylogenetic Structures and Comparative Data |
| phylocanvas | Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library |
| phyloclim | Integrating Phylogenetics and Climatic Niche Modeling |
| phylocomr | Interface to 'Phylocom' |
| PhylogeneticEM | Automatic Shift Detection using a Phylogenetic EM |
| PHYLOGR | Functions for Phylogenetically Based Statistical Analyses |
| phylogram | Dendrograms for Evolutionary Analysis |
| phylolm | Phylogenetic Linear Regression |
| phylometrics | Estimating Statistical Errors of Phylogenetic Metrics |
| phylopath | Perform Phylogenetic Path Analysis |
| phyloregion | Biogeographic Regionalization and Macroecology |
| phylosamp | The Probability of Transmission Given Phylogenetic Linkage |
| phyloseqGraphTest | Graph-Based Permutation Tests for Microbiome Data |
| phylosignal | Exploring the Phylogenetic Signal in Continuous Traits |
| phylotate | Phylogenies with Annotations |
| phylotools | Phylogenetic Tools for Eco-Phylogenetics |
| phyloTop | Calculating Topological Properties of Phylogenies |
| phyr | Model Based Phylogenetic Analysis |
| phyreg | The Phylogenetic Regression of Grafen (1989) |
| PhysActBedRest | Marks Periods of 'Bedrest' in Actigraph Accelerometer Data |
| PhysicalActivity | Process Accelerometer Data for Physical Activity Measurement |
| physiology | Calculate physiologic characteristics of awake and anesthetized adults, children and infants |
| PhySortR | A Fast, Flexible Tool for Sorting Phylogenetic Trees |
| phytools | Phylogenetic Tools for Comparative Biology (and Other Things) |
| piar | Price Index Aggregation |
| picante | Integrating Phylogenies and Ecology |
| picasso | Pathwise Calibrated Sparse Shooting Algorithm |
| PICBayes | Bayesian Models for Partly Interval-Censored Data |
| picker | Pick Data Points from a Deck.gl Scatterplot |
| pid | Process Improvement using Data |
| PieceExpIntensity | Bayesian Model to Find Changepoints Based on Rates and Count Data |
| piecemaker | Tools for Preparing Text for Tokenizers |
| piecepackr | Board Game Graphics |
| piecewiseSEM | Piecewise Structural Equation Modeling |
| piggyback | Managing Larger Data on a GitHub Repository |
| PIGShift | Polygenic Inverse Gamma Shifts |
| Pijavski | Global Univariate Minimization |
| pillar | Coloured Formatting for Columns |
| pim | Fit Probabilistic Index Models |
| pimeta | Prediction Intervals for Random-Effects Meta-Analysis |
| pinfsc50 | Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
| pingers | Identify, Ping, and Log Internet Provider Connection Data |
| pingr | Check if a Remote Computer is Up |
| pinnacle.API | A Wrapper for the Pinnacle API |
| pinnacle.data | Market Odds Data from Pinnacle |
| pinochet | Data About the Victims of the Pinochet Regime, 1973-1990 |
| pinp | 'pinp' is not 'PNAS' |
| pins | Pin, Discover and Share Resources |
| PINSPlus | Clustering Algorithm for Data Integration and Disease Subtyping |
| PINstimation | Estimation of the Probability of Informed Trading |
| pinyin | Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other Codes |
| pipe.design | Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design |
| pipebind | Flexible Binding for Complex Function Evaluation with the Base R |> Pipe |
| pipefittr | Convert Nested Functions to Pipes |
| pipeGS | Permutation p-Value Estimation for Gene Set Tests |
| pipeliner | Machine Learning Pipelines for R |
| pipenostics | Diagnostics, Reliability and Predictive Maintenance of Pipeline Systems |
| pipeR | Multi-Paradigm Pipeline Implementation |
| pirate | Generated Effect Modifier |
| piratings | Calculate Pi Ratings for Teams Competing in Sport Matches |
| piRF | Prediction Intervals for Random Forests |
| pisaRT | Small Example Response and Response Time Data from PISA 2018 |
| pitchRx | Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing 'pitchfx' |
| piton | Parsing Expression Grammars in Rcpp |
| pivmet | Pivotal Methods for Bayesian Relabelling and k-Means Clustering |
| pivotaltrackR | A Client for the 'Pivotal Tracker' API |
| pivottabler | Create Pivot Tables |
| piwikproR | Access 'Piwik Pro' Website Statistics |
| pixarfilms | Pixar Films and Achievements |
| pixelclasser | Classifies Image Pixels by Colour |
| pixelpuzzle | Puzzle Game for the R Console |
| pixels | Tools for Working with Image Pixels |
| pixiedust | Tables so Beautifully Fine-Tuned You Will Believe It's Magic |
| pixmap | Bitmap Images / Pixel Maps |
| PK | Basic Non-Compartmental Pharmacokinetics |
| PKconverter | The Parameter Converter of the Pharmacokinetic Models |
| pkdata | Creates Pharmacokinetic/Pharmacodynamic (PK/PD) Data |
| pkgbuild | Find Tools Needed to Build R Packages |
| pkgcache | Cache 'CRAN'-Like Metadata and R Packages |
| pkgcond | Classed Error and Warning Conditions |
| pkgconfig | Private Configuration for 'R' Packages |
| pkgdepends | Package Dependency Resolution and Downloads |
| pkgdepR | Statically Determine Function Dependencies Between Packages |
| pkgdown | Make Static HTML Documentation for a Package |
| pkgfilecache | Download and Manage Optional Package Data |
| pkggraph | A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories |
| pkgKitten | Create Simple Packages Which Do not Upset R Package Checks |
| pkglite | Compact Package Representations |
| pkgload | Simulate Package Installation and Attach |
| pkgmaker | Development Utilities for R Packages |
| pkgndep | Analyze Dependency Heaviness of R Packages |
| pkgnet | Get Network Representation of an R Package |
| pkgnews | Retrieve R Package News Files |
| pkgsearch | Search and Query CRAN R Packages |
| pkgstats | Metrics of R Packages |
| pkgverse | Build a Meta-Package Universe |
| PKI | Public Key Infrastucture for R Based on the X.509 Standard |
| PKLMtest | Classification Based MCAR Test |
| pkmon | Least-Squares Estimator under k-Monotony Constraint for Discrete Functions |
| PKNCA | Perform Pharmacokinetic Non-Compartmental Analysis |
| PKPDsim | Tools for Performing Pharmacokinetic-Pharmacodynamic Simulations |
| pkr | Pharmacokinetics in R |
| pks | Probabilistic Knowledge Structures |
| pKSEA | Prediction-Based Kinase-Substrate Enrichment Analysis |
| pksensi | Global Sensitivity Analysis in Physiologically Based Kinetic Modeling |
| PL94171 | Tabulate P.L. 94-171 Redistricting Data Summary Files |
| plac | A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data |
| placer | PLastic ACcumulation Estimate using R (PLACER) |
| places | Clusters GPS Data into Places |
| PlackettLuce | Plackett-Luce Models for Rankings |
| plainview | Plot Raster Images Interactively on a Plain HTML Canvas |
| plan | Tools for Project Planning |
| PlaneGeometry | Plane Geometry |
| Planesmuestra | Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD 414 Acceptance Sampling Plan |
| PlanetNICFI | Processing of the 'Planet NICFI' Satellite Imagery |
| planets | Simple and Accessible Data from all Known Planets |
| plantecophys | Modelling and Analysis of Leaf Gas Exchange Data |
| plantecowrap | Enhancing Capabilities of 'plantecophys' |
| plaqr | Partially Linear Additive Quantile Regression |
| PlasmaMutationDetector | Tumor Mutation Detection in Plasma |
| PlasmaMutationDetector2 | Tumor Mutation Detection in Plasma using Barcoding |
| Plasmidprofiler | Visualization of Plasmid Profile Results |
| plater | Read, Tidy, and Display Data from Microtiter Plates |
| platetools | Tools and Plots for Multi-Well Plates |
| PlatformDesign | Optimal Two-Period Multi-Arm Platform Design |
| platowork | Data from a Test of the PlatoWork tDCS Headset |
| Platypus | Single-Cell Immune Repertoire and Gene Expression Analysis |
| PlayerRatings | Dynamic Updating Methods for Player Ratings Estimation |
| plde | Penalized Log-Density Estimation Using Legendre Polynomials |
| pleio | Pleiotropy Test for Multiple Traits on a Genetic Marker |
| pleiotest | Fast Sequential Pleiotropy Test |
| pleLMA | Pseudo-Likelihood Estimation of Log-Multiplicative Association Models |
| PLFD | Portmanteau Local Feature Discrimination for Matrix-Variate Data |
| plfm | Probabilistic Latent Feature Analysis |
| plfMA | A GUI to View, Design and Export Various Graphs of Data |
| plgp | Particle Learning of Gaussian Processes |
| pliman | Tools for Plant Image Analysis |
| plink | IRT Separate Calibration Linking Methods |
| plinkFile | 'PLINK' (and 'GCTA') File Helpers |
| plinkQC | Genotype Quality Control with 'PLINK' |
| plm | Linear Models for Panel Data |
| PLMIX | Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings |
| PLmixed | Estimate (Generalized) Linear Mixed Models with Factor Structures |
| pln | Polytomous Logit-Normit (Graded Logistic) Model Estimation |
| PLNmodels | Poisson Lognormal Models |
| plnr | A System for Planing Analyses |
| plogr | The 'plog' C++ Logging Library |
| PLordprob | Multivariate Ordered Probit Model via Pairwise Likelihood |
| PLORN | Prediction with Less Overfitting and Robust to Noise |
| plot.matrix | Visualizes a Matrix as Heatmap |
| plot3D | Plotting Multi-Dimensional Data |
| plot3Drgl | Plotting Multi-Dimensional Data - Using 'rgl' |
| plot3logit | Ternary Plots for Trinomial Regression Models |
| plotBart | Diagnostic and Plotting Functions to Supplement 'bartCause' |
| plotbb | Grammar of Graphics for 'base' Plot |
| PlotContour | Plot Contour Line |
| plotdap | Easily Visualize Data from 'ERDDAP' Servers via the 'rerddap' Package |
| plotDK | Plot Summary Statistics as Choropleth Maps of Danish Administrative Areas |
| plotfunctions | Various Functions to Facilitate Visualization of Data and Analysis |
| plotGMM | Tools for Visualizing Gaussian Mixture Models |
| plothelper | New Plots Based on 'ggplot2' and Functions to Create Regular Shapes |
| plotHMM | Plot Hidden Markov Models |
| plotKML | Visualization of Spatial and Spatio-Temporal Objects in Google Earth |
| plotluck | 'ggplot2' Version of "I'm Feeling Lucky!" |
| plotly | Create Interactive Web Graphics via 'plotly.js' |
| plotlyGeoAssets | Render 'Plotly' Maps without an Internet Connection |
| plotMCMC | MCMC Diagnostic Plots |
| plotMElm | Plot Marginal Effects from Linear Models |
| plotmm | Tidy Tools for Visualizing Mixture Models |
| plotmo | Plot a Model's Residuals, Response, and Partial Dependence Plots |
| plotpc | Plot Principal Component Histograms Around a Scatter Plot |
| PlotPrjNetworks | Useful Networking Tools for Project Management |
| plotprotein | Development of Visualization Tools for Protein Sequence |
| plotrix | Various Plotting Functions |
| plotROC | Generate Useful ROC Curve Charts for Print and Interactive Use |
| plotrr | Making Visual Exploratory Data Analysis with Nested Data Easier |
| plotscale | Scale Graphics Devices Using Plot Dimensions |
| plotSEMM | Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models |
| plotwidgets | Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots |
| plpoisson | Prediction Limits for Poisson Distribution |
| PLreg | Power Logit Regression for Modeling Bounded Data |
| PLRModels | Statistical Inference in Partial Linear Regression Models |
| pls | Partial Least Squares and Principal Component Regression |
| plsdof | Degrees of Freedom and Statistical Inference for Partial Least Squares Regression |
| plsgenomics | PLS Analyses for Genomics |
| PLSiMCpp | Methods for Partial Linear Single Index Model |
| plsmod | Model Wrappers for Projection Methods |
| plsmselect | Linear and Smooth Predictor Modelling with Penalisation and Variable Selection |
| plsRbeta | Partial Least Squares Regression for Beta Regression Models |
| plsRcox | Partial Least Squares Regression for Cox Models and Related Techniques |
| plsRglm | Partial Least Squares Regression for Generalized Linear Models |
| plsVarSel | Variable Selection in Partial Least Squares |
| pltesim | Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence |
| plu | Dynamically Pluralize Phrases |
| plugdensity | Plug-in Kernel Density Estimation |
| plumber | An API Generator for R |
| plumberDeploy | Plumber Deployment |
| plumbertableau | Turn 'Plumber' APIs into 'Tableau' Extensions |
| plumbr | Mutable and Dynamic Data Models |
| pluralize | Pluralize and 'Singularize' Any (English) Word |
| pluscode | Encoder for Google 'Pluscodes' |
| plusser | A Google+ Interface for R |
| plyr | Tools for Splitting, Applying and Combining Data |
| PMA | Penalized Multivariate Analysis |
| PMA2 | Penalized Multivariate Analysis |
| PMAPscore | Identify Prognosis-Related Pathways Altered by Somatic Mutation |
| pmc | Phylogenetic Monte Carlo |
| pmclust | Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model |
| PMCMR | Calculate Pairwise Multiple Comparisons of Mean Rank Sums |
| PMCMRplus | Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended |
| pmd | Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis and Reactomics Analysis |
| pmetar | Processing METAR Weather Reports |
| pmhtutorial | Minimal Working Examples for Particle Metropolis-Hastings |
| pmlbr | Interface to the Penn Machine Learning Benchmarks Data Repository |
| pmledecon | Deconvolution Density Estimation using Penalized MLE |
| pmml | Generate PMML for Various Models |
| pmmlTransformations | Transforms Input Data from a PMML Perspective |
| pmparser | Create and Maintain a Relational Database of Data from PubMed/MEDLINE |
| pmr | Probability Models for Ranking Data |
| pmsampsize | Calculates the Minimum Sample Size Required for Developing a Multivariable Prediction Model |
| pmultinom | One-Sided Multinomial Probabilities |
| pmwg | Particle Metropolis Within Gibbs |
| PMwR | Portfolio Management with R |
| pmxpartab | Parameter Tables for PMx Analyses |
| pmxTools | Pharmacometric and Pharmacokinetic Toolkit |
| PNADcIBGE | Downloading, Reading and Analyzing PNADC Microdata |
| PNAR | Poisson Network Autoregressive Models |
| png | Read and write PNG images |
| PNSIBGE | Downloading, Reading and Analyzing PNS Microdata |
| PNWColors | Color Palettes Inspired by Nature in the US Pacific Northwest |
| PoA | Finds the Price of Anarchy for Routing Games |
| pocketapi | Wrapper Around the 'Pocket' API |
| POCRE | Penalized Orthogonal-Components Regression |
| pocrm | Dose Finding in Drug Combination Phase I Trials Using PO-CRM |
| POD | Probability of Detection for Qualitative PCR Methods |
| PoDBAY | Vaccine Efficacy Estimation Package |
| podcleaner | Legacy Scottish Post Office Directories Cleaner |
| poems | Pattern-Oriented Ensemble Modeling System |
| POET | Principal Orthogonal ComplEment Thresholding (POET) Method |
| pogit | Bayesian Variable Selection for a Poisson-Logistic Model |
| PogromcyDanych | DataCrunchers (PogromcyDanych) is the Massive Online Open Course that Brings R and Statistics to the People |
| poibin | The Poisson Binomial Distribution |
| PoiClaClu | Classification and Clustering of Sequencing Data Based on a Poisson Model |
| poilog | Poisson Lognormal and Bivariate Poisson Lognormal Distribution |
| POINT | Protein Structure Guided Local Test |
| pointblank | Data Validation and Organization of Metadata for Local and Remote Tables |
| pointdensityP | Point Density for Geospatial Data |
| PointedSDMs | Fit Models Derived from Point Processes to Species Distributions using 'inlabru' |
| PointFore | Interpretation of Point Forecasts as State-Dependent Quantiles and Expectiles |
| pointr | Working Comfortably with Pointers and Shortcuts to R Objects |
| pointRes | Analyzing Pointer Years and Components of Resilience |
| poio | Input/Output Functionality for "PO" and "POT" Message Translation Files |
| PoisBinNonNor | Data Generation with Poisson, Binary and Continuous Components |
| poisbinom | A Faster Implementation of the Poisson-Binomial Distribution |
| PoisBinOrd | Data Generation with Poisson, Binary and Ordinal Components |
| PoisBinOrdNonNor | Generation of Up to Four Different Types of Variables |
| PoisBinOrdNor | Data Generation with Poisson, Binary, Ordinal and Normal Components |
| poisDoubleSamp | Confidence Intervals with Poisson Double Sampling |
| poisFErobust | Poisson Fixed Effects Robust |
| poismf | Factorization of Sparse Counts Matrices Through Poisson Likelihood |
| PoisNonNor | Simultaneous Generation of Count and Continuous Data |
| PoisNor | Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals |
| poisson | Simulating Homogenous & Non-Homogenous Poisson Processes |
| poisson.glm.mix | Fit High Dimensional Mixtures of Poisson GLMs |
| PoissonBinomial | Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions |
| poissonMT | Robust M-Estimators Based on Transformations for Poisson Model |
| PoissonMultinomial | The Poisson-Multinomial Distribution |
| PoissonPCA | Poisson-Noise Corrected PCA |
| poissonreg | Model Wrappers for Poisson Regression |
| poistweedie | Poisson-Tweedie Exponential Family Models |
| poker | Play Texas Hold Em Poker |
| polaroid | Create Hex Stickers with 'shiny' |
| poLCA | Polytomous Variable Latent Class Analysis |
| PolicyPortfolios | Tools for Managing, Measuring and Visualizing Policy Portfolios |
| policytree | Policy Learning via Doubly Robust Empirical Welfare Maximization over Trees |
| polimetrics | R Tools for Political Measures |
| poliscidata | Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition |
| polished | Authentication, User Administration, and Hosting for 'shiny' Apps |
| polite | Be Nice on the Web |
| politeness | Detecting Politeness Features in Text |
| pollen | Analysis of Aerobiological Data |
| pollimetry | Estimate Pollinator Body Size and Co-Varying Ecological Traits |
| pollster | Calculate Crosstab and Topline Tables of Weighted Survey Data |
| polmineR | Verbs and Nouns for Corpus Analysis |
| polspline | Polynomial Spline Routines |
| polyaAeppli | Implementation of the Polya-Aeppli Distribution |
| polyapost | Simulating from the Polya Posterior |
| Polychrome | Qualitative Palettes with Many Colors |
| polyclip | Polygon Clipping |
| polycor | Polychoric and Polyserial Correlations |
| polyCub | Cubature over Polygonal Domains |
| polyfreqs | Bayesian Population Genomics in Autopolyploids |
| PolyHaplotyper | Assignment of Haplotypes Based on SNP Dosages in Diploids and Polyploids |
| polylabelr | Find the Pole of Inaccessibility (Visual Center) of a Polygon |
| polymapR | Linkage Analysis in Outcrossing Polyploids |
| polyMatrix | Infrastructure for Manipulation Polynomial Matrices |
| polynom | A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations |
| PolynomF | Polynomials in R |
| PolyPatEx | Paternity Exclusion in Autopolyploid Species |
| polypharmacy | Calculate Several Polypharmacy Indicators |
| polypoly | Helper Functions for Orthogonal Polynomials |
| polyqtlR | QTL Analysis in Autopolyploid Bi-Parental F1 Populations |
| polyRAD | Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids |
| polyreg | Polynomial Regression |
| polysat | Tools for Polyploid Microsatellite Analysis |
| polySegratio | Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids |
| polySegratioMM | Bayesian Mixture Models for Marker Dosage in Autopolyploids |
| PolyTrend | Trend Classification Algorithm |
| polywog | Bootstrapped Basis Regression with Oracle Model Selection |
| POMaSPU | Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU) |
| pomcheckr | Graphical Check for Proportional Odds Assumption |
| pomdp | Infrastructure for Partially Observable Markov Decision Processes (POMDP) |
| pomdpSolve | Interface to 'pomdp-solve' for Partially Observable Markov Decision Processes |
| Pomic | Pattern Oriented Modelling Information Criterion |
| pomodoro | Predictive Power of Linear and Tree Modeling |
| pomp | Statistical Inference for Partially Observed Markov Processes |
| pompom | Person-Oriented Method and Perturbation on the Model |
| pooh | Partial Orders and Relations |
| pool | Object Pooling |
| PooledCohort | Predict 10-Year Risk for Atherosclerotic Cardiovascular Disease |
| PooledMeanGroup | Pooled Mean Group Estimation of Dynamic Heterogenous Panels |
| poolfstat | Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data |
| pooling | Fit Poolwise Regression Models |
| poolr | Methods for Pooling P-Values from (Dependent) Tests |
| PoolTestR | Prevalence and Regression for Pool-Tested (Group-Tested) Data |
| poolVIM | Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance |
| poorman | A Poor Man's Dependency Free Recreation of 'dplyr' |
| pop | A Flexible Syntax for Population Dynamic Modelling |
| pop.lion | Models for Simulating Lion Populations |
| pop.wolf | Models for Simulating Wolf Populations |
| popbayes | Bayesian Model to Estimate Population Trends from Counts Series |
| popbio | Construction and Analysis of Matrix Population Models |
| popdemo | Demographic Modelling Using Projection Matrices |
| PoPdesign | Posterior Predictive (PoP) Design for Phase I Clinical Trials |
| PopED | Population (and Individual) Optimal Experimental Design |
| popEpi | Functions for Epidemiological Analysis using Population Data |
| PopGenome | An Efficient Swiss Army Knife for Population Genomic Analyses |
| popgenr | Accompaniment to Population Genetics with R: An Introduction for Life Scientists |
| PopGenReport | A Simple Framework to Analyse Population and Landscape Genetic Data |
| popkin | Estimate Kinship and FST under Arbitrary Population Structure |
| popPCR | Classify Digital PCR Droplets by Fitting Fluorescence Populations |
| poppr | Genetic Analysis of Populations with Mixed Reproduction |
| popPyramid | Population Pyramids |
| popReconstruct | Reconstruct Human Populations of the Recent Past |
| popsom | An Efficient Implementation of Kohonen's Self-Organizing Maps (SOMs) with Starburst Visualizations |
| popstudy | Applied Techniques to Demographic and Time Series Analysis |
| poptrend | Estimate Smooth and Linear Trends from Population Count Survey Data |
| population | Models for Simulating Populations |
| PopulationGrowthR | Linear Population Growth Scenarios |
| populationPDXdesign | Designing Population PDX Studies |
| populR | Population Downscaling |
| PopVar | Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation |
| porridge | Ridge-Type Penalized Estimation of a Potpourri of Models |
| PortalHacienda | Acceder Con R a Los Datos Del Portal De Hacienda |
| portalr | Create Useful Summaries of the Portal Data |
| portfolio | Analysing Equity Portfolios |
| portfolio.optimization | Contemporary Portfolio Optimization |
| PortfolioAnalytics | Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios |
| portfolioBacktest | Automated Backtesting of Portfolios over Multiple Datasets |
| PortfolioEffectEstim | High Frequency Price Estimators by PortfolioEffect |
| PortfolioEffectHFT | High Frequency Portfolio Analytics by PortfolioEffect |
| PortfolioOptim | Small/Large Sample Portfolio Optimization |
| PortRisk | Portfolio Risk Analysis |
| portsort | Factor-Based Portfolio Sorts |
| portvine | Vine Based (Un)Conditional Portfolio Risk Measure Estimation |
| POSetR | Partially Ordered Sets in R |
| PoSI | Valid Post-Selection Inference for Linear LS Regression |
| PosRatioDist | Quotient of Random Variables Conditioned to the Positive Quadrant |
| POSSA | Power Simulation for Sequential Analysis and Multiple Hypotheses |
| postcards | Create Beautiful, Simple Personal Websites |
| PostcodesioR | API Wrapper Around 'Postcodes.io' |
| posterdown | Generate PDF Conference Posters Using R Markdown |
| posterior | Tools for Working with Posterior Distributions |
| PosteriorBootstrap | Non-Parametric Sampling with Parallel Monte Carlo |
| postGGIR | Data Processing after Running 'GGIR' for Accelerometer Data |
| postGIStools | Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases |
| postHoc | Tools for Post-Hoc Analysis |
| postinfectious | Estimating the Incubation Period Distribution of Post-Infectious Syndrome |
| postlightmercury | Parses Web Pages using Postlight Mercury |
| postlogic | Infix and Postfix Logic Operators |
| POSTm | Phylogeny-Guided OTU-Specific Association Test for Microbiome Data |
| postpack | Utilities for Processing Posterior Samples Stored in 'mcmc.lists' |
| POT | Generalized Pareto Distribution and Peaks Over Threshold |
| potential | Implementation of the Potential Model |
| potools | Tools for Internationalization and Portability in R Packages |
| potts | Markov Chain Monte Carlo for Potts Models |
| PottsUtils | Utility Functions of the Potts Models |
| pould | Phased or Unphased Linkage Disequilibrium |
| POUMM | The Phylogenetic Ornstein-Uhlenbeck Mixed Model |
| POV | Partition of Variation Variance Component Analysis Method |
| povcalnetR | Client for the 'Povcalnet' API |
| pow.int | Binary Exponentiation |
| powdist | Power and Reversal Power Distributions |
| powdR | Full Pattern Summation of X-Ray Powder Diffraction Data |
| Power2Stage | Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies |
| powerbydesign | Power Estimates for ANOVA Designs |
| powerCompRisk | Power Analysis Tool for Joint Testing Hazards with Competing Risks Data |
| powerEQTL | Power and Sample Size Calculation for Bulk Tissue and Single-Cell eQTL Analysis |
| powerGWASinteraction | Power Calculations for GxE and GxG Interactions for GWAS |
| powerHaDeX | Efficient Simulation of HDX-MS Data and Tools for the Statistical Analysis |
| powerjoin | Extensions of 'dplyr' and 'fuzzyjoin' Join Functions |
| powerLATE | Generalized Power Analysis for LATE |
| poweRlaw | Analysis of Heavy Tailed Distributions |
| powerly | Sample Size Analysis for Psychological Networks and More |
| powerMediation | Power/Sample Size Calculation for Mediation Analysis |
| PowerNormal | Power Normal Distribution |
| powerpkg | Power Analyses for the Affected Sib Pair and the TDT Design |
| powerplus | Exponentiation Operations |
| powerSurvEpi | Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies |
| PowerTOST | Power and Sample Size for (Bio)Equivalence Studies |
| PowerUpR | Power Analysis Tools for Multilevel Randomized Experiments |
| PP | Person Parameter Estimation |
| PP3 | Three-Dimensional Exploratory Projection Pursuit |
| ppcc | Probability Plot Correlation Coefficient Test |
| PPCI | Projection Pursuit for Cluster Identification |
| ppclust | Probabilistic and Possibilistic Cluster Analysis |
| ppcong | Interfacing with ProPublica's 'Congress' API |
| ppcor | Partial and Semi-Partial (Part) Correlation |
| ppcSpatial | Spatial Analysis of Pakistan Population Census |
| ppdiag | Diagnosis and Visualizations Tools for Temporal Point Processes |
| PPforest | Projection Pursuit Classification Forest |
| ppgam | Generalised Additive Point Process Models |
| ppgmmga | Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms |
| ppitables | Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI) |
| ppmf | Read Census Privacy Protected Microdata Files |
| ppmHR | Privacy-Protecting Hazard Ratio Estimation in Distributed Data Networks |
| ppmlasso | Point Process Models with LASSO-Type Penalties |
| PPMR | Probabilistic Two Sample Mendelian Randomization |
| ppmSuite | A Collection of Models that Employ a Product Partition Distribution as a Prior on Partitions |
| PPQplan | Process Performance Qualification (PPQ) Plans in Chemistry, Manufacturing and Controls (CMC) Statistical Analysis |
| PPRL | Privacy Preserving Record Linkage |
| pps | PPS Sampling |
| ppsbm | Clustering in Longitudinal Networks |
| ppseq | Design Clinical Trials using Sequential Predictive Probability Monitoring |
| PPSFS | Partial Profile Score Feature Selection in High-Dimensional Generalized Linear Interaction Models |
| ppsr | Predictive Power Score |
| PPtreeViz | Projection Pursuit Classification Tree Visualization |
| pqantimalarials | web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa |
| PQLseq | Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies |
| prabclus | Functions for Clustering and Testing of Presence-Absence, Abundance and Multilocus Genetic Data |
| pracma | Practical Numerical Math Functions |
| PracticalEquiDesign | Design of Practical Equivalence Trials |
| PracTools | Tools for Designing and Weighting Survey Samples |
| prais | Prais-Winsten Estimator for AR(1) Serial Correlation |
| praise | Praise Users |
| praznik | Tools for Information-Based Feature Selection and Scoring |
| prcbench | Testing Workbench for Precision-Recall Curves |
| prclust | Penalized Regression-Based Clustering Method |
| prcr | Person-Centered Analysis |
| PRDA | Conduct a Prospective or Retrospective Design Analysis |
| pre | Prediction Rule Ensembles |
| PRECAST | Embedding and Clustering with Alignment for Spatial Datasets |
| precintcon | Precipitation Intensity, Concentration and Anomaly Analysis |
| pRecipe | A Multiscale Framework for Data Analysis of Global Precipitation |
| precisely | Estimate Sample Size Based on Precision Rather than Power |
| precisePlacement | Suite of Functions to Help Get Plot Elements Exactly Where You Want Them |
| PreciseSums | Accurate Floating Point Sums and Products |
| precommit | Pre-Commit Hooks |
| precrec | Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves |
| PredCRG | Computational Prediction of Proteins Encoded by Circadian Genes |
| predfairness | Discrimination Mitigation for Machine Learning Models |
| predhy | Genomic Prediction of Hybrid Performance |
| predict3d | Draw Three Dimensional Predict Plot Using Package 'rgl' |
| PredictABEL | Assessment of Risk Prediction Models |
| prediction | Tidy, Type-Safe 'prediction()' Methods |
| predictionInterval | Prediction Interval Functions for Assessing Replication Study Results |
| PredictionR | Prediction for Future Data from any Continuous Distribution |
| predictMe | Visualize Individual Prediction Performance |
| predictmeans | Calculate Predicted Means for Linear Models |
| predictoR | Predictive Data Analysis System |
| predictrace | Predict the Race and Gender of a Given Name Using Census and Social Security Administration Data |
| predieval | Assessing Performance of Prediction Models for Predicting Patient-Level Treatment Benefit |
| predint | Prediction Intervals |
| predkmeans | Covariate Adaptive Clustering |
| PredPsych | Predictive Approaches in Psychology |
| predReliability | Estimates Reliability of Individual Supervised Learning Predictions |
| predtools | Prediction Model Tools |
| predtoolsTS | Time Series Prediction Tools |
| prefeR | R Package for Pairwise Preference Elicitation |
| preferably | A 'pkgdown' Template |
| preference | 2-Stage Preference Trial Design and Analysis |
| prefmod | Utilities to Fit Paired Comparison Models for Preferences |
| PreKnitPostHTMLRender | Pre-Knitting Processing and Post HTML-Rendering Processing |
| PReMiuM | Dirichlet Process Bayesian Clustering, Profile Regression |
| prenoms | Names Given to Babies in Quebec Between 1980 and 2020 |
| prepdat | Preparing Experimental Data for Statistical Analysis |
| prepplot | Prepare Figure Region for Base Graphics |
| PreProcess | Basic Functions for Pre-Processing Microarrays |
| PreProcessing | Various Preprocessing Transformations of Numeric Data Matrices |
| PREPShiny | Interactive Document for Preprocessing the Dataset |
| preputils | Utilities for Preparation of Data Analysis |
| prereg | R Markdown Templates to Preregister Scientific Studies |
| preregr | Specify (Pre)Registrations and Export Them Human- And Machine-Readably |
| PresenceAbsence | Presence-Absence Model Evaluation |
| presens | Interface for PreSens Fiber Optic Data |
| presenter | Present Data with Style |
| presentes | Registry of Victims of State Terrorism in Argentina |
| preseqR | Predicting Species Accumulation Curves |
| PResiduals | Probability-Scale Residuals and Residual Correlations |
| presize | Precision Based Sample Size Calculation |
| presmTP | Methods for Transition Probabilities |
| presser | Lightweight Web Server for Testing |
| PressPurt | Indeterminacy of Networks via Press Perturbations |
| prettifyAddins | 'RStudio' Addins to Prettify 'JavaScript', 'C++', 'Python', and More |
| prettyB | Pretty Base Graphics |
| prettycode | Pretty Print R Code in the Terminal |
| prettydoc | Creating Pretty Documents from R Markdown |
| prettyglm | Pretty Summaries of Generalized Linear Model Coefficients |
| prettyGraphs | Publication-Quality Graphics |
| prettymapr | Scale Bar, North Arrow, and Pretty Margins in R |
| prettyR | Pretty Descriptive Stats |
| prettyunits | Pretty, Human Readable Formatting of Quantities |
| prevalence | Tools for Prevalence Assessment Studies |
| prevederer | Wrapper for the 'Prevedere' API |
| previsionio | 'Prevision.io' R SDK |
| PrevMap | Geostatistical Modelling of Spatially Referenced Prevalence Data |
| prevR | Estimating Regional Trends of a Prevalence from a DHS and Similar Surveys |
| prevtoinc | Prevalence to Incidence Calculations for Point-Prevalence Studies in a Nosocomial Setting |
| prewas | Data Pre-Processing for Bacterial Genome-Wide Association Studies |
| pRF | Permutation Significance for Random Forests |
| PriceIndices | Calculating Bilateral and Multilateral Price Indexes |
| priceR | Economics and Pricing Tools |
| pricesensitivitymeter | Van Westendorp Price Sensitivity Meter Analysis |
| prider | Multiplexed Primer Design by Linear Set Coverage Approximation |
| prim | Patient Rule Induction Method (PRIM) |
| PRIMAL | Parametric Simplex Method for Sparse Learning |
| primate | Tools and Methods for Primatological Data Science |
| primefactr | Use Prime Factorization for Computations |
| primePCA | Projected Refinement for Imputation of Missing Entries in PCA |
| primer | Functions and Data for the Book, a Primer of Ecology with R |
| primerTree | Visually Assessing the Specificity and Informativeness of Primer Pairs |
| primes | Fast Functions for Prime Numbers |
| PRIMME | Eigenvalues and Singular Values and Vectors from Large Matrices |
| princurve | Fit a Principal Curve in Arbitrary Dimension |
| printr | Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format |
| prinvars | Principal Variables |
| prioGene | Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information |
| PriorGen | Generates Prior Distributions for Proportions |
| prioriactions | Multi-Action Conservation Planning |
| prioritizr | Systematic Conservation Prioritization in R |
| prioritizrdata | Conservation Planning Datasets |
| prioritylasso | Analyzing Multiple Omics Data with an Offset Approach |
| prism | Access Data from the Oregon State Prism Climate Project |
| PRISM.forecast | Penalized Regression with Inferred Seasonality Module - Forecasting Unemployment Initial Claims using 'Google Trends' Data |
| PRISMA | Protocol Inspection and State Machine Analysis |
| PRISMA2020 | Make Interactive 'PRISMA' Flow Diagrams |
| prismadiagramR | Creates a Prisma Diagram using 'DiagrammeR' |
| PRISMAstatement | Plot Flow Charts According to the "PRISMA" Statement |
| prismatic | Color Manipulation Tools |
| prisonbrief | Downloads and Parses World Prison Brief Data |
| prithulib | Perform Random Experiments |
| PrivateLR | Differentially Private Regularized Logistic Regression |
| prnsamplr | Permanent Random Number Sampling |
| pro | Point-Process Response Model for Optogenetics |
| ProAE | PRO-CTCAE Scoring, Analysis, and Graphical Tools |
| probably | Tools for Post-Processing Class Probability Estimates |
| ProbBayes | Probability and Bayesian Modeling |
| ProbeDeveloper | Develop Hybridization Probes |
| ProbitSpatial | Probit with Spatial Dependence, SAR, SEM and SARAR Models |
| ProbMarg | Computing Logit & Probit Predicted Probabilities & Marginal Effects |
| probout | Unsupervised Multivariate Outlier Probabilities for Large Datasets |
| ProbReco | Score Optimal Probabilistic Forecast Reconciliation |
| ProbSamplingI | Probabilistic Sampling Design and Strategies |
| PROBShiny | Interactive Document for Working with Basic Probability |
| ProbYX | Inference for the Stress-Strength Model R = P(Y<X) |
| pROC | Display and Analyze ROC Curves |
| proccalibrad | Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT |
| ProcData | Process Data Analysis |
| proceduralnames | Several Methods for Procedural Name Generation |
| processanimateR | Process Map Token Replay Animation |
| processcheckR | Rule-Based Conformance Checking of Business Process Event Data |
| processmapR | Construct Process Maps Using Event Data |
| processmonitR | Building Process Monitoring Dashboards |
| processR | Implementation of the 'PROCESS' Macro |
| processx | Execute and Control System Processes |
| procmaps | Portable Address Space Mapping |
| ProcMod | Informative Procrustean Matrix Correlation |
| ProDenICA | Product Density Estimation for ICA using Tilted Gaussian Density Estimates |
| prodest | Production Function Estimation |
| prodigenr | Research Project Directory Generator |
| prodlim | Product-Limit Estimation for Censored Event History Analysis |
| productivity | Indices of Productivity Using Data Envelopment Analysis (DEA) |
| productplots | Product Plots for R |
| prof.tree | An Alternative Display Profiling Data as Tree Structure |
| ProfessR | Grades Setting and Exam Maker |
| profExtrema | Compute and Visualize Profile Extrema Functions |
| proffer | Profile R Code and Visualize with 'Pprof' |
| profile | Read, Manipulate, and Write Profiler Data |
| ProfileLikelihood | Profile Likelihood for a Parameter in Commonly Used Statistical Models |
| profileModel | Profiling Inference Functions for Various Model Classes |
| profileR | Profile Analysis of Multivariate Data in R |
| profmem | Simple Memory Profiling for R |
| profoc | Probabilistic Forecast Combination Using CRPS Learning |
| ProFound | Photometry Tools |
| ProfoundData | Downloading and Exploring Data from the PROFOUND Database |
| profr | An Alternative Display for Profiling Information |
| proftools | Profile Output Processing Tools for R |
| profvis | Interactive Visualizations for Profiling R Code |
| progenyClust | Finding the Optimal Cluster Number Using Progeny Clustering |
| progress | Terminal Progress Bars |
| progressr | An Inclusive, Unifying API for Progress Updates |
| PROJ | Generic Coordinate System Transformations Using 'PROJ' |
| proj4 | A simple interface to the PROJ.4 cartographic projections library |
| ProjectionBasedClustering | Projection Based Clustering |
| projections | Project Future Case Incidence |
| ProjectManagement | Management of Deterministic and Stochastic Projects |
| projects | A Project Infrastructure for Researchers |
| ProjectTemplate | Automates the Creation of New Statistical Analysis Projects |
| projmgr | Task Tracking and Project Management with GitHub |
| projpred | Projection Predictive Feature Selection |
| ProliferativeIndex | Calculates and Analyzes the Proliferative Index |
| prome | Patient-Reported Outcome Data Analysis with Stan |
| PROMETHEE | Preference Ranking Organization METHod for Enrichment of Evaluations |
| promethee123 | PROMETHEE I, II, and III Methods |
| promises | Abstractions for Promise-Based Asynchronous Programming |
| promor | Proteomics Data Analysis and Modeling Tools |
| promote | Client for the 'Alteryx Promote' API |
| promotionImpact | Analysis & Measurement of Promotion Effectiveness |
| prompt | Dynamic 'R' Prompt |
| prompter | Add Tooltips in 'Shiny' Apps with 'Hint.css' |
| prop.comb.RR | Analyzing Combination of Proportions and Relative Risk |
| propagate | Propagation of Uncertainty |
| PropCIs | Various Confidence Interval Methods for Proportions |
| PropClust | Propensity Clustering and Decomposition |
| properties | Parse 'Java' Properties Files for 'R Service Bus' Applications |
| prophet | Automatic Forecasting Procedure |
| propOverlap | Feature (gene) selection based on the Proportional Overlapping Scores |
| propr | Calculating Proportionality Between Vectors of Compositional Data |
| PropScrRand | Propensity Score Methods for Assigning Treatment in Randomized Trials |
| proPubBills | 'ProPublica' U.S. Congress Bills API Wrapper |
| ProPublicaR | Access Functions for ProPublica's APIs |
| PROreg | Patient Reported Outcomes Regression Analysis |
| PROscorer | Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments |
| PROscorerTools | Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures |
| PROsetta | Linking Patient-Reported Outcomes Measures |
| ProSGPV | Penalized Regression with Second-Generation P-Values |
| prospectr | Miscellaneous Functions for Processing and Sample Selection of Spectroscopic Data |
| PROSPER | Simulation of Weed Population Dynamics |
| protag | Search Tagged Peptides & Draw Highlighted Mass Spectra |
| protein8k | Perform Analysis and Create Visualizations of Proteins |
| proteus | Multiform Seq2Seq Model for Time-Feature Analysis |
| proto | Prototype Object-Based Programming |
| protoclust | Hierarchical Clustering with Prototypes |
| protolite | Highly Optimized Protocol Buffer Serializers |
| proton | The Proton Game |
| protoshiny | Interactive Dendrograms for Visualizing Hierarchical Clusters with Prototypes |
| prototest | Inference on Prototypes from Clusters of Features |
| protr | Generating Various Numerical Representation Schemes for Protein Sequences |
| ProTrackR | Manipulate and Play 'ProTracker' Modules |
| protti | Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools |
| protViz | Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics |
| proustr | Tools for Natural Language Processing in French |
| provDebugR | A Time-Travelling Debugger |
| provenance | Statistical Toolbox for Sedimentary Provenance Analysis |
| proverbs | Print a Daily Bible Proverb to Console |
| provExplainR | Compare Provenance Collections to Explain Changed Script Outputs |
| provGraphR | Creates Adjacency Matrices for Lineage Searches |
| provParseR | Pulls Information from Prov.Json Files |
| provSummarizeR | Summarizes Provenance Related to Inputs and Outputs of a Script or Console Commands |
| provTraceR | Uses Provenance to Trace File Lineage for One or more R Scripts |
| provViz | Provenance Visualizer |
| proxirr | Alpha and Beta Proximity to Irreplaceability |
| proxy | Distance and Similarity Measures |
| proxyC | Computes Proximity in Large Sparse Matrices |
| prozor | Minimal Protein Set Explaining Peptide Spectrum Matches |
| PRP | Bayesian Prior and Posterior Predictive Replication Assessment |
| prrd | Parallel Runs of Reverse Depends |
| PRROC | Precision-Recall and ROC Curves for Weighted and Unweighted Data |
| PRSPGx | Construct PGx PRS |
| pRSR | Test of Periodicity using Response Surface Regression |
| prt | Tabular Data Backed by Partitioned 'fst' Files |
| prWarp | Warping Landmark Configurations |
| pryr | Tools for Computing on the Language |
| Przewodnik | Datasets and Functions Used in the Book 'Przewodnik po Pakiecie R' |
| ps | List, Query, Manipulate System Processes |
| PSAgraphics | Propensity Score Analysis Graphics |
| psbcGroup | Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors |
| psborrow | Bayesian Dynamic Borrowing with Propensity Score |
| PSCBS | Analysis of Parent-Specific DNA Copy Numbers |
| pscl | Political Science Computational Laboratory |
| pscore | Standardizing Physiological Composite Risk Endpoints |
| psd | Adaptive, Sine-Multitaper Power Spectral Density and Cross Spectrum Estimation |
| psda | Polygonal Symbolic Data Analysis |
| psData | Download Regularly Maintained Political Science Data Sets |
| psdr | Use Time Series to Generate and Compare Power Spectral Density |
| pseudo | Computes Pseudo-Observations for Modeling |
| pseudorank | Pseudo-Ranks |
| pseval | Methods for Evaluating Principal Surrogates of Treatment Response |
| PSF | Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm |
| psfmi | Prediction Model Pooling, Selection and Performance Evaluation Across Multiply Imputed Datasets |
| PSGD | Projected Subset Gradient Descent |
| psgp | Projected Spatial Gaussian Process Methods |
| psica | Decision Tree Analysis for Probabilistic Subgroup Identification with Multiple Treatments |
| psidR | Build Panel Data Sets from PSID Raw Data |
| PSLM2015 | Pakistan Social and Living Standards Measurement Survey 2014-15 |
| pso | Particle Swarm Optimization |
| psoptim | Particle Swarm Optimization |
| psp | Parameter Space Partitioning MCMC for Global Model Evaluation |
| pspatreg | Spatial and Spatio-Temporal Semiparametric Regression Models with Spatial Lags |
| pspearman | Spearman's Rank Correlation Test |
| pspline | Penalized Smoothing Splines |
| pspline.inference | Estimation of Characteristics of Seasonal and Sporadic Infectious Disease Outbreaks Using Generalized Additive Modeling with Penalized Basis Splines |
| PSPManalysis | Analysis of Physiologically Structured Population Models |
| psqn | Partially Separable Quasi-Newton |
| psr | Functions for Analyzing Performance Science Data |
| psre | Presenting Statistical Results Effectively |
| psrwe | PS-Integrated Methods for Incorporating RWE in Clinical Studies |
| PSS.Health | Power and Sample Size for Health Researchers via Shiny |
| PSSIM | Test of Independence & Image Structural Similarity Measure PSSIM |
| PSSMCOOL | Features Extracted from Position Specific Scoring Matrix (PSSM) |
| pssmooth | Flexible and Efficient Evaluation of Principal Surrogates/Treatment Effect Modifiers |
| psSubpathway | Flexible Identification of Phenotype-Specific Subpathways |
| PST | Probabilistic Suffix Trees and Variable Length Markov Chains |
| Pstat | Assessing Pst Statistics |
| pstest | Specification Tests for Parametric Propensity Score Models |
| PSW | Propensity Score Weighting Methods for Dichotomous Treatments |
| PSweight | Propensity Score Weighting for Causal Inference with Observational Studies and Randomized Trials |
| psy | Various Procedures Used in Psychometrics |
| psych | Procedures for Psychological, Psychometric, and Personality Research |
| psychmeta | Psychometric Meta-Analysis Toolkit |
| psycho | Efficient and Publishing-Oriented Workflow for Psychological Science |
| psychometric | Applied Psychometric Theory |
| psychomix | Psychometric Mixture Models |
| psychonetrics | Structural Equation Modeling and Confirmatory Network Analysis |
| psychotools | Psychometric Modeling Infrastructure |
| psychotree | Recursive Partitioning Based on Psychometric Models |
| psychReport | Reproducible Reports in Psychology |
| psychrolib | Psychrometric Properties of Moist and Dry Air |
| psychtm | Text Mining Methods for Psychological Research |
| psychTools | Tools to Accompany the 'psych' Package for Psychological Research |
| psycModel | Integrated Toolkit for Psychological Analysis and Modeling in R |
| PsyControl | CUSUM Person Fit Statistics |
| psymetadata | Open Datasets from Meta-Analyses in Psychology Research |
| psymonitor | Real Time Monitoring of Asset Markets: Bubbles and Crisis |
| psyntur | Helper Tools for Teaching Statistical Data Analysis |
| psyphy | Functions for Analyzing Psychophysical Data in R |
| psyverse | Decentralized Unequivocality in Psychological Science |
| PTAk | Principal Tensor Analysis on k Modes |
| PTE | Personalized Treatment Evaluator |
| ptest | Periodicity Tests in Short Time Series |
| ptf | Probit Tensor Factorization |
| ptinpoly | Point-in-Polyhedron Test (2D and 3D) |
| pTITAN2 | Permutations of Treatment Labels and TITAN2 Analysis |
| ptm | Analyses of Protein Post-Translational Modifications |
| ptmixed | Poisson-Tweedie Generalized Linear Mixed Model |
| ptools | Tools for Poisson Data |
| PtProcess | Time Dependent Point Process Modelling |
| pts2polys | Construct Polygons Summarising the Location and Variability of Point Sets |
| ptspotter | Helper Functions for Use with "ProjectTemplate" |
| PTSR | Positive Time Series Regression |
| ptsuite | Tail Index Estimation for Power Law Distributions |
| ptvapi | Access the 'Public Transport Victoria' Timetable API |
| ptw | Parametric Time Warping |
| ptwikiwords | Words Used in Portuguese Wikipedia |
| PTwins | Percentile Estimation of Fetal Weight for Twins by Chorionicity |
| PTXQC | Quality Report Generation for MaxQuant and mzTab Results |
| ptycho | Bayesian Variable Selection with Hierarchical Priors |
| pubchunks | Fetch Sections of XML Scholarly Articles |
| pubh | A Toolbox for Public Health and Epidemiology |
| PublicationBias | Sensitivity Analysis for Publication Bias in Meta-Analyses |
| publipha | Bayesian Meta-Analysis with Publications Bias and P-Hacking |
| Publish | Format Output of Various Routines in a Suitable Way for Reports and Publication |
| pubmed.mineR | Text Mining of PubMed Abstracts |
| PubMedMining | Text-Mining of the 'PubMed' Repository |
| pubmedR | Gathering Metadata About Publications, Grants, Clinical Trials from 'PubMed' Database |
| PubMedWordcloud | 'Pubmed' Word Clouds |
| pubtatordb | Create and Query a Local 'PubTator' Database |
| pullword | R Interface to Pullword Service |
| puls | Partitioning Using Local Subregions |
| pulsar | Parallel Utilities for Lambda Selection along a Regularization Path |
| pulseTD | Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data |
| pumilioR | Pumilio in R |
| PUMP | Power Under Multiplicity Project |
| puniform | Meta-Analysis Methods Correcting for Publication Bias |
| PUPAIM | A Collection of Physical and Chemical Adsorption Isotherm Models |
| PUPAK | Parameter Estimation, and Plot Visualization of Adsorption Kinetic Models |
| PupillometryR | A Unified Pipeline for Pupillometry Data |
| PupilPre | Preprocessing Pupil Size Data |
| PUPMCR | Color Identification of Fungi Based on Rayner (1970) and Known Fungal Pigment Association |
| PUPMSI | Moisture Sorption Isotherm Modeling Program |
| pureseqtmr | Predict Transmembrane Protein Topology |
| purge | Purge Training Data from Models |
| purgeR | Inbreeding-Purging Estimation in Pedigreed Populations |
| purging | Simple Method for Purging Mediation Effects among Independent Variables |
| purrr | Functional Programming Tools |
| purrrlyr | Tools at the Intersection of 'purrr' and 'dplyr' |
| Pursuit | Projection Pursuit |
| pushbar | Create Sliders for 'Shiny' |
| pushoverr | Send Push Notifications using 'Pushover' |
| puzzle | Assembling Data Sets for Non-Linear Mixed Effects Modeling |
| PVAClone | Population Viability Analysis with Data Cloning |
| pvaluefunctions | Creates and Plots P-Value Functions, S-Value Functions, Confidence Distributions and Confidence Densities |
| pvar | Calculation and Application of p-Variation |
| pvclass | P-Values for Classification |
| pvclust | Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling |
| pvcurveanalysis | Analysis of Pressure Volume Curves |
| pvldcurve | Simplifies the Analysis of Pressure Volume and Leaf Drying Curves |
| pvLRT | Likelihood Ratio Test-Based Approaches to Pharmacovigilance |
| PVplr | Performance Loss Rate Analysis Pipeline |
| PVR | Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve |
| PWD | Time Series Regression Using the Power Weighted Densities (PWD) Approach |
| PWEALL | Design and Monitoring of Survival Trials Accounting for Complex Situations |
| PWFSLSmoke | Utilities for Working with Air Quality Monitoring Data |
| pwlmm | PWIGLS for Two-Level Multivariate and Multilevel Linear Models |
| pwr | Basic Functions for Power Analysis |
| pwr2 | Power and Sample Size Analysis for One-way and Two-way ANOVA Models |
| pwr2ppl | Power Analyses for Common Designs (Power to the People) |
| pwrAB | Power Analysis for AB Testing |
| pwrFDR | FDR Power |
| PwrGSD | Power in a Group Sequential Design |
| pwrRasch | Statistical Power Simulation for Testing the Rasch Model |
| pwt | Penn World Table (Versions 5.6, 6.x, 7.x) |
| pwt10 | Penn World Table (Version 10.x) |
| pwt8 | Penn World Table (Version 8.x) |
| pwt9 | Penn World Table (Version 9.x) |
| pxR | PC-Axis with R |
| pxweb | R Interface to PXWEB APIs |
| PxWebApiData | PX-Web Data by API |
| pyinit | Pena-Yohai Initial Estimator for Robust S-Regression |
| pylintR | Lint 'Python' Files with a R Command or a 'RStudio' Addin |
| pyMTurkR | A Client for the 'MTurk' Requester API |
| pyramid | Draw Population Pyramid |
| pysd2r | API to 'Python' Library 'pysd' |
| pzfx | Read and Write 'GraphPad Prism' Files |
| Q2q | Interpolating Age-Specific Mortality Rates at All Ages |
| Q7 | Types and Features for Object Oriented Programming |
| qacBase | Functions to Facilitate Exploratory Data Analysis |
| qad | Quantification of Asymmetric Dependence |
| QAIG | Automatic Item Generator for Quantitative Multiple-Choice Items |
| qap | Heuristics for the Quadratic Assignment Problem (QAP) |
| qape | Quantile of Absolute Prediction Errors |
| Qapprox | Approximation to the Survival Functions of Quadratic Forms of Gaussian Variables |
| qat | Quality Assurance Toolkit |
| qbld | Quantile Regression for Binary Longitudinal Data |
| QBMS | Query the Breeding Management System(s) |
| qboxplot | Quantile-Based Boxplot |
| qbr | Access the 'Quickbase' JSON API |
| QCA | Qualitative Comparative Analysis |
| QCAcluster | Tools for the Analysis of Clustered Data in QCA |
| qcapower | Estimate Power and Required Sample Size in QCA |
| QCApro | Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis |
| QCAtools | Helper Functions for QCA in R |
| qCBA | Quantitative Classification by Association Rules |
| qcc | Quality Control Charts |
| qccrs | Quality Control Charts under Repetitive Sampling |
| QCEWAS | Fast and Easy Quality Control of EWAS Results Files |
| QCGWAS | Quality Control of Genome Wide Association Study Results |
| qch | Query Composed Hypotheses |
| qcpm | Quantile Composite Path Modeling |
| qcQpcr | Histone ChIP-Seq qPCR Analyzer |
| qcr | Quality Control Review |
| QCSimulator | A 5-Qubit Quantum Computing Simulator |
| QCSIS | Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation |
| qcv | Quantifying Construct Validity |
| qdap | Bridging the Gap Between Qualitative Data and Quantitative Analysis |
| qdapDictionaries | Dictionaries and Word Lists for the 'qdap' Package |
| qdapRegex | Regular Expression Removal, Extraction, and Replacement Tools |
| qdapTools | Tools for the 'qdap' Package |
| QDComparison | Modern Nonparametric Tools for Two-Sample Quantile and Distribution Comparisons |
| QDiabetes | Type 2 Diabetes Risk Calculator |
| qdm | Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments |
| Qest | Quantile-Based Estimator |
| QF | Density, Cumulative and Quantile Functions of Quadratic Forms |
| QFASA | Quantitative Fatty Acid Signature Analysis |
| qfasar | Quantitative Fatty Acid Signature Analysis in R |
| QFRM | Pricing of Vanilla and Exotic Option Contracts |
| qgam | Smooth Additive Quantile Regression Models |
| QGameTheory | Quantum Game Theory Simulator |
| qGaussian | The q-Gaussian Distribution |
| qgcomp | Quantile G-Computation |
| qgcompint | Quantile G-Computation Extensions for Effect Measure Modification |
| qgg | Statistical Tools for Quantitative Genetic Analyses |
| QGglmm | Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models |
| qgraph | Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation |
| qgshiny | A 'shiny' Application for Active Learning Instruction in Introductory Quantitative Genetics |
| qgtools | Generalized Quantitative Genetics Data Analyses |
| qha | Qualitative Harmonic Analysis |
| QHOT | QTL Hotspot Detection |
| QHScrnomo | Construct Nomogram for Competing Risk Models |
| QI | Quantity-Intensity Relationship of Soil Potassium |
| qicharts | Quality Improvement Charts |
| qicharts2 | Quality Improvement Charts |
| qif | Quadratic Inference Function |
| qiitr | R Interface to Qiita API |
| qkerntool | Q-Kernel-Based and Conditionally Negative Definite Kernel-Based Machine Learning Tools |
| qlcal | R Bindings to the Calendaring Functionality of 'QuantLib' |
| qlcMatrix | Utility Sparse Matrix Functions for Quantitative Language Comparison |
| QLearning | Reinforcement Learning using the Q Learning Algorithm |
| qmap | Statistical Transformations for Post-Processing Climate Model Output |
| qmethod | Analysis of Subjective Perspectives Using Q Methodology |
| qMRI | Methods for Quantitative Magnetic Resonance Imaging ('qMRI') |
| qmrparser | Parser Combinator in R |
| qmvs | Queueing Model of Visual Search |
| qoi | Read and Write QOI Images |
| QoLMiss | Scales Score Calculation from Quality of Life Data |
| qpcR | Modelling and Analysis of Real-Time PCR Data |
| qPCRtools | Tools for qPCR |
| qpdf | Split, Combine and Compress PDF Files |
| qpmadr | Interface to the 'qpmad' Quadratic Programming Solver |
| QPmin | Linearly Constrained Indefinite Quadratic Program Solver |
| qpNCA | Noncompartmental Pharmacokinetic Analysis by qPharmetra |
| qqboxplot | Implementation of the Q-Q Boxplot |
| qqconf | Creates Simultaneous Testing Bands for QQ-Plots |
| qqman | Q-Q and Manhattan Plots for GWAS Data |
| QQperm | Permutation Based QQ Plot and Inflation Factor Estimation |
| qqplotr | Quantile-Quantile Plot Extensions for 'ggplot2' |
| qqtest | Self Calibrating Quantile-Quantile Plots for Visual Testing |
| qqvases | Animated Normal Quantile-Quantile Plots |
| QR | QR Factorization without Pivoting |
| qra | Quantal Response Analysis for Dose-Mortality Data |
| QRAGadget | A 'Shiny' Gadget for Interactive 'QRA' Visualizations |
| qrage | Tools that Create D3 JavaScript Force Directed Graph from R |
| qrandom | True Random Numbers using the ANU Quantum Random Numbers Server |
| QRank | A Novel Quantile Regression Approach for eQTL Discovery |
| qrcm | Quantile Regression Coefficients Modeling |
| qrcmNP | Nonlinear and Penalized Quantile Regression Coefficients Modeling |
| qrcode | Generate QRcodes with R |
| QregBB | Block Bootstrap Methods for Quantile Regression in Time Series |
| QRegVCM | Quantile Regression in Varying-Coefficient Models |
| qrencoder | Quick Response Code (QR Code) / Matrix Barcode Creator |
| QRIpkg | Quantile Regression Index Score |
| QRISK3 | 10-Year Cardiovascular Disease Risk Calculator (QRISK3 2017) |
| qrjoint | Joint Estimation in Linear Quantile Regression |
| QRM | Provides R-Language Code to Examine Quantitative Risk Management Concepts |
| qrmdata | Data Sets for Quantitative Risk Management Practice |
| qrmix | Quantile Regression Mixture Models |
| qrmtools | Tools for Quantitative Risk Management |
| qrng | (Randomized) Quasi-Random Number Generators |
| qrnn | Quantile Regression Neural Network |
| qs | Quick Serialization of R Objects |
| QSARdata | Quantitative Structure Activity Relationship (QSAR) Data Sets |
| qsimulatR | A Quantum Computer Simulator |
| qsort | Scoring Q-Sort Data |
| qsplines | Quaternions Splines |
| qst | Store Tables in SQL Database |
| qsub | Running Commands Remotely on 'Gridengine' Clusters |
| qtl | Tools for Analyzing QTL Experiments |
| QTL.gCIMapping | QTL Genome-Wide Composite Interval Mapping |
| QTL.gCIMapping.GUI | QTL Genome-Wide Composite Interval Mapping with Graphical User Interface |
| qtl2 | Quantitative Trait Locus Mapping in Experimental Crosses |
| qtl2convert | Convert Data among QTL Mapping Packages |
| qtl2fst | Database Storage of Genotype Probabilities for QTL Mapping |
| qtl2ggplot | Data Visualization for QTL Experiments |
| qtl2pattern | Pattern Support for 'qtl2' Package |
| qtl2pleio | Testing Pleiotropy in Multiparental Populations |
| qtlbook | Datasets for the R/qtl Book |
| qtlc | Densitometric Analysis of Thin-Layer Chromatography Plates |
| qtlcharts | Interactive Graphics for QTL Experiments |
| QTLEMM | QTL Mapping and Hotspots Detection |
| qtlhot | Inference for QTL Hotspots |
| qtlmt | Tools for Mapping Multiple Complex Traits |
| qtlnet | Causal Inference of QTL Networks |
| qtlpoly | Random-Effect Multiple QTL Mapping in Autopolyploids |
| QTLRel | Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees |
| QTOCen | Quantile-Optimal Treatment Regimes with Censored Data |
| Qtools | Utilities for Quantiles |
| quadcleanR | Cleanup and Visualization of Quadrat Data |
| quadmatrix | Solving Quadratic Matrix Equations |
| quadmesh | Quadrangle Mesh |
| quadprog | Functions to Solve Quadratic Programming Problems |
| quadprogXT | Quadratic Programming with Absolute Value Constraints |
| QuadRoot | Quadratic Root for any Quadratic Equation |
| quadrupen | Sparsity by Worst-Case Quadratic Penalties |
| quadtree | Region Quadtrees for Spatial Data |
| qualCI | Causal Inference with Qualitative and Ordinal Information on Outcomes |
| qualmap | Opinionated Approach for Digitizing Semi-Structured Qualitative GIS Data |
| qualpalr | Automatic Generation of Qualitative Color Palettes |
| qualtRics | Download 'Qualtrics' Survey Data |
| qualV | Qualitative Validation Methods |
| qualvar | Implements Indices of Qualitative Variation Proposed by Wilcox (1973) |
| QUALYPSO | Partitioning Uncertainty Components of an Incomplete Ensemble of Climate Projections |
| qualypsoss | Uncertainties of Climate Projections using Smoothing Splines |
| Quandl | API Wrapper for Quandl.com |
| quantCurves | Estimate Quantiles Curves |
| quantdates | Manipulate Dates for Finance |
| quantdr | Dimension Reduction Techniques for Conditional Quantiles |
| quanteda | Quantitative Analysis of Textual Data |
| quanteda.textmodels | Scaling Models and Classifiers for Textual Data |
| quanteda.textplots | Plots for the Quantitative Analysis of Textual Data |
| quanteda.textstats | Textual Statistics for the Quantitative Analysis of Textual Data |
| quantification | Quantification of Qualitative Survey Data |
| quantileDA | Quantile Classifier |
| QuantileGH | Quantile Least Mahalanobis Distance Estimator for Tukey g-&-h Mixture |
| QuantileGradeR | Quantile-Adjusted Restaurant Grading |
| QuantileNPCI | Nonparametric Confidence Intervals for Quantiles |
| quantilogram | Cross-Quantilogram |
| quantities | Quantity Calculus for R Vectors |
| quantkriging | Quantile Kriging for Stochastic Simulations with Replication |
| quantmod | Quantitative Financial Modelling Framework |
| QuantNorm | Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection |
| quantoptr | Algorithms for Quantile- And Mean-Optimal Treatment Regimes |
| QuantPsyc | Quantitative Psychology Tools |
| quantreg | Quantile Regression |
| quantreg.nonpar | Nonparametric Series Quantile Regression |
| quantregForest | Quantile Regression Forests |
| quantregGrowth | Growth Charts via Smooth Regression Quantiles with Automatic Smoothness Estimation and Additive Terms |
| quantregRanger | Quantile Regression Forests for 'ranger' |
| quantspec | Quantile-Based Spectral Analysis of Time Series |
| QuantumOps | Performs Common Linear Algebra Operations Used in Quantum Computing and Implements Quantum Algorithms |
| quarks | Simple Methods for Calculating and Backtesting Value at Risk and Expected Shortfall |
| quarrint | Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks |
| Quartet | Comparison of Phylogenetic Trees Using Quartet and Split Measures |
| quarto | R Interface to 'Quarto' Markdown Publishing System |
| QuClu | Quantile-Based Clustering Algorithms |
| queryparser | Translate 'SQL' Queries into 'R' Expressions |
| quest | Prepare Questionnaire Data for Analysis |
| questionr | Functions to Make Surveys Processing Easier |
| QuESTr | Constructing Quantitative Environment Sensor using Transcriptomes |
| queuecomputer | Computationally Efficient Queue Simulation |
| queueing | Analysis of Queueing Networks and Models |
| quhomology | Calculation of Homology of Quandles, Racks, Biquandles and Biracks |
| quickblock | Quick Threshold Blocking |
| quickcheck | Property Based Testing |
| quickerstats | An 'R' Client for the 'USDA NASS Quick Stats API' |
| quickmapr | Quickly Map and Explore Spatial Data |
| quickmatch | Quick Generalized Full Matching |
| quickNmix | Asymptotic N-Mixture Model Fitting |
| quickPlot | A System of Plotting Optimized for Speed and Modularity |
| quickpsy | Fits Psychometric Functions for Multiple Groups |
| quickReg | Build Regression Models Quickly and Display the Results Using 'ggplot2' |
| quickregression | Quick Linear Regression |
| quid | Bayesian Mixed Models for Qualitative Individual Differences |
| quiddich | QUick IDentification of DIagnostic CHaracters |
| quietR | Simplify Output Verbosity |
| quiltr | Qualtrics for Labelling Text using R |
| quincunx | REST API Client for the 'PGS' Catalog |
| quint | Qualitative Interaction Trees |
| quokar | Quantile Regression Outlier Diagnostics with K Left Out Analysis |
| quotedargs | A Way of Writing Functions that Quote their Arguments |
| quRan | Complete Text of the Qur'an |
| qut | Quantile Universal Threshold |
| qvcalc | Quasi Variances for Factor Effects in Statistical Models |
| QWDAP | Quantum Walk-Based Data Analysis and Prediction |
| qwraps2 | Quick Wraps 2 |
| QZ | Generalized Eigenvalues and QZ Decomposition |
| r.blip | Bayesian Network Learning Improved Project |
| R.cache | Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations |
| R.devices | Unified Handling of Graphics Devices |
| R.filesets | Easy Handling of and Access to Files Organized in Structured Directories |
| R.huge | Methods for Accessing Huge Amounts of Data [deprecated] |
| r.jive | Perform JIVE Decomposition for Multi-Source Data |
| R.matlab | Read and Write MAT Files and Call MATLAB from Within R |
| R.methodsS3 | S3 Methods Simplified |
| R.oo | R Object-Oriented Programming with or without References |
| r.proxy | Set Proxy in R Console |
| R.rsp | Dynamic Generation of Scientific Reports |
| R.SamBada | Processing Pipeline for 'SamBada' from Pre- To Post-Processing |
| R.temis | Integrated Text Mining Solution |
| R.utils | Various Programming Utilities |
| r02pro | R Programming: Zero to Pro |
| R1magic | Compressive Sampling: Sparse Signal Recovery Utilities |
| R2Addhaz | R2 Measure of Explained Variation under the Additive Hazards Model |
| R2admb | 'ADMB' to R Interface Functions |
| R2BayesX | Estimate Structured Additive Regression Models with 'BayesX' |
| R2BEAT | Multistage Sampling Allocation and Sample Selection |
| r2d2 | Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution |
| r2d3 | Interface to 'D3' Visualizations |
| r2dictionary | A Mini-Dictionary for 'R' and 'Markdown' Writing |
| r2dii.analysis | Measure Climate Scenario Alignment of Corporate Loans |
| r2dii.data | Datasets to Measure the Alignment of Corporate Loan Books with Climate Goals |
| r2dii.match | Tools to Match Corporate Lending Portfolios with Climate Data |
| r2dii.plot | Visualize the Climate Scenario Alignment of a Financial Portfolio |
| R2DT | Translation of Base R-Like Functions for 'data.table' Objects |
| r2glmm | Computes R Squared for Mixed (Multilevel) Models |
| R2HTML | HTML Exportation for R Objects |
| R2jags | Using R to Run 'JAGS' |
| r2mlm | R-Squared Measures for Multilevel Models |
| R2MLwiN | Running 'MLwiN' from Within R |
| R2OpenBUGS | Running OpenBUGS from R |
| r2pmml | Convert R Models to PMML |
| R2PPT | Simple R Interface to Microsoft PowerPoint using RDCOMClient |
| r2pptx | Object Oriented R -> PowerPoint |
| r2r | R-Object to R-Object Hash Maps |
| r2redux | R2 Statistic |
| r2rtf | Easily Create Production-Ready Rich Text Format (RTF) Table and Figure |
| r2shortcode | Shorten Package Function Names |
| r2spss | Format R Output to Look Like SPSS |
| r2sundials | Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem |
| R2SWF | Convert R Graphics to Flash Animations |
| r2symbols | Symbols for 'Markdown' and 'Shiny' Application |
| R2ucare | Goodness-of-Fit Tests for Capture-Recapture Models |
| R2wd | Write MS-Word documents from R |
| R2WinBUGS | Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS' |
| r3dmol | Create Interactive 3D Visualizations of Molecular Data |
| r3js | 'WebGL'-Based 3D Plotting using the 'three.js' Library |
| r3PG | Simulating Forest Growth using the 3-PG Model |
| R3port | Report Functions to Create HTML and PDF Files |
| R4CouchDB | A R Convenience Layer for CouchDB 2.0 |
| r4googleads | 'Google Ads API' Interface |
| r4lineups | Statistical Inference on Lineup Fairness |
| r4ss | R Code for Stock Synthesis |
| r5r | Rapid Realistic Routing with 'R5' |
| R6 | Encapsulated Classes with Reference Semantics |
| R62S3 | Automatic Method Generation from R6 |
| R6causal | R6 Class for Structural Causal Models |
| R6DS | R6 Reference Class Based Data Structures |
| r6extended | Extension for 'R6' Base Class |
| r6methods | Make Methods for R6 Classes |
| R6P | Design Patterns in R |
| ra4bayesmeta | Reference Analysis for Bayesian Meta-Analysis |
| rabhit | Inference Tool for Antibody Haplotype |
| rabi | Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies |
| RABR | Simulations for Response Adaptive Block Randomization Design |
| RAC | R Package for Aqua Culture |
| racademyocean | Client for 'AcademyOcean API' |
| RaceID | Identification of Cell Types and Inference of Lineage Trees from Single-Cell RNA-Seq Data |
| raceland | Pattern-Based Zoneless Method for Analysis and Visualization of Racial Topography |
| racir | Rapid A/Ci Response (RACiR) Data Analysis |
| ractivecampaign | Loading Data from 'ActiveCampaign API v3' |
| rADA | Statistical Analysis and Cut-Point Determination of Immunoassays |
| RADanalysis | Normalization and Study of Rank Abundance Distributions |
| radar | Fundamental Formulas for Radar |
| radarBoxplot | Implementation of the Radar-Boxplot |
| radarchart | Radar Chart from 'Chart.js' |
| RadData | Nuclear Decay Data for Dosimetric Calculations - ICRP 107 |
| RadialVisGadgets | Interactive Gadgets for Radial Visualization Approaches |
| radiant | Business Analytics using R and Shiny |
| radiant.basics | Basics Menu for Radiant: Business Analytics using R and Shiny |
| radiant.data | Data Menu for Radiant: Business Analytics using R and Shiny |
| radiant.design | Design Menu for Radiant: Business Analytics using R and Shiny |
| radiant.model | Model Menu for Radiant: Business Analytics using R and Shiny |
| radiant.multivariate | Multivariate Menu for Radiant: Business Analytics using R and Shiny |
| RadioSonde | Tools for Plotting Skew-T Diagrams and Wind Profiles |
| radir | Inverse-Regression Estimation of Radioactive Doses |
| radlibs | Build Your Own Madlibs! |
| RadOnc | Analytical Tools for Radiation Oncology |
| radous | Query Random User Data from the Random User Generator API |
| radsafer | Radiation Safety |
| RADstackshelpR | Optimize the De Novo Stacks Pipeline via R |
| Radviz | Project Multidimensional Data in 2D Space |
| RAdwords | Loading Google Adwords Data into R |
| RAEN | Random Approximate Elastic Net (RAEN) Variable Selection Method |
| rafalib | Convenience Functions for Routine Data Exploration |
| Rage | Life History Metrics from Matrix Population Models |
| ragg | Graphic Devices Based on AGG |
| RagGrid | A Wrapper of the 'JavaScript' Library 'agGrid' |
| rags2ridges | Ridge Estimation of Precision Matrices from High-Dimensional Data |
| ragt2ridges | Ridge Estimation of Vector Auto-Regressive (VAR) Processes |
| ragtop | Pricing Equity Derivatives with Extensions of Black-Scholes |
| rai | Revisiting-Alpha-Investing for Polynomial Regression |
| rainbow | Bagplots, Boxplots and Rainbow Plots for Functional Data |
| RAINBOWR | Genome-Wide Association Study with SNP-Set Methods |
| raincin | Ranking with Incomplete Information |
| rainette | The Reinert Method for Textual Data Clustering |
| RainfallErosivityFactor | The Rainfall-Runoff Erosivity Factor |
| rainfarmr | Stochastic Precipitation Downscaling with the RainFARM Method |
| rairtable | Efficient Wrapper for the 'Airtable' API |
| RaJIVE | Robust Angle Based Joint and Individual Variation Explained |
| rakeR | Easy Spatial Microsimulation (Raking) in R |
| ralger | Easy Web Scraping |
| RALSA | R Analyzer for Large-Scale Assessments |
| RamanMP | Analysis and Identification of Raman Spectra of Microplastics |
| Ramble | Parser Combinator for R |
| rAmCharts | JavaScript Charts Tool |
| rAmCharts4 | Interface to the JavaScript Library 'amCharts 4' |
| ramchoice | Revealed Preference and Attention Analysis in Random Limited Attention Models |
| RAMClustR | Mass Spectrometry Metabolomics Feature Clustering and Interpretation |
| ramcmc | Robust Adaptive Metropolis Algorithm |
| rameritrade | 'TD Ameritrade' API Interface for R |
| ramify | Additional Matrix Functionality |
| ramlegacy | Download and Read RAM Legacy Stock Assessment Database |
| RAMP | Regularized Generalized Linear Models with Interaction Effects |
| RAMpath | Structural Equation Modeling Using the Reticular Action Model (RAM) Notation |
| ramps | Bayesian Geostatistical Modeling with RAMPS |
| RaMS | R Access to Mass-Spec Data |
| ramsvm | Reinforced Angle-Based Multicategory Support Vector Machines |
| randChecks | Covariate Balance Checks: Randomization Tests and Graphical Diagnostics |
| randcorr | Generate a Random p x p Correlation Matrix |
| randgeo | Generate Random 'WKT' or 'GeoJSON' |
| RandMeta | Efficient Numerical Algorithm for Exact Inference in Meta Analysis |
| randNames | Package Provides Access to Fake User Data |
| rando | Context Aware Random Numbers |
| random | True Random Numbers using RANDOM.ORG |
| random.polychor.pa | A Parallel Analysis with Polychoric Correlation Matrices |
| randomcoloR | Generate Attractive Random Colors |
| RandomFieldsUtils | Utilities for the Simulation and Analysis of Random Fields and Genetic Data |
| randomForest | Breiman and Cutler's Random Forests for Classification and Regression |
| randomForestExplainer | Explaining and Visualizing Random Forests in Terms of Variable Importance |
| RandomForestsGLS | Random Forests for Dependent Data |
| randomForestSRC | Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC) |
| randomGLM | Random General Linear Model Prediction |
| randomizationInference | Flexible Randomization-Based Inference |
| randomizeBE | Create a Random List for Crossover Studies |
| randomizeR | Randomization for Clinical Trials |
| randomizr | Easy-to-Use Tools for Common Forms of Random Assignment and Sampling |
| randomLCA | Random Effects Latent Class Analysis |
| randomNames | Generate Random Given and Surnames |
| randomUniformForest | Random Uniform Forests for Classification, Regression and Unsupervised Learning |
| Randomuseragent | Filtering and Randomly Sampling Real User-Agent Strings |
| RandPro | Random Projection with Classification |
| randquotes | Get Random Quotes from Quotes on Design API |
| randtests | Testing Randomness in R |
| randtoolbox | Toolbox for Pseudo and Quasi Random Number Generation and Random Generator Tests |
| RandVar | Implementation of Random Variables |
| rangeBuilder | Occurrence Filtering, Geographic and Taxonomic Standardization and Generation of Species Range Polygons |
| rangemap | Simple Tools for Defining Species Ranges |
| rangeMapper | A Platform for the Study of Macro-Ecology of Life History Traits |
| rangeModelMetadata | Provides Templates for Metadata Files Associated with Species Range Models |
| ranger | A Fast Implementation of Random Forests |
| RanglaPunjab | Displays Palette of 5 Colors |
| RankAggreg | Weighted Rank Aggregation |
| RankAggregator | Aggregation of (Partial) Ordinal Rankings |
| RankAggSIgFUR | Polynomially Bounded Rank Aggregation under Kemeny's Axiomatic Approach |
| Rankcluster | Model-Based Clustering for Multivariate Partial Ranking Data |
| rankdifferencetest | Kornbrot's Rank Difference Test |
| rankdist | Distance Based Ranking Models |
| rankFD | Rank-Based Tests for General Factorial Designs |
| rankhazard | Rank-Hazard Plots |
| RankingProject | The Ranking Project: Visualizations for Comparing Populations |
| rankinPlot | Convenient Plotting for the Modified Rankin Scale and Other Ordinal Outcome Data |
| rankrate | Statistical Tools for Preference Learning with Rankings and Ratings |
| RankResponse | Ranking Responses in a Single Response Question or a Multiple Response Question |
| rankUncertainty | Methods for Working with Uncertainty in Rankings |
| ranlip | Generation of Random Vectors with User-Defined Density |
| RANN | Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric |
| rapbase | Base Functions and Resources for Rapporteket |
| rapiclient | Dynamic OpenAPI/Swagger Client |
| RApiDatetime | R API Datetime |
| rapidjsonr | 'Rapidjson' C++ Header Files |
| rapidoc | Generates 'RapiDoc' Documentation from an 'OpenAPI' Specification |
| RapidoPGS | A Fast and Light Package to Compute Polygenic Risk Scores |
| RapidPolygonLookup | POLYGON LOOKUP USING KD TREES |
| rapidraker | Rapid Automatic Keyword Extraction (RAKE) Algorithm |
| rapidxmlr | 'Rapidxml' C++ Header Files |
| RApiSerialize | R API Serialization |
| RAppArmor | Bindings to AppArmor and Security Related Linux Tools |
| rappdirs | Application Directories: Determine Where to Save Data, Caches, and Logs |
| rapport | A Report Templating System |
| rapportools | Miscellaneous (Stats) Helper Functions with Sane Defaults for Reporting |
| rappsflyer | Work with AppsFlyer API |
| RaProR | Calculate Sketches using Random Projections to Reduce Large Data Sets |
| rapsimng | APSIM Next Generation |
| RAPTOR | Row and Position Tracheid Organizer |
| raptr | Representative and Adequate Prioritization Toolkit in R |
| RAQSAPI | A Simple Interface to the US EPA Air Quality System Data Mart API |
| Raquifer | Estimate the Water Influx into Hydrocarbon Reservoirs |
| rare | Linear Model with Tree-Based Lasso Regularization for Rare Features |
| RareComb | Combinatorial and Statistical Analyses of Rare Events |
| Rarefy | Rarefaction Methods |
| rareNMtests | Ecological and Biogeographical Null Model Tests for Comparing Rarefaction Curves |
| Rarity | Calculation of Rarity Indices for Species and Assemblages of Species |
| rarms | Access Data from the USDA ARMS Data API |
| rARPACK | Solvers for Large Scale Eigenvalue and SVD Problems |
| RaschSampler | Rasch Sampler |
| rasciidoc | Create Reports Using R and 'asciidoc' |
| rasclass | Supervised Raster Image Classification |
| RaSEn | Random Subspace Ensemble Classification and Variable Screening |
| rassta | Raster-Based Spatial Stratification Algorithms |
| raster | Geographic Data Analysis and Modeling |
| rasterbc | Access Forest Ecology Layers for British Columbia in 2001-2018 |
| rasterdiv | Diversity Indices for Numerical Matrices |
| rasterDT | Fast Raster Summary and Manipulation |
| rasterImage | An Improved Wrapper of image() |
| rasterize | Rasterize Graphical Output |
| rasterKernelEstimates | Kernel Based Estimates on in-Memory Raster Images |
| rasterList | A Raster Where Cells are Generic Objects |
| rasterly | Easily and Rapidly Generate Raster Image Data with Support for 'Plotly.js' |
| rasterpdf | Plot Raster Graphics in PDF Files |
| rasterpic | Create a Spatial Raster from Plain Images |
| rasterVis | Visualization Methods for Raster Data |
| RAT | Research Assessment Tools |
| Rata | Automated Test Assembly |
| ratdat | Portal Project Teaching Database |
| ratelimitr | Rate Limiting for R |
| ratematrix | Bayesian Estimation of the Evolutionary Rate Matrix |
| rater | Statistical Models of Repeated Categorical Rating Data |
| rateratio.test | Exact Rate Ratio Test |
| raters | A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables |
| ratesci | Confidence Intervals for Comparisons of Binomial or Poisson Rates |
| RATest | Randomization Tests |
| RAthena | Connect to 'AWS Athena' using 'Boto3' ('DBI' Interface) |
| RatingScaleReduction | Rating Scale Reduction Procedure |
| RationalExp | Rationalizing Rational Expectations. Tests and Deviations |
| rationalfun | Manipulation of Rational Functions |
| ratios | Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants |
| rATTAINS | Access EPA 'ATTAINS' Data |
| rattle | Graphical User Interface for Data Science in R |
| Ravages | Rare Variant Analysis and Genetic Simulations |
| ravedash | Dashboard System for Reproducible Visualization of 'iEEG' |
| raveio | File-System Toolbox for RAVE Project |
| ravelRy | An Interface to the 'Ravelry' API |
| raven.rdf | An R Interface for Raven DataFrames (Beta0) |
| RavenR | Raven Hydrological Modelling Framework R Support and Analysis |
| rAverage | Parameter Estimation for the Averaging Model of Information Integration Theory |
| ravetools | Signal Processing Toolbox for Analyzing 'Electrophysiology' Data |
| raw | R Actuarial Workshops |
| RawHummus | Raw Data Quality Control Tool for LC-MS System |
| rawKS | Easily Get True-Positive Rate and False-Positive Rate and KS Statistic |
| raws.profile | Managing Profiles on Amazon Web Service |
| rayimage | Image Processing for Simulated Cameras |
| raymolecule | Parse and Render Molecular Structures in 3D |
| rayrender | Build and Raytrace 3D Scenes |
| rayshader | Create Maps and Visualize Data in 2D and 3D |
| raytracing | Rossby Wave Ray Tracing |
| rayvertex | 3D Software Rasterizer |
| rb3 | Download and Parse Public Data Released by B3 Exchange |
| rbace | 'Bielefeld' Academic Search Engine ('BASE') Client |
| rbacon | Age-Depth Modelling using Bayesian Statistics |
| rbart | Bayesian Trees for Conditional Mean and Variance |
| RBaseX | 'BaseX' Client |
| rBayesianOptimization | Bayesian Optimization of Hyperparameters |
| rbcb | R Interface to Brazilian Central Bank Web Services |
| rbch | Extraction and Analysis of Data from the Bitcoin Cash (BCH) Blockchain |
| rBDAT | Implementation of BDAT Tree Taper Fortran Functions |
| Rbeast | Bayesian Change-Point Detection and Time Series Decomposition |
| rbedrock | Analysis and Manipulation of Data from Minecraft Bedrock Edition |
| rbenchmark | Benchmarking routine for R |
| Rbent | Robust Bent Line Regression |
| rbenvo | Built Environment Objects |
| RBesT | R Bayesian Evidence Synthesis Tools |
| rBeta2009 | The Beta Random Number and Dirichlet Random Vector Generating Functions |
| RBF | Robust Backfitting |
| rbgm | Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model |
| Rbgs | Reading and Background Subtraction in Videos |
| rbhl | Interface to the 'Biodiversity' 'Heritage' Library |
| rbi | Interface to 'LibBi' |
| rbi.helpers | 'RBi' Helper Functions |
| rBiasCorrection | Correct Bias in DNA Methylation Analyses |
| rbibutils | Read 'Bibtex' Files and Convert Between Bibliography Formats |
| rbin | Tools for Binning Data |
| rbioacc | Inference and Prediction of ToxicoKinetic (TK) Models |
| rbioapi | User-Friendly R Interface to Biologic Web Services' API |
| rbiom | Read/Write, Transform, and Summarize 'BIOM' Data |
| rbiouml | Interact with BioUML Server |
| rbison | Interface to the 'USGS' 'BISON' API |
| rbit | Binary Indexed Tree |
| RblDataLicense | R Interface to 'Bloomberg Data License' |
| Rblpapi | R Interface to 'Bloomberg' |
| rblt | Bio-Logging Toolbox |
| rBMF | Boolean Matrix Factorization |
| rbmi | Reference Based Multiple Imputation |
| rbmn | Handling Linear Gaussian Bayesian Networks |
| RBMRB | BMRB Data Access and Visualization |
| RBNZ | Download Data from the Reserve Bank of New Zealand Website |
| rbokeh | R Interface for Bokeh |
| rbooster | AdaBoost Framework for Any Classifier |
| Rborist | Extensible, Parallelizable Implementation of the Random Forest Algorithm |
| rbounds | Perform Rosenbaum Bounds Sensitivity Tests for Matched and Unmatched Data |
| RBPcurve | The Residual-Based Predictiveness Curve |
| rbridge | Restricted Bridge Estimation |
| rbscCI | Blyth-Still-Casella Confidence Interval |
| rbtc | Bitcoin API |
| RBtest | Regression-Based Approach for Testing the Type of Missing Data |
| rbtt | Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data |
| rbw | Residual Balancing Weights for Marginal Structural Models |
| RCA | Relational Class Analysis |
| rcage | Regionalization of Multiscale Spatial Processes |
| rcaiman | An R Package for CAnopy IMage ANalysis |
| RCAL | Regularized Calibrated Estimation |
| RCALI | Calculation of the Integrated Flow of Particles Between Polygons |
| Rcan | Cancer Registry Data Analysis and Visualisation |
| rcanvec | Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada |
| Rcapture | Loglinear Models for Capture-Recapture Experiments |
| RCarb | Dose Rate Modelling of Carbonate-Rich Samples |
| rcarbon | Calibration and Analysis of Radiocarbon Dates |
| rcartocolor | 'CARTOColors' Palettes |
| rCAT | Conservation Assessment Tools |
| Rcatch22 | Calculation of 22 CAnonical Time-Series CHaracteristics |
| rCBA | CBA Classifier |
| rcbalance | Large, Sparse Optimal Matching with Refined Covariate Balance |
| rcbayes | Estimate Rogers-Castro Migration Age Schedules with Bayesian Models |
| RCBR | Random Coefficient Binary Response Estimation |
| rcbsubset | Optimal Subset Matching with Refined Covariate Balance |
| rcc | Parametric Bootstrapping to Control Rank Conditional Coverage |
| rccola | Safely Manage API Keys and Load Data from a REDCap or Other Source |
| RCCPCA | "Retained Component Criterion for Principal Component Analysis" |
| rcdd | Computational Geometry |
| rcDEA | Robust and Conditional Data Envelopment Analysis (DEA) |
| rcdk | Interface to the 'CDK' Libraries |
| rcdklibs | The CDK Libraries Packaged for R |
| RCDT | Fast 2D Constrained Delaunay Triangulation |
| RCEIM | R Cross Entropy Inspired Method for Optimization |
| RcellData | Example Dataset for 'Rcell' Package |
| Rcereal | C++11 Header Files for 'cereal' |
| RcextTools | Analytical Procedures in Support of Brazilian Public Sector External Auditing |
| RCGLS | Download and Open Data Provided by the Copernicus Global Land Service |
| Rcgmin | Conjugate Gradient Minimization of Nonlinear Functions with Box Constraints |
| rchallenge | A Simple Data Science Challenge System |
| rcheology | Data on Base Packages for Current and Previous Versions of R |
| rchess | Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection |
| RChest | Locating Distributional Changes in Highly Dependent Time Series |
| rchie | A Parser for 'ArchieML' |
| RchivalTag | Analyzing Archival Tagging Data |
| Rchoice | Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters |
| rChoiceDialogs | 'rChoiceDialogs' Collection |
| RChronoModel | Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal |
| RCircos | Circos 2D Track Plot |
| rcites | R Interface to the Species+ Database |
| rcitoid | Client for 'Citoid' |
| RCLabels | Manipulate Matrix Row and Column Labels with Ease |
| RClickhouse | 'Yandex Clickhouse' Interface for R with Basic 'dplyr' Support |
| RClimacell | R Wrapper for the 'Climacell' API |
| rclipboard | Shiny/R Wrapper for 'clipboard.js' |
| rCMA | R-to-Java Interface for 'CMA-ES' |
| rcmdcheck | Run 'R CMD check' from 'R' and Capture Results |
| Rcmdr | R Commander |
| RcmdrMisc | R Commander Miscellaneous Functions |
| RcmdrPlugin.aRnova | R Commander Plug-in for Repeated-Measures ANOVA |
| RcmdrPlugin.BiclustGUI | 'Rcmdr' Plug-in GUI for Biclustering |
| RcmdrPlugin.BWS1 | R Commander Plug-in for Case 1 (Object Case) Best-Worst Scaling |
| RcmdrPlugin.BWS2 | R Commander Plug-in for Case 2 Best-Worst Scaling |
| RcmdrPlugin.coin | Rcmdr Coin Plug-in |
| RcmdrPlugin.DCCV | R Commander Plug-in for Dichotomous Choice Contingent Valuation |
| RcmdrPlugin.DCE | R Commander Plug-in for Discrete Choice Experiments |
| RcmdrPlugin.depthTools | R Commander Depth Tools Plug-in |
| RcmdrPlugin.DoE | R Commander Plugin for (Industrial) Design of Experiments |
| RcmdrPlugin.EBM | Rcmdr Evidence Based Medicine Plug-in Package |
| RcmdrPlugin.EcoVirtual | Rcmdr EcoVirtual Plugin |
| RcmdrPlugin.Export | Export R Output to LaTeX or HTML |
| RcmdrPlugin.EZR | R Commander Plug-in for the EZR (Easy R) Package |
| RcmdrPlugin.FactoMineR | Graphical User Interface for FactoMineR |
| RcmdrPlugin.GWRM | R Commander Plug-in for Fitting Generalized Waring Regression Models |
| RcmdrPlugin.HH | Rcmdr Support for the HH Package |
| RcmdrPlugin.KMggplot2 | R Commander Plug-in for Data Visualization with 'ggplot2' |
| RcmdrPlugin.MA | Graphical User Interface for Conducting Meta-Analyses in R |
| RcmdrPlugin.MPAStats | R Commander Plug-in for MPA Statistics |
| RcmdrPlugin.NMBU | R Commander Plug-in for University Level Applied Statistics |
| RcmdrPlugin.orloca | A GUI for Planar Location Problems |
| RcmdrPlugin.PcaRobust | R Commander Plug-in for Robust Principal Component Analysis |
| RcmdrPlugin.RiskDemo | R Commander Plug-in for Risk Demonstration |
| RcmdrPlugin.RMTCJags | R MTC Jags 'Rcmdr' Plugin |
| RcmdrPlugin.ROC | Rcmdr Receiver Operator Characteristic Plug-in Package |
| RcmdrPlugin.SCDA | Rcmdr Plugin for Designing and Analyzing Single-Case Experiments |
| RcmdrPlugin.sos | Efficiently search the R help pages |
| RcmdrPlugin.survival | R Commander Plug-in for the 'survival' Package |
| RcmdrPlugin.sutteForecastR | 'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR' |
| RcmdrPlugin.TeachingDemos | Rcmdr Teaching Demos Plug-in |
| RcmdrPlugin.TeachStat | R Commander Plugin for Teaching Statistical Methods |
| RcmdrPlugin.temis | Graphical Integrated Text Mining Solution |
| RcmdrPlugin.UCA | UCA Rcmdr Plug-in |
| RcmdrPlugin.WorldFlora | R Commander Plug-in for the 'WorldFlora' Package |
| RCMinification | Random Coefficient Minification Time Series Models |
| rCNV | Detect Copy Number Variants from SNPs Data |
| rco | The R Code Optimizer |
| RColetum | Access your Coletum's Data from API |
| RColorBrewer | ColorBrewer Palettes |
| rcolors | 270 'NCL' Color Tables in R Language |
| Rcompadre | Utilities for using the 'COM(P)ADRE' Matrix Model Database |
| rcompanion | Functions to Support Extension Education Program Evaluation |
| rcompendium | Create a Package or Research Compendium Structure |
| rconfig | Manage R Configuration at the Command Line |
| RConics | Computations on Conics |
| rcoreoa | Client for the CORE API |
| rcorpora | A Collection of Small Text Corpora of Interesting Data |
| RCPA3 | Data and Functions for R Companion to Political Analysis 3rd Ed |
| Rcplex | R Interface to CPLEX |
| RCPmod | Regions of Common Profiles Modelling with Mixtures-of-Experts |
| Rcpp | Seamless R and C++ Integration |
| Rcpp11 | R and C++11 |
| RcppAlgos | High Performance Tools for Combinatorics and Computational Mathematics |
| RcppAnnoy | 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors |
| RcppAPT | 'Rcpp' Interface to the APT Package Manager |
| RcppArmadillo | 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library |
| RcppBDT | 'Rcpp' Bindings for the Boost Date_Time Library |
| RcppBigIntAlgos | Factor Big Integers with the Parallel Quadratic Sieve |
| RcppCCTZ | 'Rcpp' Bindings for the 'CCTZ' Library |
| RcppCensSpatial | Spatial Estimation and Prediction for Censored/Missing Responses |
| RcppCGAL | Rcpp Integration for CGAL |
| RcppClassic | Deprecated 'classic' 'Rcpp' 'API' |
| RcppClassicExamples | Examples using 'RcppClassic' to Interface R and C++ |
| RcppClock | Seamless 'Rcpp' Benchmarking |
| RcppCNPy | Read-Write Support for 'NumPy' Files via 'Rcpp' |
| RcppColors | 'C++' Header Files for Color Conversion and Color Mappings |
| RcppCWB | 'Rcpp' Bindings for the 'Corpus Workbench' ('CWB') |
| RcppDate | 'date' C++ Header Library for Date and Time Functionality |
| RcppDE | Global Optimization by Differential Evolution in C++ |
| RcppDist | 'Rcpp' Integration of Additional Probability Distributions |
| RcppDL | Deep Learning Methods via Rcpp |
| RcppDynProg | 'Rcpp' Dynamic Programming |
| RcppEigen | 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library |
| RcppEigenAD | Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce First and Second Order Partial Derivatives |
| RcppEnsmallen | Header-Only C++ Mathematical Optimization Library for 'Armadillo' |
| RcppExamples | Examples using 'Rcpp' to Interface R and C++ |
| RcppFarmHash | Interface to the Google 'FarmHash' Family of Hash Functions |
| RcppFastFloat | 'Rcpp' Bindings for the 'fast_float' Header-Only Library for Number Parsing |
| RcppGetconf | 'Rcpp' Interface for Querying System Configuration Variables |
| RcppGreedySetCover | Greedy Set Cover |
| RcppGSL | 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices |
| RcppHMM | Rcpp Hidden Markov Model |
| RcppHNSW | 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors |
| RcppHungarian | Solves Minimum Cost Bipartite Matching Problems |
| RcppMeCab | 'rcpp' Wrapper for 'mecab' Library |
| RcppML | Rcpp Machine Learning Library |
| RcppMsgPack | 'MsgPack' C++ Header Files and Interface Functions for R |
| RcppNLoptExample | 'Rcpp' Package Illustrating Header-Only Access to 'NLopt' |
| RcppNumerical | 'Rcpp' Integration for Numerical Computing Libraries |
| RcppParallel | Parallel Programming Tools for 'Rcpp' |
| RcppProgress | An Interruptible Progress Bar with OpenMP Support for C++ in R Packages |
| RcppQuantuccia | R Bindings to the Calendaring Functionality of 'QuantLib' |
| RcppRedis | 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library |
| RcppRoll | Efficient Rolling / Windowed Operations |
| RcppSimdJson | 'Rcpp' Bindings for the 'simdjson' Header-Only Library for 'JSON' Parsing |
| RcppSMC | Rcpp Bindings for Sequential Monte Carlo |
| RcppSpdlog | 'spdlog' C++ Header Library for Logging |
| RcppStreams | 'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing |
| RcppThread | R-Friendly Threading in C++ |
| RcppTN | Rcpp-Based Truncated Normal Distribution RNG and Family |
| RcppTOML | 'Rcpp' Bindings to Parser for Tom's Obvious Markup Language |
| RcppUUID | Generating Universally Unique Identificators |
| RcppXPtrUtils | XPtr Add-Ons for 'Rcpp' |
| RcppXsimd | Xsimd C++ Header-Only Library Files |
| RcppXts | Interface the 'xts' API via 'Rcpp' |
| RcppZiggurat | 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations |
| Rcrawler | Web Crawler and Scraper |
| RCreliability | Correct Bias in Estimated Regression Coefficients |
| rcrimeanalysis | An Implementation of Crime Analysis Methods |
| RCriteo | Loading Criteo Data into R |
| Rcriticor | Pierre-Goldwin Correlogram |
| rCRM | Regularized Continual Reassessment Method |
| RCRnorm | An Integrated Regression Model for Normalizing 'NanoString nCounter' Data |
| rcrossref | Client for Various 'CrossRef' 'APIs' |
| rcrypt | Symmetric File Encryption Using GPG |
| Rcsdp | R Interface to the CSDP Semidefinite Programming Library |
| RCSF | Airborne LiDAR Filtering Method Based on Cloth Simulation |
| Rcssplot | Styling of Graphics using Cascading Style Sheets |
| RCT | Assign Treatments, Power Calculations, Balances, Impact Evaluation of Experiments |
| rct3 | Predict Fish Year-Class Strength from Survey Data |
| RCTS | Clustering Time Series While Resisting Outliers |
| rcube | Simulations and Visualizations of Rubik's Cube (with Mods) |
| RCurl | General Network (HTTP/FTP/...) Client Interface for R |
| Rcurvep | Concentration-Response Data Analysis using Curvep |
| RCytoGPS | Using Cytogenetics Data in R |
| RCzechia | Spatial Objects of the Czech Republic |
| Rd2md | Markdown Reference Manuals |
| Rd2roxygen | Convert Rd to 'Roxygen' Documentation |
| rD3plot | Interactive Networks, Timelines, Barplots, Galleries with 'D3.js' |
| rdacca.hp | Hierarchical and Variation Partitioning for Canonical Analysis |
| rdaisi | R Client for the Daisi Microservice Platform |
| RDataCanvas | Basic Runtime Support for Datacanvas.io |
| rdatacite | Client for the 'DataCite' API |
| rDataPipeline | Functions to Interact with the 'FAIR Data Pipeline' |
| rdataretriever | R Interface to the Data Retriever |
| rdbnomics | Download DBnomics Data |
| Rdca | DCA Tools for Decline Rate Analysis and EUR Forecast |
| rdd | Regression Discontinuity Estimation |
| rddapp | Regression Discontinuity Design Application |
| rdddr | Companion Datasets and Functions for Blair, Coppock, and Humphreys (2022) "Research Design: Declare, Diagnose, Redesign" |
| rddensity | Manipulation Testing Based on Density Discontinuity |
| rddi | R Interface to DDI Codebook 2.5 |
| rddtools | Toolbox for Regression Discontinuity Design ('RDD') |
| rde | Reproducible Data Embedding |
| rDEA | Robust Data Envelopment Analysis (DEA) for R |
| rdecision | Decision Analytic Modelling in Health Economics |
| rDecode | Descent-Based Calibrated Optimal Direct Estimation |
| rdflib | Tools to Manipulate and Query Semantic Data |
| rdfp | An Implementation of the 'DoubleClick for Publishers' API |
| rdhs | API Client and Dataset Management for the Demographic and Health Survey (DHS) Data |
| rdi | Repertoire Dissimilarity Index |
| Rdiagnosislist | Manipulate SNOMED CT Diagnosis Lists |
| rdian | Client Library for The Guardian |
| Rdice | A Collection of Functions to Experiment Dice Rolls |
| RDieHarder | R Interface to the 'DieHarder' RNG Test Suite |
| Rdimtools | Dimension Reduction and Estimation Methods |
| rdist | Calculate Pairwise Distances |
| Rdistance | Distance-Sampling Analyses for Density and Abundance Estimation |
| rdiversity | Measurement and Partitioning of Similarity-Sensitive Biodiversity |
| rdlocrand | Local Randomization Methods for RD Designs |
| RDML | Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files |
| rdmulti | Analysis of RD Designs with Multiple Cutoffs or Scores |
| rDNAse | Generating Various Numerical Representation Schemes of DNA Sequences |
| rdnb | R Interface to the 'Deutsche Nationalbibliothek (German National Library) API' |
| RDnp | Robust Test for Complete Independence in High-Dimensions |
| rdoc | Colourised R Documentation |
| RDocumentation | Integrate R with 'RDocumentation' |
| rdomains | Get the Category of Content Hosted by a Domain |
| RDota2 | An R Steam API Client for Valve's Dota2 |
| rdoxygen | Create Doxygen Documentation for Source Code |
| RDP | The Ramer-Douglas-Peucker Algorithm |
| Rdpack | Update and Manipulate Rd Documentation Objects |
| rdpower | Power Calculations for RD Designs |
| rDppDiversity | Subset Searching Algorithm Using DPP Greedy MAP |
| rdrobust | Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs |
| Rdroolsjars | Rdrools JARs |
| rdrop2 | Programmatic Interface to the 'Dropbox' API |
| Rdrw | Univariate and Multivariate Damped Random Walk Processes |
| rdryad | Access for Dryad Web Services |
| RDS | Respondent-Driven Sampling |
| Rdsdp | R Interface to DSDP Semidefinite Programming Library |
| RDSsamplesize | RDS Sample Size Estimation and Power Calculation |
| RDStreeboot | RDS Tree Bootstrap Method |
| Rdta | Data Transforming Augmentation for Linear Mixed Models |
| rdtLite | Provenance Collector |
| Rdtq | Density Tracking by Quadrature |
| Rduino | A Microcontroller Interface |
| rdwd | Select and Download Climate Data from 'DWD' (German Weather Service) |
| rdwplus | An Implementation of IDW-PLUS |
| re2 | R Interface to Google RE2 (C++) Regular Expression Library |
| reactable | Interactive Data Tables Based on 'React Table' |
| reactablefmtr | Streamlined Table Styling and Formatting for Reactable |
| reactlog | Reactivity Visualizer for 'shiny' |
| reactR | React Helpers |
| ReacTran | Reactive Transport Modelling in 1d, 2d and 3d |
| read.dbc | Read Data Stored in DBC (Compressed DBF) Files |
| read.gb | Open GenBank Files |
| read.gt3x | Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data |
| readABF | Loads Axon Binary Files |
| readabs | Download and Tidy Time Series Data from the Australian Bureau of Statistics |
| readbitmap | Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF) |
| readBrukerFlexData | Reads Mass Spectrometry Data in Bruker *flex Format |
| readbulk | Read and Combine Multiple Data Files |
| ReadDIM | Read ESA SNAP Processed Raster Format in R |
| reader | Suite of Functions to Flexibly Read Data from Files |
| readHAC | Read Acoustic HAC Format |
| readit | Effortlessly Read Any Rectangular Data |
| readJDX | Import Data in the JCAMP-DX Format |
| readMLData | Reading Machine Learning Benchmark Data Sets in Different Formats |
| readmnist | Read MNIST Dataset |
| readmoRe | Utilities for Importing and Manipulating Biomedical Data Files |
| readMzXmlData | Reads Mass Spectrometry Data in mzXML Format |
| readobj | Fast Reader for 'Wavefront' OBJ 3D Scene Files |
| readODS | Read and Write ODS Files |
| readOffice | Read Text Out of Modern Office Files |
| readr | Read Rectangular Text Data |
| readrba | Download and Tidy Data from the Reserve Bank of Australia |
| readroper | Simply Read ASCII Single and Multicard Polling Datasets |
| readsdmx | Read SDMX-XML Data |
| readsdr | Translate Models from System Dynamics Software into 'R' |
| readsparse | Read and Write Sparse Matrices in 'SVMLight' and 'LibSVM' Formats |
| readstata13 | Import 'Stata' Data Files |
| readtext | Import and Handling for Plain and Formatted Text Files |
| readtextgrid | Read in a 'Praat' 'TextGrid' File |
| readthat | Read Text Data |
| readwritesqlite | Enhanced Reading and Writing for 'SQLite' Databases |
| readxl | Read Excel Files |
| readxlsb | Read 'Excel' Binary (.xlsb) Workbooks |
| realtest | When Expectations Meet Reality: Realistic Unit Testing |
| RealVAMS | Multivariate VAM Fitting |
| Rearrangement | Monotonize Point and Interval Functional Estimates by Rearrangement |
| rearrr | Rearranging Data |
| reasonabletools | Clean Water Quality Data for NPDES Reasonable Potential Analyses |
| REAT | Regional Economic Analysis Toolbox |
| REBayes | Empirical Bayes Estimation and Inference |
| rebird | R Client for the eBird Database of Bird Observations |
| rebus | Build Regular Expressions in a Human Readable Way |
| rebus.base | Core Functionality for the 'rebus' Package |
| rebus.datetimes | Date and Time Extensions for the 'rebus' Package |
| rebus.numbers | Numeric Extensions for the 'rebus' Package |
| rebus.unicode | Unicode Extensions for the 'rebus' Package |
| RECA | Relevant Component Analysis for Supervised Distance Metric Learning |
| recapr | Two Event Mark-Recapture Experiment |
| RecAssoRules | Recursive Mining for Frequent Pattern and Confident Association Rules |
| recexcavAAR | 3D Reconstruction of Archaeological Excavations |
| rechonest | R Interface to Echo Nest API |
| recipes | Preprocessing and Feature Engineering Steps for Modeling |
| reclin | Record Linkage Toolkit |
| reclin2 | Record Linkage Toolkit |
| recluster | Ordination Methods for the Analysis of Beta-Diversity Indices |
| recmap | Compute the Rectangular Statistical Cartogram |
| Recocrop | Ecocrop: Estimating Environmental Suitability for Plants |
| recodeflow | Interface Functions for PMML Creation, and Data Recoding |
| recoder | A Simple and Flexible Recoder |
| recogito | Interactive Annotation of Text and Images |
| recolorize | Color-Based Image Segmentation |
| recom | 'Recom' REmoves COMments of Rscript File for you |
| recombinator | Recombinate Nested Lists to Dataframes |
| recometrics | Evaluation Metrics for Implicit-Feedback Recommender Systems |
| recommenderlab | Lab for Developing and Testing Recommender Algorithms |
| recommenderlabBX | Book-Crossing Dataset (BX) for 'recommenderlab' |
| recommenderlabJester | Jester Dataset for 'recommenderlab' |
| Recon | Computational Tools for Economics |
| reconstructKM | Reconstruct Individual-Level Data from Published KM Plots |
| reconstructr | Session Reconstruction and Analysis |
| recorder | Toolkit to Validate New Data for a Predictive Model |
| RecordLinkage | Record Linkage Functions for Linking and Deduplicating Data Sets |
| Records | Record Values and Record Times |
| RecordTest | Inference Tools in Time Series Based on Record Statistics |
| recosystem | Recommender System using Matrix Factorization |
| recurse | Computes Revisitation Metrics for Trajectory Data |
| red | IUCN Redlisting Tools |
| reda | Recurrent Event Data Analysis |
| ReDaMoR | Relational Data Modeler |
| REdaS | Companion Package to the Book 'R: Einführung durch angewandte Statistik' |
| redcapAPI | Interface to 'REDCap' |
| REDCapExporter | Automated Construction of R Data Packages from REDCap Projects |
| REDCapR | Interaction Between R and REDCap |
| RedditExtractoR | Reddit Data Extraction Toolkit |
| reddPrec | Reconstruction of Daily Data - Precipitation |
| REddyProc | Post Processing of (Half-)Hourly Eddy-Covariance Measurements |
| REddyProcNCDF | Reading Data from NetCDF Files for 'REddyProc' |
| ReDirection | Predict Dominant Direction of Reactions of a Biochemical Network |
| RedisBaseContainer | The Container for the DockerParallel Package |
| Rediscover | Identify Mutually Exclusive Mutations |
| redist | Simulation Methods for Legislative Redistricting |
| redistmetrics | Redistricting Metrics |
| redland | RDF Library Bindings in R |
| redlistr | Tools for the IUCN Red List of Ecosystems and Species |
| rEDM | Empirical Dynamic Modeling ('EDM') |
| Redmonder | Microsoft(r)-Inspired Color Palettes |
| redoc | Generates 'Redoc' Documentation from an 'OpenAPI' Specification |
| redR | REgularization by Denoising (RED) |
| redux | R Bindings to 'hiredis' |
| REEMtree | Regression Trees with Random Effects for Longitudinal (Panel) Data |
| ref.ICAR | Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data |
| refer | Create Object References |
| referenceIntervals | Reference Intervals |
| refineR | Reference Interval Estimation using Real-World Data |
| refinr | Cluster and Merge Similar Values Within a Character Vector |
| refitME | Measurement Error Modelling using MCEM |
| RefManageR | Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management |
| refnr | Refining Data Table Using a Set of Formulas |
| refreg | Conditional Multivariate Reference Regions |
| refreshr | Work with Refreshable Datasets that Update their Data Automatically |
| refset | Subsets with Reference Semantics |
| refuge | Locate Trans and Intersex-Friendly Toilets |
| refund | Regression with Functional Data |
| refund.shiny | Interactive Plotting for Functional Data Analyses |
| regclass | Tools for an Introductory Class in Regression and Modeling |
| regDIF | Regularized Differential Item Functioning |
| REGENT | Risk Estimation for Genetic and Environmental Traits |
| regexPipes | Wrappers Around 'base::grep()' for Use with Pipes |
| regexSelect | Regular Expressions in 'shiny' Select Lists |
| regfilter | Elimination of Noisy Samples in Regression Datasets using Noise Filters |
| reghelper | Helper Functions for Regression Analysis |
| regional | Intra- and Inter-Regional Similarity |
| regioncode | Convert Region Names and Division Codes of China Over Years |
| regions | Processing Regional Statistics |
| registr | Curve Registration for Exponential Family Functional Data |
| registry | Infrastructure for R Package Registries |
| RegKink | Regression Kink with a Time-Varying Threshold |
| reglogit | Simulation-Based Regularized Logistic Regression |
| regmed | Regularized Mediation Analysis |
| regmedint | Regression-Based Causal Mediation Analysis with Interaction and Effect Modification Terms |
| regnet | Network-Based Regularization for Generalized Linear Models |
| rego | Automatic Time Series Forecasting and Missing Value Imputation |
| regplot | Enhanced Regression Nomogram Plot |
| regport | Regression Model Processing Port |
| regr.easy | Easy Linear, Quadratic and Cubic Regression Models |
| regrap | Reverse Graphical Approaches |
| regress | Gaussian Linear Models with Linear Covariance Structure |
| RegressionFactory | Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions |
| regressoR | Regression Data Analysis System |
| regrrr | Toolkit for Compiling, (Post-Hoc) Testing, and Plotting Regression Results |
| regRSM | Random Subspace Method (RSM) for Linear Regression |
| RegSDC | Information Preserving Regression-Based Tools for Statistical Disclosure Control |
| regsem | Regularized Structural Equation Modeling |
| regspec | Non-Parametric Bayesian Spectrum Estimation for Multirate Data |
| regsubseq | Detect and Test Regular Sequences and Subsequences |
| regtomean | Regression Toward the Mean |
| regtools | Regression and Classification Tools |
| RegularizedSCA | Regularized Simultaneous Component Based Data Integration |
| regweight | Convenience Functions for Implicit Regression Weights |
| rehh | Searching for Footprints of Selection using 'Extended Haplotype Homozygosity' Based Tests |
| rehh.data | Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests |
| rehydratoR | Downloads Tweets from a List of Tweet IDs |
| ReinforcementLearning | Model-Free Reinforcement Learning |
| ReIns | Functions from "Reinsurance: Actuarial and Statistical Aspects" |
| reinstallr | Search and Install Missing Packages |
| reinsureR | Reinsurance Treaties Application |
| relaimpo | Relative Importance of Regressors in Linear Models |
| relatable | Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations |
| Relatedness | Maximum Likelihood Estimation of Relatedness using EM Algorithm |
| relations | Data Structures and Algorithms for Relations |
| reldist | Relative Distribution Methods |
| Relectoral | Electoral Analysis |
| relen | Compute Relative Entropy |
| relevance | Calculate Relevance |
| relevent | Relational Event Models |
| relgam | Reluctant Generalized Additive Models |
| reliabilitydiag | Reliability Diagrams Using Isotonic Regression |
| relimp | Relative Contribution of Effects in a Regression Model |
| RelimpPCR | Relative Importance PCA Regression |
| relliptical | The Truncated Elliptical Family of Distributions |
| relSim | Relative Simulator |
| relsurv | Relative Survival |
| rem | Relational Event Models (REM) |
| rema | Rare Event Meta Analysis |
| remap | Regional Spatial Modeling with Continuous Borders |
| rematch | Match Regular Expressions with a Nicer 'API' |
| rematch2 | Tidy Output from Regular Expression Matching |
| remedy | 'RStudio' Addins to Simplify 'Markdown' Writing |
| remindR | Insert and Extract "Reminders" from Function Comments |
| remiod | Reference-Based Multiple Imputation for Ordinal/Binary Response |
| rEMM | Extensible Markov Model for Modelling Temporal Relationships Between Clusters |
| remote | Empirical Orthogonal Teleconnections in R |
| remoter | Remote R: Control a Remote R Session from a Local One |
| remotes | R Package Installation from Remote Repositories, Including 'GitHub' |
| remss | Refining Evaluation Methodology on Stage System |
| rENA | Epistemic Network Analysis |
| renderthis | Render Slides to Different Formats |
| REndo | Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables |
| Renext | Renewal Method for Extreme Values Extrapolation |
| renpow | Renewable Power Systems and the Environment |
| rentrez | 'Entrez' in R |
| renv | Project Environments |
| Renvlp | Computing Envelope Estimators |
| RenvModule | Interface to Allow Full Use of the Environment Modules System for Unix |
| renz | R-Enzymology |
| ReorderCluster | Reordering the Dendrogram According to the Class Labels |
| repairData | Open Repair Alliance Datasets 2021 |
| repana | Repeatable Analysis in R |
| RepaymentPlan | Calculation of Mortgage Plan or Repayment Plan |
| repeated | Non-Normal Repeated Measurements Models |
| repec | Access RePEc Data Through API |
| repello | Reports from Trello in R |
| RepertoiR | Repertoire Graphical Visualization |
| repfdr | Replicability Analysis for Multiple Studies of High Dimension |
| replacer | A Value Replacement Utility |
| REPLesentR | Presentations in the REPL |
| Replicate | Statistical Metrics for Multisite Replication Studies |
| replicateBE | Average Bioequivalence with Expanding Limits (ABEL) |
| replicatedpp2w | Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns |
| Replication | Test Replications by Means of the Prior Predictive p-Value |
| replicationInterval | Replication Interval Functions |
| ReplicationSuccess | Design and Analysis of Replication Studies |
| Repliscope | Replication Timing Profiling using DNA Copy Number |
| repmis | Miscellaneous Tools for Reproducible Research |
| repmod | Create Report Table from Different Objects |
| repo | A Data-Centered Data Flow Manager |
| RepoGenerator | Generates a Project and Repo for Easy Initialization of a Workshop |
| repolr | Repeated Measures Proportional Odds Logistic Regression |
| report | Automated Reporting of Results and Statistical Models |
| reporter | Creates Statistical Reports |
| repoRter.nih | R Interface to the 'NIH RePORTER Project' API |
| reportfactory | Lightweight Infrastructure for Handling Multiple R Markdown Documents |
| reportr | A General Message and Error Reporting System |
| reportReg | An Easy Way to Report Regression Analysis |
| reportROC | An Easy Way to Report ROC Analysis |
| reporttools | Generate "LaTeX"" Tables of Descriptive Statistics |
| REPPlab | R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit |
| REPPlabShiny | 'REPPlab' via a Shiny Application |
| repr | Serializable Representations |
| representr | Create Representative Records After Entity Resolution |
| represtools | Reproducible Research Tools |
| reprex | Prepare Reproducible Example Code via the Clipboard |
| reproducer | Reproduce Statistical Analyses and Meta-Analyses |
| reproducible | A Set of Tools that Enhance Reproducibility Beyond Package Management |
| reproj | Coordinate System Transformations for Generic Map Data |
| REPTILE | Regulatory DNA Element Prediction |
| repurrrsive | Examples of Recursive Lists and Nested or Split Data Frames |
| reqres | Powerful Classes for HTTP Requests and Responses |
| request | High Level 'HTTP' Client |
| Require | Installing and Loading R Packages for Reproducible Workflows |
| requiRements | Helper Package to Install Packages for R |
| requireR | R Source Code Modularizer |
| rerandPower | Power and Sample Size Calculations for Completely Randomized and Rerandomized Experiments |
| rerddap | General Purpose Client for 'ERDDAP' Servers |
| rerddapXtracto | Extracts Environmental Data from 'ERDDAP' Web Services |
| REREFACT | Reordering and/or Reflecting Factors for Simulation Studies with Exploratory Factor Analysis |
| reReg | Recurrent Event Regression |
| resample | Resampling Functions |
| resampledata | Data Sets for Mathematical Statistics with Resampling in R |
| rescue | Bootstrap Imputation for Single-Cell RNA-Seq Data |
| ResearchAssociate | Retrieving Publications from PubMed Database Based on User Query |
| resemble | Memory-Based Learning in Spectral Chemometrics |
| reservoir | Tools for Analysis, Design, and Operation of Water Supply Storages |
| resevol | Simulate Agricultural Production and Evolution of Pesticide Resistance |
| reshape | Flexibly Reshape Data |
| reshape2 | Flexibly Reshape Data: A Reboot of the Reshape Package |
| ResidentialEnergyConsumption | Residential Energy Consumption Data |
| ResistorArray | Electrical Properties of Resistor Networks |
| resourcer | Resource Resolver |
| ResourceSelection | Resource Selection (Probability) Functions for Use-Availability Data |
| RespirAnalyzer | Analysis Functions of Respiratory Data |
| respirometry | Tools for Conducting and Analyzing Respirometry Experiments |
| responsePatterns | Screening for Careless Responding Patterns |
| respR | Import, Process, Analyse, and Calculate Rates from Respirometry Data |
| RESS | Integrates R and Essentia |
| restatapi | Search and Retrieve Data from Eurostat Database |
| restaurant | Restaurant Data for Entity Resolution |
| restfulr | R Interface to RESTful Web Services |
| restimizeapi | Functions for Working with the 'www.estimize.com' Web Services |
| restoptr | Ecological Restoration Planning |
| restorepoint | Debugging with Restore Points |
| restrictedMVN | Multivariate Normal Restricted by Affine Constraints |
| restriktor | Restricted Statistical Estimation and Inference for Linear Models |
| RestRserve | A Framework for Building HTTP API |
| resumer | Build Resumes with R |
| rethinker | RethinkDB Client |
| rethnicity | Predicting Ethnic Group from Names |
| reticulate | Interface to 'Python' |
| retistruct | Retinal Reconstruction Program |
| retriever | Generate Disease-Specific Response Signatures from the LINCS-L1000 Data |
| retrodesign | Tools for Type S (Sign) and Type M (Magnitude) Errors |
| retroharmonize | Ex Post Survey Data Harmonization |
| retrosheet | Import Professional Baseball Data from 'Retrosheet' |
| retry | Repeated Evaluation |
| reutils | Talk to the NCBI EUtils |
| reval | Argument Table Generation for Sensitivity Analysis |
| revdbayes | Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis |
| revealedPrefs | Revealed Preferences and Microeconomic Rationality |
| revealjs | R Markdown Format for 'reveal.js' Presentations |
| RevEcoR | Reverse Ecology Analysis on Microbiome |
| reveneraR | Connect to Your 'Revenera' (Formerly 'Revulytics') Data |
| revengc | Reverse Engineering Summarized Data |
| reverseR | Linear Regression Stability to Significance Reversal |
| revgeo | Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing |
| ReviewR | A Light-Weight, Portable Tool for Reviewing Individual Patient Records |
| revpref | Tools for Computational Revealed Preference Analysis |
| revss | Robust Estimation in Very Small Samples |
| Revticulate | Interaction with "RevBayes" in R |
| revtools | Tools to Support Evidence Synthesis |
| revulyticsR | Connect to Your 'Revulytics' Data |
| rewie | Data Preparation and Diagnostics for Random Effects Within Estimator |
| rex | Friendly Regular Expressions |
| Rexperigen | R Interface to Experigen |
| rexpokit | R Wrappers for EXPOKIT; Other Matrix Functions |
| rextendr | Call Rust Code from R using the 'extendr' Crate |
| Rfacebook | Access to Facebook API via R |
| rfacebookstat | Load Data from Facebook API Marketing |
| rfacts | R Interface to 'FACTS' on Unix-Like Systems |
| Rfast | A Collection of Efficient and Extremely Fast R Functions |
| Rfast2 | A Collection of Efficient and Extremely Fast R Functions II |
| RFCCA | Random Forest with Canonical Correlation Analysis |
| RFclust | Random Forest Cluster Analysis |
| RfEmpImp | Multiple Imputation using Chained Random Forests |
| rFerns | Random Ferns Classifier |
| rFIA | Estimation of Forest Variables using the FIA Database |
| rfieldclimate | Client for the 'FieldClimate' API |
| rfigshare | An R Interface to 'figshare' |
| rfinterval | Predictive Inference for Random Forests |
| rfishbase | R Interface to 'FishBase' |
| RFishBC | Back-Calculation of Fish Length |
| rfishdraw | Automatically Generated Fish Drawings via JavaScript |
| rfisheries | 'Programmatic Interface to the 'openfisheries.org' API' |
| rfishnet2 | Exploratory Data Analysis for FishNet2 Data |
| Rfit | Rank-Based Estimation for Linear Models |
| rflashtext | FlashText Algorithm for Finding and Replacing Words |
| rflexscan | The Flexible Spatial Scan Statistic |
| RFLPtools | Tools to Analyse RFLP Data |
| rflsgen | R Interface to the 'Flsgen' Neutral Landscape Generator with Targets on Landscape Indices |
| rfm | Recency, Frequency and Monetary Value Analysis |
| RFmerge | Merging of Satellite Datasets with Ground Observations using Random Forests |
| Rfmtool | Fuzzy Measure Tools |
| rfoaas | R Interface to 'FOAAS' |
| RFOC | Graphics for Spherical Distributions and Earthquake Focal Mechanisms |
| Rfolding | The Folding Test of Unimodality |
| rfordummies | Code Examples to Accompany the Book "R for Dummies" |
| rforensicbatwing | BATWING for Calculating Forensic Trace-Suspect Match Probabilities |
| rForest | Forest Inventory and Analysis |
| Rforestry | Random Forests, Linear Trees, and Gradient Boosting for Inference and Interpretability |
| RFormatter | R Source Code Formatter |
| rfPermute | Estimate Permutation p-Values for Random Forest Importance Metrics |
| RFpredInterval | Prediction Intervals with Random Forests and Boosted Forests |
| Rfractran | A 'FRACTRAN' Interpreter and Some Helper Functions |
| rFSA | Feasible Solution Algorithm for Finding Best Subsets and Interactions |
| Rfssa | Functional Singular Spectrum Analysis |
| rFUSION | Interface to FUSION |
| rfUtilities | Random Forests Model Selection and Performance Evaluation |
| rfVarImpOOB | Unbiased Variable Importance for Random Forests |
| rfvimptest | Sequential Permutation Testing of Random Forest Variable Importance Measures |
| rfviz | Interactive Visualization Tool for Random Forests |
| Rga4gh | An Interface to the GA4GH API |
| rgabriel | Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot |
| RGAN | Generative Adversarial Nets (GAN) in R |
| Rgb | The R Genome Browser |
| rgbif | Interface to the Global Biodiversity Information Facility API |
| RGBM | LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction |
| Rgbp | Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data |
| RGCCA | Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data |
| rgdal | Bindings for the 'Geospatial' Data Abstraction Library |
| rgdax | Wrapper for 'Coinbase Pro (erstwhile GDAX)' Cryptocurrency Exchange |
| RGE | Response from Genotype to Environment |
| RGeckoboard | R API for Geckoboard |
| rgee | R Bindings for Calling the 'Earth Engine' API |
| rgen | Random Sampling Distribution C++ Routines for Armadillo |
| RGenData | Generates Multivariate Nonnormal Data and Determines How Many Factors to Retain |
| RGENERATE | Tools to Generate Vector Time Series |
| RGENERATEPREC | Tools to Generate Daily-Precipitation Time Series |
| RGenetics | R packages for genetics research |
| rgenius | Get 'Genius' API Lyrics |
| rgenoud | R Version of GENetic Optimization Using Derivatives |
| rgeoda | R Library for Spatial Data Analysis |
| RGeode | Geometric Density Estimation |
| rgeolocate | IP Address Geolocation |
| rgeopat2 | Additional Functions for 'GeoPAT' 2 |
| rgeoprofile | Geographic Profiling Methods for Serial Crime Analysis |
| rgeos | Interface to Geometry Engine - Open Source ('GEOS') |
| rgexf | Build, Import and Export GEXF Graph Files |
| RGF | Regularized Greedy Forest |
| Rgff | R Utilities for GFF Files |
| rGhanaCensus | 2021 Ghana Population and Housing Census Results as Data Frames |
| RGIFT | Create quizzes in GIFT Format |
| RGISTools | Handling Multiplatform Satellite Images |
| rgl | 3D Visualization Using OpenGL |
| rgl2gltf | Read and Write '.gltf' and '.glb' Files |
| rglobi | R Interface to Global Biotic Interactions |
| Rglpk | R/GNU Linear Programming Kit Interface |
| rglplus | Extension of the 'rgl' 3D Visualization Package |
| rglwidget | 'rgl' in 'htmlwidgets' Framework |
| RGMM | Robust Mixture Model |
| rgnparser | Parse Scientific Names |
| rgoogleads | Loading Data from 'Google Ads API' |
| RGoogleAnalytics | R Wrapper for the Google Analytics API |
| RGoogleAnalyticsPremium | Unsampled Data in R for Google Analytics Premium Accounts |
| RGoogleFit | R Interface to Google Fit API |
| RgoogleMaps | Overlays on Static Maps |
| rgoogleslides | R Interface to Google Slides |
| rgplates | R Interface for the GPlates Web Service and Desktop Application |
| rgraph6 | Representing Graphs as 'graph6', 'digraph6' or 'sparse6' Strings |
| RGraphics | Data and Functions from the Book R Graphics, Third Edition |
| rgrass | Interface Between 'GRASS' Geographical Information System and 'R' |
| rgrass7 | Interface Between GRASS Geographical Information System and R |
| rgrassdoc | Consult 'Grass GIS' Documentation in the RStudio Viewer or your Browser |
| RGreenplum | Interface to 'Greenplum' Database |
| RGremlinsConjoint | Estimate the "Gremlins in the Data" Model for Conjoint Studies |
| rGroovy | Groovy Language Integration |
| rgsp | Repetitive Group Sampling Plan Based on Cpk |
| rgtmx | Manage GTmetrix Tests in R |
| rgugik | Search and Retrieve Spatial Data from 'GUGiK' |
| rgw | Goodman-Weare Affine-Invariant Sampling |
| RH2 | DBI/RJDBC Interface to H2 Database |
| rhandsontable | Interface to the 'Handsontable.js' Library |
| RHawkes | Renewal Hawkes Process |
| RHclust | Vectors in Partitioning |
| rhcoclust | Robust Hierarchical Co-Clustering to Identify Significant Co-Cluster |
| rheroicons | A Zero Dependency 'SVG' Icon Library for 'Shiny' |
| rhierbaps | Clustering Genetic Sequence Data Using the HierBAPS Algorithm |
| rhino | A Framework for Enterprise Shiny Applications |
| rhli | An R Implementation of the FIS MarketMap C-Toolkit |
| rhmc | Hamiltonian Monte Carlo |
| RHMS | Hydrologic Modelling System for R Users |
| rhnerm | Random Heteroscedastic Nested Error Regression |
| rhoR | Rho for Inter Rater Reliability |
| rhosa | Higher-Order Spectral Analysis |
| rhosp | Side Effect Risks in Hospital : Simulation and Estimation |
| RHPCBenchmark | Benchmarks for High-Performance Computing Environments |
| RhpcBLASctl | Control the Number of Threads on 'BLAS' |
| RHRT | Heart Rate Turbulence Analysis |
| RHRV | Heart Rate Variability Analysis of ECG Data |
| RHSDB | Ryan-Holm Step-Down Bonferroni or Sidak Procedure |
| rhub | Connect to 'R-hub' |
| RHybridFinder | Identification of Hybrid Peptides in Immunopeptidomic Analyses |
| rhymer | Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words |
| rhype | Work with Hypergraphs in R |
| ri2 | Randomization Inference for Randomized Experiments |
| RI2by2 | Randomization Inference for Treatment Effects on a Binary Outcome |
| RIA | Radiomics Image Analysis Toolbox for Medial Images |
| riAFTBART | A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes |
| ribd | Pedigree-based Relatedness Coefficients |
| ricegeneann | Gene Annotation of Rice (Oryza Sativa L.spp.japonica) |
| riceidconverter | Convert Biological ID from RAP or MSU to SYMBOL for Oryza Sativa |
| riceware | A Diceware Passphrase Implementation |
| rich | Computes and Compares Species Richnesses |
| ricu | Intensive Care Unit Data with R |
| RIdeogram | Drawing SVG Graphics to Visualize and Map Genome-Wide Data on Idiograms |
| ridge | Ridge Regression with Automatic Selection of the Penalty Parameter |
| ridigbio | Interface to the iDigBio Data API |
| ridittools | Useful Functions for Ridit Analysis |
| riem | Accesses Weather Data from the Iowa Environment Mesonet |
| Riemann | Learning with Data on Riemannian Manifolds |
| RiemBase | Functions and C++ Header Files for Computation on Manifolds |
| Riex | IEX Stocks and Market Data |
| rifle | Sparse Generalized Eigenvalue Problem |
| RIFS | Random Iterated Function System |
| rigr | Regression, Inference, and General Data Analysis Tools in R |
| riingo | An R Interface to the 'Tiingo' Stock Price API |
| Rilostat | ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service |
| rim | R's Interface to Maxima, Bringing Symbolic Computation into R |
| RImageJROI | Read 'ImageJ' Region of Interest (ROI) Files |
| RImagePalette | Extract the Colors from Images |
| RImpact | Calculates Measures of Scholarly Impact |
| rinat | Access 'iNaturalist' Data Through APIs |
| ring | Circular / Ring Buffers |
| ringostat | Load Data from 'Ringostat API' |
| RInno | An Installation Framework for Shiny Apps |
| RInside | C++ Classes to Embed R in C++ (and C) Applications |
| RInSp | R Individual Specialization |
| rIntervalTree | An Interval Tree Tool for Real Numbers |
| rintimg | View Images on Full Screen in 'RMarkdown' Documents and 'shiny' Applications |
| rintrojs | Wrapper for the 'Intro.js' Library |
| rio | A Swiss-Army Knife for Data I/O |
| rioja | Analysis of Quaternary Science Data |
| riot | R Inputs/Outputs for Tractography |
| rIP | Detects Fraud in Online Surveys by Tracing, Scoring, and Visualizing IP Addresses |
| Rip46 | Utils for IP4 and IP6 Addresses |
| ripserr | Calculate Persistent Homology with Ripser-Based Engines |
| Rirt | Data Analysis and Parameter Estimation Using Item Response Theory |
| RISCA | Causal Inference and Prediction in Cohort-Based Analyses |
| rise | Conduct RISE Analysis |
| rIsing | High-Dimensional Ising Model Selection |
| Risk | Computes 26 Financial Risk Measures for Any Continuous Distribution |
| riskclustr | Functions to Study Etiologic Heterogeneity |
| riskCommunicator | G-Computation to Estimate Interpretable Epidemiological Effects |
| riskmetric | Risk Metrics to Evaluating R Packages |
| riskParityPortfolio | Design of Risk Parity Portfolios |
| RiskPortfolios | Computation of Risk-Based Portfolios |
| riskPredictClustData | Assessing Risk Predictions for Clustered Data |
| riskR | Risk Management |
| riskRegression | Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks |
| risksetROC | Riskset ROC Curve Estimation from Censored Survival Data |
| riskSimul | Risk Quantification for Stock Portfolios under the T-Copula Model |
| riskyr | Rendering Risk Literacy more Transparent |
| RISmed | Download Content from NCBI Databases |
| Rita | Automated Transformations, Normality Testing, and Reporting |
| Ritc | Isothermal Titration Calorimetry (ITC) Data Analysis |
| ritis | Integrated Taxonomic Information System Client |
| RItools | Randomization Inference Tools |
| riv | Robust Instrumental Variables Estimator |
| RiverBuilder | River Generation for Given Data Sets |
| riverconn | Common Fragmentation and Connectivity Indices for Riverscapes |
| riverdist | River Network Distance Computation and Applications |
| RiverLoad | Load Estimation of River Compounds with Different Methods |
| rivernet | Read, Analyze and Plot River Networks |
| riverplot | Sankey or Ribbon Plots |
| Rivivc | In Vitro in Vivo Correlation Linear Level "A" |
| rivr | Steady and Unsteady Open-Channel Flow Computation |
| rjade | A Clean, Whitespace-Sensitive Template Language for Writing HTML |
| RJafroc | Artificial Intelligence Systems and Observer Performance |
| rjags | Bayesian Graphical Models using MCMC |
| rJava | Low-Level R to Java Interface |
| rjazz | Official Client for 'Jazz' |
| RJcluster | A Fast Clustering Algorithm for High Dimensional Data Based on the Gram Matrix Decomposition |
| RJDBC | Provides Access to Databases Through the JDBC Interface |
| RJDemetra | Interface to 'JDemetra+' Seasonal Adjustment Software |
| rjdmarkdown | 'rmarkdown' Extension for Formatted 'RJDemetra' Outputs |
| rjdqa | Quality Assessment for Seasonal Adjustment |
| rje | Miscellaneous Useful Functions for Statistics |
| rjmcmc | Reversible-Jump MCMC Using Post-Processing |
| rjpdmp | Reversible Jump PDMP Samplers |
| rJPSGCS | R-Interface to Gene Drop Simulation from JPSGCS |
| rjqpd | The Johnson Quantile-Parameterised Distribution |
| RJSDMX | R Interface to SDMX Web Services |
| rjson | JSON for R |
| RJSONIO | Serialize R Objects to JSON, JavaScript Object Notation |
| RJSplot | Interactive Graphs with R |
| rjstat | Handle 'JSON-stat' Format in R |
| rjwsacruncher | Interface to the 'JWSACruncher' of 'JDemetra+' |
| rkafka | Using Apache 'Kafka' Messaging Queue Through 'R' |
| rkafkajars | External Jars Required for Package 'rkafka' |
| RKEA | R/KEA Interface |
| RKEAjars | R/KEA Interface Jars |
| RKEEL | Using KEEL in R Code |
| RKEELdata | Datasets from 'KEEL' for it Use in 'RKEEL' |
| RKEELjars | Java Executable .jar Files for 'RKEEL' |
| RKelly | Translate Odds and Probabilities |
| rKenyaForex | Historical Data for Kenya Foreign Exchange Prices |
| rkeops | Kernel Operations on GPU or CPU, with Autodiff, without Memory Overflows |
| RKHSMetaMod | Ridge Group Sparse Optimization Problem for Estimation of a Meta Model Based on Reproducing Kernel Hilbert Spaces |
| RkMetrics | Hybrid Mortality Estimation |
| rKolada | Access Data from the 'Kolada' Database |
| rKOMICS | Minicircle Sequence Cluster (MSC) Analyses |
| rkt | Mann-Kendall Test, Seasonal and Regional Kendall Tests |
| RKUM | Robust Kernel Unsupervised Methods |
| rkvo | Read Key/Value Pair Observations |
| Rlab | Functions and Datasets Required for ST370 Class |
| Rlabkey | Data Exchange Between R and 'LabKey' Server |
| rLakeAnalyzer | Lake Physics Tools |
| rlang | Functions for Base Types and Core R and 'Tidyverse' Features |
| rlas | Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data |
| rlc | Create Interactive Linked Charts with Minimal Code |
| rlcv | Robust Likelihood Cross Validation Bandwidth Selection |
| Rlda | Bayesian LDA for Mixed-Membership Clustering Analysis |
| rLDCP | Text Generation from Data |
| rle | Common Functions for Run-Length Encoded Vectors |
| RLeafAngle | Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients |
| rleafmap | Interactive Maps with R and Leaflet |
| rlecuyer | R Interface to RNG with Multiple Streams |
| rlemon | R Access to LEMON Graph Algorithms |
| rless | Leaner Style Sheets |
| rlfsm | Simulations and Statistical Inference for Linear Fractional Stable Motions |
| rLFT | Processing Linear Features |
| Rlgt | Bayesian Exponential Smoothing Models with Trend Modifications |
| Rlibeemd | Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN) |
| rLiDAR | LiDAR Data Processing and Visualization |
| rliger | Linked Inference of Genomic Experimental Relationships |
| Rlinkedin | Access to the LinkedIn API via R |
| Rlinsolve | Iterative Solvers for (Sparse) Linear System of Equations |
| rlist | A Toolbox for Non-Tabular Data Manipulation |
| rlmDataDriven | Robust Regression with Data Driven Tuning Parameter |
| rlme | Rank-Based Estimation and Prediction in Random Effects Nested Models |
| Rlof | R Parallel Implementation of Local Outlier Factor(LOF) |
| rlog | A Simple, Opinionated Logging Utility |
| RLogicalOps | Process Logical Operations |
| RLRsim | Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models |
| RLT | Reinforcement Learning Trees |
| rLTP | R Interface to the 'LTP'-Cloud Service |
| RLumCarlo | Monte-Carlo Methods for Simulating Luminescence Phenomena |
| RLumModel | Solving Ordinary Differential Equations to Understand Luminescence |
| RLumShiny | 'Shiny' Applications for the R Package 'Luminescence' |
| rly | Tools to Create Formal Language Parser |
| RM.weights | Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood |
| RM2006 | RiskMetrics 2006 Methodology |
| rma.exact | Exact Confidence Intervals for Random Effects Meta-Analyses |
| RMaCzek | Czekanowski's Diagrams |
| Rmagic | MAGIC - Markov Affinity-Based Graph Imputation of Cells |
| rmake | Makefile Generator for R Analytical Projects |
| RMallow | Fit Multi-Modal Mallows' Models to Ranking Data |
| Rmalschains | Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R |
| rmangal | 'Mangal' Client |
| rmapshaper | Client for 'mapshaper' for 'Geospatial' Operations |
| rmapzen | Client for 'Mapzen' and Related Map APIs |
| rmarchingcubes | Calculate 3D Contour Meshes Using the Marching Cubes Algorithm |
| rmargint | Robust Marginal Integration Procedures |
| RMariaDB | Database Interface and MariaDB Driver |
| RmarineHeatWaves | Detect Marine Heat Waves and Marine Cold Spells |
| RMark | R Code for Mark Analysis |
| rmarkdown | Dynamic Documents for R |
| RMAT | Random Matrix Analysis Toolkit |
| rmatio | Read and Write 'Matlab' Files |
| RMAWGEN | Multi-Site Auto-Regressive Weather GENerator |
| rmBayes | Performing Bayesian Inference for Repeated-Measures Designs |
| RMBC | Robust Model Based Clustering |
| RMCC | Airborne LiDAR Filtering Method Based on Multiscale Curvature |
| rmcfs | The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery |
| rmcorr | Repeated Measures Correlation |
| rmda | Risk Model Decision Analysis |
| rmdcev | Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value Models |
| rmdfiltr | 'Lua'-Filters for R Markdown |
| rmdformats | HTML Output Formats and Templates for 'rmarkdown' Documents |
| rmdHelpers | Helper Functions for Rmd Documents |
| rmdpartials | Partial 'rmarkdown' Documents to Prettify your Reports |
| rmdplugr | Plugins for R Markdown Formats |
| rmdshower | 'R' 'Markdown' Format for 'shower' Presentations |
| rmdwc | Count Words, Chars and Non-Whitespace Chars in R Markdown Docs |
| rMEA | Synchrony in Motion Energy Analysis (MEA) Time-Series |
| RmecabKo | An 'Rcpp' Interface for Eunjeon Project |
| RMediation | Mediation Analysis Confidence Intervals |
| rmeta | Meta-Analysis |
| rmetalog | The Metalog Distribution |
| rmgarch | Multivariate GARCH Models |
| rmi | Mutual Information Estimators |
| rMIDAS | Multiple Imputation with Denoising Autoencoders |
| rminer | Data Mining Classification and Regression Methods |
| rminizinc | R Interface to 'MiniZinc' |
| rminqa | Derivative-Free Optimization in R using C++ |
| rmio | Provides 'mio' C++11 Header Files |
| rMisbeta | A Robust Missing Imputation Method for Gene Expression Data |
| Rmisc | Ryan Miscellaneous |
| Rmixmod | Classification with Mixture Modelling |
| RMixpanel | API for Mixpanel |
| RMixtComp | Mixture Models with Heterogeneous and (Partially) Missing Data |
| RMixtCompIO | Minimal Interface of the C++ 'MixtComp' Library for Mixture Models with Heterogeneous and (Partially) Missing Data |
| RMixtCompUtilities | Utility Functions for 'MixtComp' Outputs |
| RMKdiscrete | Sundry Discrete Probability Distributions |
| RMLPCA | Maximum Likelihood Principal Component Analysis |
| RMM | Revenue Management Modeling |
| RMOA | Connect R with MOA for Massive Online Analysis |
| RMOAjars | External jars Required for Package RMOA |
| rmonad | A Monadic Pipeline System |
| rmoo | Multi-Objective Optimization in R |
| Rmosek | The R to MOSEK Optimization Interface |
| Rmpfr | R MPFR - Multiple Precision Floating-Point Reliable |
| Rmpi | Interface (Wrapper) to MPI (Message-Passing Interface) |
| RMPSH | Recursive Modified Pattern Search on Hyper-Rectangle |
| rmpw | Causal Mediation Analysis Using Weighting Approach |
| rMR | Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions |
| rms | Regression Modeling Strategies |
| rmsb | Bayesian Regression Modeling Strategies |
| rmsfact | Amazing Random Facts About the World's Greatest Hacker |
| rmsfuns | Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors |
| RMSNumpress | 'Rcpp' Bindings to Native C++ Implementation of MS Numpress |
| Rmst | Computerized Adaptive Multistage Testing |
| rmt | Restricted Mean Time in Favor of Treatment |
| RMThreshold | Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis |
| RMTL | Regularized Multi-Task Learning |
| RMTstat | Distributions, Statistics and Tests Derived from Random Matrix Theory |
| rmumps | Wrapper for MUMPS Library |
| rmutil | Utilities for Nonlinear Regression and Repeated Measurements Models |
| RMVL | Mappable Vector Library for Handling Large Datasets |
| rMVP | Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS Tool |
| rmweather | Tools to Conduct Meteorological Normalisation on Air Quality Data |
| RMySQL | Database Interface and 'MySQL' Driver for R |
| rmytarget | Load Data from 'MyTarget API v2 and v3' |
| RNAseqNet | Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation |
| RNAseqQC | Quality Control for RNA-Seq Data |
| RNAsmc | RNA Secondary Structure Module Mining, Comparison and Plotting |
| rnassqs | Access Data from the NASS 'Quick Stats' API |
| rnaturalearth | World Map Data from Natural Earth |
| rnaturalearthdata | World Vector Map Data from Natural Earth Used in 'rnaturalearth' |
| RnavGraphImageData | Image Data Used in the Loon Package Demos |
| RNaviCell | Visualization of High-Throughput Data on Large-Scale Biological Networks |
| rnbp | Wrapper for the National Bank of Poland API |
| RNCBIEUtilsLibs | EUtils libraries for use in the R environment |
| RNCEP | Obtain, Organize, and Visualize NCEP Weather Data |
| rncl | An Interface to the Nexus Class Library |
| RND | Risk Neutral Density Extraction Package |
| rNeighborGWAS | Testing Neighbor Effects in Marker-Based Regressions |
| rNeighborQTL | Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects |
| RNentropy | Entropy Based Method for the Detection of Significant Variation in Gene Expression Data |
| rneos | XML-RPC Interface to NEOS |
| rnetcarto | Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R) |
| RNetCDF | Interface to 'NetCDF' Datasets |
| RNetLogo | Provides an Interface to the Agent-Based Modelling Platform 'NetLogo' |
| RNewsflow | Tools for Comparing Text Messages Across Time and Media |
| RNeXML | Semantically Rich I/O for the 'NeXML' Format |
| RNGforGPD | Random Number Generation for Generalized Poisson Distribution |
| rngSetSeed | Seeding the Default RNG with a Numeric Vector |
| rngtools | Utility Functions for Working with Random Number Generators |
| rngWELL | Toolbox for WELL Random Number Generators |
| RNHANES | Facilitates Analysis of CDC NHANES Data |
| RNifti | Fast R and C++ Access to NIfTI Images |
| RNiftyReg | Image Registration Using the 'NiftyReg' Library |
| Rnightly | A Wrapper of the 'JavaScript' Library 'Nightly' |
| rnmamod | Bayesian Network Meta-Analysis with Missing Participants |
| Rnmr1D | Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra |
| rnn | Recurrent Neural Network |
| rnoaa | 'NOAA' Weather Data from R |
| rNOMADS | An R Interface to the NOAA Operational Model Archive and Distribution System |
| RNOmni | Rank Normal Transformation Omnibus Test |
| rnpn | Interface to the National 'Phenology' Network 'API' |
| rnr | Rosenbaum and Rubin Sensitivity |
| rnrfa | UK National River Flow Archive Data from R |
| Rnumerai | Interface to the Numerai Machine Learning Tournament API |
| Rnvd3 | An Incomplete Wrapper of the 'nvd3' JavaScript Library |
| roadoi | Find Free Versions of Scholarly Publications via Unpaywall |
| roads | Road Network Projection |
| roahd | Robust Analysis of High Dimensional Data |
| ROAuth | R Interface For OAuth |
| RobAStBase | Robust Asymptotic Statistics |
| RobAStRDA | Interpolation Grids for Packages of the 'RobASt' - Family of Packages |
| robber | Using Block Model to Estimate the Robustness of Ecological Network |
| robcbi | Conditionally Unbiased Bounded Influence Estimates |
| robCompositions | Compositional Data Analysis |
| robcor | Robust Correlations |
| robcp | Robust Change-Point Tests |
| roben | Robust Bayesian Variable Selection for Gene-Environment Interactions |
| robeth | R Functions for Robust Statistics |
| robets | Forecasting Time Series with Robust Exponential Smoothing |
| RobExtremes | Optimally Robust Estimation for Extreme Value Distributions |
| robfilter | Robust Time Series Filters |
| robFitConGraph | Graph-Constrained Robust Covariance Estimation |
| robflreg | Robust Functional Linear Regression |
| RobGARCHBoot | Robust Bootstrap Forecast Densities for GARCH Models |
| robin | ROBustness in Network |
| RobinHood | Interface for the RobinHood.com No Commission Investing Platform |
| robis | Ocean Biodiversity Information System (OBIS) Client |
| RobKF | Innovative and/or Additive Outlier Robust Kalman Filtering |
| RobLox | Optimally Robust Influence Curves and Estimators for Location and Scale |
| RobLoxBioC | Infinitesimally Robust Estimators for Preprocessing -Omics Data |
| RoBMA | Robust Bayesian Meta-Analyses |
| robmed | (Robust) Mediation Analysis |
| robmixglm | Robust Generalized Linear Models (GLM) using Mixtures |
| RobMixReg | Robust Mixture Regression |
| robnptests | Robust Nonparametric Two-Sample Tests for Location/Scale |
| robomit | Robustness Checks for Omitted Variable Bias |
| robotstxt | A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker |
| RobPer | Robust Periodogram and Periodicity Detection Methods |
| robreg3S | Three-Step Regression and Inference for Cellwise and Casewise Contamination |
| robregcc | Robust Regression with Compositional Covariates |
| RobRex | Optimally Robust Influence Curves for Regression and Scale |
| RoBSA | Robust Bayesian Survival Analysis |
| robsel | Robust Selection Algorithm |
| robservable | Import an Observable Notebook as HTML Widget |
| robslopes | Fast Algorithms for Robust Slopes |
| RobStatTM | Robust Statistics: Theory and Methods |
| robsurvey | Robust Survey Statistics Estimation |
| robumeta | Robust Variance Meta-Regression |
| robust | Port of the S+ "Robust Library" |
| robust2sls | Outlier Robust Two-Stage Least Squares Inference and Testing |
| RobustAFT | Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case |
| robustarima | Robust ARIMA Modeling |
| robustbase | Basic Robust Statistics |
| RobustBayesianCopas | Robust Bayesian Copas Selection Model |
| RobustBF | Robust Solution to the Behrens-Fisher Problem |
| robustBLME | Robust Bayesian Linear Mixed-Effects Models using ABC |
| RobustCalibration | Robust Calibration of Imperfect Mathematical Models |
| robustcov | Collection of Robust Covariance and (Sparse) Precision Matrix Estimators |
| robustDA | Robust Mixture Discriminant Analysis |
| robustETM | Robust Methods using Exponential Tilt Model |
| RobustGaSP | Robust Gaussian Stochastic Process Emulation |
| robustHD | Robust Methods for High-Dimensional Data |
| RobustLinearReg | Robust Linear Regressions |
| robustlm | Robust Variable Selection with Exponential Squared Loss |
| robustlmm | Robust Linear Mixed Effects Models |
| robustmeta | Robust Inference for Meta-Analysis with Influential Outlying Studies |
| robustrank | Robust Rank-Based Tests |
| RobustRankAggreg | Methods for Robust Rank Aggregation |
| robustrao | An Extended Rao-Stirling Diversity Index to Handle Missing Data |
| robustreg | Robust Regression Functions |
| robustsae | Robust Bayesian Small Area Estimation |
| robustsur | Robust Estimation for Seemingly Unrelated Regression Models |
| robustX | 'eXtra' / 'eXperimental' Functionality for Robust Statistics |
| robvis | Visualize the Results of Risk-of-Bias (ROB) Assessments |
| Robyn | Semi-Automated Marketing Mix Modeling (MMM) from Meta Marketing Science |
| ROCaggregator | Aggregate Multiple ROC Curves into One Global ROC |
| rocc | ROC Based Classification |
| roccv | ROC for Cross Validation Results |
| ROCFTP.MMS | Perfect Sampling |
| ROCit | Performance Assessment of Binary Classifier with Visualization |
| rock | Reproducible Open Coding Kit |
| rockchalk | Regression Estimation and Presentation |
| rocker | Database Interface Class |
| ROCket | Simple and Fast ROC Curves |
| RockFab | Rock Fabric and Strain Analysis Tools |
| rockr | 'Rock' R Server Client |
| roclang | Functions for Diffusing Function Documentations into 'Roxygen' Comments |
| rocNIT | Non-Inferiority Test for Paired ROC Curves |
| rocnp | Work with Romanian Personal Numeric Codes PNC / CNP |
| ROCnReg | ROC Curve Inference with and without Covariates |
| rococo | Robust Rank Correlation Coefficient and Test |
| ROCpsych | Compute and Compare Diagnostic Test Statistics Across Groups |
| ROCR | Visualizing the Performance of Scoring Classifiers |
| ROCS | Receiver Operating Characteristics Surface |
| rocsvm.path | The Entire Solution Paths for ROC-SVM |
| rocTree | Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree |
| RODBC | ODBC Database Access |
| RODBCDBI | Provides Access to Databases Through the ODBC Interface |
| rodd | Optimal Discriminating Designs |
| rODE | Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes |
| rodeo | A Code Generator for ODE-Based Models |
| rofanova | Robust Functional Analysis of Variance |
| roger | Automated Grading of R Scripts |
| Rogue | Identify Rogue Taxa in Sets of Phylogenetic Trees |
| ROI | R Optimization Infrastructure |
| ROI.models.globalOptTests | 'ROI' Optimization Problems Based on 'globalOptTests' |
| ROI.models.miplib | 'ROI' Access to 'MIPLIB' 2010 Benchmark Instances |
| ROI.models.netlib | 'ROI' Optimization Problems Based on 'NETLIB-LP' |
| ROI.plugin.alabama | 'alabama' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.cplex | ROI Plug-in CPLEX |
| ROI.plugin.deoptim | 'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface |
| ROI.plugin.ecos | 'ECOS' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.glpk | 'ROI' Plug-in 'GLPK' |
| ROI.plugin.ipop | 'ipop' Plug-in for the 'R' Optimization Interface |
| ROI.plugin.lpsolve | 'lp_solve' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.msbinlp | 'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface |
| ROI.plugin.neos | 'NEOS' Plug-in for the 'R' Optimization Interface |
| ROI.plugin.nloptr | 'nloptr' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.optimx | 'optimx' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.osqp | 'osqp' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.qpoases | 'qpOASES' Plugin for the 'R' Optimization Infrastructure |
| ROI.plugin.quadprog | 'quadprog' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.scs | 'SCS' Plug-in for the 'R' Optimization Infrastructure |
| ROI.plugin.symphony | 'SYMPHONY' Plug-in for the 'R' Optimization Interface |
| roistats | Convenience Functions for Applying Basic Stats to Sub-Groups |
| roll | Rolling and Expanding Statistics |
| rollbar | Error Tracking and Logging |
| rolldown | R Markdown Output Formats for Storytelling |
| rollinglda | Construct Consistent Time Series from Textual Data |
| rollmatch | Rolling Entry Matching |
| rollRegres | Fast Rolling and Expanding Window Linear Regression |
| roloc | Convert Colour Specification to Colour Name |
| rolocISCCNBS | A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation |
| rolog | Query 'SWI'-'Prolog' from R |
| ROlogit | Fit Rank-Ordered Logit (RO-Logit) Model |
| rolr | Finding Optimal Three-Group Splits Based on a Survival Outcome |
| RolWinMulCor | Subroutines to Estimate Rolling Window Multiple Correlation |
| ROMDB | Get 'OMDB' API Multiple Information |
| romic | R for High-Dimensional Omic Data |
| RonFHIR | Read and Search Interface to the 'HL7 FHIR' REST API |
| Rook | Rook - a web server interface for R |
| ROOPSD | R Object Oriented Programming for Statistical Distribution |
| roots | Reconstructing Ordered Ontogenic Trajectories |
| RootsExtremaInflections | Finds Roots, Extrema and Inflection Points of a Curve |
| rootSolve | Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations |
| rootWishart | Distribution of Largest Root for Single and Double Wishart Settings |
| rope | Model Selection with FDR Control of Selected Variables |
| ropenblas | Download, Compile and Link 'OpenBLAS' Library with R |
| ROpenCVLite | Helper Package for Installing OpenCV with R |
| ropendata | Query and Download 'Rapid7' 'Cybersecurity' Data Sets |
| ROpenDota | Access OpenDota Services in R |
| ROpenFIGI | R Interface to OpenFIGI |
| ropensecretsapi | R Package for the OpenSecrets.org API |
| ROpenWeatherMap | R Interface to OpenWeatherMap API |
| roperators | Additional Operators to Help you Write Cleaner R Code |
| ropercenter | Reproducible Data Retrieval from the Roper Center Data Archive |
| Ropj | Import Origin(R) Project Files |
| roprov | Low-Level Support for Provenance Capture Between in-Memory R Objects |
| ROptEst | Optimally Robust Estimation |
| ROptEstOld | Optimally Robust Estimation - Old Version |
| roptim | General Purpose Optimization in R using C++ |
| roptions | Option Strategies and Valuation |
| ROptRegTS | Optimally Robust Estimation for Regression-Type Models |
| ROptSpace | Matrix Reconstruction from a Few Entries |
| ROracle | OCI Based Oracle Database Interface for R |
| rorcid | Interface to the 'Orcid.org' API |
| rorqual.morpho | Morphological Allometry of Rorquals |
| ROSE | Random Over-Sampling Examples |
| Rosenbrock | Extended Rosenbrock-Type Densities for Markov Chain Monte Carlo (MCMC) Sampler Benchmarking |
| rosetteApi | 'Rosette' API |
| rosm | Plot Raster Map Tiles from Open Street Map and Other Sources |
| rospca | Robust Sparse PCA using the ROSPCA Algorithm |
| rotasym | Tests for Rotational Symmetry on the Hypersphere |
| rotationForest | Fit and Deploy Rotation Forest Models |
| rotations | Working with Rotation Data |
| rotl | Interface to the 'Open Tree of Life' API |
| rotor | Log Rotation and Conditional Backups |
| RoughSets | Data Analysis Using Rough Set and Fuzzy Rough Set Theories |
| round | Rounding to Decimal Digits |
| RoundAndRound | Plot Objects Moving in Orbits |
| roundhouse | Random Chuck Norris Facts |
| Routliers | Robust Outliers Detection |
| routr | A Simple Router for HTTP and WebSocket Requests |
| roxut | Document Unit Tests Roxygen-Style |
| roxygen2 | In-Line Documentation for R |
| roxygen2md | 'Roxygen' to 'Markdown' |
| roxytest | Various Tests with 'roxygen2' |
| rPACI | Placido Analysis of Corneal Irregularity |
| rPackedBar | Packed Bar Charts with 'plotly' |
| rpact | Confirmatory Adaptive Clinical Trial Design and Analysis |
| Rpadrino | Interact with the 'PADRINO' IPM Database |
| rPAex | Automatic Detection of Experimental Unit in Precision Agriculture |
| RPANDA | Phylogenetic ANalyses of DiversificAtion |
| rpanel | Simple Interactive Controls for R using the 'tcltk' Package |
| rPanglaoDB | Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB Database |
| rpart | Recursive Partitioning and Regression Trees |
| rpart.LAD | Least Absolute Deviation Regression Trees |
| rpart.plot | Plot 'rpart' Models: An Enhanced Version of 'plot.rpart' |
| rpartScore | Classification Trees for Ordinal Responses |
| rpca | RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components |
| Rpdb | Read, Write, Visualize and Manipulate PDB Files |
| rpdo | Pacific Decadal Oscillation Index Data |
| RpeakChrom | Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak |
| RPEGLMEN | Gamma and Exponential Generalized Linear Models with Elastic Net Penalty |
| RPEIF | Computation and Plots of Influence Functions for Risk and Performance Measures |
| RPEnsemble | Random Projection Ensemble Classification |
| RPESE | Estimates of Standard Errors for Risk and Performance Measures |
| RPEXE.RPEXT | Reduced Piecewise Exponential Estimate/Test Software |
| rpf | Response Probability Functions |
| Rphylopars | Phylogenetic Comparative Tools for Missing Data and Within-Species Variation |
| rphylopic | Get 'Silhouettes' of 'Organisms' from 'Phylopic' |
| rpicosat | R Bindings for the 'PicoSAT' SAT Solver |
| rpinterest | Access Pinterest API |
| rpivotTable | Build Powerful Pivot Tables and Dynamically Slice & Dice your Data |
| rplos | Interface to the Search API for 'PLoS' Journals |
| rplotengine | R as a Plotting Engine |
| rpls | Robust Partial Least Squares |
| rplum | Bayesian Age-Depth Modelling of Cores Dated by Pb-210 |
| RPMG | Graphical User Interface (GUI) for Interactive R Analysis Sessions |
| RPMM | Recursively Partitioned Mixture Model |
| rpmodel | P-Model |
| rpms | Recursive Partitioning for Modeling Survey Data |
| rpnf | Point and Figure Package |
| Rpoet | 'PoetryDB' API Wrapper |
| Rpolyhedra | Polyhedra Database |
| Rpoppler | PDF Tools Based on Poppler |
| rportfolio | Portfolio Theory |
| rportfolios | Random Portfolio Generation |
| rpostgis | R Interface to a 'PostGIS' Database |
| RPostgres | Rcpp Interface to PostgreSQL |
| RPostgreSQL | R Interface to the 'PostgreSQL' Database System |
| rPowerSampleSize | Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate |
| RPPairwiseDesign | Resolvable partially pairwise balanced design and Space-filling design via association scheme |
| RPPanalyzer | Reads, Annotates, and Normalizes Reverse Phase Protein Array Data |
| RPPASPACE | Reverse-Phase Protein Array Super Position and Concentration Evaluation |
| rpql | Regularized PQL for Joint Selection in GLMMs |
| rPraat | Interface to Praat |
| rpredictit | Interface to the 'PredictIt' API |
| rPref | Database Preferences and Skyline Computation |
| RPresto | DBI Connector to Presto |
| rprev | Estimating Disease Prevalence from Registry Data |
| rprime | Functions for Working with 'Eprime' Text Files |
| rprintf | Adaptive Builder for Formatted Strings |
| RprobitB | Bayesian Probit Choice Modeling |
| RProbSup | Calculates Probability of Superiority |
| Rprofet | WOE Transformation and Scorecard Builder |
| rprojroot | Finding Files in Project Subdirectories |
| rprojtree | Create Folders and Files Structure for Data Science Projects |
| RProtoBuf | R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3) |
| RPscoring | Relative Placement Algorithm |
| rpsftm | Rank Preserving Structural Failure Time Models |
| RPtests | Goodness of Fit Tests for High-Dimensional Linear Regression Models |
| rptR | Repeatability Estimation for Gaussian and Non-Gaussian Data |
| RPublica | ProPublica API Client |
| rpubs | Extract Code Block from Rpubs Article |
| RPushbullet | R Interface to the Pushbullet Messaging Service |
| Rpvt | Estimate the PVT Properties of Reservoir Fluids |
| RPyGeo | ArcGIS Geoprocessing via Python |
| rpymat | Easy to Configure an Isolated 'Python' Environment |
| rQCC | Robust Quality Control Chart |
| rqdatatable | 'rquery' for 'data.table' |
| RQEntangle | Quantum Entanglement of Bipartite System |
| rqPen | Penalized Quantile Regression |
| Rquake | Seismic Hypocenter Determination |
| RQuantLib | R Interface to the 'QuantLib' Library |
| Rquefts | Quantitative Evaluation of the Native Fertility of Tropical Soils |
| rquery | Relational Query Generator for Data Manipulation at Scale |
| rr | Statistical Methods for the Randomized Response Technique |
| rr2 | R2s for Regression Models |
| Rramas | Matrix Population Models |
| rRAP | Real-Time Adaptive Penalization for Streaming Lasso Models |
| rrapply | Revisiting Base Rapply |
| rrat | Robust Regression with Asymmetric Heavy-Tail Noise Distributions |
| RRate | Estimating Replication Rate for Genome-Wide Association Studies |
| Rraven | Connecting R and 'Raven' Sound Analysis Software |
| rrBLUP | Ridge Regression and Other Kernels for Genomic Selection |
| RRBoost | A Robust Boosting Algorithm |
| rrcov | Scalable Robust Estimators with High Breakdown Point |
| rrcov3way | Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data |
| rrcovHD | Robust Multivariate Methods for High Dimensional Data |
| rrcovNA | Scalable Robust Estimators with High Breakdown Point for Incomplete Data |
| rrd | Import Data from a RRD (Round Robin Database) File |
| Rrdap | RDAP Server Querying |
| Rrdrand | 'DRNG' on Intel CPUs with the 'RdRand' Instruction for R |
| rrecsys | Environment for Evaluating Recommender Systems |
| rredlist | 'IUCN' Red List Client |
| RRedshiftSQL | R Interface to the 'Redshift' Database |
| rrefine | r Client for OpenRefine API |
| rreg | Visualization for Norwegian Health Quality Registries |
| rrepast | Invoke 'Repast Simphony' Simulation Models |
| rres | Realized Relatedness Estimation and Simulation |
| RRF | Regularized Random Forest |
| RRI | Residual Randomization Inference for Regression Models |
| rriskDistributions | Fitting Distributions to Given Data or Known Quantiles |
| rrMixture | Reduced-Rank Mixture Models |
| RRMLRfMC | Reduced-Rank Multinomial Logistic Regression for Markov Chains |
| RRNA | Secondary Structure Plotting for RNA |
| rroad | Road Condition Analysis |
| rRofex | Interface to 'Matba Rofex' Trading API |
| rrpack | Reduced-Rank Regression |
| RRphylo | Phylogenetic Ridge Regression Methods for Comparative Studies |
| RRPP | Linear Model Evaluation with Randomized Residuals in a Permutation Procedure |
| rrr | Reduced-Rank Regression |
| RRreg | Correlation and Regression Analyses for Randomized Response Data |
| RRRR | Online Robust Reduced-Rank Regression Estimation |
| rrscale | Robust Re-Scaling to Better Recover Latent Effects in Data |
| rrtable | Reproducible Research with a Table of R Codes |
| RRTCS | Randomized Response Techniques for Complex Surveys |
| rrum | Bayesian Estimation of the Reduced Reparameterized Unified Model with Gibbs Sampling |
| RSA | Response Surface Analysis |
| RSADBE | Data related to the book "R Statistical Application Development by Example" |
| rsae | Robust Small Area Estimation |
| rSAFE | Surrogate-Assisted Feature Extraction |
| RSAGA | SAGA Geoprocessing and Terrain Analysis |
| Rsagacmd | Linking R with the Open-Source 'SAGA-GIS' Software |
| RSAlgaeR | Builds Empirical Remote Sensing Models of Water Quality Variables and Analyzes Long-Term Trends |
| rsample | General Resampling Infrastructure |
| Rsampling | Ports the Workflow of "Resampling Stats" Add-in to R |
| RSarules | Random Sampling Association Rules from a Transaction Dataset |
| RSauceLabs | R Wrapper for 'SauceLabs' REST API |
| RSBJson | Handle R Requests from R Service Bus Applications with JSON Payloads |
| rsbp | Part Information from the Registry of Standard Biological Parts |
| RSC | Robust and Sparse Correlation Matrix |
| rSCA | An R Package for Stepwise Cluster Analysis |
| rscala | Bridge Between 'R' and 'Scala' with Callbacks |
| RSCAT | Shadow-Test Approach to Computerized Adaptive Testing |
| rscc | R Source Code Similarity Evaluation by Variable/Function Names |
| RScelestial | Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference |
| rscimark | SciMark 2.0 Benchmark for Scientific and Numerical Computing |
| RSclient | Client for Rserve |
| Rsconctdply | Deploys Multiple 'Shiny' Apps using Configuration File |
| rsconnect | Deployment Interface for R Markdown Documents and Shiny Applications |
| rscontract | Generic implementation of the 'RStudio' connections contract |
| rscopus | Scopus Database 'API' Interface |
| rscorecard | A Method to Download Department of Education College Scorecard Data |
| RSDA | R to Symbolic Data Analysis |
| rsdepth | Ray Shooting Depth (i.e. RS Depth) Functions for Bivariate Analysis |
| RSDK | Sudoku with R |
| rsdmx | Tools for Reading SDMX Data and Metadata |
| rsdNE | Response Surface Designs with Neighbour Effects (rsdNE) |
| RSE | Number of Newly Discovered Rare Species Estimation |
| rSEA | Simultaneous Enrichment Analysis |
| RSeed | Borenstein Analysis |
| rseedcalc | Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing |
| RSEIS | Seismic Time Series Analysis Tools |
| RSelenium | R Bindings for 'Selenium WebDriver' |
| rsem | Robust Structural Equation Modeling with Missing Data and Auxiliary Variables |
| RSentiment | Analyse Sentiment of English Sentences |
| Rserve | Binary R server |
| rsetse | Strain Elevation Tension Spring Embedding |
| rsf | Report of Statistical Findings in 'bookdown' |
| rSFA | Slow Feature Analysis |
| Rsfar | Seasonal Functional Autoregressive Models |
| Rsgf | SGF (Smart Game File) File Format Import |
| RSGHB | Functions for Hierarchical Bayesian Estimation: A Flexible Approach |
| rSHAPE | Simulated Haploid Asexual Population Evolution |
| rshift | Paleoecology Functions for Regime Shift Analysis |
| RSiena | Siena - Simulation Investigation for Empirical Network Analysis |
| RsimMosaic | R Simple Image Mosaic Creation Library |
| rsimsum | Analysis of Simulation Studies Including Monte Carlo Error |
| rsinaica | Download Data from Mexico's Air Quality Information System |
| RSIP | Remote Sensing and Image Processing |
| RSiteCatalyst | R Client for Adobe Analytics API V1.4 |
| RSizeBiased | Hypothesis Testing Based on R-Size Biased Samples |
| RSKC | Robust Sparse K-Means |
| rskey | Create Custom 'Rstudio' Keyboard Shortcuts |
| rsleep | Analysis of Sleep Data |
| rslp | A Stemming Algorithm for the Portuguese Language |
| rslurm | Submit R Calculations to a 'Slurm' Cluster |
| rsm | Response-Surface Analysis |
| RSmallTelescopes | Empirical Small Telescopes Analysis |
| RSmartlyIO | Loading Facebook and Instagram Advertising Data from 'Smartly.io' |
| rsmatrix | Matrices for Repeat-Sales Price Indexes |
| Rsmlx | R Speaks 'Monolix' |
| RSNNS | Neural Networks using the Stuttgart Neural Network Simulator (SNNS) |
| rsnps | Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web |
| RSocrata | Download or Upload 'Socrata' Data Sets |
| rsoi | Import Various Northern and Southern Hemisphere Climate Indices |
| Rsolnp | General Non-Linear Optimization |
| rsolr | R to Solr Interface |
| rspa | Adapt Numerical Records to Fit (in)Equality Restrictions |
| rSPARCS | Sites, Population, and Records Cleaning Skills |
| rsparkling | R Interface for H2O Sparkling Water |
| rsparse | Statistical Learning on Sparse Matrices |
| Rspc | Nelson Rules for Control Charts |
| rSPDE | Rational Approximations of Fractional Stochastic Partial Differential Equations |
| RSpectra | Solvers for Large-Scale Eigenvalue and SVD Problems |
| RSpincalc | Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors |
| rspiro | Implementation of Spirometry Equations |
| Rspotify | Access to Spotify API |
| rsppfp | R's Shortest Path Problem with Forbidden Subpaths |
| rsprite2 | Identify Distributions that Match Reported Sample Parameters (SPRITE) |
| rsq | R-Squared and Related Measures |
| RSQL | Database Agnostic Package to Generate and Process 'SQL' Queries in R |
| RSQLite | SQLite Interface for R |
| rsqliteadmin | A GUI to Manage SQLite Databases |
| RSqlParser | Parse 'SQL' Statements |
| RsqMed | Total Mediation Effect Size Measure (R-Squared Measure) under Moderate or High-Dimensional Mediator Settings |
| Rssa | A Collection of Methods for Singular Spectrum Analysis |
| RSSampling | Ranked Set Sampling |
| RsSimulx | R Speaks 'Simulx' |
| RSSL | Implementations of Semi-Supervised Learning Approaches for Classification |
| RSSOP | Simulation of Supply Reservoir Systems using Standard Operation Policy |
| rstac | Client Library for SpatioTemporal Asset Catalog |
| rstack | Stack Data Type as an 'R6' Class |
| rstackdeque | Persistent Fast Amortized Stack and Queue Data Structures |
| rstan | R Interface to Stan |
| rstanarm | Bayesian Applied Regression Modeling via Stan |
| rstanemax | Emax Model Analysis with 'Stan' |
| rstantools | Tools for Developing R Packages Interfacing with 'Stan' |
| RStata | A Bit of Glue Between R and Stata |
| rstatix | Pipe-Friendly Framework for Basic Statistical Tests |
| rstatscn | R Interface for China National Data |
| Rstg | STG : Feature Selection using STochastic Gates |
| rstiefel | Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold |
| rstoat | R Interface to the 'STOAT' Platform |
| RStoolbox | Tools for Remote Sensing Data Analysis |
| RStorm | Simulate and Develop Streaming Processing |
| RstoxData | Tools to Read and Manipulate Fisheries Data |
| rstpm2 | Smooth Survival Models, Including Generalized Survival Models |
| rStrava | Access the 'Strava' API |
| rstream | Streams of Random Numbers |
| RStripe | A Convenience Interface for the Stripe Payment API |
| rstudio.prefs | Set 'RStudio' Preferences |
| rstudioapi | Safely Access the RStudio API |
| rsubgroup | Subgroup Discovery and Analytics |
| rsurface | Design of Rotatable Central Composite Experiments and Response Surface Analysis |
| Rsurrogate | Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information |
| RSurveillance | Design and Analysis of Disease Surveillance Activities |
| RSurvey | Geographic Information System Application |
| rsvd | Randomized Singular Value Decomposition |
| rsvddpd | Robust Singular Value Decomposition using Density Power Divergence |
| rsvg | Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or Bitmap Arrays |
| Rsymphony | SYMPHONY in R |
| rsyncrosim | The R Interface to 'SyncroSim' |
| rsyntax | Extract Semantic Relations from Text by Querying and Reshaping Syntax |
| rsyslog | Interface to the 'syslog' System Logger |
| rt | Interface to the 'Request Tracker' API |
| rt.test | Robustified t-Test |
| rt3 | Tic-Tac-Toe Package for R |
| rTableICC | Random Generation of Contingency Tables |
| rtables | Reporting Tables |
| Rtapas | Random Tanglegram Partitions |
| rtape | Manage and manipulate large collections of R objects stored as tape-like files |
| Rtauchen | Discretization of AR(1) Processes |
| RTaxometrics | Taxometric Analysis |
| RTCC | Detecting Trait Clustering in Environmental Gradients |
| rTCRBCRr | Repertoire Analysis of the Detected Clonotype |
| RTD | Simple TD API Client |
| RtD3 | Rt Visualization in D3 |
| RTDE | Robust Tail Dependence Estimation |
| rtdists | Response Time Distributions |
| rtematres | The rtematres API package |
| rtemps | R Templates for Reproducible Data Analyses |
| rTensor | Tools for Tensor Analysis and Decomposition |
| rTensor2 | MultiLinear Algebra |
| rTephra | Tephra Transport Modeling |
| rtern | A Ternary Conditional Operator for R |
| rtext | R6 Objects for Text and Data |
| RTextTools | Automatic Text Classification via Supervised Learning |
| rtf | Rich Text Format (RTF) Output |
| rTG | Methods to Analyse Seasonal Radial Tree Growth Data |
| rtgstat | Client for 'TGStat API' |
| Rthingsboard | 'ThingsBoard' API |
| rticles | Article Formats for R Markdown |
| rticulate | Ultrasound Tongue Imaging in R |
| rtiddlywiki | R Interface for 'TiddlyWiki' |
| rtide | Tide Heights |
| rties | Modeling Interpersonal Dynamics |
| RTIGER | HMM-Based Model for Genotyping and Cross-Over Identification |
| rtip | Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data |
| rtist | A Color Palette Generator |
| rtk | Rarefaction Tool Kit |
| rtkore | 'STK++' Core Library Integration to 'R' using 'Rcpp' |
| RTL | Risk Tool Library - Trading, Risk, 'Analytics' for Commodities |
| rTLS | Tools to Process Point Clouds Derived from Terrestrial Laser Scanning |
| rtmpt | Fitting RT-MPT Models |
| Rtnmin | Truncated Newton Function Minimization with Bounds Constraints |
| rtodoist | Create and Manage Todolist using 'Todoist.com' API |
| RTOMO | Visualization for Seismic Tomography |
| rtop | Interpolation of Data with Variable Spatial Support |
| rTorch | R Bindings to 'PyTorch' |
| Rtrack | Spatial Navigation Strategy Analysis |
| RTransferEntropy | Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy |
| rtrek | Datasets and Functions Relating to Star Trek |
| rtrend | Trend Estimating Tools |
| rtrends | Analyze Download Logs from the CRAN RStudio Mirror |
| RTriangle | Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator |
| rtrim | Trends and Indices for Monitoring Data |
| rTRNG | Advanced and Parallel Random Number Generation via 'TRNG' |
| Rtropical | Data Analysis Tools over Space of Phylogenetic Trees Using Tropical Geometry |
| rtry | Preprocessing Plant Trait Data |
| rts | Raster Time Series Analysis |
| rts2 | Real-Time Disease Surveillance |
| rtsdata | R Time Series Intelligent Data Storage |
| Rtsne | T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation |
| rtson | Typed JSON |
| rtsplot | Time Series Plot |
| rtsVis | Raster Time Series Visualization |
| Rttf2pt1 | 'ttf2pt1' Program |
| RTTWebClient | Web Client to 'TickTrader' |
| Rtwalk | The R Implementation of the 't-walk' MCMC Algorithm |
| rtweet | Collecting Twitter Data |
| rtype | A strong type system for R |
| rtypeform | Interface to 'typeform' Results |
| rubias | Bayesian Inference from the Conditional Genetic Stock Identification Model |
| rucm | Implementation of Unobserved Components Model (UCM) |
| rucrdtw | R Bindings for the UCR Suite |
| rugarch | Univariate GARCH Models |
| ruimtehol | Learn Text 'Embeddings' with 'Starspace' |
| ruin | Simulation of Various Risk Processes |
| ruler | Tidy Data Validation Reports |
| rules | Model Wrappers for Rule-Based Models |
| rUM | R Templates from the University of Miami |
| rumidas | Univariate GARCH-MIDAS, Double-Asymmetric GARCH-MIDAS and MEM-MIDAS |
| runcharter | Automatically Plot, Analyse and Revises Limits of Multiple Run Charts |
| runes | Convert Strings to Elder Futhark Runes |
| runexp | Softball Run Expectancy using Markov Chains and Simulation |
| RUnit | R Unit Test Framework |
| runjags | Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS |
| runner | Running Operations for Vectors |
| runonce | Run Once and Save Result |
| runstats | Fast Computation of Running Statistics for Time Series |
| Runuran | R Interface to the 'UNU.RAN' Random Variate Generators |
| rusda | Interface to USDA Databases |
| rusk | Beautiful Graphical Representation of Multiplication Tables on a Modular Circle |
| rust | Ratio-of-Uniforms Simulation with Transformation |
| ruta | Implementation of Unsupervised Neural Architectures |
| rutifier | Chilean Rol Unico Tributario |
| ruv | Detect and Remove Unwanted Variation using Negative Controls |
| RUVIIIC | RUV-III-C |
| rv | Simulation-Based Random Variable Objects |
| RVA | RNAseq Visualization Automation |
| RVAideMemoire | Testing and Plotting Procedures for Biostatistics |
| rvalues | R-Values for Ranking in High-Dimensional Settings |
| Rvcg | Manipulations of Triangular Meshes Based on the 'VCGLIB' API |
| rvcheck | R/Package Version Check |
| RVCompare | Compare Real Valued Random Variables |
| RVenn | Set Operations for Many Sets |
| RVerbalExpressions | Create Regular Expressions Easily |
| rversions | Query 'R' Versions, Including 'r-release' and 'r-oldrel' |
| rvertnet | Search 'Vertnet', a 'Database' of Vertebrate Specimen Records |
| rvest | Easily Harvest (Scrape) Web Pages |
| rvg | R Graphics Devices for Vector Graphics Output |
| rvHPDT | Calling Haplotype-Based and Variant-Based Pedigree Disequilibrium Test for Rare Variants in Pedigrees |
| RViennaCL | 'ViennaCL' C++ Header Files |
| rviewgraph | Animated Graph Layout Viewer |
| rvinecopulib | High Performance Algorithms for Vine Copula Modeling |
| RVIpkg | Regional Vulnerability Index |
| rvkstat | R Interface to API 'vk.com' |
| rvmethod | Radial Velocity Method for Detecting Exoplanets |
| Rvmmin | Variable Metric Nonlinear Function Minimization |
| Rvoterdistance | Calculates the Distance Between Voter and Multiple Polling Locations |
| RVowpalWabbit | R Interface to the Vowpal Wabbit |
| rwa | Perform a Relative Weights Analysis |
| rwalkr | API to Melbourne Pedestrian Data |
| Rwave | Time-Frequency Analysis of 1-D Signals |
| rwavelet | Wavelet Analysis |
| rwc | Random Walk Covariance Models |
| Rwclust | Random Walk Clustering on Weighted Graphs |
| RWDataPlyr | Read and Manipulate Data from 'RiverWare' |
| RweaveExtra | Sweave Drivers with Extra Tricks Up their Sleeve |
| rwebstat | Download Data from the Webstat API |
| RWeka | R/Weka Interface |
| RWekajars | R/Weka Interface Jars |
| rwfec | R Wireless, Forward Error Correction |
| rwhatsapp | Import and Handling for 'WhatsApp' Chat Logs |
| Rwhois | WHOIS Server Querying |
| rwicc | Regression with Interval-Censored Covariates |
| RWiener | Wiener Process Distribution Functions |
| RWildbook | Interface for the 'Wildbook' Wildlife Data Management Framework |
| rWind | Download, Edit and Include Wind and Sea Currents Data in Ecological and Evolutionary Analysis |
| RWinEdt | R Interface to 'WinEdt' |
| rWishart | Random Wishart Matrix Generation |
| RWmisc | Miscellaneous Spatial Functions |
| Rwofost | WOFOST Crop Growth Simulation Model |
| Rwordseg | Chinese Word Segmentation |
| rworldmap | Mapping Global Data |
| rworldxtra | Country boundaries at high resolution |
| RWsearch | Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One Download |
| rwstats | Chinese Character Frequency in Real World |
| rwt | 'Rice Wavelet Toolbox' Wrapper |
| Rwtss | Client for Web Time-Series Service |
| rwty | R We There Yet? Visualizing MCMC Convergence in Phylogenetics |
| rwunderground | R Interface to Weather Underground API |
| RxCEcolInf | 'R x C Ecological Inference With Optional Incorporation of Survey Information' |
| RXKCD | Get XKCD Comic from R |
| RXMCDA | Functions to Parse and Create XMCDA Files |
| RxnSim | Functions to Compute Chemical Reaction Similarity |
| RxODE | Facilities for Simulating from ODE-Based Models |
| rxode2 | Facilities for Simulating from ODE-Based Models |
| rxSeq | Combined Total and Allele Specific Reads Sequencing Study |
| RXshrink | Maximum Likelihood Shrinkage using Generalized Ridge or Least Angle Regression |
| rxylib | Import XY-Data into R |
| Ryacas | R Interface to the 'Yacas' Computer Algebra System |
| Ryacas0 | Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System) |
| ryandexdirect | Load Data From 'Yandex Direct' |
| RYandexTranslate | R Interface to Yandex Translate API |
| rym | R Interface to Yandex Metrica API |
| ryouready | Companion to the Forthcoming Book - R you Ready? |
| rYoutheria | Access to the YouTheria Mammal Trait Database |
| rytstat | Work with 'YouTube API' |
| RZabbix | R Module for Working with the 'Zabbix API' |
| rzentra | Client for the 'ZENTRA Cloud' API |
| RZigZag | Zig-Zag Sampler |
| rzmq | R Bindings for 'ZeroMQ' |
| RZooRoH | Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes |
| s2 | Spherical Geometry Operators Using the S2 Geometry Library |
| s20x | Functions for University of Auckland Course STATS 201/208 Data Analysis |
| s2dv | A Set of Common Tools for Seasonal to Decadal Verification |
| s2dverification | Set of Common Tools for Forecast Verification |
| s2net | The Generalized Semi-Supervised Elastic-Net |
| s3.resourcer | S3 Resource Resolver |
| s4vd | Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection |
| saasCNV | Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data |
| sabarsi | Background Removal and Spectrum Identification for SERS Data |
| sabre | Spatial Association Between Regionalizations |
| sac | Semiparametric Analysis of Change-Point |
| SACCR | SA Counterparty Credit Risk under CRR2 |
| SACOBRA | Self-Adjusting COBRA |
| sad | Verify the Scale, Anisotropy and Direction of Weather Forecasts |
| SADEG | Stability Analysis in Differentially Expressed Genes |
| SADISA | Species Abundance Distributions with Independent-Species Assumption |
| sadists | Some Additional Distributions |
| sads | Maximum Likelihood Models for Species Abundance Distributions |
| sae | Small Area Estimation |
| sae.prop | Small Area Estimation using Fay-Herriot Models with Additive Logistic Transformation |
| saeBest | Selecting Auxiliary Variables in Small Area Estimation (SAE) Model |
| saeeb | Small Area Estimation for Count Data |
| saeHB | Small Area Estimation using Hierarchical Bayesian Method |
| saeHB.gpois | SAE using HB Method under Generalized Poisson Distribution |
| saeHB.hnb | Small Area Estimation under Hurdle Negative Binomial Distribution using Hierarchical Bayesian Method |
| saeHB.ME | Small Area Estimation with Measurement Error using Hierarchical Bayesian Method |
| saeHB.panel | Small Area Estimation using Hierarchical Bayesian Method for Rao Yu Model |
| saeHB.spatial | Small Area Estimation under Spatial SAR Model using Hierarchical Bayesian Method |
| saeHB.twofold | Hierarchical Bayes Twofold Subarea Level Model SAE |
| saeHB.ZIB | Small Area Estimation using Hierarchical Bayesian under Zero Inflated Binomial Distribution |
| saeHB.zinb | Small Area Estimation using Hierarchical Bayesian under Zero Inflated Negative Binomial Distribution |
| saekernel | Small Area Estimation Non-Parametric Based Nadaraya-Watson Kernel |
| saeME | Small Area Estimation with Measurement Error |
| saemix | Stochastic Approximation Expectation Maximization (SAEM) Algorithm |
| saeMSPE | Compute MSPE Estimates for the Fay Herriot Model and Nested Error Regression Model |
| saeRobust | Robust Small Area Estimation |
| saeSim | Simulation Tools for Small Area Estimation |
| saeTrafo | Transformations for Unit-Level Small Area Models |
| SAEval | Small Area Estimation Evaluation |
| SAFARI | Shape Analysis for AI-Reconstructed Images |
| SAFD | Statistical Analysis of Fuzzy Data |
| safedata | Interface to Data from the SAFE Project |
| safejoin | Perform "Safe" Table Joins |
| safer | Encrypt and Decrypt Strings, R Objects and Files |
| safestats | Safe Anytime-Valid Inference |
| safetyCharts | Charts for Monitoring Clinical Trial Safety |
| safetyData | Clinical Trial Data |
| safetyGraphics | Interactive Graphics for Monitoring Clinical Trial Safety |
| sageR | Applied Statistics for Economics and Management with R |
| SAGMM | Clustering via Stochastic Approximation and Gaussian Mixture Models |
| sahpm | Variable Selection using Simulated Annealing |
| sAIC | Akaike Information Criterion for Sparse Estimation |
| SailoR | An Extension of the Taylor Diagram to Two-Dimensional Vector Data |
| SALES | Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms |
| salesforcer | An Implementation of 'Salesforce' APIs Using Tidy Principles |
| salso | Search Algorithms and Loss Functions for Bayesian Clustering |
| SALTSampler | Efficient Sampling on the Simplex |
| salty | Turn Clean Data into Messy Data |
| SAM | Sparse Additive Modelling |
| SAMBA | Selection and Misclassification Bias Adjustment for Logistic Regression Models |
| sambia | A Collection of Techniques Correcting for Sample Selection Bias |
| samc | Spatial Absorbing Markov Chains |
| SAMGEP | A Semi-Supervised Method for Prediction of Phenotype Event Times |
| SAMM | Some Algorithms for Mixed Models |
| samon | Sensitivity Analysis for Missing Data |
| Sample.Size | Sample size calculation |
| sampler | Sample Design, Drawing & Data Analysis Using Data Frames |
| SamplerCompare | A Framework for Comparing the Performance of MCMC Samplers |
| sampleSelection | Sample Selection Models |
| samplesize | Sample Size Calculation for Various t-Tests and Wilcoxon-Test |
| SampleSize4ClinicalTrials | Sample Size Calculation for the Comparison of Means or Proportions in Phase III Clinical Trials |
| samplesize4surveys | Sample Size Calculations for Complex Surveys |
| samplesizeCMH | Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test |
| samplesizelogisticcasecontrol | Sample Size and Power Calculations for Case-Control Studies |
| sampleVADIR | Draw Stratified Samples from the VADIR Database |
| sampling | Survey Sampling |
| SamplingBigData | Sampling Methods for Big Data |
| samplingbook | Survey Sampling Procedures |
| samplingDataCRT | Sampling Data Within Different Study Designs for Cluster Randomized Trials |
| samplingEstimates | Sampling Estimates |
| SamplingStrata | Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys |
| samplingVarEst | Sampling Variance Estimation |
| sampsizeval | Sample Size for Validation of Risk Models with Binary Outcomes |
| samr | SAM: Significance Analysis of Microarrays |
| sams | Merge-Split Samplers for Conjugate Bayesian Nonparametric Models |
| SAMtool | Stock Assessment Methods Toolkit |
| SAMTx | Sensitivity Assessment to Unmeasured Confounding with Multiple Treatments |
| samurais | Statistical Models for the Unsupervised Segmentation of Time-Series ('SaMUraiS') |
| sand | Statistical Analysis of Network Data with R, 2nd Edition |
| sandbox | Probabilistic Numerical Modelling of Sediment Properties |
| sandwich | Robust Covariance Matrix Estimators |
| sandwichr | Spatial Interpolation Based on Spatial Stratified Heterogeneity |
| SanFranBeachWater | Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data |
| SangerTools | Tools for Population Health Management Analytics |
| sanic | Solving Ax = b Nimbly in C++ |
| sanitizers | C/C++ source code to trigger Address and Undefined Behaviour Sanitizers |
| sanityTracker | Keeps Track of all Performed Sanity Checks |
| sankey | Illustrate the Flow of Information or Material |
| sankeywheel | Create Dependency Wheels and Sankey Diagrams |
| sanon | Stratified Analysis with Nonparametric Covariable Adjustment |
| santaR | Short Asynchronous Time-Series Analysis |
| santoku | A Versatile Cutting Tool |
| sanzo | Color Palettes Based on the Works of Sanzo Wada |
| saotd | Sentiment Analysis of Twitter Data |
| sapevom | Group Ordinal Method for Multiple Criteria Decision-Making |
| sapfluxnetr | Working with 'Sapfluxnet' Project Data |
| SAPP | Statistical Analysis of Point Processes |
| saqgetr | Import Air Quality Monitoring Data in a Fast and Easy Way |
| SAR | Smart Adaptive Recommendations |
| sara4r | An R-GUI for Spatial Analysis of Surface Runoff using the NRCS-CN Method |
| sarima | Simulation and Prediction with Seasonal ARIMA Models |
| SARP.compo | Network-Based Interpretation of Changes in Compositional Data |
| SARP.moodle | XML Output Functions for Easy Creation of Moodle Questions |
| sarp.snowprofile | Snow Profile Analysis for Snowpack and Avalanche Research |
| sarp.snowprofile.alignment | Snow Profile Alignment, Aggregation, and Clustering |
| sars | Fit and Compare Species-Area Relationship Models Using Multimodel Inference |
| sarsop | Approximate POMDP Planning Software |
| sas7bdat | sas7bdat Reverse Engineering Documentation |
| SAScii | Import ASCII Files Directly into R using Only a 'SAS' Input Script |
| sasfunclust | Sparse and Smooth Functional Clustering |
| sasLM | 'SAS' Linear Model |
| sasMap | Static 'SAS' Code Analysis |
| SASmarkdown | 'SAS' Markdown |
| SASmixed | Data sets from "SAS System for Mixed Models" |
| sass | Syntactically Awesome Style Sheets ('Sass') |
| sassy | Makes 'R' Easier for Everyone |
| sate | Scientific Analysis of Trial Errors (SATE) |
| satellite | Handling and Manipulating Remote Sensing Data |
| satin | Visualisation and Analysis of Ocean Data Derived from Satellites |
| satscanMapper | 'SaTScan' (TM) Results Mapper |
| saturnin | Spanning Trees Used for Network Inference |
| SAutomata | Inference and Learning in Stochastic Automata |
| SAVER | Single-Cell RNA-Seq Gene Expression Recovery |
| savonliquide | Accessibility Toolbox for 'R' Users |
| sawnuti | Comparing Sequences with Non-Uniform Time Intervals |
| saws | Small-Sample Adjustments for Wald Tests Using Sandwich Estimators |
| sazedR | Parameter-Free Domain-Agnostic Season Length Detection in Time Series |
| SBAGM | Search Best ARIMA, GARCH, and MS-GARCH Model |
| SBdecomp | Estimation of the Proportion of SB Explained by Confounders |
| sbfc | Selective Bayesian Forest Classifier |
| sbgcop | Semiparametric Bayesian Gaussian Copula Estimation and Imputation |
| sBIC | Computing the Singular BIC for Multiple Models |
| SBICgraph | Structural Bayesian Information Criterion for Graphical Models |
| sbioPN | sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets |
| sbl | Sparse Bayesian Learning for QTL Mapping and Genome-Wide Association Studies |
| sbm | Stochastic Blockmodels |
| SBmedian | Scalable Bayes with Median of Subset Posteriors |
| sbmSDP | Semidefinite Programming for Fitting Block Models of Equal Block Sizes |
| SBMSplitMerge | Inference for a Generalised SBM with a Split Merge Sampler |
| SBN | Generate Stochastic Branching Networks |
| sbo | Text Prediction via Stupid Back-Off N-Gram Models |
| sboost | Machine Learning with AdaBoost on Decision Stumps |
| SBRect | Detecting structural breaks using rectangle covering (non-parametric method) |
| SBSDiff | Satorra-Bentler Scaled Chi-Squared Difference Test |
| sbtools | USGS ScienceBase Tools |
| sbw | Stable Balancing Weights for Causal Inference and Missing Data |
| SC.MEB | Spatial Clustering with Hidden Markov Random Field using Empirical Bayes |
| SC2API | Blizzard SC2 API Wrapper |
| scaffolder | Scaffolding Interfaces to Packages in Other Programming Languages |
| scagnostics | Compute scagnostics - scatterplot diagnostics |
| scaleAlign | Scale Alignment for Between-Items Multidimensional Rasch Family Models |
| scaleboot | Approximately Unbiased P-Values via Multiscale Bootstrap |
| Scalelink | Create Scale Linkage Scores |
| scales | Scale Functions for Visualization |
| ScaleSpikeSlab | Scalable Spike-and-Slab |
| scalpel | Processes Calcium Imaging Data |
| scalreg | Scaled Sparse Linear Regression |
| scam | Shape Constrained Additive Models |
| scan | Single-Case Data Analyses for Single and Multiple Baseline Designs |
| scAnnotate | An Automated Cell Type Annotation Tool for Single-Cell RNA-Sequencing Data |
| scape | Statistical Catch-at-Age Plotting Environment |
| scapesClassification | User-Defined Classification of Raster Surfaces |
| scapGNN | Graph Neural Network-Based Framework for Single Cell Active Pathways and Gene Modules Analysis |
| scar | Shape-Constrained Additive Regression: a Maximum Likelihood Approach |
| scaRabee | Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models |
| SCAT | Summary Based Conditional Association Test |
| scatr | Create Scatter Plots with Marginal Density or Box Plots |
| scatterD3 | D3 JavaScript Scatterplot from R |
| scattermore | Scatterplots with More Points |
| scatterpie | Scatter Pie Plot |
| scatterplot3d | 3D Scatter Plot |
| scatterPlotMatrix | 'Htmlwidget' for a Scatter Plot Matrix |
| SCBiclust | Identifies Mean, Variance, and Hierarchically Clustered Biclusters |
| scBio | Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data |
| SCBmeanfd | Simultaneous Confidence Bands for the Mean of Functional Data |
| scbursts | Single Channel Bursts Analysis |
| scCAN | Single-Cell Clustering using Autoencoder and Network Fusion |
| scCATCH | Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity |
| SCCI | Stochastic Complexity-Based Conditional Independence Test for Discrete Data |
| scclust | Size-Constrained Clustering |
| sccore | Core Utilities for Single-Cell RNA-Seq |
| sccr | The Self-Consistent, Competing Risks (SC-CR) Algorithms |
| SCCS | The Self-Controlled Case Series Method |
| scdensity | Shape-Constrained Kernel Density Estimation |
| scDHA | Single-Cell Decomposition using Hierarchical Autoencoder |
| scdhlm | Estimating Hierarchical Linear Models for Single-Case Designs |
| scDiffCom | Differential Analysis of Intercellular Communication from scRNA-Seq Data |
| scDIFtest | Item-Wise Score-Based DIF Detection |
| SCEM | Splitting-Coalescence-Estimation Method |
| SCEnt | Single Cell Entropy Analysis of Gene Heterogeneity in Cell Populations |
| SCEPtER | Stellar CharactEristics Pisa Estimation gRid |
| SCEPtERbinary | Stellar CharactEristics Pisa Estimation gRid for Binary Systems |
| SCGLR | Supervised Component Generalized Linear Regression |
| scgwr | Scalable Geographically Weighted Regression |
| schemr | Convert Images to Usable Color Schemes |
| schoenberg | Tools for 12-Tone Musical Composition |
| scholar | Analyse Citation Data from Google Scholar |
| schoolmath | Functions and Datasets for Math Used in School |
| schoRsch | Tools for Analyzing Factorial Experiments |
| schrute | The Entire Transcript from the Office in Tidy Format |
| schtools | Schloss Lab Tools for Reproducible Microbiome Research |
| schumaker | Schumaker Shape-Preserving Spline |
| SCI | Standardized Climate Indices Such as SPI, SRI or SPEI |
| SCIBER | Single-Cell Integrator and Batch Effect Remover |
| scico | Colour Palettes Based on the Scientific Colour-Maps |
| scidesignR | Data Sets from Design and Analysis of Experiments and Observational Studies using R |
| scientoText | Text & Scientometric Analytics |
| scifigure | Visualize 'Reproducibility' and 'Replicability' in a Comparison of Scientific Studies |
| scImmuneGraph | Visualize the Basic Characteristics of Single-Cell Immune Repertoire |
| SCINA | A Semi-Supervised Category Identification and Assignment Tool |
| scINSIGHT | Interpretation of Heterogeneous Single-Cell Gene Expression Data |
| sciplot | Scientific Graphing Functions for Factorial Designs |
| scipub | Summarize Data for Scientific Publication |
| sciRmdTheme | Upgraded 'Rmarkdown' Themes for Scientific Writing |
| scISR | Single-Cell Imputation using Subspace Regression |
| scITD | Single-Cell Interpretable Tensor Decomposition |
| SciViews | SciViews - Main package |
| scLink | Inferring Functional Gene Co-Expression Networks from Single Cell Data |
| sclr | Scaled Logistic Regression |
| sClust | R Toolbox for Unsupervised Spectral Clustering |
| SCMA | Single-Case Meta-Analysis |
| scMappR | Single Cell Mapper |
| scModels | Fitting Discrete Distribution Models to Count Data |
| scOntoMatch | Aligning Ontology Annotation Across Single Cell Datasets with 'scOntoMatch' |
| scoper | Spectral Clustering-Based Method for Identifying B Cell Clones |
| scopr | Read Ethoscope Data |
| SCOR | Spherically Constrained Optimization Routine |
| score | A Package to Score Behavioral Questionnaires |
| scorecard | Credit Risk Scorecard |
| scorecardModelUtils | Credit Scorecard Modelling Utils |
| ScoreEB | Score Test Integrated with Empirical Bayes for Association Study |
| scorepeak | Peak Functions for Peak Detection in Univariate Time Series |
| ScorePlus | Implementation of SCORE, SCORE+ and Mixed-SCORE |
| scoring | Proper Scoring Rules |
| scoringRules | Scoring Rules for Parametric and Simulated Distribution Forecasts |
| scoringTools | Credit Scoring Tools |
| scoringutils | Utilities for Scoring and Assessing Predictions |
| SCORNET | Semi-Supervised Calibration of Risk with Noisy Event Times |
| SCORPIUS | Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data |
| ScottKnott | The ScottKnott Clustering Algorithm |
| ScottKnottESD | The Scott-Knott Effect Size Difference (ESD) Test |
| scout | Implements the Scout Method for Covariance-Regularized Regression |
| SCOUTer | Simulate Controlled Outliers |
| SCperf | Functions for Planning and Managing Inventories in a Supply Chain |
| scpi | Prediction Intervals for Synthetic Control Methods |
| scPOP | Metrics for Benchmarking scRNA-Seq Batch Correction |
| scqe | Stability Controlled Quasi-Experimentation |
| scquantum | Estimate Ploidy and Absolute Copy Number from Single Cell Sequencing |
| scraEP | Scrape the Web with Extra Power |
| scrappy | A Simple Web Scraper |
| ScreenClean | Screen and clean variable selection procedures |
| scrime | Analysis of High-Dimensional Categorical Data Such as SNP Data |
| SCRIP | An Accurate Simulator for Single-Cell RNA Sequencing Data |
| scriptexec | Execute Native Scripts |
| ScriptMapR | R Script Visualization in Cytoscape |
| scriptName | Determine a Script's Filename from Within the Script Itself |
| scriptuRs | Complete Text of the LDS Scriptures |
| scrm | Simulating the Evolution of Biological Sequences |
| scRNAstat | A Pipeline to Process Single Cell RNAseq Data |
| scRNAtools | Single Cell RNA Sequencing Data Analysis Tools |
| scrobbler | Download 'Scrobbles' from 'Last.fm' |
| scrollrevealR | Animate 'shiny' Elements when They Scroll into View using the 'scrollrevealjs' Library |
| SCRSELECT | Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model |
| SCRT | Single-Case Randomization Tests |
| scrypt | Key Derivation Functions for R Based on Scrypt |
| scryr | An Interface to the 'Scryfall' API |
| scs | Splitting Conic Solver |
| scSorter | Implementation of 'scSorter' Algorithm |
| scTenifoldKnk | In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks |
| scTenifoldNet | Construct and Compare scGRN from Single-Cell Transcriptomic Data |
| SCtools | Extensions for Synthetic Controls Analysis |
| sctransform | Variance Stabilizing Transformations for Single Cell UMI Data |
| scuba | Diving Calculations and Decompression Models |
| scUtils | Utility Functions for Single-Cell RNA Sequencing Data |
| scutr | Balancing Multiclass Datasets for Classification Tasks |
| SCVA | Single-Case Visual Analysis |
| sda | Shrinkage Discriminant Analysis and CAT Score Variable Selection |
| SDaA | Sampling: Design and Analysis |
| sdafilter | Symmetrized Data Aggregation |
| sdamr | Statistics: Data Analysis and Modelling |
| SDAR | Stratigraphic Data Analysis |
| SDAResources | Datasets and Functions for 'Sampling: Design and Analysis, 3rd Edition' |
| sdcHierarchies | Create and (Interactively) Modify Nested Hierarchies |
| sdcLog | Tools for Statistical Disclosure Control in Research Data Centers |
| sdcMicro | Statistical Disclosure Control Methods for Anonymization of Data and Risk Estimation |
| SDCNway | Tools to Evaluate Disclosure Risk |
| sdcSpatial | Statistical Disclosure Control for Spatial Data |
| sdcTable | Methods for Statistical Disclosure Control in Tabular Data |
| sde | Simulation and Inference for Stochastic Differential Equations |
| sdef | Synthesizing List of Differentially Expressed Features |
| SDEFSR | Subgroup Discovery with Evolutionary Fuzzy Systems |
| sdetorus | Statistical Tools for Toroidal Diffusions |
| SDLfilter | Filtering and Assessing the Sample Size of Tracking Data |
| sdm | Species Distribution Modelling |
| sdmApp | A User-Friendly Application for Species Distribution Modeling |
| SDMPlay | Species Distribution Modelling Playground |
| sdmpredictors | Species Distribution Modelling Predictor Datasets |
| SDMtune | Species Distribution Model Selection |
| sdmvspecies | Create Virtual Species for Species Distribution Modelling |
| sdpdth | M-Estimator for Threshold Spatial Dynamic Panel Data Model |
| sdPrior | Scale-Dependent Hyperpriors in Structured Additive Distributional Regression |
| sdprisk | Measures of Risk for the Compound Poisson Risk Process with Diffusion |
| sdpt3r | Semi-Definite Quadratic Linear Programming Solver |
| sdStaf | Species Distribution and Stability Future Models |
| SDT | Self-Determination Theory Measures |
| sdwd | Sparse Distance Weighted Discrimination |
| SE.EQ | SE-Test for Equivalence |
| SEA | Segregation Analysis |
| seacarb | Seawater Carbonate Chemistry |
| SEAGLE | Scalable Exact Algorithm for Large-Scale Set-Based Gene-Environment Interaction Tests |
| seagull | Lasso, Group Lasso, and Sparse-Group Lasso for Mixed Models |
| sealasso | Standard Error Adjusted Adaptive Lasso |
| searchConsoleR | Google Search Console R Client |
| searcher | Query Search Interfaces |
| SearchTrees | Spatial Search Trees |
| seas | Seasonal Analysis and Graphics, Especially for Climatology |
| season | Seasonal Analysis of Health Data |
| seasonal | R Interface to X-13-ARIMA-SEATS |
| seasonalclumped | Toolbox for Clumped Isotope Seasonality Reconstructions |
| seasonalityPlot | Seasonality Variation Plots of Stock Prices and Cryptocurrencies |
| seasonalview | Graphical User Interface for Seasonal Adjustment |
| seastests | Seasonality Tests |
| seawaveQ | SEAWAVE-Q Model |
| SecDim | The Second Dimension of Spatial Association |
| SECFISH | Disaggregate Variable Costs |
| SecKW | The SecKW Distribution |
| SECP | Statistical Estimation of Cluster Parameters |
| secr | Spatially Explicit Capture-Recapture |
| secrdesign | Sampling Design for Spatially Explicit Capture-Recapture |
| secret | Share Sensitive Information in R Packages |
| secrettext | Encrypt Text Using a Shifting Substitution Cipher |
| secrlinear | Spatially Explicit Capture-Recapture for Linear Habitats |
| secsse | Several Examined and Concealed States-Dependent Speciation and Extinction |
| secure | Sequential Co-Sparse Factor Regression |
| secuTrialR | Handling of Data from the Clinical Data Management System 'secuTrial' |
| sedproxy | Simulation of Sediment Archived Climate Proxy Records |
| see | Model Visualisation Toolbox for 'easystats' and 'ggplot2' |
| seeclickfixr | Access Data from the SeeClickFix Web API |
| seecolor | View Colors Used in R Objects in the Console |
| SeedCalc | Seed Germination and Seedling Growth Indexes |
| seedCCA | Seeded Canonical Correlation Analysis |
| seededlda | Seeded-LDA for Topic Modeling |
| seedr | Hydro and Thermal Time Seed Germination Models in R |
| seedreg | Regression Analysis for Seed Germination as a Function of Temperature |
| seeds | Estimate Hidden Inputs using the Dynamic Elastic Net |
| seeker | Simplified Fetching and Processing of Microarray and RNA-Seq Data |
| seer | Feature-Based Forecast Model Selection |
| SEERaBomb | SEER and Atomic Bomb Survivor Data Analysis Tools |
| SeerMapper | A Quick Way to Map U.S. Rates and Data of U.S. States, Counties, Census Tracts, or Seer Registries using 2000 and 2010 U.S. Census Boundaries |
| SeerMapper2010East | Supplemental U.S. 2010 Census Tract Boundaries for 20 Eastern States (including DC and PR) without Registries for 'SeerMapper' |
| SeerMapper2010Regs | Supplemental U.S. 2010 Census Tract Boundaries for 19 States with Seer Registries for 'SeerMapper' |
| SeerMapper2010West | Supplemental U.S. 2010 Census Tract Boundaries for 13 Western States without Seer Registries for 'SeerMapper' |
| SeerMapperEast | Supplemental U.S. 2000 Census Tract Boundaries for 20 States, District and Territory without Seer Registries that are East of the Mississippi River for Use with 'SeerMapper' Package |
| SeerMapperRegs | Supplemental U.S. 2000 Census Tract Boundaries for 19 States with Seer Registries for 'SeerMapper' |
| SeerMapperWest | Supplemental U.S. 2000 Census Tract Boundaries for 13 Western States without Seer Registries for 'SeerMapper' |
| seewave | Sound Analysis and Synthesis |
| seg | Measuring Spatial Segregation |
| segclust2d | Bivariate Segmentation/Clustering Methods and Tools |
| SegCorr | Detecting Correlated Genomic Regions |
| segen | Sequence Generalization Through Similarity Network |
| SegEnvIneq | Environmental Inequality Indices Based on Segregation Measures |
| segmag | Determine Event Boundaries in Event Segmentation Experiments |
| segmented | Regression Models with Break-Points / Change-Points (with Possibly Random Effects) Estimation |
| segmenTier | Similarity-Based Segmentation of Multidimensional Signals |
| segmentr | Segment Data With Maximum Likelihood |
| segmetric | Metrics for Assessing Segmentation Accuracy for Geospatial Data |
| segMGarch | Multiple Change-Point Detection for High-Dimensional GARCH Processes |
| segRDA | Modeling Non-Continuous Linear Responses of Ecological Data |
| segregation | Entropy-Based Segregation Indices |
| segregatr | Segregation Analysis for Variant Interpretation |
| sehrnett | A Very Nice Interface to 'WordNet' |
| SEIRfansy | Extended Susceptible-Exposed-Infected-Recovery Model |
| seismic | Predict Information Cascade by Self-Exciting Point Process |
| seismicRoll | Fast Rolling Functions for Seismology using 'Rcpp' |
| sejmRP | An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office |
| Sejong | KoNLP static dictionaries and Sejong project resources |
| SEL | Semiparametric Elicitation |
| selcorr | Post-Selection Inference for Generalized Linear Models |
| Select | Determines Species Probabilities Based on Functional Traits |
| selectapref | Analysis of Field and Laboratory Foraging |
| SelectBoost | A General Algorithm to Enhance the Performance of Variable Selection Methods in Correlated Datasets |
| selection.index | Analysis of Selection Index in Plant Breeding |
| selectiongain | A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection |
| selectiveInference | Tools for Post-Selection Inference |
| selectMeta | Estimation of Weight Functions in Meta Analysis |
| selectr | Translate CSS Selectors to XPath Expressions |
| selectspm | Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit |
| SeleMix | Selective Editing via Mixture Models |
| seleniumPipes | R Client Implementing the W3C WebDriver Specification |
| SELF | A Structural Equation Embedded Likelihood Framework for Causal Discovery |
| selfingTree | Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing |
| SelvarMix | Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis |
| sem | Structural Equation Models |
| semantic.dashboard | Dashboard with Fomantic UI Support for Shiny |
| Semblance | A Data-Driven Similarity Kernel on Probability Spaces |
| semdrw | 'SEM Shiny' |
| semds | Structural Equation Multidimensional Scaling |
| semEff | Automatic Calculation of Effects for Piecewise Structural Equation Models |
| semgram | Extracting Semantic Motifs from Textual Data |
| SEMgraph | Network Analysis and Causal Inference Through Structural Equation Modeling |
| semiArtificial | Generator of Semi-Artificial Data |
| semicmprskcoxmsm | Use Inverse Probability Weighting to Estimate Treatment Effect for Semi Competing Risks Data |
| SemiCompRisks | Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data |
| SEMID | Identifiability of Linear Structural Equation Models |
| SemiEstimate | Solve Semi-Parametric Estimation by Implicit Profiling |
| SemiMarkov | Multi-States Semi-Markov Models |
| seminr | Building and Estimating Structural Equation Models |
| SemiPar | Semiparametic Regression |
| semmcmc | Bayesian Structural Equation Modeling in Multiple Omics Data Integration |
| SemNeT | Methods and Measures for Semantic Network Analysis |
| SemNetCleaner | An Automated Cleaning Tool for Semantic and Linguistic Data |
| SemNetDictionaries | Dictionaries for the 'SemNetCleaner' Package |
| semnova | Latent Repeated Measures ANOVA |
| semPlot | Path Diagrams and Visual Analysis of Various SEM Packages' Output |
| semPower | Power Analyses for SEM |
| semptools | Customizing Structural Equation Modelling Plots |
| SEMsens | A Tool for Sensitivity Analysis in Structural Equation Modeling |
| semsfa | Semiparametric Estimation of Stochastic Frontier Models |
| semTable | Structural Equation Modeling Tables |
| semTools | Useful Tools for Structural Equation Modeling |
| semtree | Recursive Partitioning for Structural Equation Models |
| semver | 'Semantic Versioning V2.0.0' Parser |
| semverutils | Semantic Version Utilities |
| sen2r | Find, Download and Process Sentinel-2 Data |
| sendgridr | Mail Sender Using 'Sendgrid' Service |
| sendmailR | Send Email using R |
| sense | Automatic Stacked Ensemble for Regression Tasks |
| sensemakr | Sensitivity Analysis Tools for Regression Models |
| sensibo.sky | Access to 'Sensibo Sky' API V2 for Air Conditioners Remote Control |
| sensiPhy | Sensitivity Analysis for Comparative Methods |
| sensitivity | Global Sensitivity Analysis of Model Outputs |
| sensitivity2x2xk | Sensitivity Analysis for 2x2xk Tables in Observational Studies |
| sensitivityCalibration | A Calibrated Sensitivity Analysis for Matched Observational Studies |
| SensitivityCaseControl | Sensitivity Analysis for Case-Control Studies |
| sensitivityfull | Sensitivity Analysis for Full Matching in Observational Studies |
| sensitivitymult | Sensitivity Analysis for Observational Studies with Multiple Outcomes |
| sensitivitymv | Sensitivity Analysis in Observational Studies |
| sensitivitymw | Sensitivity Analysis for Observational Studies Using Weighted M-Statistics |
| SensMap | Sensory and Consumer Data Mapping |
| sensmediation | Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects |
| sensobol | Computation of Variance-Based Sensitivity Indices |
| SensoMineR | Sensory Data Analysis |
| sensory | Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm |
| SenSrivastava | Datasets from Sen & Srivastava |
| senstrat | Sensitivity Analysis for Stratified Observational Studies |
| SensusR | Sensus Analytics |
| sentencepiece | Text Tokenization using Byte Pair Encoding and Unigram Modelling |
| sentiment.ai | Simple Sentiment Analysis Using Deep Learning |
| SentimentAnalysis | Dictionary-Based Sentiment Analysis |
| sentimentr | Calculate Text Polarity Sentiment |
| SenTinMixt | Parsimonious Mixtures of MSEN and MTIN Distributions |
| sentometrics | An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction |
| sentopics | Tools for Joint Sentiment and Topic Analysis of Textual Data |
| sentryR | Send Errors and Messages to 'Sentry' |
| SEofM | Standard Error of Measurement |
| sEparaTe | Maximum Likelihood Estimation and Likelihood Ratio Test Functions for Separable Variance-Covariance Structures |
| separationplot | Separation Plots |
| seplyr | Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks |
| SeqAlloc | Sequential Allocation for Prospective Experiments |
| seqCBS | Copy Number Profiling using Sequencing and CBS |
| seqDesign | Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints |
| SeqDetect | Sequence and Latent Process Detector |
| seqest | Sequential Method for Classification and Generalized Estimating Equations Problem |
| SeqExpMatch | Sequential Experimental Design via Matching on-the-Fly |
| SeqFeatR | A Tool to Associate FASTA Sequences and Features |
| seqgendiff | RNA-Seq Generation/Modification for Simulation |
| seqhandbook | Miscellaneous Tools for Sequence Analysis |
| seqHMM | Mixture Hidden Markov Models for Social Sequence Data and Other Multivariate, Multichannel Categorical Time Series |
| seqICP | Sequential Invariant Causal Prediction |
| seqinr | Biological Sequences Retrieval and Analysis |
| SeqKat | Detection of Kataegis |
| SeqMADE | Network Module-Based Model in the Differential Expression Analysis for RNA-Seq |
| seqmagick | Sequence Manipulation Utilities |
| seqminer | Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
| seqmon | Group Sequential Design Class for Clinical Trials |
| SeqNet | Generate RNA-Seq Data from Gene-Gene Association Networks |
| seqtest | Sequential Triangular Test |
| sequences | Generic and Biological Sequences |
| SequenceSpikeSlab | Exact Bayesian Model Selection Methods for the Sparse Normal Sequence Model |
| Sequential | Exact Sequential Analysis for Poisson and Binomial Data |
| SequentialDesign | Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data |
| sequenza | Copy Number Estimation from Tumor Genome Sequencing Data |
| sergeant | Tools to Transform and Query Data with Apache Drill |
| serial | The Serial Interface Package |
| seriation | Infrastructure for Ordering Objects Using Seriation |
| serieslcb | Lower Confidence Bounds for Binomial Series System |
| serp | Smooth Effects on Response Penalty for CLM |
| serpstatr | 'Serpstat' API Wrapper |
| serrsBayes | Bayesian Modelling of Raman Spectroscopy |
| servosphereR | Analyze Data Generated from Syntech Servosphere Trials |
| servr | A Simple HTTP Server to Serve Static Files or Dynamic Documents |
| sesem | Spatially Explicit Structural Equation Modeling |
| SEset | Computing Statistically-Equivalent Path Models |
| sessioninfo | R Session Information |
| set | Set Operation |
| set6 | R6 Mathematical Sets Interface |
| SetMethods | Functions for Set-Theoretic Multi-Method Research and Advanced QCA |
| SetRank | Advanced Gene Set Enrichment Analysis |
| setRNG | Set (Normal) Random Number Generator and Seed |
| sets | Sets, Generalized Sets, Customizable Sets and Intervals |
| setter | Mutators that Work with Pipes |
| SetTest | Group Testing Procedures for Signal Detection and Goodness-of-Fit |
| settings | Software Option Settings Manager for R |
| Seurat | Tools for Single Cell Genomics |
| SeuratObject | Data Structures for Single Cell Data |
| sever | Customise 'Shiny' Disconnected Screens and Error Messages |
| sf | Simple Features for R |
| sfadv | Advanced Methods for Stochastic Frontier Analysis |
| sfaR | Stochastic Frontier Analysis using R |
| sfarrow | Read/Write Simple Feature Objects ('sf') with 'Apache' 'Arrow' |
| sfc | Substance Flow Computation |
| sfcr | Simulate Stock-Flow Consistent Models |
| sfdct | Constrained Triangulation for Simple Features |
| sfdep | Spatial Dependence for Simple Features |
| sFFLHD | Sequential Full Factorial-Based Latin Hypercube Design |
| sfheaders | Converts Between R Objects and Simple Feature Objects |
| sfhotspot | Hot-Spot Analysis with Simple Features |
| sfinx | Straightforward Filtering Index for AP-MS Data Analysis (SFINX) |
| sfnetworks | Tidy Geospatial Networks |
| sfo | San Francisco International Airport Monthly Air Passengers |
| SFS | Similarity-First Search Seriation Algorithm |
| SFSI | Sparse Family and Selection Index |
| sfsmisc | Utilities from 'Seminar fuer Statistik' ETH Zurich |
| sft | Functions for Systems Factorial Technology Analysis of Data |
| sftime | Classes and Methods for Simple Feature Objects that Have a Time Column |
| SFtools | Space Filling Based Tools for Data Mining |
| sftrack | Modern Classes for Tracking and Movement Data |
| sgat | Extract Information from Google's "Popular Times" |
| SGB | Simplicial Generalized Beta Regression |
| sGBJ | Survival Extension of the Generalized Berk-Jones Test |
| sgd | Stochastic Gradient Descent for Scalable Estimation |
| sgee | Stagewise Generalized Estimating Equations |
| sgeostat | An Object-Oriented Framework for Geostatistical Modeling in S+ |
| SGL | Fit a GLM (or Cox Model) with a Combination of Lasso and Group Lasso Regularization |
| sglasso | Lasso Method for RCON(V,E) Models |
| sglg | Fitting Semi-Parametric Generalized log-Gamma Regression Models |
| sglOptim | Generic Sparse Group Lasso Solver |
| sglr | Sequential Generalized Likelihood Ratio Decision Boundaries Proposed by Shih, Lai, Heyse and Chen (2010, <doi:10.1002/Sim.4036>) |
| sgmcmc | Stochastic Gradient Markov Chain Monte Carlo |
| sgmodel | Solves a Generic Stochastic Growth Model with a Representative Agent |
| sGMRFmix | Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection |
| sgo | Simple Geographical Operations (with OSGB36) |
| sgof | Multiple Hypothesis Testing |
| SGP | Student Growth Percentiles & Percentile Growth Trajectories |
| SGPdata | Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses |
| sgPLS | Sparse Group Partial Least Square Methods |
| sgpv | Calculate Second-Generation p-Values and Associated Measures |
| sgr | Sample Generation by Replacement |
| sgsR | Structurally Guided Sampling |
| sgstar | Seasonal Generalized Space Time Autoregressive (S-GSTAR) Model |
| sgt | Skewed Generalized T Distribution Tree |
| shades | Simple Colour Manipulation |
| shadow | Geometric Shadow Calculations |
| shadowr | Selenium Plugin to Manage Multi Level Shadow Elements on Web Page |
| shadowtext | Shadow Text Grob and Layer |
| shallot | Random Partition Distribution Indexed by Pairwise Information |
| shape | Functions for Plotting Graphical Shapes, Colors |
| ShapeChange | Change-Point Estimation using Shape-Restricted Splines |
| shapefiles | Read and Write ESRI Shapefiles |
| shapeNA | M-Estimation of Shape for Data with Missing Values |
| ShapePattern | Tools for Analyzing Shapes and Patterns |
| ShapeRotator | Standardised Rigid Rotations of Articulated Three-Dimensional Structures |
| shapes | Statistical Shape Analysis |
| ShapeSelectForest | Shape Selection for Landsat Time Series of Forest Dynamics |
| SHAPforxgboost | SHAP Plots for 'XGBoost' |
| ShapleyValue | Shapley Value Regression for Relative Importance of Attributes |
| shapper | Wrapper of Python Library 'shap' |
| shapr | Prediction Explanation with Dependence-Aware Shapley Values |
| shapviz | SHAP Visualizations |
| shar | Species-Habitat Associations |
| sharp | Stability-enHanced Approaches using Resampling Procedures |
| sharpData | Data Sharpening |
| SharpeR | Statistical Significance of the Sharpe Ratio |
| sharpeRratio | Moment-Free Estimation of Sharpe Ratios |
| sharpPen | Penalized Data Sharpening for Local Polynomial Regression |
| sharpr2 | Estimating Regulatory Scores and Identifying ATAC-STARR Data |
| sharpshootR | A Soil Survey Toolkit |
| sharx | Models and Data Sets for the Study of Species-Area Relationships |
| shattering | Estimate the Shattering Coefficient for a Particular Dataset |
| shazam | Immunoglobulin Somatic Hypermutation Analysis |
| SheetReader | Parse xlsx Files |
| SHELF | Tools to Support the Sheffield Elicitation Framework |
| ShellChron | Builds Chronologies from Oxygen Isotope Profiles in Shells |
| shelltrace | Bivalve Growth and Trace Element Accumulation Model |
| shidashi | A Shiny Dashboard Template System |
| ShiftConvolvePoibin | Exactly Computing the Tail of the Poisson-Binomial Distribution |
| shiftR | Fast Enrichment Analysis via Circular Permutations |
| ShiftShareSE | Inference in Regressions with Shift-Share Structure |
| shinipsum | Lorem-Ipsum Helper Function for 'shiny' Prototyping |
| shiny | Web Application Framework for R |
| shiny.i18n | Shiny Applications Internationalization |
| shiny.info | 'shiny' Info |
| shiny.pwa | Progressive Web App Support for Shiny |
| shiny.react | Tools for Using React in Shiny |
| shiny.reglog | Optional Login and Registration Module System for ShinyApps |
| shiny.router | Basic Routing for Shiny Web Applications |
| shiny.semantic | Semantic UI Support for Shiny |
| shiny.worker | Delegate Jobs for Shiny Web Applications |
| shinyAce | Ace Editor Bindings for Shiny |
| shinyaframe | 'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame' |
| shinyalert | Easily Create Pretty Popup Messages (Modals) in 'Shiny' |
| shinyanimate | Animation for 'shiny' Elements |
| shinyauthr | 'Shiny' Authentication Modules |
| shinybrms | Graphical User Interface ('shiny' App) for 'brms' |
| shinybrowser | Find Out Information About a User's Web Browser in 'Shiny' |
| shinyBS | Twitter Bootstrap Components for Shiny |
| shinybusy | Busy Indicators and Notifications for 'Shiny' Applications |
| shinyChakraSlider | Combined Slider and Numeric Input for 'Shiny' |
| shinyChakraUI | A Wrapper of the 'React' Library 'Chakra UI' for 'Shiny' |
| shinyCohortBuilder | Modular Cohort-Building Framework for Analytical Dashboards |
| shinycssloaders | Add Loading Animations to a 'shiny' Output While It's Recalculating |
| shinycustomloader | Custom Loader for Shiny Outputs |
| shinyCyJS | Create Interactive Network Visualizations in R and 'shiny' |
| shinydashboard | Create Dashboards with 'Shiny' |
| shinydashboardPlus | Add More 'AdminLTE2' Components to 'shinydashboard' |
| shinydisconnect | Show a Nice Message When a 'Shiny' App Disconnects or Errors |
| shinydlplot | Add a Download Button to a 'shiny' Plot or 'plotly' |
| shinyDND | Shiny Drag-n-Drop |
| shinydrive | File Sharing Shiny Module |
| shinyEffects | Customize Your Web Apps with Fancy Effects |
| shinyFeedback | Display User Feedback in Shiny Apps |
| shinyFiles | A Server-Side File System Viewer for Shiny |
| shinyfilter | Use Interdependent Filters on Table Columns in Shiny Apps |
| shinyfullscreen | Display 'HTML' Elements on Full Screen in 'Shiny' Apps |
| shinyGizmo | Custom Components for Shiny Applications |
| shinyglide | Glide Component for Shiny Applications |
| shinyGovstyle | Custom Gov Style Inputs for Shiny |
| shinyHeatmaply | Deploy 'heatmaply' using 'shiny' |
| shinyhelper | Easily Add Markdown Help Files to 'shiny' App Elements |
| shinyhttr | Progress Bars for Downloads in 'shiny' Apps |
| shinyIRT | Item Response Theory Analysis with a 'shiny' Application |
| ShinyItemAnalysis | Test and Item Analysis via Shiny |
| shinyjqui | 'jQuery UI' Interactions and Effects for Shiny |
| shinyjs | Easily Improve the User Experience of Your Shiny Apps in Seconds |
| shinyKGode | An Interactive Application for ODE Parameter Inference Using Gradient Matching |
| shinyKnobs | A Collection of Knob Inputs for 'shiny' |
| shinyloadtest | Load Test Shiny Applications |
| shinylogs | Record Everything that Happens in a 'Shiny' Application |
| shinyLP | Bootstrap Landing Home Pages for Shiny Applications |
| shinymanager | Authentication Management for 'Shiny' Applications |
| shinymaterial | Implement Material Design in Shiny Applications |
| shinyMatrix | Shiny Matrix Input Field |
| shinyMergely | Compare and Merge Two Files with a 'Shiny' App |
| shinymeta | Export Domain Logic from Shiny using Meta-Programming |
| shinyML | Compare Supervised Machine Learning Models Using Shiny App |
| shinyMobile | Mobile Ready 'shiny' Apps with Standalone Capabilities |
| shinymodels | Interactive Assessments of Models |
| shinyMolBio | Molecular Biology Visualization Tools for 'Shiny' Apps |
| shinyMonacoEditor | The 'Monaco' Editor in 'Shiny' |
| shinyNORRRM | The Ultimate Igneous Norm |
| shinyNotes | Shiny Module for Taking Free-Form Notes |
| shinyobjects | Access Reactive Data Interactively |
| shinypanel | Shiny Control Panel |
| shinypanels | Shiny Layout with Collapsible Panels |
| shinypivottabler | Shiny Module to Create Pivot Tables |
| shinyPredict | Predictions using Shiny |
| ShinyQuickStarter | 'RStudio' Addin for Building Shiny Apps per Drag & Drop |
| shinyr | Data Insights Through Inbuilt R Shiny App |
| shinyRadioMatrix | Create a Matrix with Radio Buttons |
| shinyrecipes | Gadget to Use the Data Preprocessing 'recipes' Package Interactively |
| shinyreforms | Add Forms to your 'Shiny' App |
| shinyRGL | Shiny Wrappers for RGL |
| shinyscreenshot | Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny' |
| shinySearchbar | Shiny Searchbar - An Input Widget for Highlighting Text and More |
| shinySelect | A Wrapper of the 'react-select' Library |
| shinyservicebot | Servicebot 'Shiny' Integration |
| shinyShortcut | Creates an Executable Shortcut for Shiny Applications |
| shinySIR | Interactive Plotting for Mathematical Models of Infectious Disease Spread |
| shinystan | Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models |
| shinyStorePlus | Secure in-Browser Storage for 'Shiny' Inputs and Variables |
| shinysurveys | Create and Deploy Surveys in 'Shiny' |
| shinyTempSignal | Explore Temporal Signal of Molecular Phylogenies |
| shinytest | Test Shiny Apps |
| shinytest2 | Testing for Shiny Applications |
| ShinyTester | Functions to Minimize Bonehead Moves While Working with 'shiny' |
| shinythemes | Themes for Shiny |
| shinyTime | A Time Input Widget for Shiny |
| shinytitle | Update Browser Window Title in 'shiny' Session |
| shinyToastify | Pretty Notifications for 'Shiny' |
| shinytoastr | Notifications from 'Shiny' |
| shinyTree | jsTree Bindings for Shiny |
| shinyvalidate | Input Validation for Shiny Apps |
| shinyWidgets | Custom Inputs Widgets for Shiny |
| shipunov | Miscellaneous Functions from Alexey Shipunov |
| shock | Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models |
| shopifyr | An R Interface to the Shopify API |
| shortcuts | Useful Shortcuts to Interact with 'RStudio' Scripts |
| ShortForm | Automatic Short Form Creation |
| shorts | Short Sprints |
| shotGroups | Analyze Shot Group Data |
| showimage | Show an Image on an 'R' Graphics Device |
| showtext | Using Fonts More Easily in R Graphs |
| showtextdb | Font Files for the 'showtext' Package |
| shp2graph | Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object |
| shrink | Global, Parameterwise and Joint Shrinkage Factor Estimation |
| ShrinkCovMat | Shrinkage Covariance Matrix Estimators |
| shrinkDSM | Efficient Bayesian Inference for Dynamic Survival Models with Shrinkage |
| shrinkTVP | Efficient Bayesian Inference for Time-Varying Parameter Models with Shrinkage |
| SHT | Statistical Hypothesis Testing Toolbox |
| shuffle | The Shuffle Estimator for Explainable Variance |
| shuffleCI | Confidence Intervals Compared via Shuffling |
| shutterplot | The R Shutter Plot Package |
| shutterstock | Access 'Shutterstock' REST API |
| SI | Stochastic Integrating |
| SIBER | Stable Isotope Bayesian Ellipses in R |
| SIBERG | Systematic Identification of Bimodally Expressed Genes Using RNAseq Data |
| sicegar | Analysis of Single-Cell Viral Growth Curves |
| siconfir | Quick and Easy Access Tax and Accounting Data of Brazil |
| siconvr | Fetch Data from Plataforma +Brasil (SICONV) |
| SIDES | Subgroup Identification Based on Differential Effect Search |
| sidier | Substitution and Indel Distances to Infer Evolutionary Relationships |
| sidrar | An Interface to IBGE's SIDRA API |
| siebanxicor | Query Data Series from Bank of Mexico |
| SiER | Signal Extraction Approach for Sparse Multivariate Response Regression |
| Sieve | Nonparametric Estimation by the Method of Sieves |
| sievePH | Sieve Analysis Methods for Proportional Hazards Models |
| sievetest | Laboratory Sieve Test Reporting Functions |
| SIfEK | Statistical Inference for Enzyme Kinetics |
| sift | Intelligently Peruse Data |
| sig | Print Function Signatures |
| sigclust | Statistical Significance of Clustering |
| SightabilityModel | Wildlife Sightability Modeling |
| sigInt | Estimate the Parameters of a Discrete Crisis-Bargaining Game |
| sigmajs | Interface to 'Sigma.js' Graph Visualization Library |
| sigminer | Extract, Analyze and Visualize Mutational Signatures for Genomic Variations |
| sigmoid | Sigmoid Functions for Machine Learning |
| SIGN | Similarity Identification in Gene Expression |
| Signac | Analysis of Single-Cell Chromatin Data |
| SignacX | Cell Type Identification and Discovery from Single Cell Gene Expression Data |
| signal | Signal Processing |
| signalHsmm | Predict Presence of Signal Peptides |
| signed.backbones | Extract the Signed Backbones of Weighted Networks |
| signibox | Statistical Significance Marks on Boxplots |
| SignifReg | Consistent Significance Controlled Variable Selection in Generalized Linear Regression |
| signnet | Methods to Analyse Signed Networks |
| signs | Insert Proper Minus Signs |
| SigOptR | R API Wrapper for SigOpt |
| sigora | Signature Overrepresentation Analysis |
| sigr | Succinct and Correct Statistical Summaries for Reports |
| SigTree | Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree |
| SIHR | Statistical Inference in High Dimensional Regression |
| siland | Spatial Influence of Landscape |
| SILGGM | Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks |
| silicate | Common Forms for Complex Hierarchical and Relational Data Structures |
| SILM | Simultaneous Inference for Linear Models |
| Sim.DiffProc | Simulation of Diffusion Processes |
| Sim.PLFN | Simulation of Piecewise Linear Fuzzy Numbers |
| sim1000G | Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes |
| sim2Dpredictr | Simulate Outcomes Using Spatially Dependent Design Matrices |
| SimBIID | Simulation-Based Inference Methods for Infectious Disease Models |
| simboot | Simultaneous Inference for Diversity Indices |
| simcdm | Simulate Cognitive Diagnostic Model ('CDM') Data |
| SimComp | Simultaneous Comparisons for Multiple Endpoints |
| SimCop | Simulate from Arbitrary Copulae |
| SimCorMultRes | Simulates Correlated Multinomial Responses |
| SimCorrMix | Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions |
| simcross | Simulate Experimental Crosses |
| simctest | Safe Implementation of Monte Carlo Tests |
| SimDesign | Structure for Organizing Monte Carlo Simulation Designs |
| SimDissolution | Modeling and Assessing Similarity of Drug Dissolutions Profiles |
| simdistr | Assessment of Data Trial Distributions According to the Carlisle-Stouffer Method |
| simDNAmixtures | Simulate Forensic DNA Mixtures |
| simecol | Simulation of Ecological (and Other) Dynamic Systems |
| simEd | Simulation Education |
| SimEngine | A Modular Framework for Statistical Simulations in R |
| simer | Data Simulation for Life Science and Breeding |
| simest | Constrained Single Index Model Estimation |
| SimEUCartelLaw | Simulation of Legal Exemption System for European Cartel Law |
| simex | SIMEX- And MCSIMEX-Algorithm for Measurement Error Models |
| simexaft | simexaft |
| simExam | Generate Simulated Data for IRT-Enabled Exams |
| SIMEXBoost | Boosting Method for High-Dimensional Error-Prone Data |
| simfam | Simulate and Model Family Pedigrees with Structured Founders |
| simfinapi | Accessing 'SimFin' Data |
| simfit | Test Model Fit with Simulation |
| simFrame | Simulation Framework |
| simglm | Simulate Models Based on the Generalized Linear Model |
| simgof | Simultaneous Goodness-of-Fits Tests |
| SimHaz | Simulated Survival and Hazard Analysis for Time-Dependent Exposure |
| simhelpers | Helper Functions for Simulation Studies |
| SimilaR | R Source Code Similarity Evaluation |
| SimilarityMeasures | Trajectory Similarity Measures |
| Simile | Interact with Simile Models |
| SimInf | A Framework for Data-Driven Stochastic Disease Spread Simulations |
| simIReff | Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores |
| simITS | Analysis via Simulation of Interrupted Time Series (ITS) Data |
| SimJoint | Simulate Joint Distribution |
| simlandr | Simulation-Based Landscape Construction for Dynamical Systems |
| simmer | Discrete-Event Simulation for R |
| simmer.bricks | Helper Methods for 'simmer' Trajectories |
| simmer.plot | Plotting Methods for 'simmer' |
| simMetric | Metrics (with Uncertainty) for Simulation Studies that Evaluate Statistical Methods |
| simml | Single-Index Models with Multiple-Links |
| simMP | Simulate Somatic Mutations in Cancer Genomes from Mutational Processes |
| simmr | A Stable Isotope Mixing Model |
| SIMMS | Subnetwork Integration for Multi-Modal Signatures |
| simMSM | Simulation of Event Histories for Multi-State Models |
| SimMultiCorrData | Simulation of Correlated Data with Multiple Variable Types |
| simode | Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching |
| simodels | Flexible Framework for Developing Spatial Interaction Models |
| simPATHy | A Method for Simulating Data from Perturbed Biological Pathways |
| simPH | Simulate and Plot Estimates from Cox Proportional Hazards Models |
| SimPhe | Tools to Simulate Phenotype(s) with Epistatic Interaction |
| simphony | Simulating Large-Scale, Rhythmic Data |
| SIMPLE.REGRESSION | Multiple Regression and Moderated Regression Made Simple |
| simpleboot | Simple Bootstrap Routines |
| simpleCache | Simply Caching R Objects |
| simplecolors | Access Color Names Using a Standardized Nomenclature |
| simpleFDR | Simple False Discovery Rate Calculation |
| simplegraph | Simple Graph Data Types and Basic Algorithms |
| simplegraphdb | A Simple Graph Database |
| simpleMH | Simple Metropolis-Hastings MCMC Algorithm |
| simpleMLP | Simple Multilayer Perceptron Neural Network |
| simpleNeural | An Easy to Use Multilayer Perceptron |
| simplePHENOTYPES | Simulation of Pleiotropic, Linked and Epistatic Phenotypes |
| simpleRCache | Simple R Cache |
| simplermarkdown | Simple Engine for Generating Reports using R |
| simpleSetup | Set Up R Source Code Files for Use on Multiple Machines |
| simplevis | Wrappers to Simplify Beautiful 'ggplot2' and 'leaflet' Visualisation |
| simplexreg | Regression Analysis of Proportional Data Using Simplex Distribution |
| simplextree | Provides Tools for Working with General Simplicial Complexes |
| SimplicialCubature | Integration of Functions Over Simplices |
| SimplifyStats | Simplifies Pairwise Statistical Analyses |
| SimplyAgree | Flexible and Robust Agreement and Reliability Analyses |
| simPop | Simulation of Complex Synthetic Data Information |
| simpr | Flexible 'Tidyverse'-Friendly Simulations |
| simputation | Simple Imputation |
| simr | Power Analysis for Generalised Linear Mixed Models by Simulation |
| SimRAD | Simulations to Predict the Number of RAD and GBS Loci |
| simrec | Simulation of Recurrent Event Data for Non-Constant Baseline Hazard |
| SimReg | Similarity Regression |
| simrel | Simulation of Multivariate Linear Model Data |
| SiMRiv | Simulating Multistate Movements in River/Heterogeneous Landscapes |
| SimRVPedigree | Simulate Pedigrees Ascertained for a Rare Disease |
| sims | Simulate Data from R or 'JAGS' Code |
| simsalapar | Tools for Simulation Studies in Parallel |
| SimSCRPiecewise | 'Simulates Univariate and Semi-Competing Risks Data Given Covariates and Piecewise Exponential Baseline Hazards' |
| simsem | SIMulated Structural Equation Modeling |
| SimSeq | Nonparametric Simulation of RNA-Seq Data |
| simsl | Single-Index Models with a Surface-Link |
| simstandard | Generate Standardized Data |
| simstudy | Simulation of Study Data |
| simsurv | Simulate Survival Data |
| SimSurvey | Test Surveys by Simulating Spatially-Correlated Populations |
| SimSurvNMarker | Simulate Survival Time and Markers |
| simTargetCov | Data Transformation or Simulation with Empirical Covariance Matrix |
| simtimer | Datetimes as Integers for Discrete-Event Simulations |
| SimTimeVar | Simulate Longitudinal Dataset with Time-Varying Correlated Covariates |
| simTool | Conduct Simulation Studies with a Minimal Amount of Source Code |
| simtrait | Simulate Complex Traits from Genotypes |
| simts | Time Series Analysis Tools |
| simukde | Simulation with Kernel Density Estimation |
| simulariatools | Simularia Tools for the Analysis of Air Pollution Data |
| simule | A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models |
| SimVitD | Simulation Tools for Planning Vitamin D Studies |
| sinaplot | An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes |
| sinar | Conditional Least Squared (CLS) Method for the Model SINAR(1,1) |
| sindyr | Sparse Identification of Nonlinear Dynamics |
| sinew | Package Development Documentation and Namespace Management |
| singcar | Comparing Single Cases to Small Samples |
| SingleCaseES | A Calculator for Single-Case Effect Sizes |
| singleCellHaystack | Finding Needles (=differentially Expressed Genes) in Haystacks (=single Cell Data) |
| sinib | Sum of Independent Non-Identical Binomial Random Variables |
| SinIW | The SinIW Distribution |
| SIPDIBGE | Collection of Household Survey Packages Conducted by IBGE |
| siplab | Spatial Individual-Plant Modelling |
| siqr | An R Package for Single-Index Quantile Regression |
| sirad | Functions for Calculating Daily Solar Radiation and Evapotranspiration |
| SIRE | Finding Feedback Effects in SEM and Testing for Their Significance |
| siren | Hybrid FA-CFA for Controlling Acquiescence in Restricted Factorial Solutions |
| SIRmcmc | Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection |
| sirt | Supplementary Item Response Theory Models |
| sirus | Stable and Interpretable RUle Set |
| SIS | Sure Independence Screening |
| sisal | Sequential Input Selection Algorithm |
| SISIR | Sparse Interval Sliced Inverse Regression |
| sisireg | Sign-Simplicity-Regression-Solver |
| sistec | Tools to Analyze 'Sistec' Datasets |
| sistmr | A Collection of Utility Function from the Inserm/Inria SISTM Team |
| sisVIVE | Some Invalid Some Valid Instrumental Variables Estimator |
| sitar | Super Imposition by Translation and Rotation Growth Curve Analysis |
| SiteAdapt | Site Adaptation of Solar Irradiance Modeled Series |
| SitesInterest | Inferring an Animal's Sites of Interest from High Resolution Data |
| siteymlgen | Automatically Generate _site.yml File for 'R Markdown' |
| SITH | A Spatial Model of Intra-Tumor Heterogeneity |
| sitmo | Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files |
| sitools | Format a number to a string with SI prefix |
| sitree | Single Tree Simulator |
| sitreeE | Sitree Extensions |
| sits | Satellite Image Time Series Analysis for Earth Observation Data Cubes |
| sivs | Stable Iterative Variable Selection |
| SixSigma | Six Sigma Tools for Quality Control and Improvement |
| SizeEstimation | Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model |
| sizeMat | Estimate Size at Sexual Maturity |
| SiZer | Significant Zero Crossings |
| sjdbc | JDBC Driver Interface |
| sjlabelled | Labelled Data Utility Functions |
| sjmisc | Data and Variable Transformation Functions |
| sjPlot | Data Visualization for Statistics in Social Science |
| sjSDM | Scalable Joint Species Distribution Modeling |
| sjstats | Collection of Convenient Functions for Common Statistical Computations |
| sjtable2df | Convert 'sjPlot' HTML-Tables to R 'data.frame' |
| SKAT | SNP-Set (Sequence) Kernel Association Test |
| skater | Utilities for SNP-Based Kinship Analysis |
| skedastic | Heteroskedasticity Diagnostics for Linear Regression Models |
| skeletor | An R Package Skeleton Generator |
| skellam | Densities and Sampling for the Skellam Distribution |
| sketch | Interactive Sketches |
| sketcher | Pencil Sketch Effect |
| sketching | Sketching of Data via Random Subspace Embeddings |
| sketchy | Create Custom Research Compendiums |
| SkeweDF | Optimization of Skewed Distributions with Birth-Death Processes |
| SkewHyperbolic | The Skew Hyperbolic Student t-Distribution |
| skewlmm | Scale Mixture of Skew-Normal Linear Mixed Models |
| skewMLRM | Estimation for Scale-Shape Mixtures of Skew-Normal Distributions |
| skewsamp | Estimate Sample Sizes for Group Comparisons with Skewed Distributions |
| skewt | The Skewed Student-t Distribution |
| Skillings.Mack | The Skillings-Mack Test Statistic for Block Designs with Missing Observations |
| skilljaR | Connect to Your 'Skilljar' Data with R |
| skimr | Compact and Flexible Summaries of Data |
| sklarsomega | Measuring Agreement Using Sklar's Omega Coefficient |
| skm | Selective k-Means |
| skmeans | Spherical k-Means Clustering |
| sknifedatar | Swiss Knife of Data |
| SKNN | A Super K-Nearest Neighbor (SKNN) Classification Algorithm |
| skpr | Design of Experiments Suite: Generate and Evaluate Optimal Designs |
| Sky | Canopy Openness Analyzer Package |
| skynet | Generates Networks from BTS Data |
| skyscapeR | Data Analysis and Visualization for Skyscape Archaeology |
| slackr | Send Messages, Images, R Objects and Files to 'Slack' Channels/Users |
| slam | Sparse Lightweight Arrays and Matrices |
| slanter | Slanted Matrices and Ordered Clustering |
| SlaPMEG | Pathway Testing for Longitudinal Omics |
| slasso | S-LASSO Estimator for the Function-on-Function Linear Regression |
| SLBDD | Statistical Learning for Big Dependent Data |
| sld | Estimation and Use of the Quantile-Based Skew Logistic Distribution |
| SLDAssay | Software for Analyzing Limiting Dilution Assays |
| sleekts | 4253H, Twice Smoothing |
| SleepCycles | Sleep Cycle Detection |
| sleepr | Analyse Activity and Sleep Behaviour |
| sleepwalk | Interactively Explore Dimension-Reduced Embeddings |
| sleev | Semiparametric Likelihood Estimation with Errors in Variables |
| SLEMI | Statistical Learning Based Estimation of Mutual Information |
| slendr | A Simulation Framework for Spatiotemporal Population Genetics |
| Sleuth2 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)" |
| Sleuth3 | Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)" |
| slfm | Fitting a Bayesian Sparse Latent Factor Model in Gene Expression Analysis |
| SLFPCA | Sparse Logistic Functional Principal Component Analysis |
| slgf | Bayesian Model Selection with Suspected Latent Grouping Factors |
| SLHD | Maximin-Distance (Sliced) Latin Hypercube Designs |
| slickR | Create Interactive Carousels with the 'JavaScript' 'Slick' Library |
| SLIDE | Single Cell Linkage by Distance Estimation is SLIDE |
| slider | Sliding Window Functions |
| slideview | Compare Raster Images Side by Side with a Slider |
| SlidingWindows | Methods for Time Series Analysis |
| slim | Singular Linear Models for Longitudinal Data |
| slimrec | Sparse Linear Method to Predict Ratings and Top-N Recommendations |
| slippymath | Slippy Map Tile Tools |
| slm | Stationary Linear Models |
| SLModels | Stepwise Linear Models for Binary Classification Problems under Youden Index Optimisation |
| sloop | Helpers for 'OOP' in R |
| SLOPE | Sorted L1 Penalized Estimation |
| slopeOP | Change-in-Slope OP Algorithm with a Finite Number of States |
| slouch | Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses |
| slowraker | A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm |
| slp | Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers |
| SLTCA | Scalable and Robust Latent Trajectory Class Analysis |
| slurmR | A Lightweight Wrapper for 'Slurm' |
| sm | Smoothing Methods for Nonparametric Regression and Density Estimation |
| smaa | Stochastic Multi-Criteria Acceptability Analysis |
| smacof | Multidimensional Scaling |
| smacpod | Statistical Methods for the Analysis of Case-Control Point Data |
| smallarea | Fits a Fay Herriot Model |
| SmallCountRounding | Small Count Rounding of Tabular Data |
| smallstuff | Dr. Small's Functions |
| smam | Statistical Modeling of Animal Movements |
| smapr | Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data |
| SMARTAR | Sequential Multiple Assignment Randomized Trial and Adaptive Randomization |
| SMARTbayesR | Bayesian Set of Best Dynamic Treatment Regimes and Sample Size in SMARTs for Binary Outcomes |
| smartDesign | Sequential Multiple Assignment Randomized Trial Design |
| SmartEDA | Summarize and Explore the Data |
| SmarterPoland | Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl |
| smartmap | Smartly Create Maps from R Objects |
| SmartMeterAnalytics | Methods for Smart Meter Data Analysis |
| SMARTp | Sample Size for SMART Designs in Non-Surgical Periodontal Trials |
| smartsizer | Power Analysis for a SMART Design |
| smartsnp | Fast Multivariate Analyses of Big Genomic Data |
| SmartSVA | Fast and Robust Surrogate Variable Analysis |
| smatr | (Standardised) Major Axis Estimation and Testing Routines |
| smbinning | Scoring Modeling and Optimal Binning |
| SmCCNet | Sparse Multiple Canonical Correlation Network Analysis Tool |
| smcfcs | Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification |
| SMCRM | Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012) |
| smcure | Fit Semiparametric Mixture Cure Models |
| smd | Compute Standardized Mean Differences |
| smdata | Data to Accompany Smithson & Merkle, 2013 |
| SMDIC | Identification of Somatic Mutation-Driven Immune Cells |
| smerc | Statistical Methods for Regional Counts |
| SMFilter | Filtering Algorithms for the State Space Models on the Stiefel Manifold |
| smfishHmrf | Hidden Markov Random Field for Spatial Transcriptomic Data |
| smfsb | Stochastic Modelling for Systems Biology |
| smicd | Statistical Methods for Interval-Censored Data |
| smile | Spatial Misalignment: Interpolation, Linkage, and Estimation |
| smirnov | Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book |
| SMITIDstruct | Data Structure and Manipulations Tool for Host and Viral Population |
| SMITIDvisu | Visualize Data for Host and Viral Population from 'SMITIDstruct' using 'HTMLwidgets' |
| SMLE | Joint Feature Screening via Sparse MLE |
| smlmkalman | Generation and Tracking of Super-Resolution Filamentous Datasets |
| SMLoutliers | Outlier Detection Using Statistical and Machine Learning Methods |
| SMM | Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models |
| SMMA | Soft Maximin Estimation for Large Scale Array-Tensor Models |
| SMME | Soft Maximin Estimation for Large Scale Heterogeneous Data |
| smmR | Simulation, Estimation and Reliability of Semi-Markov Models |
| SMMT | The Swiss Municipal Data Merger Tool Maps Municipalities Over Time |
| SMNCensReg | Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions |
| smnet | Smoothing for Stream Network Data |
| smog | Structural Modeling by using Overlapped Group Penalty |
| smoke | Small Molecule Octet/BLI Kinetics Experiment |
| smoof | Single and Multi-Objective Optimization Test Functions |
| smooth | Forecasting Using State Space Models |
| smoothAPC | Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects |
| smoothedLasso | A Framework to Smooth L1 Penalized Regression Operators using Nesterov Smoothing |
| smoother | Functions Relating to the Smoothing of Numerical Data |
| SmoothHazard | Estimation of Smooth Hazard Models for Interval-Censored Data with Applications to Survival and Illness-Death Models |
| smoothHR | Smooth Hazard Ratio Curves Taking a Reference Value |
| smoothic | Variable Selection Using a Smooth Information Criterion |
| smoothie | Two-Dimensional Field Smoothing |
| smoothmest | Smoothed M-Estimators for 1-Dimensional Location |
| smoothr | Smooth and Tidy Spatial Features |
| smoothROCtime | Smooth Time-Dependent ROC Curve Estimation |
| smoothSurv | Survival Regression with Smoothed Error Distribution |
| smoothtail | Smooth Estimation of GPD Shape Parameter |
| SmoothTensor | A Collection of Smooth Tensor Estimation Methods |
| SmoothWin | Soft Windowing on Linear Regression |
| smoots | Nonparametric Estimation of the Trend and Its Derivatives in TS |
| smotefamily | A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE |
| smovie | Some Movies to Illustrate Concepts in Statistics |
| smpic | Creates Images Sized for Social Media |
| SMPracticals | Practicals for Use with Davison (2003) Statistical Models |
| SMR | Externally Studentized Midrange Distribution |
| sms | Spatial Microsimulation |
| smss | Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences" |
| smurf | Sparse Multi-Type Regularized Feature Modeling |
| SMUT | Multi-SNP Mediation Intersection-Union Test |
| SMVar | Structural Model for Variances |
| smvgraph | Various Multivariate Graphics with Variable Choice in Shiny Apps |
| sn | The Skew-Normal and Related Distributions Such as the Skew-t and the SUN |
| sna | Tools for Social Network Analysis |
| snahelper | 'RStudio' Addin for Network Analysis and Visualization |
| Snake | Game of Snake |
| snakecase | Convert Strings into any Case |
| SnakesAndLaddersAnalysis | Play and Analyse the Game of Snakes and Ladders |
| snap | Simple Neural Application |
| snapshot | Gadget N-body cosmological simulation code snapshot I/O utilities |
| snem | EM Algorithm for Multivariate Skew-Normal Distribution with Overparametrization |
| snfa | Smooth Non-Parametric Frontier Analysis |
| SNFtool | Similarity Network Fusion |
| snht | Standard Normal Homogeneity Test |
| snn | Stabilized Nearest Neighbor Classifier |
| snotelr | Calculate and Visualize 'SNOTEL' Snow Data and Seasonality |
| snow | Simple Network of Workstations |
| SnowballC | Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library |
| snowboot | Bootstrap Methods for Network Inference |
| snowfall | Easier Cluster Computing (Based on 'snow') |
| snowflakes | Random Snowflake Generator |
| snowFT | Fault Tolerant Simple Network of Workstations |
| SNPannotator | Investigating the Functional Characteristics of Selected SNPs and Their Vicinity Genomic Region |
| SNPassoc | SNPs-Based Whole Genome Association Studies |
| snpEnrichment | SNPs Enrichment Analysis |
| SNPfiltR | Interactively Filter SNP Datasets |
| SNPknock | Knockoffs for Hidden Markov Models and Genetic Data |
| snplist | Tools to Create Gene Sets |
| sNPLS | NPLS Regression with L1 Penalization |
| snpReady | Preparing Genotypic Datasets in Order to Run Genomic Analysis |
| snpsettest | A Set-Based Association Test using GWAS Summary Statistics |
| sns | Stochastic Newton Sampler (SNS) |
| SNscan | Scan Statistics in Social Networks |
| SNSchart | Sequential Normal Scores in Statistical Process Management |
| SOAR | Memory management in R by delayed assignments |
| SOAs | Creation of Stratum Orthogonal Arrays |
| sobolnp | Nonparametric Sobol Estimator with Bootstrap Bandwidth |
| SobolSequence | Sobol Sequences with Better Two-Dimensional Projections |
| soc.ca | Specific Correspondence Analysis for the Social Sciences |
| socceR | Evaluating Sport Tournament Predictions |
| social | Social Autocorrelation |
| socialh | Rank and Social Hierarchy for Gregarious Animals |
| socialmixr | Social Mixing Matrices for Infectious Disease Modelling |
| SocialPosition | Social Position Indicators Construction Toolbox |
| socialranking | Social Ranking Solutions for Power Relations on Coalitions |
| socialrisk | Identifying Patient Social Risk from Administrative Health Care Data |
| sociome | Operationalizing Social Determinants of Health Data for Researchers |
| socviz | Utility Functions and Data Sets for Data Visualization |
| SoDA | Functions and Examples for "Software for Data Analysis" |
| sodavis | SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models |
| sodium | A Modern and Easy-to-Use Crypto Library |
| sofa | Connector to 'CouchDB' |
| Sofi | Interfaz interactiva con fines didacticos |
| SOFIA | Making Sophisticated and Aesthetical Figures in R |
| softclassval | Soft Classification Performance Measures |
| SoftClustering | Soft Clustering Algorithms |
| softImpute | Matrix Completion via Iterative Soft-Thresholded SVD |
| SOIL | Sparsity Oriented Importance Learning |
| soilassessment | Assessment Models for Agriculture Soil Conditions and Crop Suitability |
| soilDB | Soil Database Interface |
| SoilHyP | Soil Hydraulic Properties |
| soilhypfit | Modelling of Soil Water Retention and Hydraulic Conductivity Data |
| soilphysics | Soil Physical Analysis |
| SoilR | Models of Soil Organic Matter Decomposition |
| SoilTaxonomy | A System of Soil Classification for Making and Interpreting Soil Surveys |
| soiltestcorr | Soil Test Correlation and Calibration |
| SoilTesting | Organic Carbon and Plant Available Nutrient Contents in Soil |
| soiltexture | Functions for Soil Texture Plot, Classification and Transformation |
| soilwater | Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve |
| Sojourn | Apply Sojourn Methods for Processing ActiGraph Accelerometer Data |
| Sojourn.Data | Supporting Objects for Sojourn Accelerometer Methods |
| sokoban | Sokoban Game |
| solaR | Radiation and Photovoltaic Systems |
| solarPos | Solar Position Algorithm for Solar Radiation Applications |
| solartime | Utilities Dealing with Solar Time Such as Sun Position and Time of Sunrise |
| solitude | An Implementation of Isolation Forest |
| solrad | Calculating Solar Radiation and Related Variables Based on Location, Time and Topographical Conditions |
| solrium | General Purpose R Interface to 'Solr' |
| solvebio | The Official SolveBio API Client |
| SolveSAPHE | Solver Suite for Alkalinity-PH Equations |
| som | Self-Organizing Map |
| som.nn | Topological k-NN Classifier Based on Self-Organising Maps |
| soma | General-Purpose Optimisation with the Self-Organising Migrating Algorithm |
| SOMbrero | SOM Bound to Realize Euclidean and Relational Outputs |
| someMTP | Some Multiple Testing Procedures |
| SOMEnv | SOM Algorithm for the Analysis of Multivariate Environmental Data |
| sommer | Solving Mixed Model Equations in R |
| sonar | Fundamental Formulas for Sonar |
| SongEvo | An Individual-Based Model of Bird Song Evolution |
| sonicLength | Estimating Abundance of Clones from DNA Fragmentation Data |
| sonicscrewdriver | Bioacoustic Analysis and Publication Tools |
| sonify | Data Sonification - Turning Data into Sound |
| soobench | Single Objective Optimization Benchmark Functions |
| SOP | Generalised Additive P-Spline Regression Models Estimation |
| SOPC | The Sparse Online Principal Component Estimation Algorithm |
| SOPIE | Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar |
| soptdmaeA | Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments |
| soql | Helps Make Socrata Open Data API Calls |
| SOR | Estimation using Sequential Offsetted Regression |
| sorcering | Soil Organic Carbon and CN Ratio Driven Nitrogen Modelling Framework |
| sorocs | A Bayesian Semiparametric Approach to Correlated ROC Surfaces |
| SorptionAnalysis | Static Adsorption Experiment Plotting and Analysis |
| sortable | Drag-and-Drop in 'shiny' Apps with 'SortableJS' |
| SortedEffects | Estimation and Inference Methods for Sorted Causal Effects and Classification Analysis |
| sorvi | Functions for Finnish Open Data |
| sos | Search Contributed R Packages, Sort by Package |
| sotkanet | Sotkanet Open Data Access and Analysis |
| sotu | United States Presidential State of the Union Addresses |
| sound | A Sound Interface for R |
| soundClass | Sound Classification Using Convolutional Neural Networks |
| soundcorrs | Semi-Automatic Analysis of Sound Correspondences |
| soundecology | Soundscape Ecology |
| SoundexBR | Phonetic-Coding for Portuguese |
| soundgen | Sound Synthesis and Acoustic Analysis |
| SoundShape | Sound Waves Onto Morphometric Data |
| SoupX | Single Cell mRNA Soup eXterminator |
| SourceSet | A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways |
| sourcetools | Tools for Reading, Tokenizing and Parsing R Code |
| sovereign | State-Dependent Empirical Analysis |
| SoyNAM | Soybean Nested Association Mapping Dataset |
| SoyURT | USDA Northern Region Uniform Soybean Tests Dataset |
| sp | Classes and Methods for Spatial Data |
| SP2000 | Catalogue of Life Toolkit |
| sp23design | Design and Simulation of Seamless Phase II-III Clinical Trials |
| spaa | SPecies Association Analysis |
| SpaCCr | Spatial Convex Clustering |
| spacefillr | Space-Filling Random and Quasi-Random Sequences |
| spacejamr | Simulate Spatial Bernoulli Networks |
| spaceNet | Latent Space Models for Multidimensional Networks |
| spacesRGB | Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ |
| spacesXYZ | CIE XYZ and some of Its Derived Color Spaces |
| spacetime | Classes and Methods for Spatio-Temporal Data |
| SpaceTimeBSS | Blind Source Separation for Multivariate Spatio-Temporal Data |
| spacyr | Wrapper to the 'spaCy' 'NLP' Library |
| SPADAR | Spherical Projections of Astronomical Data |
| spAddins | A Set of RStudio Addins |
| SpadeR | Species-Richness Prediction and Diversity Estimation with R |
| SpaDES | Develop and Run Spatially Explicit Discrete Event Simulation Models |
| SpaDES.addins | Development Tools for 'SpaDES' and 'SpaDES' Modules |
| SpaDES.core | Core Utilities for Developing and Running Spatially Explicit Discrete Event Models |
| SpaDES.tools | Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models |
| spaero | Software for Project AERO |
| spam | SPArse Matrix |
| spam64 | 64-Bit Extension of the SPArse Matrix R Package 'spam' |
| spaMM | Mixed-Effect Models, with or without Spatial Random Effects |
| spamtree | Spatial Multivariate Trees |
| spanish | Translate Quantities from Strings to Integer and Back. Misc Functions on Spanish Data |
| spant | MR Spectroscopy Analysis Tools |
| sparcl | Perform Sparse Hierarchical Clustering and Sparse K-Means Clustering |
| spark.sas7bdat | Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark' |
| sparkavro | Load Avro file into 'Apache Spark' |
| sparkbq | Google 'BigQuery' Support for 'sparklyr' |
| sparkhail | A 'Sparklyr' Extension for 'Hail' |
| sparkline | 'jQuery' Sparkline 'htmlwidget' |
| sparklyr | R Interface to Apache Spark |
| sparklyr.flint | Sparklyr Extension for 'Flint' |
| sparklyr.nested | A 'sparklyr' Extension for Nested Data |
| sparktex | Generate LaTeX sparklines in R |
| sparktf | Interface for 'TensorFlow' 'TFRecord' Files with 'Apache Spark' |
| sparkwarc | Load WARC Files into Apache Spark |
| sparkxgb | Interface for 'XGBoost' on 'Apache Spark' |
| sparr | Spatial and Spatiotemporal Relative Risk |
| sparrpowR | Power Analysis to Detect Spatial Relative Risk Clusters |
| sparseBC | Sparse Biclustering of Transposable Data |
| SparseBiplots | 'HJ-Biplot' using Different Ways of Penalization Plotting with 'ggplot2' |
| sparsebnUtils | Utilities for Learning Sparse Bayesian Networks |
| SparseDC | Implementation of SparseDC Algorithm |
| sparsediscrim | Sparse and Regularized Discriminant Analysis |
| sparseEigen | Computation of Sparse Eigenvectors of a Matrix |
| SparseFactorAnalysis | Scaling Count and Binary Data with Sparse Factor Analysis |
| sparseFLMM | Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data |
| sparseGAM | Sparse Generalized Additive Models |
| sparsegl | Sparse Group Lasso |
| SparseGrid | Sparse grid integration in R |
| sparseHessianFD | Numerical Estimation of Sparse Hessians |
| sparseIndexTracking | Design of Portfolio of Stocks to Track an Index |
| sparseinv | Computation of the Sparse Inverse Subset |
| sparseLDA | Sparse Discriminant Analysis |
| SparseLPM | The Sparse Latent Position Model for Nonnegative Interaction Data |
| sparseLRMatrix | Represent and Use Sparse + Low Rank Matrices |
| sparseLTSEigen | RcppEigen back end for sparse least trimmed squares regression |
| SparseM | Sparse Linear Algebra |
| sparseMatEst | Sparse Matrix Estimation and Inference |
| SparseMDC | Implementation of SparseMDC Algorithm |
| SPARSEMODr | SPAtial Resolution-SEnsitive Models of Outbreak Dynamics |
| SparseMSE | 'Multiple Systems Estimation for Sparse Capture Data' |
| sparseMVN | Multivariate Normal Functions for Sparse Covariance and Precision Matrices |
| sparsenet | Fit Sparse Linear Regression Models via Nonconvex Optimization |
| sparsepca | Sparse Principal Component Analysis (SPCA) |
| sparsepp | 'Rcpp' Interface to 'sparsepp' |
| sparsereg | Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data |
| sparsestep | SparseStep Regression |
| sparsesvd | Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') |
| sparseSVM | Solution Paths of Sparse High-Dimensional Support Vector Machine with Lasso or Elastic-Net Regularization |
| SparseTSCGM | Sparse Time Series Chain Graphical Models |
| sparsevar | Sparse VAR/VECM Models Estimation |
| sparsevb | Spike-and-Slab Variational Bayes for Linear and Logistic Regression |
| SparseVFC | Sparse Vector Field Consensus for Vector Field Learning |
| sparsio | I/O Operations with Sparse Matrices |
| sparta | Sparse Tables |
| SPARTAAS | Statistical Methods for Archaeology |
| SPAS | Stratified-Petersen Analysis System |
| spass | Study Planning and Adaptation of Sample Size |
| SpatEntropy | Spatial Entropy Measures |
| SPAtest | Score Test and Meta-Analysis Based on Saddlepoint Approximation |
| spatgeom | Geometric Spatial Point Analysis |
| spatgraphs | Graph Edge Computations for Spatial Point Patterns |
| spathial | Evolutionary Analysis |
| spatial | Functions for Kriging and Point Pattern Analysis |
| SpatialAcc | Spatial Accessibility Measures |
| SpatialBSS | Blind Source Separation for Multivariate Spatial Data |
| spatialCovariance | Computation of Spatial Covariance Matrices for Data on Rectangles |
| spatialEco | Spatial Analysis and Modelling Utilities |
| SpatialEpi | Methods and Data for Spatial Epidemiology |
| SpatialExtremes | Modelling Spatial Extremes |
| spatialfusion | Multivariate Analysis of Spatial Data Using a Unifying Spatial Fusion Framework |
| SpatialGEV | Fit Spatial Generalized Extreme Value Models |
| SpatialGraph | SpatialGraph Class |
| SpatialKDE | Kernel Density Estimation for Spatial Data |
| SpatialKWD | Spatial KWD for Large Spatial Maps |
| SpatialML | Spatial Machine Learning |
| SpatialNP | Multivariate Nonparametric Methods Based on Spatial Signs and Ranks |
| SpatialPOP | Generation of Spatial Data with Spatially Varying Model Parameter |
| SpatialPosition | Spatial Position Models |
| spatialprobit | Spatial Probit Models |
| spatialreg | Spatial Regression Analysis |
| SpatialRegimes | Spatial Constrained Clusterwise Regression |
| spatialRF | Easy Spatial Modeling with Random Forest |
| spatialrisk | Calculating Spatial Risk |
| SpatialRoMLE | Robust Maximum Likelihood Estimation for Spatial Error Model |
| spatialsample | Spatial Resampling Infrastructure |
| spatialTIME | Spatial Analysis of Vectra Immunoflourescent Data |
| SpatialTools | Tools for Spatial Data Analysis |
| SpatialVS | Spatial Variable Selection |
| SpatialVx | Spatial Forecast Verification |
| spatialwarnings | Spatial Early Warning Signals of Ecosystem Degradation |
| spatialwidget | Formats Spatial Data for Use in Htmlwidgets |
| spatPomp | Inference for Spatiotemporal Partially Observed Markov Processes |
| SpATS | Spatial Analysis of Field Trials with Splines |
| spatsoc | Group Animal Relocation Data by Spatial and Temporal Relationship |
| spatstat | Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
| spatstat.core | Core Functionality of the 'spatstat' Family |
| spatstat.data | Datasets for 'spatstat' Family |
| spatstat.geom | Geometrical Functionality of the 'spatstat' Family |
| spatstat.gui | Interactive Graphics Functions for the 'spatstat' Package |
| spatstat.Knet | Extension to 'spatstat' for Large Datasets on a Linear Network |
| spatstat.linnet | Linear Networks Functionality of the 'spatstat' Family |
| spatstat.local | Extension to 'spatstat' for Local Composite Likelihood |
| spatstat.random | Random Generation Functionality for the 'spatstat' Family |
| spatstat.sparse | Sparse Three-Dimensional Arrays and Linear Algebra Utilities |
| spatstat.utils | Utility Functions for 'spatstat' |
| spatsurv | Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models |
| SPB | Simple Progress Bars for Procedural Coding |
| spbabel | Convert Spatial Data Using Tidy Tables |
| spBayes | Univariate and Multivariate Spatial-Temporal Modeling |
| spBayesSurv | Bayesian Modeling and Analysis of Spatially Correlated Survival Data |
| spBFA | Spatial Bayesian Factor Analysis |
| Spbsampling | Spatially Balanced Sampling |
| spc | Statistical Process Control – Calculation of ARL and Other Control Chart Performance Measures |
| spc4sts | Statistical Process Control for Stochastic Textured Surfaces |
| spcadjust | Functions for Calibrating Control Charts |
| SPCALDA | A New Reduced-Rank Linear Discriminant Analysis Method |
| SPCAvRP | Sparse Principal Component Analysis via Random Projections (SPCAvRP) |
| SPCDAnalyze | Design and Analyze Studies using the Sequential Parallel Comparison Design |
| SPCompute | Compute Power or Sample Size for GWAS with Covariate Effect |
| spcosa | Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata |
| spCP | Spatially Varying Change Points |
| spd | Semi Parametric Distribution |
| spData | Datasets for Spatial Analysis |
| spDates | Analysis of Spatial Gradients in Radiocarbon Dates |
| spdep | Spatial Dependence: Weighting Schemes, Statistics |
| spdownscale | Spatial Downscaling Using Bias Correction Approach |
| spdplyr | Data Manipulation Verbs for the Spatial Classes |
| spduration | Split-Population Duration (Cure) Regression |
| spdynmod | Spatio-Dynamic Wetland Plant Communities Model |
| speakr | A Wrapper for the Phonetic Software 'Praat' |
| speaq | Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations |
| spearmanCI | Jackknife Euclidean / Empirical Likelihood Inference for Spearman's Rho |
| spec | A Data Specification Format and Interface |
| SpecDetec | Change Points Detection with Spectral Clustering |
| SpecHelpers | Spectroscopy Related Utilities |
| SPECIES | Statistical Package for Species Richness Estimation |
| specklestar | Reduction of Speckle Data from BTA 6-m Telescope |
| specr | Conducting and Visualizing Specification Curve Analyses |
| specs | Single-Equation Penalized Error-Correction Selector (SPECS) |
| SpecsVerification | Forecast Verification Routines for Ensemble Forecasts of Weather and Climate |
| spectacles | Storing, Manipulating and Analysis Spectroscopy and Associated Data |
| spectator | Interface to the 'Spectator Earth' API |
| spectr | Calculate the Periodogram of a Time-Course |
| spectral | Common Methods of Spectral Data Analysis |
| spectralAnalysis | Pre-Process, Visualize and Analyse Process Analytical Data, by Spectral Data Measurements Made During a Chemical Process |
| spectralGP | Approximate Gaussian Processes Using the Fourier Basis |
| spectralGraphTopology | Learning Graphs from Data via Spectral Constraints |
| SpectralMap | Diffusion Map and Spectral Map |
| spectralR | Obtain and Visualize Spectral Reflectance Data for Earth Surface Polygons |
| spectre | Predict Regional Community Composition |
| spectrino | Spectra Viewer, Organizer, Data Preparation and Property Blocks |
| spectrolab | Class and Methods for Spectral Data |
| Spectrum | Fast Adaptive Spectral Clustering for Single and Multi-View Data |
| SPEDInstabR | Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept |
| speech | Legislative Speeches |
| speechbr | Access the Speechs and Speaker's Informations of House of Representatives of Brazil |
| speedglm | Fitting Linear and Generalized Linear Models to Large Data Sets |
| speedycode | Automate Code for Adding Labels, Recoding and Renaming Variables, and Converting ASCII Files |
| spef | Semiparametric Estimating Functions |
| speff2trial | Semiparametric Efficient Estimation for a Two-Sample Treatment Effect |
| SPEI | Calculation of the Standardised Precipitation-Evapotranspiration Index |
| spellcheckr | Correct the Spelling of a Given Word in the English Language |
| spelling | Tools for Spell Checking in R |
| spemd | A Bi-Dimensional Implementation of the Empirical Mode Decomposition for Spatial Data |
| sperich | Auxiliary Functions to Estimate Centers of Biodiversity |
| sperrorest | Perform Spatial Error Estimation and Variable Importance Assessment |
| spex | Spatial Extent Tools |
| spfda | Function-on-Scalar Regression with Group-Bridge Penalty |
| spfilteR | Semiparametric Spatial Filtering with Eigenvectors in (Generalized) Linear Models |
| spflow | Spatial Econometric Interaction Models |
| spFSR | Feature Selection and Ranking by Simultaneous Perturbation Stochastic Approximation |
| spFW | Hierarchical Spatial Finlay-Wilkinson Model |
| spGARCH | Spatial ARCH and GARCH Models (spGARCH) |
| spgs | Statistical Patterns in Genomic Sequences |
| spgwr | Geographically Weighted Regression |
| SphereOptimize | Optimization on a Unit Sphere |
| spherepc | Spherical Principal Curves |
| sphereplot | Spherical Plotting |
| SphericalCubature | Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates |
| SphericalK | Spherical K-Function |
| sphet | Estimation of Spatial Autoregressive Models with and without Heteroskedastic Innovations |
| sphunif | Uniformity Tests on the Circle, Sphere, and Hypersphere |
| SPIAssay | A Genetic-Based Assay for the Identification of Cell Lines |
| spider | Species Identity and Evolution in R |
| spiderbar | Parse and Test Robots Exclusion Protocol Files and Rules |
| spidR | Spider Knowledge Online |
| SPIGA | Compute SPI Index using the Methods Genetic Algorithm and Maximum Likelihood |
| spikes | Detecting Election Fraud from Irregularities in Vote-Share Distributions |
| spikeslab | Prediction and Variable Selection Using Spike and Slab Regression |
| spikeSlabGAM | Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models |
| Spillover | Spillover Index Based on VAR Modelling |
| SPINA | Structure Parameter Inference Approach |
| spinBayes | Semi-Parametric Gene-Environment Interaction via Bayesian Variable Selection |
| spind | Spatial Methods and Indices |
| spinifex | Manual Tours, Manual Control of Dynamic Projections of Numeric Multivariate Data |
| spinyReg | Sparse Generative Model and Its EM Algorithm |
| spiR | Wrapper for the Social Progress Index Data |
| spiralize | Visualize Data on Spirals |
| spiritR | Template for Clinical Trial Protocol |
| splancs | Spatial and Space-Time Point Pattern Analysis |
| splash | Simple Process-Led Algorithms for Simulating Habitats |
| spldv | Spatial Models for Limited Dependent Variables |
| SPLICE | Synthetic Paid Loss and Incurred Cost Experience (SPLICE) Simulator |
| splines2 | Regression Spline Functions and Classes |
| splinetree | Longitudinal Regression Trees and Forests |
| Splinets | Functional Data Analysis using Splines and Orthogonal Spline Bases |
| SPlit | Split a Dataset for Training and Testing |
| splitFeas | Multi-Set Split Feasibility |
| splitfngr | Combined Evaluation and Split Access of Functions |
| SplitGLM | Split Generalized Linear Models |
| splithalf | Calculate Task Split Half Reliability Estimates |
| splithalfr | Estimate Split-Half Reliabilities |
| SplitKnockoff | Split Knockoffs for Structural Sparsity |
| SplitReg | Split Regularized Regression |
| splitSelect | Best Split Selection Modeling for Low-Dimensional Data |
| SplitSoftening | Softening Splits in Decision Trees |
| splitstackshape | Stack and Reshape Datasets After Splitting Concatenated Values |
| splitTools | Tools for Data Splitting |
| splm | Econometric Models for Spatial Panel Data |
| splmm | Simultaneous Penalized Linear Mixed Effects Models |
| splot | Split Plot |
| spls | Sparse Partial Least Squares (SPLS) Regression and Classification |
| splus2R | Supplemental S-PLUS Functionality in R |
| splusTimeDate | Times and Dates from S-PLUS |
| splusTimeSeries | Time Series from S-PLUS |
| splutil | Utility Functions for Common Base-R Problems Relating to Lists |
| spm | Spatial Predictive Modeling |
| spm2 | Spatial Predictive Modeling |
| spMaps | Europe SpatialPolygonsDataFrame Builder |
| spMC | Continuous-Lag Spatial Markov Chains |
| SPmlficmcm | Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs |
| spmodel | Spatial Statistical Modeling and Prediction |
| spmoran | Fast Spatial Regression using Moran Eigenvectors |
| spnaf | Spatial Network Autocorrelation for Flow Data |
| spnet | Plotting (Social) Networks on Maps |
| SpNetPrep | Linear Network Preprocessing for Spatial Statistics |
| spNetwork | Spatial Analysis on Network |
| SpNMF | Supervised NMF |
| spnn | Scale Invariant Probabilistic Neural Networks |
| spNNGP | Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes |
| spocc | Interface to Species Occurrence Data Sources |
| spOccupancy | Single-Species, Multi-Species, and Integrated Spatial Occupancy Models |
| spoiler | Blur 'HTML' Elements in 'Shiny' Applications Using 'Spoiler-Alert.js' |
| spongebob | SpongeBob-Case Converter : spOngEboB-CASe CoNVertER |
| spongecake | Transform a Movie into a Synthetic Picture |
| spooky | Time Feature Extrapolation Using Spectral Analysis and Jack-Knife Resampling |
| spork | Generalized Label Formatting |
| sport | Sequential Pairwise Online Rating Techniques |
| SPORTSCausal | Spillover Time Series Causal Inference |
| SportsTour | Display Tournament Fixtures using Knock Out and Round Robin Techniques |
| sportyR | Plot Scaled 'ggplot' Representations of Sports Playing Surfaces |
| SPOT | Sequential Parameter Optimization Toolbox |
| spotGUI | Graphical User Interface for the Package 'SPOT' |
| spotidy | Providing Convenience Functions to Connect R with the Spotify API |
| spotifyr | R Wrapper for the 'Spotify' Web API |
| SPOTMisc | Misc Extensions for the 'SPOT' Package |
| spotoroo | Spatiotemporal Clustering of Satellite Hot Spot Data |
| spots | Spatial Component Analysis |
| SpotSampling | SPatial and Optimally Temporal (SPOT) Sampling |
| SPOUSE | Scatter Plots Over-Viewed Using Summary Ellipses |
| spp | ChIP-Seq Processing Pipeline |
| SPPcomb | Combining Different Spatial Datasets in Cancer Risk Estimation |
| spqdep | Testing for Spatial Independence of Qualitative Data in Cross Section |
| SPQR | Semi-Parametric Quantile Regression |
| spray | Sparse Arrays and Multivariate Polynomials |
| spreadr | Simulating Spreading Activation in a Network |
| SPREDA | Statistical Package for Reliability Data Analysis |
| SPreg | Bias Reduction in the Skew-Probit Model for a Binary Response |
| spreval | Evaluation of Sprinkler Irrigation Uniformity and Efficiency |
| sprex | Calculate Species Richness and Extrapolation Metrics |
| springer | Sparse Group Variable Selection for Gene-Environment Interactions in the Longitudinal Study |
| springpheno | Spring Phenological Indices |
| spRingsteen | All Things Data and Springsteen |
| sprintr | Sparse Reluctant Interaction Modeling |
| sprtt | Sequential Probability Ratio Tests: Using t-Statistic |
| spruce | Spatial Random Effects Clustering of Single Cell Data |
| sps | Sequential Poisson Sampling |
| spsComps | 'systemPipeShiny' UI and Server Components |
| spselect | Selecting Spatial Scale of Covariates in Regression Models |
| spsh | Estimation and Prediction of Parameters of Various Soil Hydraulic Property Models |
| spsi | Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation |
| SPSL | Site Percolation on Square Lattices (SPSL) |
| SPSP | Selection by Partitioning the Solution Paths |
| spsur | Spatial Seemingly Unrelated Regression Models |
| spsurv | Bernstein Polynomial Based Semiparametric Survival Analysis |
| spsurvey | Spatial Sampling Design and Analysis |
| spsUtil | 'systemPipeShiny' Utility Functions |
| spt | Sierpinski Pedal Triangle |
| spTDyn | Spatially Varying and Spatio-Temporal Dynamic Linear Models |
| spThin | Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models |
| spTimer | Spatio-Temporal Bayesian Modelling |
| sptm | SemiParametric Transformation Model Methods |
| sptotal | Predicting Totals and Weighted Sums from Spatial Data |
| spup | Spatial Uncertainty Propagation Analysis |
| spuRs | Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R" |
| SPUTNIK | SPatially aUTomatic deNoising for Ims toolKit |
| SPYvsSPY | Spy vs. Spy Data |
| sqldf | Manipulate R Data Frames Using SQL |
| sqliter | Connection wrapper to SQLite databases |
| sqliteutils | Utility Functions for 'SQLite' |
| sqlparseR | Wrapper for 'Python' Module 'sqlparse': Parse, Split, and Format 'SQL' |
| SqlRender | Rendering Parameterized SQL and Translation to Dialects |
| sqlscore | Utilities for Generating SQL Queries from Model Objects |
| SQN | Subset Quantile Normalization |
| SQRL | Facilitates ODBC Database Interaction |
| squant | Subgroup Identification Based on Quantitative Objectives |
| SQUAREM | Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms |
| squash | Color-Based Plots for Multivariate Visualization |
| squashinformr | Politely Web Scrape Data from SquashInfo |
| SqueakR | An Experiment Interface for 'DeepSqueak' Bioacoustics Research |
| squeezy | Group-Adaptive Elastic Net Penalised Generalised Linear Models |
| squid | Statistical Quantification of Individual Differences |
| sra | Selection Response Analysis |
| srcr | Simplify Connections to Database Sources |
| SRCS | Statistical Ranking Color Scheme for Multiple Pairwise Comparisons |
| sRDA | Sparse Redundancy Analysis |
| sRdpData | Strategies of Resistance Data Project |
| sregsurvey | Semiparametric Model-Assisted Estimation in Finite Populations |
| srm | Structural Equation Modeling for the Social Relations Model |
| sRNAGenetic | Analysis of Small RNA Expression Changes in Hybrid Plants |
| srp | Smooth-Rough Partitioning of the Regression Coefficients |
| SRS | Scaling with Ranked Subsampling |
| srt | Read Subtitle Files as Tabular Data |
| SRTsim | Simulator for Spatially Resolved Transcriptomics |
| SRTtools | Adjust Srt File to Get Better Experience when Watching Movie |
| srvyr | 'dplyr'-Like Syntax for Summary Statistics of Survey Data |
| ss3sim | Fisheries Stock Assessment Simulation Testing with Stock Synthesis |
| ssaBSS | Stationary Subspace Analysis |
| ssanv | Sample Size Adjusted for Nonadherence or Variability of Input Parameters |
| SSBtools | Statistics Norway's Miscellaneous Tools |
| ssc | Semi-Supervised Classification Methods |
| sscor | Robust Correlation Estimation and Testing Based on Spatial Signs |
| ssddata | Species Sensitivity Distribution Data |
| SSDforR | Functions to Analyze Single System Data |
| SSDL | Sketched Stochastic Dictionary Learning |
| SSDM | Stacked Species Distribution Modelling |
| sSDR | Tools Developed for Structured Sufficient Dimension Reduction (sSDR) |
| ssdtools | Species Sensitivity Distributions |
| sse | Sample Size Estimation |
| ssev | Sample Size Computation for Fixed N with Optimal Reward |
| ssfa | Spatial Stochastic Frontier Analysis |
| ssfit | Fitting of Parametric Models using Summary Statistics |
| ssgraph | Bayesian Graph Structure Learning using Spike-and-Slab Priors |
| ssh | Secure Shell (SSH) Client for R |
| SSHAARP | Searching Shared HLA Amino Acid Residue Prevalence |
| Sshaped | Nonparametric, Tuning-Free Estimation of S-Shaped Functions |
| sship | Tool for Secure Shipment of Content |
| ssimparser | Standard Schedules Information Parser |
| ssize.fdr | Sample Size Calculations for Microarray Experiments |
| ssizeRNA | Sample Size Calculation for RNA-Seq Experimental Design |
| SSLASSO | The Spike-and-Slab LASSO |
| SSLR | Semi-Supervised Classification, Regression and Clustering Methods |
| SSM | Fit and Analyze Smooth Supersaturated Models |
| ssmn | Skew Scale Mixtures of Normal Distributions |
| ssMousetrack | Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan |
| ssmrob | Robust Estimation and Inference in Sample Selection Models |
| ssmsn | Scale-Shape Mixtures of Skew-Normal Distributions |
| SSN | Spatial Modeling on Stream Networks |
| SSNbayes | Bayesian Spatio-Temporal Analysis in Stream Networks |
| SSOSVM | Stream Suitable Online Support Vector Machines |
| SSP | Simulated Sampling Procedure for Community Ecology |
| sspm | Spatial Surplus Production Model Framework for Northern Shrimp Populations |
| sspse | Estimating Hidden Population Size using Respondent Driven Sampling Data |
| ssr | Semi-Supervised Regression Methods |
| SSRA | Sakai Sequential Relation Analysis |
| SSrat | Two-Dimensional Sociometric Status Determination with Rating Scales |
| ssrm.logmer | Sample Size Determination for Longitudinal Designs with Binary Outcome |
| SSRMST | Sample Size Calculation using Restricted Mean Survival Time |
| ssrn | Scan Statistics for Railway Network |
| SSRTcalc | Easy SSRT Calculation |
| sss | Import Files in the Triple-s (Standard Survey Structure) Format |
| sssc | Same Species Sample Contamination Detection |
| SSsimple | State Space Models |
| Sstack | Bootstrap Stacking of Random Forest Models for Heterogeneous Data |
| SSVS | Functions for Stochastic Search Variable Selection (SSVS) |
| ssym | Fitting Semi-Parametric log-Symmetric Regression Models |
| st | Shrinkage t Statistic and Correlation-Adjusted t-Score |
| sta | Seasonal Trend Analysis for Time Series Imagery in R |
| stabiliser | Stabilising Variable Selection |
| stability | Stability Analysis of Genotype by Environment Interaction (GEI) |
| StabilizedRegression | Stabilizing Regression and Variable Selection |
| stable | Probability Functions and Generalized Regression Models for Stable Distributions |
| stabledist | Stable Distribution Functions |
| StableEstim | Estimate the Four Parameters of Stable Laws using Different Methods |
| stableGR | A Stable Gelman-Rubin Diagnostic for Markov Chain Monte Carlo |
| stablelearner | Stability Assessment of Statistical Learning Methods |
| stablespec | Stable Specification Search in Structural Equation Models |
| stabm | Stability Measures for Feature Selection |
| stabreg | Linear Regression with the Stable Distribution |
| stabs | Stability Selection with Error Control |
| StackImpute | Tools for Analysis of Stacked Multiple Imputations |
| stackoverflow | Stack Overflow's Greatest Hits |
| stacks | Tidy Model Stacking |
| stacomiR | Fish Migration Monitoring |
| stacomirtools | Connection Class for Package stacomiR |
| stagedtrees | Staged Event Trees |
| stagePop | Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time |
| staggered | Efficient Estimation Under Staggered Treatment Timing |
| StakeholderAnalysis | Measuring Stakeholder Influence |
| StAMPP | Statistical Analysis of Mixed Ploidy Populations |
| stampr | Spatial Temporal Analysis of Moving Polygons |
| stan4bart | Bayesian Additive Regression Trees with Stan-Sampled Parametric Extensions |
| STAND | Statistical Analysis of Non-Detects |
| standardize | Tools for Standardizing Variables for Regression in R |
| standartox | Ecotoxicological Information from the Standartox Database |
| stanette | R Interface to Stan |
| StanHeaders | C++ Header Files for Stan |
| StanMoMo | Bayesian Mortality Modelling with 'Stan' |
| stapler | Simultaneous Truth and Performance Level Estimation |
| staplr | A Toolkit for PDF Files |
| staRdom | PARAFAC Analysis of EEMs from DOM |
| stargazer | Well-Formatted Regression and Summary Statistics Tables |
| starm | Spatio-Temporal Autologistic Regression Model |
| starma | Modelling Space Time AutoRegressive Moving Average (STARMA) Processes |
| starnet | Stacked Elastic Net |
| stars | Spatiotemporal Arrays, Raster and Vector Data Cubes |
| starschemar | Obtaining Star Schemas from Flat Tables |
| starsExtra | Miscellaneous Functions for Working with 'stars' Rasters |
| starsTileServer | A Dynamic Tile Server for R |
| STARTdesign | Single to Double Arm Transition Design for Phase II Clinical Trials |
| starter | Starter Kit for New Projects |
| starticles | A Generic, Publisher-Independent Template for Writing Scientific Documents in 'rmarkdown' |
| startR | Automatically Retrieve Multidimensional Distributed Data Sets |
| STARTS | Functions for the STARTS Model |
| startup | Friendly R Startup Configuration |
| startupmsg | Utilities for Start-Up Messages |
| starvars | Vector Logistic Smooth Transition Models Estimation and Prediction |
| starvz | R-Based Visualization Techniques for Task-Based Applications |
| starwarsdb | Relational Data from the 'Star Wars' API for Learning and Teaching |
| STAT | Interactive Document for Working with Basic Statistical Analysis |
| stat.extend | Highest Density Regions and Other Functions of Distributions |
| STAT2 | Interactive Document for Working with Basic Statistical Analysis |
| Stat2Data | Datasets for Stat2 |
| statar | Tools Inspired by 'Stata' to Manipulate Tabular Data |
| statBasics | Basic Functions to Statistical Methods Course |
| statcanR | Client for Statistics Canada's Open Economic Data |
| statcheck | Extract Statistics from Articles and Recompute p Values |
| statcodelists | Use Standardized Statistical Codelists |
| statcomp | Statistical Complexity and Information Measures for Time Series Analysis |
| StatDataML | Read and Write StatDataML Files |
| statebins | Create United States Uniform Cartogram Heatmaps |
| states | Create Panels of Independent States |
| statespacer | State Space Modelling in 'R' |
| statgenGWAS | Genome Wide Association Studies |
| statgenGxE | Genotype by Environment (GxE) Analysis |
| statgenHTP | High Throughput Phenotyping (HTP) Data Analysis |
| statgenIBD | Calculation of IBD Probabilities |
| statgenMPP | QTL Mapping for Multi Parent Populations |
| statgenSTA | Single Trial Analysis (STA) of Field Trials |
| statGraph | Statistical Methods for Graphs |
| stationaRy | Detailed Meteorological Data from Stations All Over the World |
| stationery | Working Examples for Reproducible Research Documents |
| statip | Statistical Functions for Probability Distributions and Regression |
| statisfactory | Statistical and Geometrical Tools |
| StatMatch | Statistical Matching or Data Fusion |
| statmod | Statistical Modeling |
| statnet | Software Tools for the Statistical Analysis of Network Data |
| statnet.common | Common R Scripts and Utilities Used by the Statnet Project Software |
| statnetWeb | A Graphical User Interface for Network Modeling with 'Statnet' |
| statnipokladna | Use Data from the Czech Public Finance Database |
| StatPerMeCo | Statistical Performance Measures to Evaluate Covariance Matrix Estimates |
| statprograms | Graduate Statistics Program Datasets |
| statpsych | Statistical Methods for Psychologists |
| statquotes | Quotes on Statistics, Data Visualization and Science |
| StatRank | Statistical Rank Aggregation: Inference, Evaluation, and Visualization |
| stats19 | Work with Open Road Traffic Casualty Data from Great Britain |
| statsearchanalyticsr | An Interface for the 'STAT Search Analytics' 'API' |
| statsExpressions | Tidy Dataframes and Expressions with Statistical Details |
| Statsomat | Shiny Apps for Automated Data Analysis and Automated Interpretation |
| statsr | Companion Software for the Coursera Statistics with R Specialization |
| statswalesr | Easily Extract Data from 'StatsWales' |
| statVisual | Statistical Visualization Tools |
| STB | Simultaneous Tolerance Bounds |
| stcos | Space-Time Change of Support |
| stcov | Stein's Covariance Estimator |
| stddiff | Calculate the Standardized Difference for Numeric, Binary and Category Variables |
| stdmod | Standardized Moderation Effect and Its Confidence Interval |
| stdReg | Regression Standardization |
| stdvectors | C++ Standard Library Vectors in R |
| steadyICA | ICA and Tests of Independence via Multivariate Distance Covariance |
| steepness | Testing Steepness of Dominance Hierarchies |
| SteinerNet | Steiner Tree Approach for Graph Analysis |
| SteinIV | Semi-Parametric Stein-Like Estimator with Instrumental Variables |
| stellaR | Evolutionary Tracks and Isochrones from Pisa Stellar Evolution Database |
| stemmatology | Stemmatological Analysis of Textual Traditions |
| StempCens | Spatio-Temporal Estimation and Prediction for Censored/Missing Responses |
| stencilaschema | Bindings for Stencila Schema |
| StepBeta | Stepwise Procedure for Beta, Beta-Binomial and Negative Binomial Regression Models |
| STEPCAM | ABC-SMC Inference of STEPCAM |
| stepdownfdp | A Step-Down Procedure to Control the False Discovery Proportion |
| stepgbm | Stepwise Variable Selection for Generalized Boosted Regression Modeling |
| stepjglm | Variable Selection for Joint Modeling of Mean and Dispersion |
| stepp | Subpopulation Treatment Effect Pattern Plot (STEPP) |
| SteppedPower | Power Calculation for Stepped Wedge Designs |
| stepPenal | Stepwise Forward Variable Selection in Penalized Regression |
| stepPlr | L2 Penalized Logistic Regression with Stepwise Variable Selection |
| stepR | Multiscale Change-Point Inference |
| StepReg | Stepwise Regression Analysis |
| steprf | Stepwise Predictive Variable Selection for Random Forest |
| steps | Spatially- and Temporally-Explicit Population Simulator |
| StepSignalMargiLike | Step-Wise Signal Extraction via Marginal Likelihood |
| stepSplitReg | Stepwise Split Regularized Regression |
| StepwiseTest | Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion |
| StereoMorph | Stereo Camera Calibration and Reconstruction |
| stevedata | Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics |
| stevedore | Docker Client |
| stevemisc | Steve's Miscellaneous Functions |
| stevetemplates | Steve's R Markdown Templates |
| stfit | Spatio-Temporal Functional Imputation Tool |
| STFTS | Statistical Tests for Functional Time Series |
| STGS | Genomic Selection using Single Trait |
| STI | Calculation of the Standardized Temperature Index |
| stickr | View and Use R Hex Stickers |
| sticky | Persist Attributes Across Data Operations |
| stilt | Separable Gaussian Process Interpolation (Emulation) |
| stima | Simultaneous Threshold Interaction Modeling Algorithm |
| stinepack | Stineman, a Consistently Well Behaved Method of Interpolation |
| stlARIMA | STL Decomposition and ARIMA Hybrid Forecasting Model |
| stlELM | Hybrid Forecasting Model Based on STL Decomposition and ELM |
| stlnpp | Spatio-Temporal Analysis of Point Patterns on Linear Networks |
| stlplus | Enhanced Seasonal Decomposition of Time Series by Loess |
| stlTDNN | STL Decomposition and TDNN Hybrid Time Series Forecasting |
| stm | Estimation of the Structural Topic Model |
| stmCorrViz | A Tool for Structural Topic Model Visualizations |
| STMedianPolish | Spatio-Temporal Median Polish |
| stmgp | Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data |
| stmgui | Shiny Application for Creating STM Models |
| stminsights | A 'Shiny' Application for Inspecting Structural Topic Models |
| StMoMo | Stochastic Mortality Modelling |
| StMoSim | Quantile-Quantile Plot with Several Gaussian Simulations |
| STMotif | Discovery of Motifs in Spatial-Time Series |
| STMr | Strength Training Manual R-Language Functions |
| stocc | Fit a Spatial Occupancy Model via Gibbs Sampling |
| stochprofML | Stochastic Profiling using Maximum Likelihood Estimation |
| stochQN | Stochastic Limited Memory Quasi-Newton Optimizers |
| stochvol | Efficient Bayesian Inference for Stochastic Volatility (SV) Models |
| stochvolTMB | Likelihood Estimation of Stochastic Volatility Models |
| stockfish | Analyze Chess Games with the 'Stockfish' Engine |
| stockR | Identifying Stocks in Genetic Data |
| stocks | Stock Market Analysis |
| stoichcalc | R Functions for Solving Stoichiometric Equations |
| stokes | The Exterior Calculus |
| STOPES | Selection Threshold Optimized Empirically via Splitting |
| stoppingrule | Create and Evaluate Stopping Rules |
| stopwords | Multilingual Stopword Lists |
| Storm | Write Storm Bolts in R using the Storm Multi-Language Protocol |
| storr | Simple Key Value Stores |
| stortingscrape | Access Data from the Norwegian Parliament API |
| stoRy | Download, Explore, and Analyze Literary Theme Ontology Data |
| storywranglr | Explore Twitter Trends with the 'Storywrangler' API |
| stosim | Stochastic Simulator for Reliability Modeling of Repairable Systems |
| STPGA | Selection of Training Populations by Genetic Algorithm |
| stplanr | Sustainable Transport Planning |
| stpm | Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes |
| stpp | Space-Time Point Pattern Simulation, Visualisation and Analysis |
| stppSim | Spatiotemporal Point Patterns Simulation |
| stR | STR Decomposition |
| str2str | Convert R Objects from One Structure to Another |
| StrainRanking | Ranking of Pathogen Strains |
| strand | A Framework for Investment Strategy Simulation |
| strap | Stratigraphic Tree Analysis for Palaeontology |
| strat | An Implementation of the Stratification Index |
| stratallo | Optimum Sample Allocation in Stratified Sampling Schemes |
| stratamatch | Stratification and Matching for Large Observational Data Sets |
| stratbr | Optimal Stratification in Stratified Sampling |
| strategicplayers | Strategic Players |
| Strategy | Generic Framework to Analyze Trading Strategies |
| stratEst | Strategy Estimation |
| StrathE2E2 | End-to-End Marine Food Web Model |
| stratification | Univariate Stratification of Survey Populations |
| StratifiedBalancing | Stratified Covariate Balancing |
| StratifiedMedicine | Stratified Medicine |
| StratifiedRF | Builds Trees by Sampling Variables in Groups |
| StratifiedSampling | Different Methods for Stratified Sampling |
| stratifyR | Optimal Stratification of Univariate Populations |
| StratigrapheR | Integrated Stratigraphy |
| StratSel | Strategic Selection Estimator |
| STraTUS | Enumeration and Uniform Sampling of Transmission Trees for a Known Phylogeny |
| stratvns | Optimal Stratification in Stratified Sampling |
| straweib | Stratified Weibull Regression Model |
| strawr | Fast Implementation of Reading/Dump for .hic Files |
| stray | Anomaly Detection in High Dimensional and Temporal Data |
| stream | Infrastructure for Data Stream Mining |
| streambugs | Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa |
| streamDepletr | Estimate Streamflow Depletion Due to Groundwater Pumping |
| StreamMetabolism | Calculate Single Station Metabolism from Diurnal Oxygen Curves |
| streamMOA | Interface for MOA Stream Clustering Algorithms |
| streamR | Access to Twitter Streaming API via R |
| stressaddition | Modelling Tri-Phasic Concentration-Response Relationships |
| stressr | Fetch and plot financial stress index and component data |
| StressStrength | Computation and Estimation of Reliability of Stress-Strength Models |
| strex | Extra String Manipulation Functions |
| strider | Strided Iterator and Range |
| String2AdjMatrix | Creates an Adjacency Matrix from a List of Strings |
| string2path | Rendering Font into 'data.frame' |
| stringb | Convenient Base R String Handling |
| stringdist | Approximate String Matching, Fuzzy Text Search, and String Distance Functions |
| stringfish | Alt String Implementation |
| stringformattr | Dynamic String Formatting |
| stringi | Fast and Portable Character String Processing Facilities |
| stringr | Simple, Consistent Wrappers for Common String Operations |
| stringx | Drop-in Replacements for Base String Functions Powered by 'stringi' |
| strip | Lighten your R Model Outputs |
| stripless | Structured Trellis Displays Without Strips for Lattice Graphics |
| striprtf | Extract Text from RTF File |
| STRMPS | Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data |
| StroupGLMM | R Codes and Datasets for Generalized Linear Mixed Models: Modern Concepts, Methods and Applications by Walter W. Stroup |
| strucchange | Testing, Monitoring, and Dating Structural Changes |
| strucchangeRcpp | Testing, Monitoring, and Dating Structural Changes: C++ Version |
| StrucDiv | Spatial Structural Diversity Quantification in Raster Data |
| StructFDR | False Discovery Control Procedure Integrating the Prior Structure Information |
| structree | Tree-Structured Clustering |
| StructureMC | Structured Matrix Completion |
| strvalidator | Process Control and Internal Validation of Forensic STR Kits |
| stuart | Subtests Using Algorithmic Rummaging Techniques |
| studentlife | Tidy Handling and Navigation of the Student-Life Dataset |
| studyStrap | Study Strap and Multi-Study Learning Algorithms |
| STV | Single Transferable Vote Counting |
| styler | Non-Invasive Pretty Printing of R Code |
| stylest | Estimating Speaker Style Distinctiveness |
| stylo | Stylometric Multivariate Analyses |
| subcopem2D | Bivariate Empirical Subcopula |
| SubCultCon | Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures |
| subdetect | Detect Subgroup with an Enhanced Treatment Effect |
| subformula | Create Subformulas of a Formula |
| subgroup | Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials |
| SubgrPlots | Graphical Displays for Subgroup Analysis in Clinical Trials |
| subgxe | Combine Multiple GWAS by Using Gene-Environment Interactions |
| submax | Effect Modification in Observational Studies Using the Submax Method |
| subniche | Within Outlying Mean Indexes: Refining the OMI Analysis |
| SubpathwayLNCE | Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory |
| subplex | Unconstrained Optimization using the Subplex Algorithm |
| subrank | Computes Copula using Ranks and Subsampling |
| subsamp | Subsample Winner Algorithm for Variable Selection in Linear Regression with a Large Number of Variables |
| subscore | Computing Subscores in Classical Test Theory and Item Response Theory |
| subscreen | Systematic Screening of Study Data for Subgroup Effects |
| subselect | Selecting Variable Subsets |
| subsemble | An Ensemble Method for Combining Subset-Specific Algorithm Fits |
| subspace | Interface to OpenSubspace |
| subtee | Subgroup Treatment Effect Estimation in Clinical Trials |
| SubTite | Subgroup Specific Optimal Dose Assignment |
| SubtypeDrug | Prioritization of Candidate Cancer Subtype Specific Drugs |
| SubVis | Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices |
| success | Survival Control Charts Estimation Software |
| sudachir | R Interface to 'Sudachi' |
| suddengains | Identify Sudden Gains in Longitudinal Data |
| sudoku | Sudoku Puzzle Generator and Solver |
| sudokuAlt | Tools for Making and Spoiling Sudoku Games |
| SuessR | Suess and Laws Corrections for Marine Stable Carbon Isotope Data |
| sugarbag | Create Tessellated Hexagon Maps |
| sugrrants | Supporting Graphs for Analysing Time Series |
| sumFREGAT | Fast Region-Based Association Tests on Summary Statistics |
| summariser | Easy Calculation and Visualisation of Confidence Intervals |
| SummaryLasso | Building Polygenic Risk Score Using GWAS Summary Statistics |
| summarytools | Tools to Quickly and Neatly Summarize Data |
| SUMMER | Small-Area-Estimation Unit/Area Models and Methods for Estimation in R |
| sumR | Approximate Summation of Series |
| sumSome | Permutation True Discovery Guarantee by Sum-Based Tests |
| sunburstR | Sunburst 'Htmlwidget' |
| suncalc | Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase |
| Sunclarco | Survival Analysis using Copulas |
| sundialr | An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers |
| SUNGEO | Sub-National Geospatial Data Archive: Geoprocessing Toolkit |
| SunsVoc | Constructing Suns-Voc from Outdoor Time-Series I-V Curves |
| supc | The Self-Updating Process Clustering Algorithms |
| supclust | Supervised Clustering of Predictor Variables Such as Genes |
| supcluster | Supervised Cluster Analysis |
| superb | Summary Plots with Adjusted Error Bars |
| superbiclust | Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering) |
| supercells | Superpixels of Spatial Data |
| supercompress | Supervised Compression of Big Data |
| superdiag | A Comprehensive Test Suite for Testing Markov Chain Nonconvergence |
| SuperExactTest | Exact Test and Visualization of Multi-Set Intersections |
| SuperGauss | Superfast Likelihood Inference for Stationary Gaussian Time Series |
| superheat | A Graphical Tool for Exploring Complex Datasets Using Heatmaps |
| SuperLearner | Super Learner Prediction |
| superMICE | SuperLearner Method for MICE |
| superml | Build Machine Learning Models Like Using Python's Scikit-Learn Library in R |
| supernova | Judd, McClelland, & Ryan Formatting for ANOVA Output |
| superpc | Supervised Principal Components |
| SuperpixelImageSegmentation | Superpixel Image Segmentation |
| Superpower | Simulation-Based Power Analysis for Factorial Designs |
| SuperRanker | Sequential Rank Agreement |
| supervisedPRIM | Supervised Classification Learning and Prediction using Patient Rule Induction Method (PRIM) |
| SupMZ | Detecting Structural Change with Heteroskedasticity |
| suppdata | Downloading Supplementary Data from Published Manuscripts |
| SuppDists | Supplementary Distributions |
| support.BWS | Tools for Case 1 Best-Worst Scaling |
| support.BWS2 | Tools for Case 2 Best-Worst Scaling |
| support.BWS3 | Tools for Case 3 Best-Worst Scaling |
| support.CEs | Basic Functions for Supporting an Implementation of Choice Experiments |
| supreme | Modeling Tool for 'Shiny' Applications Developed with Modules |
| sur | Companion to "Statistics Using R: An Integrative Approach" |
| surbayes | Bayesian Analysis of Seemingly Unrelated Regression Models |
| sure | Surrogate Residuals for Ordinal and General Regression Models |
| sureLDA | A Novel Multi-Disease Automated Phenotyping Method for the EHR |
| surf | Survey-Based Gross Flows Estimation |
| SuRF.vs | Subsampling Ranking Forward Selection (SuRF) |
| surface | Fitting Hansen Models to Investigate Convergent Evolution |
| SurfaceTortoise | Find Optimal Sampling Locations Based on Spatial Covariate(s) |
| Surrogate | Evaluation of Surrogate Endpoints in Clinical Trials |
| SurrogateOutcome | Estimation of the Proportion of Treatment Effect Explained by Surrogate Outcome Information |
| SurrogateRegression | Surrogate Outcome Regression Analysis |
| SurrogateTest | Early Testing for a Treatment Effect using Surrogate Marker Information |
| surrosurvROC | Surrogate Survival ROC |
| suRtex | LaTeX descriptive statistic reporting for survey data |
| surv2sampleComp | Inference for Model-Free Between-Group Parameters for Censored Survival Data |
| survAUC | Estimators of Prediction Accuracy for Time-to-Event Data |
| survAWKMT2 | Two-Sample Tests Based on Differences of Kaplan-Meier Curves |
| survBootOutliers | Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis |
| survC1 | C-Statistics for Risk Prediction Models with Censored Survival Data |
| survCurve | Plots Survival Curves Element by Element |
| SurvDisc | Discrete Time Survival and Longitudinal Data Analysis |
| surveil | Time Series Models for Disease Surveillance |
| surveillance | Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena |
| survELtest | Comparing Multiple Survival Functions with Crossing Hazards |
| survexp.fr | Relative Survival, AER and SMR Based on French Death Rates |
| survey | Analysis of Complex Survey Samples |
| surveybootstrap | Tools for the Bootstrap with Survey Data |
| surveyCV | Cross Validation Based on Survey Design |
| surveydata | Tools to Work with Survey Data |
| surveyoutliers | Helps Manage Outliers in Sample Surveys |
| surveyplanning | Survey Planning Tools |
| surveysd | Survey Standard Error Estimation for Cumulated Estimates and their Differences in Complex Panel Designs |
| survHE | Survival Analysis in Health Economic Evaluation |
| SurvHiDim | High Dimensional Survival Data Analysis |
| survIDINRI | IDI and NRI for Comparing Competing Risk Prediction Models with Censored Survival Data |
| survidm | Inference and Prediction in an Illness-Death Model |
| SurviMChd | High Dimensional Survival Data Analysis with Markov Chain Monte Carlo |
| survival | Survival Analysis |
| survival.svb | Fit High-Dimensional Proportional Hazards Models |
| survival666 | Eliminate the Influence of Co-Expression Genes on Target Genes |
| survivalAnalysis | High-Level Interface for Survival Analysis and Associated Plots |
| survivalmodels | Models for Survival Analysis |
| survivalMPL | Penalised Maximum Likelihood for Survival Analysis Models |
| survivalMPLdc | Penalised Likelihood for Survival Analysis with Dependent Censoring |
| SurvivalPath | Construction and Visualization of Survival Path Tree using Time-Series Survival Data |
| survivalREC | Nonparametric Estimation of the Distribution of Gap Times for Recurrent Events |
| survivalROC | Time-dependent ROC curve estimation from censored survival data |
| survivalsvm | Survival Support Vector Analysis |
| survivoR | Data from all Seasons of Survivor (US) TV Series in Tidy Format |
| survJamda | Survival Prediction by Joint Analysis of Microarray Gene Expression Data |
| survJamda.data | Data for Package 'survJambda' |
| SurvLong | Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates |
| SurvMetrics | Predictive Evaluation Metrics in Survival Analysis |
| SurvMI | Multiple Imputation Method in Survival Analysis |
| survminer | Drawing Survival Curves using 'ggplot2' |
| survMisc | Miscellaneous Functions for Survival Data |
| survmixer | Design of Clinical Trials with Survival Endpoints Based on Binary Responses |
| survMS | Survival Model Simulation |
| survParamSim | Parametric Survival Simulation with Parameter Uncertainty |
| survPen | Multidimensional Penalized Splines for Survival and Net Survival Models |
| survPresmooth | Presmoothed Estimation in Survival Analysis |
| SurvRegCensCov | Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate |
| survRM2 | Comparing Restricted Mean Survival Time |
| survRM2adapt | Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times |
| survRM2perm | Permutation Test for Comparing Restricted Mean Survival Time |
| survSens | Sensitivity Analysis with Time-to-Event Outcomes |
| survsim | Simulation of Simple and Complex Survival Data |
| survSNP | Power Calculations for SNP Studies with Censored Outcomes |
| survSpearman | Nonparametric Spearman's Correlation for Survival Data |
| survtmle | Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings |
| SurvTrunc | Analysis of Doubly Truncated Data |
| susieR | Sum of Single Effects Linear Regression |
| sutteForecastR | Forecasting Data using Alpha-Sutte Indicator |
| sValues | Measures of the Sturdiness of Regression Coefficients |
| svars | Data-Driven Identification of SVAR Models |
| svd | Interfaces to Various State-of-Art SVD and Eigensolvers |
| svDialogs | 'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes |
| svDialogstcltk | 'SciViews' - Standard Dialog Boxes using Tcl/Tk |
| svenssonm | Svensson's Method |
| svglite | An 'SVG' Graphics Device |
| svgPanZoom | R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic |
| svgtools | Manipulate SVG (Template) Files of Charts |
| svGUI | SciViews - Manage GUIs in R |
| svgViewR | 3D Animated Interactive Visualizations Using SVG and WebGL |
| svHttp | 'SciViews' - HTTP Server |
| svIDE | Functions to Ease Interactions Between R and IDE or Code Editors |
| svines | Stationary Vine Copula Models |
| svKomodo | 'SciViews' - Functions to Interface with Komodo IDE |
| svMisc | 'SciViews' - Miscellaneous Functions |
| SVMMaj | Implementation of the SVM-Maj Algorithm |
| svmpath | The SVM Path Algorithm |
| SVN | Statistically Validated Networks |
| svplots | Sample Variance Plots (Sv-Plots) |
| svrep | Tools for Creating, Updating, and Analyzing Survey Replicate Weights |
| svrpath | The SVR Path Algorithm |
| svs | Tools for Semantic Vector Spaces |
| svSocket | 'SciViews' - Socket Server |
| svSweave | 'SciViews' - 'Sweave', 'Knitr' and R Markdown Companion Functions |
| svTools | Wrappers for Tools in Other Packages for IDE Friendliness |
| svUnit | 'SciViews' - Unit, Integration and System Testing |
| svWidgets | Management of GUI Widgets, Windows, and Other GUI Resources |
| svydiags | Linear Regression Model Diagnostics for Survey Data |
| SvyNom | Nomograms for Right-Censored Outcomes from Survey Designs |
| svyVGAM | Design-Based Inference in Vector Generalised Linear Models |
| svyweight | Quick and Flexible Survey Weighting |
| swa | Subsampling Winner Algorithm for Classification |
| swag | Sparse Wrapper Algorithm |
| swagger | Dynamically Generates Documentation from a 'Swagger' Compliant API |
| swamp | Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations |
| SwarmSVM | Ensemble Learning Algorithms Based on Support Vector Machines |
| swatches | Read, Inspect, and Manipulate Color Swatch Files |
| swCRTdesign | Stepped Wedge Cluster Randomized Trial (SW CRT) Design |
| swdft | Sliding Window Discrete Fourier Transform (SWDFT) |
| swdpwr | Power Calculation for Stepped Wedge Cluster Randomized Trials |
| sweater | Speedy Word Embedding Association Test and Extras Using R |
| sweep | Tidy Tools for Forecasting |
| sweidnumbr | Handling of Swedish Identity Numbers |
| swephR | High Precision Swiss Ephemeris |
| swfscAirDAS | Southwest Fisheries Science Center Aerial DAS Data Processing |
| swfscDAS | Southwest Fisheries Science Center Shipboard DAS Data Processing |
| swfscMisc | Miscellaneous Functions for Southwest Fisheries Science Center |
| swgee | Simulation Extrapolation Inverse Probability Weighted Generalized Estimating Equations |
| SWIM | Scenario Weights for Importance Measurement |
| SwimmeR | Data Import, Cleaning, and Conversions for Swimming Results |
| swimplot | Tools for Creating Swimmers Plots using 'ggplot2' |
| swirl | Learn R, in R |
| swirlify | A Toolbox for Writing 'swirl' Courses |
| SwissAir | Air Quality Data of Switzerland for One Year in 30 Min Resolution |
| swissMrP | Multilevel Regression with Post-Stratification (MrP) for Switzerland |
| swissparl | Interface to the Webservices of the Swiss Parliament |
| switchboard | An Agile Widget Engine for Real-Time, Dynamic Visualizations |
| switchcase | A Simple and Flexible Switch-Case Construct for the 'R' Language |
| switchr | Installing, Managing, and Switching Between Distinct Sets of Installed Packages |
| switchrGist | Publish Package Manifests to GitHub Gists |
| swmmr | R Interface for US EPA's SWMM |
| SWMPr | Retrieving, Organizing, and Analyzing Estuary Monitoring Data |
| SWMPrExtension | Functions for Analyzing and Plotting Estuary Monitoring Data |
| SWTools | Helper Tools for Australian Hydrologists |
| sybil | Efficient Constrained Based Modelling |
| sybilccFBA | Cost Constrained Flux Balance Analysis (ccFBA): MetabOlic Modeling with ENzyme kineTics (MOMENT) |
| sybilcycleFreeFlux | Cycle-Free Flux Balance Analysis (CycleFreeFlux) |
| sybilDynFBA | Dynamic FBA : Dynamic Flux Balance Analysis |
| sylcount | Syllable Counting and Readability Measurements |
| syllabifyr | Syllabifier for CMU Dictionary Transcriptions |
| sylly | Hyphenation and Syllable Counting for Text Analysis |
| sylly.en | Language Support for 'sylly' Package: English |
| sym.arma | Autoregressive and Moving Average Symmetric Models |
| symbolicDA | Analysis of Symbolic Data |
| SymbolicDeterminants | Symbolic Representation of Matrix Determinant |
| symDMatrix | Partitioned Symmetric Matrices |
| symengine | Interface to the 'SymEngine' Library |
| symmetry | Testing for Symmetry of Data and Model Residuals |
| symmoments | Symbolic Central and Noncentral Moments of the Multivariate Normal Distribution |
| symphony | Efficient and Precise Single-Cell Reference Atlas Mapping |
| symSEM | Symbolic Computation for Structural Equation Models |
| SymTS | Symmetric Tempered Stable Distributions |
| syn | Creates Synonyms From Target Words |
| synchronicity | Boost Mutex Functionality in R |
| synchrony | Methods for Computing Spatial, Temporal, and Spatiotemporal Statistics |
| SynchWave | Synchrosqueezed Wavelet Transform |
| SyncMove | Subsample Temporal Data to Synchronal Events and Compute the MCI |
| SyncRNG | A Synchronized Tausworthe RNG for R and Python |
| SYNCSA | Analysis of Functional and Phylogenetic Patterns in Metacommunities |
| SynDI | Synthetic Data Integration |
| synlik | Synthetic Likelihood Methods for Intractable Likelihoods |
| synoptReg | Synoptic Climate Classification and Spatial Regionalization of Environmental Data |
| synr | Explore and Process Synesthesia Consistency Test Data |
| syntaxr | An 'SPSS' Syntax Generator for Multi-Variable Manipulation |
| Synth | Synthetic Control Group Method for Comparative Case Studies |
| synthACS | Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data |
| SynthCast | Synthetic Control Method to Forecast Series |
| synthesis | Generate Synthetic Data from Statistical Models |
| synthesisr | Import, Assemble, and Deduplicate Bibliographic Datasets |
| SynthETIC | Synthetic Experience Tracking Insurance Claims |
| synthpop | Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control |
| SynthTools | Tools and Tests for Experiments with Partially Synthetic Data Sets |
| sys | Powerful and Reliable Tools for Running System Commands in R |
| SyScSelection | Systematic Scenario Selection for Stress Testing |
| sysfonts | Loading Fonts into R |
| sysid | System Identification in R |
| syslognet | Send Log Messages to Remote 'syslog' Server |
| systemfit | Estimating Systems of Simultaneous Equations |
| systemfonts | System Native Font Finding |
| SystemicR | Monitoring Systemic Risk |
| syt | Standard Young Tableaux |
| syuzhet | Extracts Sentiment and Sentiment-Derived Plot Arcs from Text |
| T2EQ | Functions for Applying the T^2-Test for Equivalence |
| T2Qv | Control Qualitative Variables |
| T4cluster | Tools for Cluster Analysis |
| T4transport | Tools for Computational Optimal Transport |
| tab | Create Summary Tables for Statistical Reports |
| Taba | Taba Robust Correlations |
| tabbycat | Tabulate and Summarise Categorical Data |
| taber | Split and Recombine Your Data |
| tabit | Simple Tabulation Made Simple |
| tablaxlsx | Write Formatted Tables in Excel Workbooks |
| table.express | Build 'data.table' Expressions with Data Manipulation Verbs |
| table.glue | Make and Apply Customized Rounding Specifications for Tables |
| table1 | Tables of Descriptive Statistics in HTML |
| Table1Heatmap | Table 1 Heatmap |
| table1xls | Exports Reproducible Summary Tables to Multi-Tab Spreadsheet Files (.xls or .xlsx) |
| tablecompare | Compare Data Frames |
| tableeasy | Tables of Clinical Study |
| tableExtra | Draws an Awesome Table |
| TableHC | Higher Criticism Test of Two Frequency Counts Tables |
| tableHTML | A Tool to Create HTML Tables |
| tableMatrix | Combines 'data.table' and 'matrix' Classes |
| TableMonster | Table Monster |
| tableone | Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights |
| tablerDash | 'Tabler' API for 'Shiny' |
| tables | Formula-Driven Table Generation |
| tableschema.r | Table Schema 'Frictionless Data' |
| tablesgg | Presentation-Quality Tables, Displayed Using 'ggplot2' |
| tablet | Tabulate Descriptive Statistics in Multiple Formats |
| TableToLongForm | Automatically Convert Hierarchical for-Human Tables to Machine-Readable LongForm Dataframes |
| tabnet | Fit 'TabNet' Models for Classification and Regression |
| tabr | Music Notation Syntax, Manipulation, Analysis and Transcription in R |
| tabshiftr | Reshape Disorganised Messy Data |
| tabula | Analysis and Visualization of Archaeological Count Data |
| tabularaster | Tidy Tools for 'Raster' Data |
| tabularmaps | Create Tile-Grid Geographical Maps |
| tabularMLC | Tabular Maximum Likelihood Classifier |
| tabulate | Pretty Console Output for Tables |
| tabulator | Efficient Tabulation with Stata-Like Output |
| tabulog | Parsing Semi-Structured Log Files into Tabular Format |
| tabuSearch | Tabu Search Algorithm for Binary Configurations |
| tabxplor | User-Friendly Tables with Color Helpers for Data Exploration |
| tacmagic | Positron Emission Tomography Time-Activity Curve Analysis |
| tactile | New and Extended Plots, Methods, and Panel Functions for 'lattice' |
| TAF | Functions to Support the ICES Transparent Assessment Framework |
| TAG | Transformed Additive Gaussian Processes |
| tagcloud | Tag Clouds |
| TailClassifier | Tail Classifier for Thick-Tailed Discrete Data |
| tailDepFun | Minimum Distance Estimation of Tail Dependence Models |
| tailloss | Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution |
| TailRank | The Tail-Rank Statistic |
| tailTransform | Symmetric Transformation of Tails for Plotting Differences |
| taipan | Tool for Annotating Images in Preparation for Analysis |
| takos | Analysis of Differential Calorimetry Scans |
| TAM | Test Analysis Modules |
| tanaka | Design Shaded Contour Lines (or Tanaka) Maps |
| TanB | The TanB Distribution |
| TANDEM | A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types |
| TangPoemR | Write Chinese Tang Poems |
| tangram | The Grammar of Tables |
| tangram.pipe | Row-by-Row Table Building |
| TapeR | Flexible Tree Taper Curves Based on Semiparametric Mixed Models |
| tapkee | Wrapper for 'tapkee' Dimension Reduction Library |
| tapnet | Trait Matching and Abundance for Predicting Bipartite Networks |
| TAQMNGR | Manage Tick-by-Tick Transaction Data |
| TAR | Bayesian Modeling of Autoregressive Threshold Time Series Models |
| tarchetypes | Archetypes for Targets |
| targeted | Targeted Inference |
| targets | Dynamic Function-Oriented 'Make'-Like Declarative Workflows |
| Tariff | Replicate Tariff Method for Verbal Autopsy |
| TAShiny | 'Text Analyzer Shiny' |
| tashu | Analysis and Prediction of Bicycle Rental Amount |
| taskscheduleR | Schedule R Scripts and Processes with the Windows Task Scheduler |
| tastypie | Easy Pie Charts |
| tatest | Two-Group Ta-Test |
| tatoo | Combine and Export Data Frames |
| tau | Text Analysis Utilities |
| TauStar | Efficient Computation and Testing of the Bergsma-Dassios Sign Covariance |
| tauturri | Get Data Out of 'Tautulli' (Formerly 'PlexPy') |
| taxa | Classes for Storing and Manipulating Taxonomic Data |
| taxadb | A High-Performance Local Taxonomic Database Interface |
| taxalight | A Lightweight and Lightning-Fast Taxonomic Naming Interface |
| TaxicabCA | Taxicab Correspondence Analysis |
| taxize | Taxonomic Information from Around the Web |
| taxizedb | Tools for Working with 'Taxonomic' Databases |
| taxlist | Handling Taxonomic Lists |
| taxonbridge | Create Custom Taxonomies Based on the NCBI Taxonomy and GBIF Backbone Taxonomy |
| taxonomizr | Functions to Work with NCBI Accessions and Taxonomy |
| Taxonstand | Taxonomic Standardization of Plant Species Names |
| taylor | Lyrics and Song Data for Taylor Swift's Discography |
| tayloRswift | Color Palettes Generated by Taylor Swift Albums |
| tbd | Estimation of Causal Effects with Outcomes Truncated by Death |
| TBEST | Tree Branches Evaluated Statistically for Tightness |
| TBFmultinomial | TBF Methodology Extension for Multinomial Outcomes |
| tbl2xts | Convert Tibbles or Data Frames to Xts Easily |
| tbm | Transformation Boosting Machines |
| tbma | Tree-Based Moving Average Forecasting Model |
| tboot | Tilted Bootstrap |
| TBRDist | Rearrangement Distances Between Unrooted Phylogenetic Trees |
| tbrf | Time-Based Rolling Functions |
| TCA | Tensor Composition Analysis |
| tcftt | Two-Sample Tests for Skewed Data |
| TCGAretriever | Retrieve Genomic and Clinical Data from TCGA |
| tcgaViz | Visualization Tool for the Cancer Genome Atlas Program (TCGA) |
| TcGSA | Time-Course Gene Set Analysis |
| tci | Target Controlled Infusion (TCI) |
| TCIApathfinder | Client for the Cancer Imaging Archive REST API |
| tcl | Testing in Conditional Likelihood Context |
| tcltk2 | Tcl/Tk Additions |
| tclust | Robust Trimmed Clustering |
| Tcomp | Data from the 2010 Tourism Forecasting Competition |
| tcpl | ToxCast Data Analysis Pipeline |
| tcplfit2 | Concentration-Response Modeling of HTS or Transcriptomics Data |
| tcsinvest | R API for Tinkoff Investments |
| td | Access to the 'twelvedata' Financial Data API |
| TDA | Statistical Tools for Topological Data Analysis |
| TDAkit | Toolkit for Topological Data Analysis |
| TDAstats | Pipeline for Topological Data Analysis |
| tdaunif | Uniform Manifold Samplers for Topological Data Analysis |
| TDbook | Companion Package for the Book "Data Integration, Manipulation and Visualization of Phylogenetic Trees" by Guangchuang Yu (2022, ISBN:9781032233574) |
| tdcmStan | Automating the Creation of Stan Code for TDCMs |
| TDCor | Gene Network Inference from Time-Series Transcriptomic Data |
| tdigest | Wicked Fast, Accurate Quantiles Using t-Digests |
| TDPanalysis | Granier's Sap Flow Sensors (TDP) Analysis |
| tdr | Target Diagram |
| tdROC | Nonparametric Estimation of Time-Dependent ROC Curve from Right Censored Survival Data |
| tdsc | Time Domain Signal Coding |
| tdthap | TDT Tests for Extended Haplotypes |
| TE | Insertion/Deletion Dynamics for Transposable Elements |
| tea | Threshold Estimation Approaches |
| TeachHist | A Collection of Amended Histograms Designed for Teaching Statistics |
| teachingApps | Apps for Teaching Statistics, R Programming, and Shiny App Development |
| TeachingDemos | Demonstrations for Teaching and Learning |
| TeachingSampling | Selection of Samples and Parameter Estimation in Finite Population |
| TeachNet | Fits Neural Networks to Learn About Backpropagation |
| tealeaves | Solve for Leaf Temperature Using Energy Balance |
| TEAM | Multiple Hypothesis Testing on an Aggregation Tree Method |
| teamcolors | Color Palettes for Pro Sports Teams |
| teamr | Send Formatted Messages, Images and Objects to Microsoft 'Teams' |
| teda | An Implementation of the Typicality and Eccentricity Data Analysis Framework |
| teigen | Model-Based Clustering and Classification with the Multivariate t Distribution |
| Tejapi | API Wrapper for Taiwan Economic Journal Data Service |
| telefit | Estimation and Prediction for Remote Effects Spatial Process Models |
| telegram | R Wrapper Around the Telegram Bot API |
| telegram.bot | Develop a 'Telegram Bot' with R |
| telemac | R Interface to the TELEMAC Model Suite |
| TELP | Social Representation Theory Application: The Free Evocation of Words Technique |
| TempCont | Temporal Contributions on Trends using Mixed Models |
| tempdisagg | Methods for Temporal Disaggregation and Interpolation of Time Series |
| temperatureresponse | Temperature Response |
| templates | A System for Working with Templates |
| tempoR | Characterizing Temporal Dysregulation |
| Temporal | Parametric Time to Event Analysis |
| TemporalGSSA | Outputs Temporal Profile of Molecules Undergoing Stochastic Simulations |
| tempR | Temporal Sensory Data Analysis |
| Tendril | Compute and Display Tendril Plots |
| tenispolaR | Provides ZENIT-POLAR Substitution Cipher Method of Encryption |
| tensor | Tensor product of arrays |
| tensorA | Advanced Tensor Arithmetic with Named Indices |
| tensorBF | Bayesian Tensor Factorization |
| tensorBSS | Blind Source Separation Methods for Tensor-Valued Observations |
| TensorClustering | Model-Based Tensor Clustering |
| TensorComplete | Tensor Noise Reduction and Completion Methods |
| tensorflow | R Interface to 'TensorFlow' |
| tensorr | Sparse Tensors in R |
| tensorregress | Supervised Tensor Decomposition with Side Information |
| tensorsparse | Multiway Clustering via Tensor Block Models |
| TensorTest2D | Fitting Second-Order Tensor Data |
| tensorTS | Factor and Autoregressive Models for Tensor Time Series |
| tensr | Covariance Inference and Decompositions for Tensor Datasets |
| TEQR | Target Equivalence Range Design |
| tergm | Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models |
| tergmLite | Fast Simulation of Simple Temporal Exponential Random Graph Models |
| term | Create, Manipulate and Query Parameter Terms |
| terminaldigits | Tests of Uniformity and Independence for Terminal Digits |
| Ternary | Create Ternary and Holdridge Plots |
| ternvis | Visualisation, Verification and Calibration of Ternary Probabilistic Forecasts |
| terra | Spatial Data Analysis |
| terrainmeshr | Triangulate and Simplify 3D Terrain Meshes |
| terrainr | Landscape Visualizations in R and 'Unity' |
| TesiproV | Calculation of Reliability and Failure Probability in Civil Engineering |
| TESS | Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events |
| tessellation | Delaunay and Voronoï Tessellations |
| tesselle | Easily Install and Load 'tesselle' Packages |
| tesseract | Open Source OCR Engine |
| test2norm | Normative Standards for Cognitive Tests |
| testarguments | Test (Multiple) Arguments of a User-Defined Prediction Algorithm |
| testassay | A Hypothesis Testing Framework for Validating an Assay for Precision |
| TestCor | FWER and FDR Controlling Procedures for Multiple Correlation Tests |
| testcorr | Testing Zero Correlation |
| testdat | Data Unit Testing for R |
| TestDataImputation | Missing Item Responses Imputation for Test and Assessment Data |
| TestDesign | Optimal Test Design Approach to Fixed and Adaptive Test Construction |
| TestDimorph | Analysis Of The Interpopulation Difference In Degree of Sexual Dimorphism Using Summary Statistics |
| testDriveR | Teaching Data for Statistics and Data Science |
| testequavar | Bootstrap Tests for Equality of 2, 3, or 4 Population Variances |
| tester | Tests and checks characteristics of R objects |
| testforDEP | Dependence Tests for Two Variables |
| TestFunctions | Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms |
| TestGardener | Optimal Analysis of Test and Rating Scale Data |
| TestingSimilarity | Bootstrap Test for the Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation |
| testit | A Simple Package for Testing R Packages |
| TestScorer | GUI for Entering Test Items and Obtaining Raw and Transformed Scores |
| testthat | Unit Testing for R |
| testthis | Utils and 'RStudio' Addins to Make Testing Even More Fun |
| testtwice | Testing One Hypothesis Twice in Observational Studies |
| tetraclasse | Satisfaction Analysis using Tetraclasse Model and Llosa Matrix |
| tetragon | Automatic Sequence Prediction by Expansion of the Distance Matrix |
| TeXCheckR | Parses LaTeX Documents for Errors |
| TexExamRandomizer | Personalizes and Randomizes Exams Written in 'LaTeX' |
| texmex | Statistical Modelling of Extreme Values |
| TExPosition | Two-Table ExPosition |
| texPreview | Compile and Preview Snippets of 'LaTeX' |
| texreg | Conversion of R Regression Output to LaTeX or HTML Tables |
| text | Analyses of Text using Natural Language Processing and Machine Learning |
| text.alignment | Text Alignment with Smith-Waterman |
| text2map | R Tools for Text Matrices, Embeddings, and Networks |
| text2sdg | Detecting UN Sustainable Development Goals in Text |
| text2speech | Text to Speech |
| text2vec | Modern Text Mining Framework for R |
| textcat | N-Gram Based Text Categorization |
| textclean | Text Cleaning Tools |
| textdata | Download and Load Various Text Datasets |
| texteffect | Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects |
| texter | An Easy Text and Sentiment Analysis Library |
| textfeatures | Extracts Features from Text |
| TextForecast | Regression Analysis and Forecasting Using Textual Data from a Time-Varying Dictionary |
| textgRid | Praat TextGrid Objects in R |
| textile | Textile Images |
| textir | Inverse Regression for Text Analysis |
| textmineR | Functions for Text Mining and Topic Modeling |
| TextMiningGUI | Text Mining GUI Interface |
| textometry | Textual Data Analysis Package Used by the TXM Software |
| textplot | Text Plots |
| textrank | Summarize Text by Ranking Sentences and Finding Keywords |
| textreadr | Read Text Documents into R |
| textrecipes | Extra 'Recipes' for Text Processing |
| textreg | n-Gram Text Regression, aka Concise Comparative Summarization |
| textreuse | Detect Text Reuse and Document Similarity |
| textshape | Tools for Reshaping Text |
| textshaping | Bindings to the 'HarfBuzz' and 'Fribidi' Libraries for Text Shaping |
| textstem | Tools for Stemming and Lemmatizing Text |
| textTinyR | Text Processing for Small or Big Data Files |
| textTools | Functions for Text Cleansing and Text Analysis |
| textutils | Utilities for Handling Strings and Text |
| tfaddons | Interface to 'TensorFlow SIG Addons' |
| tfarima | Transfer Function and ARIMA Models |
| tfautograph | Autograph R for 'Tensorflow' |
| tfCox | Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model |
| tfdatasets | Interface to 'TensorFlow' Datasets |
| tfdeploy | Deploy 'TensorFlow' Models |
| tfer | Forensic Glass Transfer Probabilities |
| tfestimators | Interface to 'TensorFlow' Estimators |
| tfhub | Interface to 'TensorFlow' Hub |
| tfio | Interface to 'TensorFlow IO' |
| TFisher | Optimal Thresholding Fisher's P-Value Combination Method |
| TFMPvalue | Efficient and Accurate P-Value Computation for Position Weight Matrices |
| tfplot | Time Frame User Utilities |
| tfprobability | Interface to 'TensorFlow Probability' |
| tframe | Time Frame Coding Kernel |
| tframePlus | Time Frame Coding Kernel Extensions |
| tfruns | Training Run Tools for 'TensorFlow' |
| tfse | Tools for Script Editing |
| tgamtheme | Globe and Mail Graphics Theme for 'ggplot2' |
| tgcd | Thermoluminescence Glow Curve Deconvolution |
| tggd | The Standard Distribution Functions for the Truncated Generalised Gamma Distribution |
| tglkmeans | Efficient Implementation of K-Means++ Algorithm |
| tgp | Bayesian Treed Gaussian Process Models |
| tgram | Compute and Plot Tracheidograms |
| TGS | Rapid Reconstruction of Time-Varying Gene Regulatory Networks |
| TGST | Targeted Gold Standard Testing |
| tgstat | Amos Tanay's Group High Performance Statistical Utilities |
| tgver | Turing Geovisualization Engine R package |
| TH.data | TH's Data Archive |
| thaipdf | R Markdown to PDF in Thai Language |
| thankr | Find Out Who Maintains the Packages you Use |
| ThankYouStars | Give your Dependencies Stars on GitHub! |
| theft | Tools for Handling Extraction of Features from Time Series |
| theiaR | Download and Manage Data from Theia |
| thematic | Unified and Automatic 'Theming' of 'ggplot2', 'lattice', and 'base' R Graphics |
| themis | Extra Recipes Steps for Dealing with Unbalanced Data |
| ThermalSampleR | Calculate Sample Sizes Required for Critical Thermal Limits Experiments |
| Thermimage | Thermal Image Analysis |
| ThermIndex | Calculate Thermal Indexes |
| thermocouple | Temperature Measurement with Thermocouples, RTD and IC Sensors |
| TheSFACE | The Subtype Free Average Causal Effect |
| thestats | R Package for Exploring Turkish Higher Education Statistics |
| thewitcher | Palettes Inspired by the TV Show "The Witcher" |
| thgenetics | Genetic Rare Variants Tests |
| thief | Temporal Hierarchical Forecasting |
| thinkr | Tools for Cleaning Up Messy Files |
| this.path | Get Executing Script's Path, from 'RStudio', 'Rgui', 'Rscript' (Shells Including Windows Command-Line / / Unix Terminal), and 'source' |
| ThomasJeffersonUniv | Handy Tools for TJU/TJUH Employees |
| thor | Interface to 'LMDB' |
| thorn | 'HTMLwidgets' Displaying Some 'WebGL' Shaders |
| thredds | Crawler for Navigating THREDDS Catalogs |
| ThreeArmedTrials | Design and Analysis of Clinical Non-Inferiority or Superiority Trials with Active and Placebo Control |
| threeBrain | 3D Brain Visualization |
| ThreeGroups | ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments |
| threejs | Interactive 3D Scatter Plots, Networks and Globes |
| threesixtygiving | Download Charitable Grants from the '360Giving' Platform |
| ThreeWay | Three-Way Component Analysis |
| ThreeWiseMonkeys | The Japanese Pictorial Maxim "See No Evil, Hear No Evil, Speak No Evil" |
| threewords | Represent Precise Coordinates in Three Words |
| threg | Threshold Regression |
| thregI | Threshold Regression for Interval-Censored Data with a Cure Rate Option |
| Thresher | Threshing and Reaping for Principal Components |
| ThresholdROC | Optimum Threshold Estimation |
| ThresholdROCsurvival | Threshold and AUC Estimation with Right-Censored Data at a Fixed Time t |
| threshr | Threshold Selection and Uncertainty for Extreme Value Analysis |
| thriftr | Apache Thrift Client Server |
| thurstonianIRT | Thurstonian IRT Models |
| tibble | Simple Data Frames |
| tibbletime | Time Aware Tibbles |
| tictactoe | Tic-Tac-Toe Game |
| tictoc | Functions for Timing R Scripts, as Well as Implementations of Stack and List Structures |
| TideCurves | Analysis and Prediction of Tides |
| TideHarmonics | Harmonic Analysis of Tides |
| Tides | Quasi-Periodic Time Series Characteristics |
| TideTables | Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides |
| tidybayes | Tidy Data and 'Geoms' for Bayesian Models |
| tidyBdE | Download Data from Bank of Spain |
| tidybins | Make Tidy Bins |
| tidyboot | Tidyverse-Compatible Bootstrapping |
| tidycat | Expand Tidy Output for Categorical Parameter Estimates |
| tidycensus | Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames |
| tidycharts | Generate Tidy Charts Inspired by 'IBCS' |
| tidycmprsk | Competing Risks Estimation |
| tidycode | Analyze Lines of R Code the Tidy Way |
| tidycomm | Data Modification and Analysis for Communication Research |
| TidyConsultant | Tidy Consultant Universe |
| tidyCpp | Tidy C++ Header-Only Definitions for Parts of the C API of R |
| tidycwl | Tidy Common Workflow Language Tools and Workflows |
| tidydatatutor | Send Your R Code to 'Tidy Data Tutor' |
| TidyDensity | Functions for Tidy Analysis and Generation of Random Data |
| tidydice | Simulates Dice Rolls and Coin Flips |
| tidydr | Unify Dimensionality Reduction Results |
| tidyEmoji | Discovers Emoji from Text |
| tidyestimate | A Tidy Implementation of 'ESTIMATE' |
| tidyfast | Fast Tidying of Data |
| tidyfst | Tidy Verbs for Fast Data Manipulation |
| tidyft | Tidy Verbs for Fast Data Operations by Reference |
| tidygapminder | Easily Tidy Gapminder Datasets |
| tidygate | Add Gate Information to Your Tibble |
| tidygenomics | Tidy Verbs for Dealing with Genomic Data Frames |
| tidygeocoder | Geocoding Made Easy |
| tidygeoRSS | Tidy GeoRSS |
| tidygraph | A Tidy API for Graph Manipulation |
| tidyHeatmap | A Tidy Implementation of Heatmap |
| tidyhydat | Extract and Tidy Canadian 'Hydrometric' Data |
| tidyjson | Tidy Complex 'JSON' |
| tidylab | Shared Infrastructure of 'Tidylab' Package Collection |
| tidylda | Latent Dirichlet Allocation Using 'tidyverse' Conventions |
| tidylo | Weighted Tidy Log Odds Ratio |
| tidylog | Logging for 'dplyr' and 'tidyr' Functions |
| tidyLPA | Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software |
| tidymodels | Easily Install and Load the 'Tidymodels' Packages |
| TidyMultiqc | Converts 'MultiQC' Reports into Tidy Data Frames |
| tidymv | Tidy Model Visualisation for Generalised Additive Models |
| tidync | A Tidy Approach to 'NetCDF' Data Exploration and Extraction |
| tidyndr | Analysis of the Nigeria National Data Repository (NDR) |
| tidypaleo | Tidy Tools for Paleoenvironmental Archives |
| tidypmc | Parse Full Text XML Documents from PubMed Central |
| tidyposterior | Bayesian Analysis to Compare Models using Resampling Statistics |
| tidypredict | Run Predictions Inside the Database |
| tidyquant | Tidy Quantitative Financial Analysis |
| tidyquery | Query 'R' Data Frames with 'SQL' |
| tidyqwi | A Convenient API for Accessing United States Census Bureau's Quarterly Workforce Indicator |
| tidyr | Tidy Messy Data |
| tidyREDCap | Helper Functions for Working with REDCap Data |
| tidyRSS | Tidy RSS for R |
| tidyrules | Obtain Rules from Rule Based Models as Tidy Dataframe |
| tidyselect | Select from a Set of Strings |
| tidySEM | Tidy Structural Equation Modeling |
| tidyseurat | Brings Seurat to the Tidyverse |
| tidysmd | Tidy Standardized Mean Differences |
| tidysq | Tidy Processing and Analysis of Biological Sequences |
| tidystats | Save Output of Statistical Tests |
| tidystopwords | Customisable Stop-Words in 110 Languages |
| tidystringdist | String Distance Calculation with Tidy Data Principles |
| tidysynth | A Tidy Implementation of the Synthetic Control Method |
| tidytable | Tidy Interface to 'data.table' |
| tidyterra | 'tidyverse' Methods and 'ggplot2' Utils for 'terra' Objects |
| tidytext | Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools |
| tidytidbits | A Collection of Tools and Helpers Extending the Tidyverse |
| tidytransit | Read, Validate, Analyze, and Map GTFS Feeds |
| tidytreatment | Tidy Methods for Bayesian Treatment Effect Models |
| tidytree | A Tidy Tool for Phylogenetic Tree Data Manipulation |
| tidytuesdayR | Access the Weekly 'TidyTuesday' Project Dataset |
| tidyUSDA | A Minimal Tool Set for Gathering USDA Quick Stat Data for Analysis and Visualization |
| tidyverse | Easily Install and Load the 'Tidyverse' |
| tidyvpc | VPC Percentiles and Prediction Intervals |
| tidywikidatar | Explore 'Wikidata' Through Tidy Data Frames |
| tidyxl | Read Untidy Excel Files |
| tiff | Read and Write TIFF Images |
| tigerhitteR | Pre-Process of Time Series Data Set in R |
| TIGERr | Technical Variation Elimination with Ensemble Learning Architecture |
| tigerstats | R Functions for Elementary Statistics |
| tigger | Infers Novel Immunoglobulin Alleles from Sequencing Data |
| tightClust | Tight Clustering |
| tigreBrowserWriter | 'tigreBrowser' Database Writer |
| tigris | Load Census TIGER/Line Shapefiles |
| tikzDevice | R Graphics Output in LaTeX Format |
| tiledb | Universal Storage Engine for Sparse and Dense Multidimensional Arrays |
| tilegramsR | R Spatial Data for Tilegrams |
| TileManager | Tile Manager |
| tilemaps | Generate Tile Maps |
| tiler | Create Geographic and Non-Geographic Map Tiles |
| tilting | Variable Selection via Tilted Correlation Screening Algorithm |
| timbeR | Calculate Wood Volumes from Taper Functions |
| timbr | Forest Data Frames |
| time.slots | Display Data in a Weekly Calendar View |
| timechange | Efficient Changing of Date-Times |
| timeDate | Rmetrics - Chronological and Calendar Objects |
| timedelay | Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars |
| timedeppar | Infer Constant and Stochastic, Time-Dependent Model Parameters |
| timelineR | Visualization for Time Series Data |
| timelineS | Timeline and Time Duration-Related Tools |
| timeordered | Time-Ordered and Time-Aggregated Network Analyses |
| timeperiodsR | Simple Definition Of Time Intervals |
| timeR | Time Your Codes |
| timereg | Flexible Regression Models for Survival Data |
| timeROC | Time-Dependent ROC Curve and AUC for Censored Survival Data |
| timeSeq | Detecting Differentially Expressed Genes in Time Course RNA-Seq Data |
| timeSeries | Financial Time Series Objects (Rmetrics) |
| TimeSeries.OBeu | Time Series Analysis 'OpenBudgets.eu' |
| timeseriesdb | A Time Series Database for Official Statistics with R and PostgreSQL |
| timetk | A Tool Kit for Working with Time Series in R |
| timetools | Seasonal/Sequential (Instants/Durations, Even or not) Time Series |
| TimeVarConcurrentModel | Concurrent Multivariate Models with Time-Varying Coefficients |
| timevis | Create Interactive Timeline Visualizations in R |
| TimeVTree | Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach |
| TIMP | Fitting Separable Nonlinear Models in Spectroscopy and Microscopy |
| timsac | Time Series Analysis and Control Package |
| timsr | Easily Access timsTOF Data |
| Tinflex | A Universal Non-Uniform Random Number Generator |
| tinsel | Transform Functions using Decorators |
| tint | 'tint' is not 'Tufte' |
| tinter | Generate a Monochromatic Palette |
| tinyarray | Expression Data Analysis and Visualization |
| tinylabels | Lightweight Variable Labels |
| tinyProject | A Lightweight Template for Data Analysis Projects |
| tinyscholar | Get and Show Personal 'Google Scholar' Profile |
| tinyspotifyr | Tinyverse R Wrapper for the 'Spotify' Web API |
| tinytest | Lightweight and Feature Complete Unit Testing Framework |
| tinytex | Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents |
| tipa | Tau-Independent Phase Analysis for Circadian Time-Course Data |
| TipDatingBeast | Using Tip Dates with Phylogenetic Trees in BEAST |
| tipitaka | Data and Tools for Analyzing the Pali Canon |
| tipmap | Tipping Point Analysis for Bayesian Dynamic Borrowing |
| TippingPoint | Enhanced Tipping Point Displays the Results of Sensitivity Analysis for Missing Data |
| tippy | Add Tooltips to 'R markdown' Documents or 'Shiny' Apps |
| tipr | Tipping Point Analyses |
| TiPS | Trajectories and Phylogenies Simulator |
| tipsae | Tools for Handling Indices and Proportions in Small Area Estimation |
| tis | Time Indexes and Time Indexed Series |
| TITAN2 | Threshold Indicator Taxa Analysis |
| titanic | Titanic Passenger Survival Data Set |
| titeIR | Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities |
| titrationCurves | Acid/Base, Complexation, Redox, and Precipitation Titration Curves |
| TKCat | Tailored Knowledge Catalog |
| tkImgR | Simple Image Viewer for R Using the 'tcltk' Package |
| tkrplot | TK Rplot |
| tkRplotR | Display Resizable Plots |
| tLagPropOdds | Proportional Odds Model with Censored, Time-Lagged Categorical Outcome |
| tlars | The T-LARS Algorithm: Early-Terminated Forward Variable Selection |
| Tlasso | Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models |
| tldr | T Loux Doing R: Functions to Simplify Data Analysis and Reporting |
| tlm | Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables |
| TLMoments | Calculate TL-Moments and Convert Them to Distribution Parameters |
| tlrmvnmvt | Low-Rank Methods for MVN and MVT Probabilities |
| tls | Tools of Total Least Squares in Error-in-Variables Models |
| tm | Text Mining Package |
| tm.plugin.alceste | Import texts from files in the Alceste format using the tm text mining framework |
| tm.plugin.dc | Text Mining Distributed Corpus Plug-in |
| tm.plugin.europresse | Import Articles from 'Europresse' Using the 'tm' Text Mining Framework |
| tm.plugin.factiva | Import Articles from 'Factiva' Using the 'tm' Text Mining Framework |
| tm.plugin.koRpus | Full Corpus Support for the 'koRpus' Package |
| tm.plugin.lexisnexis | Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework |
| tm.plugin.mail | Text Mining E-Mail Plug-in |
| tm1r | The Integration Between 'IBM COGNOS TM1' and R |
| tmap | Thematic Maps |
| tmaptools | Thematic Map Tools |
| TMB | Template Model Builder: A General Random Effect Tool Inspired by 'ADMB' |
| tmbstan | MCMC Sampling from 'TMB' Model Object using 'Stan' |
| TmCalculator | Melting Temperature of Nucleic Acid Sequences |
| tmcn | A Text Mining Toolkit for Chinese |
| TMDb | Access to TMDb API |
| Tmisc | Turner Miscellaneous |
| tmle | Targeted Maximum Likelihood Estimation |
| tmod | Feature Set Enrichment Analysis for Metabolomics and Transcriptomics |
| tmplate | Code Generation Based on Templates |
| tmpm | Trauma Mortality Prediction Model |
| tmsens | Sensitivity Analysis Using the Trimmed Means Estimator |
| tmt | Estimation of the Rasch Model for Multistage Tests |
| TMTI | 'Too Many, Too Improbable' (TMTI) Test Procedures |
| tmvmixnorm | Sampling from Truncated Multivariate Normal and t Distributions |
| tmvnsim | Truncated Multivariate Normal Simulation |
| tmvtnorm | Truncated Multivariate Normal and Student t Distribution |
| tmvtnsim | Truncated Multivariate Normal and t Distribution Simulation |
| TNC | Temporal Network Centrality (TNC) Measures |
| tnet | Weighted, Two-Mode, and Longitudinal Networks Analysis |
| toastui | Interactive Tables, Calendars and Charts for the Web |
| TOC | Total Operating Characteristic Curve and ROC Curve |
| todor | Find All TODO Comments and More |
| togglr | 'Toggl.com' Api for 'Rstudio' |
| TOHM | Testing One Hypothesis Multiple Times |
| tokenbrowser | Create Full Text Browsers from Annotated Token Lists |
| tokenizers | Fast, Consistent Tokenization of Natural Language Text |
| tokenizers.bpe | Byte Pair Encoding Text Tokenization |
| tolerance | Statistical Tolerance Intervals and Regions |
| tomba | Official R Library for Tomba Email Finder |
| tongfen | Make Data Based on Different Geographies Comparable |
| toolbox | List, String, and Meta Programming Utility Functions |
| toolmaRk | Tests for Same-Source of Toolmarks |
| tools4uplift | Tools for Uplift Modeling |
| ToolsForCoDa | Multivariate Tools for Compositional Data Analysis |
| toolStability | Tool for Stability Indices Calculation |
| TooManyCellsR | An R Wrapper for 'TooManyCells' |
| toOrdinal | Cardinal to Ordinal Number & Date Conversion |
| TopDom | An Efficient and Deterministic Method for Identifying Topological Domains in Genomes |
| topicdoc | Topic-Specific Diagnostics for LDA and CTM Topic Models |
| topicmodels | Topic Models |
| topicmodels.etm | Topic Modelling in Embedding Spaces |
| TopicScore | The Topic SCORE Algorithm to Fit Topic Models |
| TopKLists | Inference, Aggregation and Visualization for Top-K Ranked Lists |
| topmodel | Implementation of the Hydrological Model TOPMODEL in R |
| topoDistance | Calculating Topographic Paths and Distances |
| topologyGSA | Gene Set Analysis Exploiting Pathway Topology |
| topr | Create Custom Plots for Viewing Genetic Association Results |
| toprdata | Gene and Exon Data from Ensembl |
| topsis | TOPSIS method for multiple-criteria decision making (MCDM) |
| TopSisWM | Multi-Criteria Method for Decision (TOPSIS) |
| tor | Import Multiple Files From a Single Directory at Once |
| torch | Tensors and Neural Networks with 'GPU' Acceleration |
| torchdatasets | Ready to Use Extra Datasets for Torch |
| torchopt | Advanced Optimizers for Torch |
| torchvision | Models, Datasets and Transformations for Images |
| torchvisionlib | Additional Operators for Image Models |
| TORDs | Third Order Rotatable Designs (TORDs) |
| tornado | Plots for Model Sensitivity and Variable Importance |
| toRvik | Scrape Tidy Men's College Basketball Data from Barttorvik |
| tosca | Tools for Statistical Content Analysis |
| toscmask | Improved Versions of Base Functions |
| toscutil | Utility Functions |
| tosr | Create the Tree of Science from WoS and Scopus |
| TOSTER | Two One-Sided Tests (TOST) Equivalence Testing |
| totalcensus | Extract Decennial Census and American Community Survey Data |
| TotalCopheneticIndex | Quantify the Balance of Phylogenetic Trees |
| touch | Tools of Utilization and Cost in Healthcare |
| touchard | Touchard Model and Regression |
| TouRnament | Tools for Sports Competitions |
| tourr | Tour Methods for Multivariate Data Visualisation |
| ToxCrit | Calculates Safety Stopping Boundaries for a Single-Arm Trial using Bayes |
| toxEval | Exploring Biological Relevance of Environmental Chemistry Observations |
| ToxicR | Analyzing Toxicology Dose-Response Data |
| toxpiR | Create ToxPi Prioritization Models |
| TP.idm | Estimation of Transition Probabilities for the Illness-Death Model |
| tpAUC | Estimation and Inference of Two-Way pAUC, pAUC and pODC |
| TPD | Methods for Measuring Functional Diversity Based on Trait Probability Density |
| TPEA | A Novel Topology-Based Pathway Enrichment Analysis Approach |
| TPES | Tumor Purity Estimation using SNVs |
| tpfp | Counts the Number of True Positives and False Positives |
| TPLSr | Thresholded Partial Least Squares Model for Neuroimaging Data |
| Tplyr | A Grammar of Clinical Data Summary |
| TPmsm | Estimation of Transition Probabilities in Multistate Models |
| tpn | Truncated Positive Normal Model and Extensions |
| tpr | Temporal Process Regression |
| TR8 | A Tool for Downloading Functional Traits Data for Plant Species |
| TraceAssist | Nonparametric Trace Regression via Sign Series Representation |
| tracee | Easily Save Output and Trace it Back to Code |
| tracer | Slick Call Stacks |
| tracerer | Tracer from R |
| tracheideR | Standardize Tracheidograms |
| track2KBA | Identifying Important Areas from Animal Tracking Data |
| trackdem | Particle Tracking and Demography |
| trackdf | Data Frame Class for Tracking Data |
| trackdown | Collaborative Editing of Rmd (or Rnw) Documents in Google Drive |
| trackeR | Infrastructure for Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
| trackeRapp | Interface for the Analysis of Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices |
| TrackReconstruction | Reconstruct Animal Tracks from Magnetometer, Accelerometer, Depth and Optional Speed Data |
| trackter | Automated Kinematic Analysis of Image Data |
| tractor.base | Read, Manipulate and Visualise Magnetic Resonance Images |
| trade | Tools for Trade Practitioners |
| tradepolicy | Replication of 'An Advanced Guide To Trade Policy Analysis' |
| TRADER | Tree Ring Analysis of Disturbance Events in R |
| tradestatistics | Open Trade Statistics API Wrapper and Utility Program |
| Trading | CCR, Entropy-Based Correlation Estimates & Dynamic Beta |
| TrafficBDE | Traffic Predictions Using Neural Networks |
| trafo | Estimation, Comparison and Selection of Transformations |
| traineR | Predictive Models Homologator |
| trainR | An Interface to the National Rail Enquiries Systems |
| traipse | Shared Tools for Tracking Data |
| traitdataform | Formatting and Harmonizing Ecological Trait-Data |
| traits | Species Trait Data from Around the Web |
| TraitStats | Statistical Data Analysis for Randomized Block Design Experiments |
| traj | Trajectory Analysis |
| TrajDataMining | Trajectories Data Mining |
| trajectories | Classes and Methods for Trajectory Data |
| trajeR | Group Based Modeling Trajectory |
| trajr | Animal Trajectory Analysis |
| tram | Transformation Models |
| TraMineR | Trajectory Miner: a Toolbox for Exploring and Rendering Sequences |
| TraMineRextras | TraMineR Extension |
| tramME | Transformation Models with Mixed Effects |
| tramnet | Penalized Transformation Models |
| trampoline | Make Functions that Can Recurse Infinitely |
| TRAMPR | 'TRFLP' Analysis and Matching Package for R |
| tramvs | Optimal Subset Selection for Transformation Models |
| transcribeR | Automated Transcription of Audio Files Through the HP IDOL API |
| transforEmotion | Sentiment Analysis for Text and Qualitative Data |
| transformmos | Transform MOS Values to be Robust for using Rank Based Statistics |
| transformr | Polygon and Path Transformations |
| transfR | Transfer of Hydrograph from Gauged to Ungauged Catchments |
| translation.ko | R Manuals Literally Translated in Korean |
| transmdl | Semiparametric Transformation Models |
| transmem | Treatment of Membrane-Transport Data |
| TransModel | Fit Linear Transformation Models for Right Censored Data |
| TransP | Implementation of Transportation Problem Algorithms |
| TransPhylo | Inference of Transmission Tree from a Dated Phylogeny |
| transplantr | Audit and Research Functions for Transplantation |
| transport | Computation of Optimal Transport Plans and Wasserstein Distances |
| tranSurv | Transformation Model Based Estimation of Survival and Regression Under Dependent Truncation and Independent Censoring |
| transx | Transform Univariate Time Series |
| trapezoid | The Trapezoidal Distribution |
| Tratamentos.ad | Pacote Para Analise De Experimentos Com Testemunhas Adicionais |
| trawl | Estimation and Simulation of Trawl Processes |
| TRD | Transmission Ratio Distortion |
| treasuryTR | Generate Treasury Total Returns from Yield Data |
| TreatmentSelection | Evaluate Treatment Selection Biomarkers |
| tree | Classification and Regression Trees |
| tree.interpreter | Random Forest Prediction Decomposition and Feature Importance Measure |
| treebalance | Computation of Tree (Im)Balance Indices |
| treebase | Discovery, Access and Manipulation of 'TreeBASE' Phylogenies |
| TreeBUGS | Hierarchical Multinomial Processing Tree Modeling |
| treeclim | Numerical Calibration of Proxy-Climate Relationships |
| treeClust | Cluster Distances Through Trees |
| treecm | Centre of Mass Assessment and Consolidation of Trees |
| treeDA | Tree-Based Discriminant Analysis |
| treedata.table | Manipulation of Matched Phylogenies and Data using 'data.table' |
| treedater | Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation |
| TreeDep | Air Pollution Removal by Dry Deposition on Trees |
| TreeDiagram | Tree Diagram |
| TreeDimensionTest | Trajectory Presence and Heterogeneity in Multivariate Data |
| TreeDist | Calculate and Map Distances Between Phylogenetic Trees |
| treeducken | Nested Phylogenetic Tree Simulator |
| treefit | The First Software for Quantitative Trajectory Inference |
| treeheatr | Heatmap-Integrated Decision Tree Visualizations |
| treemap | Treemap Visualization |
| treemapify | Draw Treemaps in 'ggplot2' |
| treenomial | Comparison of Trees using a Tree Defining Polynomial |
| treePlotArea | Correction Factors for Tree Plot Areas Intersected by Stand Boundaries |
| treeplyr | 'dplyr' Functionality for Matched Tree and Data Objects |
| TreeSearch | Phylogenetic Analysis with Discrete Character Data |
| TreeSim | Simulating Phylogenetic Trees |
| TreeSimGM | Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model |
| treespace | Statistical Exploration of Landscapes of Phylogenetic Trees |
| treestartr | Generate Starting Trees for Combined Molecular, Morphological and Stratigraphic Data |
| treestructure | Detect Population Structure Within Phylogenetic Trees |
| TreeTools | Create, Modify and Analyse Phylogenetic Trees |
| treetop | A Shiny-Based Application for Extracting Forest Information from LiDAR Data |
| trekcolors | Star Trek Color Palettes |
| trekfont | Star Trek Fonts Collection |
| trelliscopejs | Create Interactive Trelliscope Displays |
| trelloR | Access the Trello API |
| tremendousr | Easily Send Rewards and Incentives with 'Tremendous' from R |
| TrenchR | Tools for Microclimate and Biophysical Ecology |
| trend | Non-Parametric Trend Tests and Change-Point Detection |
| trendchange | Innovative Trend Analysis and Time-Series Change Point Analysis |
| trendeval | Evaluate Trending Models |
| trending | Model Temporal Trends |
| TrendInTrend | Odds Ratio Estimation and Power Calculation for the Trend in Trend Model |
| trendsegmentR | Linear Trend Segmentation |
| TrendSLR | Estimating Trend, Velocity and Acceleration from Sea Level Records |
| TrendTM | Trend of High-Dimensional Time Series Matrix Estimation |
| Trendtwosub | Two Sample Order Free Trend Nonparametric Inference |
| trendyy | A Tidy Wrapper Around 'gtrendsR' |
| TRES | Tensor Regression with Envelope Structure |
| TREXr | Tree Sap Flow Extractor |
| TriadSim | Simulating Triad Genomewide Genotypes |
| trialr | Clinical Trial Designs in 'rstan' |
| TrialSize | R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research |
| triangle | Provides the Standard Distribution Functions for the Triangle Distribution |
| triangulation | Determine Position of Observer |
| triangulr | High-Performance Triangular Distribution Functions |
| tribe | Play with the Tribe of Attributes |
| tricolore | A Flexible Color Scale for Ternary Compositions |
| TriDimRegression | Bayesian Statistics for 2D/3D Transformations |
| triebeard | 'Radix' Trees in 'Rcpp' |
| trigpoints | Data Set of Trig Points in Great Britain in British National Grid Coordinates |
| TriMatch | Propensity Score Matching of Non-Binary Treatments |
| trimcluster | Cluster Analysis with Trimming |
| trimetStops | Information on all of the TriMet Stops in the Portland Metro Area |
| trimmer | Trim an Object |
| trimr | An Implementation of Common Response Time Trimming Methods |
| trinROC | Statistical Tests for Assessing Trinormal ROC Data |
| TrioSGL | Trio Model with a Combination of Lasso and Group Lasso Regularization |
| trip | Tools for the Analysis of Animal Track Data |
| tripack | Triangulation of Irregularly Spaced Data |
| tripEstimation | Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes |
| TripleR | Social Relation Model (SRM) Analyses for Single or Multiple Groups |
| triplot | Explaining Correlated Features in Machine Learning Models |
| tripsAndDipR | Identification of 2n and 3n Samples from Amplicon Sequencing Data |
| triversity | Diversity Measures on Tripartite Graphs |
| TRMF | Temporally Regularized Matrix Factorization |
| tRnslate | Translate R Code in Source Files |
| troopdata | Tools for Analyzing Cross-National Military Deployment and Basing Data |
| tropAlgebra | Tropical Algebraic Functions |
| TropFishR | Tropical Fisheries Analysis |
| tRophicPosition | Bayesian Trophic Position Calculation with Stable Isotopes |
| trotter | Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector |
| trouBBlme4SolveR | Troubles Solver for 'lme4' |
| TrtCombo.FactorialExp.SR | Generation of Treatment Combination (in Standard Order) in 2^n Factorial Experiment |
| trtf | Transformation Trees and Forests |
| truelies | Bayesian Methods to Estimate the Proportion of Liars in Coin Flip Experiments |
| TrueSkillThroughTime | Skill Estimation Based on a Single Bayesian Network |
| truh | Two-Sample Nonparametric Testing Under Heterogeneity |
| TruncatedNormal | Truncated Multivariate Normal and Student Distributions |
| truncdist | Truncated Random Variables |
| TruncExpFam | Truncated Exponential Family |
| truncnorm | Truncated Normal Distribution |
| truncreg | Truncated Gaussian Regression Models |
| truncSP | Semi-parametric estimators of truncated regression models |
| trust | Trust Region Optimization |
| trustedtimestamping | Create Trusted Timestamps of Datasets and Files |
| trustOptim | Trust Region Optimization for Nonlinear Functions with Sparse Hessians |
| TrustVDJ | Tools for Immune Repertoire Analysis |
| truthiness | Illusory Truth Longitudinal Study |
| tryCatchLog | Advanced 'tryCatch()' and 'try()' Functions |
| ts.extend | Stationary Gaussian ARMA Processes and Other Time-Series Utilities |
| ts2net | From Time Series to Networks |
| TSA | Time Series Analysis |
| tsallisqexp | Tsallis q-Exp Distribution |
| TSANN | Time Series Artificial Neural Network |
| tsapp | Time Series, Analysis and Application |
| tsbox | Class-Agnostic Time Series |
| tsBSS | Blind Source Separation and Supervised Dimension Reduction for Time Series |
| TSclust | Time Series Clustering Utilities |
| tscopula | Time Series Copula Models |
| tscount | Analysis of Count Time Series |
| TSCS | Time Series Cointegrated System |
| TSdata | 'TSdbi' Illustration |
| tsdb | Terribly-Simple Data Base for Time Series |
| TSdbi | Time Series Database Interface |
| tsdecomp | Decomposition of Time Series Data |
| tsdf | Two-/Three-Stage Designs for Phase 1&2 Clinical Trials |
| TSDFGS | Training Set Determination for Genomic Selection |
| tsdisagg2 | Time Series Disaggregation |
| TSdisaggregation | High-Dimensional Temporal Disaggregation |
| TSdist | Distance Measures for Time Series Data |
| TSDT | Treatment-Specific Subgroup Detection Tool |
| tsDyn | Nonlinear Time Series Models with Regime Switching |
| TSE | Total Survey Error |
| TSEind | Total Survey Error (Independent Samples) |
| tsensembler | Dynamic Ensembles for Time Series Forecasting |
| tsentiment | Fetching Tweet Data for Sentiment Analysis |
| TSEntropies | Time Series Entropies |
| tseries | Time Series Analysis and Computational Finance |
| tseriesChaos | Analysis of Nonlinear Time Series |
| tseriesEntropy | Entropy Based Analysis and Tests for Time Series |
| TSeriesMMA | Multiscale Multifractal Analysis of Time Series Data |
| TSEtools | Manage Data from Stock Exchange Markets |
| TSEwgt | Total Survey Error Under Multiple, Different Weighting Schemes |
| TSF | Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break |
| tsfeatures | Time Series Feature Extraction |
| tsfgrnn | Time Series Forecasting Using GRNN |
| tsfknn | Time Series Forecasting Using Nearest Neighbors |
| tsfngm | Time Series Forecasting using Nonlinear Growth Models |
| TSGS | Trait Specific Gene Selection using SVM and GA |
| TSGSIS | Two Stage-Grouped Sure Independence Screening |
| tsgui | A Gui for Simulating Time Series |
| TSHRC | Two Stage Hazard Rate Comparison |
| tsibble | Tidy Temporal Data Frames and Tools |
| tsibbledata | Diverse Datasets for 'tsibble' |
| tsibbletalk | Interactive Graphics for Tsibble Objects |
| tsintermittent | Intermittent Time Series Forecasting |
| tsiR | An Implementation of the TSIR Model |
| TSLSTM | Long Short Term Memory (LSTM) Model for Time Series Forecasting |
| TSmisc | 'TSdbi' Extensions to Wrap Miscellaneous Data Sources |
| TSMN | Truncated Scale Mixtures of Normal Distributions |
| tsModel | Time Series Modeling for Air Pollution and Health |
| tsmp | Time Series with Matrix Profile |
| TSMSN | Truncated Scale Mixtures of Skew-Normal Distributions |
| TSMySQL | 'TSdbi' Extensions for 'MySQL' |
| tsna | Tools for Temporal Social Network Analysis |
| tsne | T-Distributed Stochastic Neighbor Embedding for R (t-SNE) |
| TSodbc | 'TSdbi' Extensions for ODBC |
| tsoutliers | Detection of Outliers in Time Series |
| TSP | Traveling Salesperson Problem (TSP) |
| tsPI | Improved Prediction Intervals for ARIMA Processes and Structural Time Series |
| tspmeta | Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem |
| TSPostgreSQL | 'TSdbi' Extensions for 'PostgreSQL' |
| TSPred | Functions for Benchmarking Time Series Prediction |
| tsqn | Applications of the Qn Estimator to Time Series (Univariate and Multivariate) |
| TSrepr | Time Series Representations |
| tsriadditive | Two Stage Residual Inclusion Additive Hazards Estimator |
| tsrobprep | Robust Preprocessing of Time Series Data |
| TSS.RESTREND | Time Series Segmentation of Residual Trends |
| TSsdmx | 'TSdbi' Extension to Connect with 'SDMX' |
| tsSelect | Execution of Time Series Models |
| tssim | Simulation of Daily and Monthly Time Series |
| TSsmoothing | Trend Estimation of Univariate and Bivariate Time Series with Controlled Smoothness |
| TSsql | Generic SQL Helper Functions for 'TSdbi' SQL Plugins |
| TSSQLite | 'TSdbi' Extensions for 'SQLite' |
| TSSS | Time Series Analysis with State Space Model |
| TSstudio | Functions for Time Series Analysis and Forecasting |
| tstools | A Time Series Toolbox for Official Statistics |
| TSTutorial | Fitting and Predict Time Series Interactive Laboratory |
| tsutils | Time Series Exploration, Modelling and Forecasting |
| TSVC | Tree-Structured Modelling of Varying Coefficients |
| tsviz | Easy and Interactive Time Series Visualization |
| tsvr | Timescale-Specific Variance Ratio for Use in Community Ecology |
| tswge | Time Series for Data Science |
| tsxtreme | Bayesian Modelling of Extremal Dependence in Time Series |
| TT | Display Tree Structured Data using Datatable Widget (DT) |
| TTAinterfaceTrendAnalysis | Temporal Trend Analysis Graphical Interface |
| ttbary | Barycenter Methods for Spatial Point Patterns |
| ttbbeer | US Beer Statistics from TTB |
| TTCA | Transcript Time Course Analysis |
| ttcg | Three-Term Conjugate Gradient for Unconstrained Optimization |
| ttdo | Extend 'tinytest' with 'diffobj' |
| tth | TeX-to-HTML/MathML Translators TtH/TtM |
| tTOlr | Likelihood Ratio Statistics for One or Two Sample T-Tests |
| TTR | Technical Trading Rules |
| TTS | Master Curve Estimates Corresponding to Time-Temperature Superposition |
| ttScreening | Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples |
| ttservice | A Service for Tidy Transcriptomics Software Suite |
| ttt | The Table Tool |
| ttTensor | Tensor-Train Decomposition |
| tttplot | Time to Target Plot |
| ttutils | Utility Functions |
| tuber | Client for the YouTube API |
| tubern | R Client for the YouTube Analytics and Reporting API |
| tuckerR.mmgg | Three-Mode Principal Components Analysis |
| TUFLOWR | Helper Functions for 'TUFLOW FV' Models |
| tufte | Tufte's Styles for R Markdown Documents |
| tufterhandout | Tufte-style html document format for rmarkdown |
| TukeyC | Conventional Tukey Test |
| tukeyGH | Tukey's g-and-h Probability Distribution |
| TukeyRegion | Tukey Region and Median |
| tukeytrend | Tukeys Trend Test via Multiple Marginal Models |
| TULIP | A Toolbox for Linear Discriminant Analysis with Penalties |
| tumgr | Tumor Growth Rate Analysis |
| tune | Tidy Tuning Tools |
| TunePareto | Multi-Objective Parameter Tuning for Classifiers |
| tuneR | Analysis of Music and Speech |
| tuneRanger | Tune Random Forest of the 'ranger' Package |
| tuple | Find every match, or orphan, duplicate, triplicate, or other replicated values |
| turboEM | A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms |
| turner | Turn vectors and lists of vectors into indexed structures |
| TurtleGraphics | Turtle Graphics |
| Tushare | Interface to 'Tushare Pro' API |
| tutorial | Convert R Markdown Files to DataCamp Light HTML Files |
| TUWmodel | Lumped/Semi-Distributed Hydrological Model for Education Purposes |
| tvem | Time-Varying Effect Models |
| tvgarch | Time Varying GARCH Modelling |
| tvgeom | The Time-Varying (Right-Truncated) Geometric Distribution |
| tvm | Time Value of Money Functions |
| tvmComp | Discounting and Compounding Calculations for Various Scenarios |
| tvmediation | Time Varying Mediation Analysis |
| TVMM | Multivariate Tests for the Vector of Means |
| tvR | Total Variation Regularization |
| tvReg | Time-Varying Coefficient for Single and Multi-Equation Regressions |
| tvthemes | TV Show Themes and Color Palettes for 'ggplot2' Graphics |
| twang | Toolkit for Weighting and Analysis of Nonequivalent Groups |
| twangContinuous | Toolkit for Weighting and Analysis of Nonequivalent Groups - Continuous Exposures |
| twangMediation | Twang Causal Mediation Modeling via Weighting |
| twangRDC | Gradient Boosting for Linkage Failure in FSRDCs |
| tweedie | Evaluation of Tweedie Exponential Family Models |
| tweenr | Interpolate Data for Smooth Animations |
| twenty48 | Play a Game of 2048 in the Console |
| twfy | Drive the API for TheyWorkForYou |
| twilio | An Interface to the Twilio API for R |
| twinning | Data Twinning |
| Twitmo | Twitter Topic Modeling and Visualization for R |
| R Based Twitter Client | |
| TwitterAutomatedTrading | Automated Trading Using Tweets |
| twitterwidget | Render a Twitter Status in R Markdown Pages |
| twl | Two-Way Latent Structure Clustering Model |
| twn | Taxa Waterbeheer Nederland voor R |
| TwoArmSurvSim | Simulate Survival Data for Randomized Clinical Trials |
| TwoPhaseInd | Estimate Gene-Treatment Interaction Exploiting Randomization |
| TwoRegression | Process Data from Wearable Research Devices Using Two-Regression Algorithms |
| twosamples | Fast Permutation Based Two Sample Tests |
| TwoSampleTest.HD | A Two-Sample Test for the Equality of Distributions for High-Dimensional Data |
| twosigma | DE Analysis for Single-Cell RNA-Sequencing Data |
| twostageTE | Two-Stage Threshold Estimation |
| TwoStepCLogit | Conditional Logistic Regression: A Two-Step Estimation Method |
| twoway | Analysis of Two-Way Tables |
| TwoWayFEWeights | Estimation of the Weights Attached to the Two-Way Fixed Effects Regressions |
| twowaytests | Two-Way Tests in Independent Groups Designs |
| twoxtwo | Work with Two-by-Two Tables |
| txshift | Efficient Estimation of the Causal Effects of Stochastic Interventions |
| txtplot | Text Based Plots |
| txtq | A Small Message Queue for Parallel Processes |
| typed | Support Types for Variables, Arguments, and Return Values |
| typehint | Auto-Check Types, Dimensions, and Values of Function Arguments |
| types | Type Annotations |
| tzdb | Time Zone Database Information |
| tzupdater | Time Zone Database Updater |
| u5mr | Under-Five Child Mortality Estimation |
| uaparserjs | Parse 'User-Agent' Strings |
| uavRmp | UAV Mission Planner |
| UBCRM | Functions to Simulate and Conduct Dose-Escalation Phase I Studies |
| ubiquity | PKPD, PBPK, and Systems Pharmacology Modeling Tools |
| UBL | An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks |
| ubms | Bayesian Models for Data from Unmarked Animals using 'Stan' |
| uCAREChemSuiteCLI | Resistome Predicter |
| uchardet | The Universal Character Encoding Detector |
| ucie | Mapping 3D Data into CIELab Color Space |
| uclust | Clustering and Classification Inference with U-Statistics |
| ucminf | General-Purpose Unconstrained Non-Linear Optimization |
| UComp | Automatic Unobserved Components Models |
| UCR.ColumnNames | Fixes Column Names for Uniform Crime Report "Offenses Known and Clearance by Arrest" Datasets |
| UCSCXenaShiny | Interactive Analysis of UCSC Xena Data |
| UCSCXenaTools | Download and Explore Datasets from UCSC Xena Data Hubs |
| UdderQuarterInfectionData | Udder Quarter Infection Data |
| udpipe | Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit |
| udunits2 | Udunits-2 Bindings for R |
| ufRisk | Risk Measure Calculation in Financial TS |
| ufs | A Collection of Utilities |
| ugatsdb | Uganda Time Series Database API |
| uGMAR | Estimate Univariate Gaussian and Student's t Mixture Autoregressive Models |
| ugomquantreg | Quantile Regression Modeling for Unit-Gompertz Responses |
| uHMM | Construct an Unsupervised Hidden Markov Model |
| ui | Uncertainty Intervals and Sensitivity Analysis for Missing Data |
| uiucthemes | 'R' 'Markdown' Themes for 'UIUC' Documents and Presentations |
| uk2us | Convert Words Between UK and US English |
| UKB.COVID19 | UK Biobank COVID-19 Data Processing and Risk Factor Association Tests |
| ukbabynames | UK Baby Names Data |
| ukbtools | Manipulate and Explore UK Biobank Data |
| UKFE | UK Flood Estimation |
| ukgasapi | API for UK Energy Market Information |
| UKgrid | The UK National Electricity Transmission System Dataset |
| uklr | Client to United Kingdom Land Registry |
| ukpolice | Download Data on UK Police and Crime |
| ulid | Generate Universally Unique Lexicographically Sortable Identifiers |
| Ultimixt | Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior |
| umap | Uniform Manifold Approximation and Projection |
| Umatrix | Visualization of Structures in High-Dimensional Data |
| umiAnalyzer | Tools for Analyzing Sequencing Data with Unique Molecular Identifiers |
| Umoments | Unbiased Central Moment Estimates |
| ump | Uniformly Most Powerful Tests |
| Umpire | Simulating Realistic Gene Expression and Clinical Data |
| UMR | Unmatched Monotone Regression |
| umx | Structural Equation Modeling and Twin Modeling in R |
| unbalhaar | Function Estimation via Unbalanced Haar Wavelets |
| UncDecomp | Uncertainty Decomposition |
| uncertainty | Uncertainty Estimation and Contribution Analysis |
| UNCLES | Unification of Clustering Results from Multiple Datasets using External Specifications |
| uncmbb | UNC Men's Basketball Match Results Since 1949-1950 Season |
| uncorbets | Uncorrelated Bets via Minimum Torsion Algorithm |
| understandBPMN | Calculator of Understandability Metrics for BPMN |
| UNF | Tools for Creating Universal Numeric Fingerprints for Data |
| unglue | Extract Matched Substrings Using a Pattern |
| ungroup | Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data |
| unheadr | Handle Data with Messy Header Rows and Broken Values |
| uni.survival.tree | A Survival Tree Based on Stabilized Score Tests for High-dimensional Covariates |
| uniah | Unimodal Additive Hazards Model |
| Unicode | Unicode Data and Utilities |
| unifDAG | Uniform Sampling of Directed Acyclic Graphs |
| unifed | The Unifed Distribution |
| UnifiedDoseFinding | Dose-Finding Methods for Non-Binary Outcomes |
| unifir | A Unifying API for Calling the 'Unity' '3D' Video Game Engine |
| uniformly | Uniform Sampling |
| UniIsoRegression | Unimodal and Isotonic L1, L2 and Linf Regression |
| unikn | Graphical Elements of the University of Konstanz's Corporate Design |
| unine | Unine Light Stemmer |
| UniprotR | Retrieving Information of Proteins from Uniprot |
| uniqtag | Abbreviate Strings to Short, Unique Identifiers |
| uniReg | Unimodal Penalized Spline Regression using B-Splines |
| unisensR | Read 'Unisens' Data |
| uniset | Dynamic Settings File |
| uniswappeR | Interact with the Uniswap Platform |
| UnitCircle | Check if Roots of a Polynomial Lie Outside the Unit Circle |
| unitedR | Assessment and Evaluation of Formations in United |
| unitizer | Interactive R Unit Tests |
| units | Measurement Units for R Vectors |
| UnitStat | Performs Unit Root Test Statistics |
| unittest | TAP-Compliant Unit Testing |
| unival | Assessing Essential Unidimensionality Using External Validity Information |
| univariateML | Maximum Likelihood Estimation for Univariate Densities |
| universals | S3 Generics for Bayesian Analyses |
| univOutl | Detection of Univariate Outliers |
| UnivRNG | Univariate Pseudo-Random Number Generation |
| unix | POSIX System Utilities |
| unjoin | Separate a Data Frame by Normalization |
| unmarked | Models for Data from Unmarked Animals |
| unnest | Unnest Hierarchical Data Structures |
| UNPaC | Non-Parametric Cluster Significance Testing with Reference to a Unimodal Null Distribution |
| unpivotr | Unpivot Complex and Irregular Data Layouts |
| unrepx | Analysis and Graphics for Unreplicated Experiments |
| unrtf | Extract Text from Rich Text Format (RTF) Documents |
| unstruwwel | Detect and Parse Historic Dates |
| unsystation | Stationarity Test Based on Unsystematic Sub-Sampling |
| untb | Ecological Drift under the UNTB |
| unusualprofile | Calculates Conditional Mahalanobis Distances |
| unvotes | United Nations General Assembly Voting Data |
| UPCM | Uncertainty in Partial Credit Models |
| updater | Utilities for Updating R |
| updog | Flexible Genotyping for Polyploids |
| UPG | Efficient Bayesian Algorithms for Binary and Categorical Data Regression Models |
| UPMASK | Unsupervised Photometric Membership Assignment in Stellar Clusters |
| upsetjs | 'HTMLWidget' Wrapper of 'UpSet.js' for Exploring Large Set Intersections |
| UpSetR | A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets |
| UpSetVP | An Alternative Visualization of VPA and HP in Canonical Analysis |
| upstartr | Utilities Powering the Globe and Mail's Data Journalism Template |
| UPSvarApprox | Approximate the Variance of the Horvitz-Thompson Total Estimator |
| uptasticsearch | Get Data Frame Representations of 'Elasticsearch' Results |
| uptimeRobot | Access the UptimeRobot Ping API |
| urbin | Unifying Estimation Results with Binary Dependent Variables |
| urca | Unit Root and Cointegration Tests for Time Series Data |
| urlchecker | Run CRAN URL Checks from Older R Versions |
| urltools | Vectorised Tools for URL Handling and Parsing |
| uroot | Unit Root Tests for Seasonal Time Series |
| ursa | Non-Interactive Spatial Tools for Raster Processing and Visualization |
| us.census.geoheader | US 2010 Census SF2 Geographic Header Summary Levels 010-050 |
| usa | Updated US State Facts and Figures |
| USA.state.boundaries | Replacement of the 'USGSstates2k' Package |
| USAboundaries | Historical and Contemporary Boundaries of the United States of America |
| UScensus2010 | US Census 2010 Suite of R Packages |
| uscoauditlog | United States Copyright Office Product Management Division SR Audit Data Dataset Cleaning Algorithms |
| usdampr | Request USDA MPR Historical Data via the 'LMR' API |
| usdarnass | USDA NASS Quick Stats API |
| usdata | Data on the States and Counties of the United States |
| usdm | Uncertainty Analysis for Species Distribution Models |
| usedist | Distance Matrix Utilities |
| useful | A Collection of Handy, Useful Functions |
| usefun | A Collection of Useful Functions by John |
| usemodels | Boilerplate Code for 'Tidymodels' Analyses |
| usethat | Automate Analytic Project Setup and Development |
| usethis | Automate Package and Project Setup |
| usfertilizer | County-Level Estimates of Fertilizer Application in USA |
| USgas | The Demand for Natural Gas in the US |
| USgrid | The Demand and Supply for Electricity in the US |
| ushr | Understanding Suppression of HIV |
| usincometaxes | Calculate Federal and State Income Taxes in the United States |
| UsingR | Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition |
| uskewFactors | Model-Based Clustering via Mixtures of Unrestricted Skew-t Sactor Analyzer Models |
| usl | Analyze System Scalability with the Universal Scalability Law |
| usmap | US Maps Including Alaska and Hawaii |
| usmapdata | Mapping Data for 'usmap' Package |
| USP | U-Statistic Permutation Tests of Independence for all Data Types |
| USpopcenters | United States Centers of Population (Centroids) |
| UStatBookABSC | A Companion Package to the Book "U-Statistics, M-Estimation and Resampling" |
| ustfd | API Client for US Treasury Fiscal Data |
| ustyc | Fetch US Treasury yield curve data |
| utc | Coordinated Universal Time Transformations |
| utf8 | Unicode Text Processing |
| utile.tables | Build Tables for Publication |
| utile.tools | Summarize Data for Publication |
| utile.visuals | Create Visuals for Publication |
| utilities | Data Utility Functions |
| utility | Construct, Evaluate and Plot Value and Utility Functions |
| UtilityFrailtyPH12 | Implementing EFF-TOX and Monotone Utility Based Phase 12 Trials |
| utilityFunctionTools | P-Spline Regression for Utility Functions and Derived Measures |
| utilsIPEA | IPEA Common Functions |
| utiml | Utilities for Multi-Label Learning |
| utr.annotation | Annotate Variants in the Untranslated Regions |
| uuid | Tools for Generating and Handling of UUIDs |
| uwedragon | Data Research, Access, Governance Network : Statistical Disclosure Control |
| UWHAM | Unbinned Weighted Histogram Analysis Method (UWHAM) |
| uwo4419 | UWO POLSCI 4419/9715 |
| uwot | The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction |
| V8 | Embedded JavaScript and WebAssembly Engine for R |
| vacuum | Tukey's Vacuum Cleaner |
| vader | Valence Aware Dictionary and sEntiment Reasoner (VADER) |
| vaersNDvax | Non-Domestic Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
| vaersvax | US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present |
| vagalumeR | Access to the 'Vagalume' API |
| vagam | Variational Approximations for Generalized Additive Models |
| VAJointSurv | Variational Approximation for Joint Survival and Marker Models |
| valaddin | Functional Input Validation |
| valection | Sampler for Verification Studies |
| VALERIE | Visualising Splicing at Single-Cell Resolution |
| valet | Provide R Client to the Bank of Canada's Valet API |
| valhallr | A Tidy Interface to the 'Valhalla' Routing Engine |
| validann | Validation Tools for Artificial Neural Networks |
| validata | Validate Data Frames |
| validate | Data Validation Infrastructure |
| validatedb | Validate Data in a Database using 'validate' |
| validateRS | One-Sided Multivariate Testing Procedures for Rating Systems |
| validatetools | Checking and Simplifying Validation Rule Sets |
| valmetrics | Metrics and Plots for Model Evaluation |
| valorate | Velocity and Accuracy of the LOg-RAnk TEst |
| valottery | Results from the Virginia Lottery Draw Games |
| valr | Genome Interval Arithmetic |
| valse | Variable Selection with Mixture of Models |
| valueEQ5D | Scoring EQ-5d Descriptive System |
| valuemap | Making Choropleth Map |
| VAM | Variance-Adjusted Mahalanobis |
| vamc | A Monte Carlo Valuation Framework for Variable Annuities |
| vampyr | Factor Analysis Controlling the Effects of Response Bias |
| VancouvR | Access the 'City of Vancouver' Open Data API |
| vandalico | Evaluation of Presence-Absence Models |
| vanddraabe | Identification and Statistical Analysis of Conserved Waters Near Proteins |
| vangogh | A Vincent Van Gogh Color Palette Generator |
| vannstats | Simplified Statistics for PA 606 |
| vanquish | Variant Quality Investigation Helper |
| vapour | Lightweight Access to the 'Geospatial Data Abstraction Library' ('GDAL') |
| VAR.etp | VAR Modelling: Estimation, Testing, and Prediction |
| varband | Variable Banding of Large Precision Matrices |
| varbin | Optimal Binning of Continuous and Categorical Variables |
| varbvs | Large-Scale Bayesian Variable Selection Using Variational Methods |
| varclust | Variables Clustering |
| VARDetect | Multiple Change Point Detection in Structural VAR Models |
| vardiag | Variogram Diagnostics |
| vardpoor | Variance Estimation for Sample Surveys by the Ultimate Cluster Method |
| VarED | Variance Estimation using Difference-Based Methods |
| VaRES | Computes Value at Risk and Expected Shortfall for over 100 Parametric Distributions |
| varEst | Variance Estimation |
| VarfromPDB | Disease-Gene-Variant Relations Mining from the Public Databases and Literature |
| varhandle | Functions for Robust Variable Handling |
| variability | Genetic Variability Analysis for Plant Breeding Research |
| variables | Variable Descriptions |
| VariableScreening | High-Dimensional Screening for Semiparametric Longitudinal Regression |
| varian | Variability Analysis in R |
| VarianceGamma | The Variance Gamma Distribution |
| VariantScan | A Machine Learning Tool for Genetic Association Studies |
| variantspark | A 'Sparklyr' Extension for 'VariantSpark' |
| varImp | RF Variable Importance for Arbitrary Measures |
| variosig | Testing Spatial Dependence Using Empirical Variogram |
| varitas | Variant Calling in Targeted Analysis Sequencing Data |
| varjmcm | Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models |
| VARMER | Variational Merging |
| VarRedOpt | A Framework for Variance Reduction |
| VarReg | Semi-Parametric Variance Regression |
| vars | VAR Modelling |
| varSel | Sequential Forward Floating Selection using Jeffries-Matusita Distance |
| VarSelLCM | Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values |
| varSelRF | Variable Selection using Random Forests |
| varsExplore | Searchable Variable Explorer with Labelled Variables |
| VARshrink | Shrinkage Estimation Methods for Vector Autoregressive Models |
| varTestnlme | Variance Components Testing for Linear and Nonlinear Mixed Effects Models |
| VARtests | Tests for Error Autocorrelation, ARCH Errors, and Cointegration in Vector Autoregressive Models |
| varycoef | Modeling Spatially Varying Coefficients |
| vasicek | Miscellaneous Functions for Vasicek Distribution |
| vasicekreg | Regression Modeling Using Vasicek Distribution |
| vaultr | Vault Client for Secrets and Sensitive Data |
| VBLPCM | Variational Bayes Latent Position Cluster Model for Networks |
| VBsparsePCA | The Variational Bayesian Method for Sparse PCA |
| VC2copula | Extend the 'copula' Package with Families and Models from 'VineCopula' |
| VCA | Variance Component Analysis |
| vccp | Vine Copula Change Point Detection in Multivariate Time Series |
| vcd | Visualizing Categorical Data |
| vcdExtra | 'vcd' Extensions and Additions |
| vcfR | Manipulate and Visualize VCF Data |
| vcmeta | Varying Coefficient Meta-Analysis |
| vcov | Variance-Covariance Matrices and Standard Errors |
| vcpen | Penalized Variance Components Analysis |
| vcr | Record 'HTTP' Calls to Disk |
| vctrs | Vector Helpers |
| vcvComp | Comparison of Variance - Covariance Patterns |
| VDAP | Peptide Array Analysis Tools |
| vdar | Discriminant Analysis Incorporating Individual Uncertainties |
| vdg | Variance Dispersion Graphs and Fraction of Design Space Plots |
| vdiffr | Visual Regression Testing and Graphical Diffing |
| VDJgermlines | Variable, Diversity and Joining Sequences from Various Species |
| vdra | Vertical Distributed Regression Analysis |
| VDSM | Visualization of Distribution of Selected Model |
| VDSPCalibration | Statistical Methods for Designing and Analyzing a Calibration Study |
| vec2dtransf | 2D Cartesian Coordinate Transformation |
| veccompare | Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output |
| vecsets | Like Set Tools in 'Base' Package but Keeps Duplicate Elements |
| VecStatGraphs2D | Vector Analysis using Graphical and Analytical Methods in 2D |
| vectorwavelet | Vector Wavelet Coherence for Multiple Time Series |
| vegalite | Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec' |
| vegan | Community Ecology Package |
| vegan3d | Static and Dynamic 3D Plots for the 'vegan' Package |
| vegawidget | 'Htmlwidget' for 'Vega' and 'Vega-Lite' |
| vegclust | Fuzzy Clustering of Vegetation Data |
| vegdata | Access Vegetation Databases and Treat Taxonomy |
| vegperiod | Determine Thermal Vegetation Periods |
| vegtable | Handling Vegetation Data Sets |
| vein | Vehicular Emissions Inventories |
| velociraptr | Fossil Analysis |
| vembedr | Embed Video in HTML |
| venn | Draw Venn Diagrams |
| VennDiagram | Generate High-Resolution Venn and Euler Plots |
| venneuler | Venn and Euler Diagrams |
| vennLasso | Variable Selection for Heterogeneous Populations |
| vennplot | Venn Diagrams in 2D and 3D |
| verbalisr | Describe Pedigree Relationships in Words |
| verhoeff | Implementation of the 'Verhoeff' Check Digit Algorithm |
| verification | Weather Forecast Verification Utilities |
| versions | Query and Install Specific Versions of Packages on CRAN |
| versionsort | Sort and Order Version Codes |
| vertexenum | Vertex Enumeration of Polytopes |
| VertexSimilarity | Creates Vertex Similarity Matrix for an Undirected Graph |
| VertexSort | Network Hierarchical Structure and Randomization |
| VeryLargeIntegers | Store and Operate with Arbitrarily Large Integers |
| vesselr | Gradient and Vesselness Tools for Arrays and NIfTI Images |
| vetiver | Version, Share, Deploy, and Monitor Models |
| vetr | Trust, but Verify |
| VetResearchLMM | Linear Mixed Models - An Introduction with Applications in Veterinary Research |
| VEwaning | Vaccine Efficacy Over Time |
| VEwaningVariant | Vaccine Efficacy Over Time - Variant Aware |
| vfcp | Computation of v Values for U and Copula C(U, v) |
| vfinputs | Visual Filter Inputs for Shiny |
| VFP | Variance Function Program |
| vfprogression | Visual Field (VF) Progression Analysis and Plotting Methods |
| VFS | Vegetated Filter Strip and Erosion Model |
| VGAM | Vector Generalized Linear and Additive Models |
| VGAMdata | Data Supporting the 'VGAM' Package |
| VGAMextra | Additions and Extensions of the 'VGAM' Package |
| vhcub | Virus-Host Codon Usage Co-Adaptation Analysis |
| VHDClassification | Discrimination/Classification in very high dimension with linear and quadratic rules |
| vhica | Vertical and Horizontal Inheritance Consistence Analysis |
| viafr | Interface to the 'VIAF' ('Virtual International Authority File') API |
| VIC5 | The Variable Infiltration Capacity (VIC) Hydrological Model |
| vICC | Varying Intraclass Correlation Coefficients |
| vici | Vaccine Induced Cellular Immunogenicity with Bivariate Modeling |
| VicmapR | Access Victorian Spatial Data Through Web File Services (WFS) |
| video | 'Shiny' Extension of 'video.js' |
| vietnamcode | Convert Vietnam Provincial Codes |
| vietnameseConverter | Convert Vietnamese Encodings |
| ViewPipeSteps | Create View Tabs of Pipe Chains |
| viewpoly | A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species |
| VIFCP | Detecting Change-Points via VIFCP Method |
| VIGoR | Variational Bayesian Inference for Genome-Wide Regression |
| villager | A Framework for Designing and Running Agent Based Models |
| VIM | Visualization and Imputation of Missing Values |
| vimp | Perform Inference on Algorithm-Agnostic Variable Importance |
| vimpclust | Variable Importance in Clustering |
| vindecodr | Provides an Interface to the Department of Transportation VIN Decoder |
| VineCopula | Statistical Inference of Vine Copulas |
| vinereg | D-Vine Quantile Regression |
| vines | Multivariate Dependence Modeling with Vines |
| violinplotter | Plotting and Comparing Means with Violin Plots |
| vioplot | Violin Plot |
| vip | Variable Importance Plots |
| vipor | Plot Categorical Data Using Quasirandom Noise and Density Estimates |
| VIRF | Computation of Volatility Impulse Response Function of Multivariate Time Series |
| viridis | Colorblind-Friendly Color Maps for R |
| viridisLite | Colorblind-Friendly Color Maps (Lite Version) |
| virtualPollen | Simulating Pollen Curves from Virtual Taxa with Different Life and Niche Traits |
| VirtualPop | Simulation of Populations by Sampling Waiting-Time Distributions |
| virtualspecies | Generation of Virtual Species Distributions |
| virtuoso | Interface to 'Virtuoso' using 'ODBC' |
| virustotal | R Client for the VirusTotal API |
| visa | Vegetation Imaging Spectroscopy Analyzer |
| visachartR | Wrapper for 'Visa Chart Components' |
| visae | Visualization of Adverse Events |
| visaOTR | Valid Improved Sparsity A-Learning for Optimal Treatment Decision |
| viscomplexr | Phase Portraits of Functions in the Complex Number Plane |
| visdat | Preliminary Visualisation of Data |
| ViSiElse | A Visual Tool for Behavior Analysis over Time |
| visit | Phase I Dose Escalation Study Design for Vaccines |
| VisitorCounts | Modeling and Forecasting Visitor Counts Using Social Media |
| visNetwork | Network Visualization using 'vis.js' Library |
| visR | Clinical Graphs and Tables Adhering to Graphical Principles |
| visreg | Visualization of Regression Models |
| visStatistics | Automated Visualization of Statistical Tests |
| vistime | Pretty Timelines in R |
| visTree | Visualization of Subgroups for Decision Trees |
| vistributions | Visualize Probability Distributions |
| visualFields | Statistical Methods for Visual Fields |
| visualize | Graph Probability Distributions with User Supplied Parameters and Statistics |
| Visualize.CRAN.Downloads | Visualize Downloads from 'CRAN' Packages |
| VisualizeSimon2Stage | Visualize Simon's Two-Stage Design |
| visualpred | Visualization 2D of Binary Classification Models |
| visvow | Visible Vowels: Visualization of Vowel Variation |
| visxhclust | A Shiny App for Visual Exploration of Hierarchical Clustering |
| vita | Variable Importance Testing Approaches |
| vitae | Curriculum Vitae for R Markdown |
| vitality | Fitting Routines for the Vitality Family of Mortality Models |
| vivid | Variable Importance and Variable Interaction Displays |
| vivo | Variable Importance via Oscillations |
| vizdraws | Visualize Draws from the Prior and Posterior Distributions |
| vkR | Access to VK API via R |
| vlad | Variable Life Adjusted Display and Other Risk-Adjusted Quality Control Charts |
| vlda | Visualization of Multidimensional Longitudinal Data |
| VLMC | Variable Length Markov Chains ('VLMC') Models |
| VLTimeCausality | Variable-Lag Time Series Causality Inference Framework |
| VMDecomp | Variational Mode Decomposition |
| VMDML | Variational Mode Decomposition Based Machine Learning Models |
| vmdTDNN | VMD Based Time Delay Neural Network Model |
| vmeasur | Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope |
| vmr | Virtual Machines for R |
| vntrs | Variable Neighborhood Trust Region Search |
| vocaldia | Create and Manipulate Vocalisation Diagrams |
| volcano3D | 3D Volcano Plots and Polar Plots for Three-Class Data |
| volesti | Volume Approximation and Sampling of Convex Polytopes |
| volleystat | Detailed Statistics on Volleyball Matches |
| voluModel | Modeling Species Distributions in Three Dimensions |
| voronoiTreemap | Voronoi Treemaps with Added Interactivity by Shiny |
| VorteksExport | Export Dataframes to 'Vorteks' Software |
| vortexRdata | Example Data for R Package 'vortexR' |
| voson.tcn | Twitter Conversation Networks and Analysis |
| VOSONDash | User Interface for Collecting and Analysing Social Networks |
| vosonSML | Collecting Social Media Data and Generating Networks for Analysis |
| Voss | Generic Voss Algorithm (Random Sequential Additions) |
| vote | Election Vote Counting |
| voteogram | United States House and Senate Voting Cartogram Generators |
| votesmart | Wrapper for the Project 'VoteSmart' API |
| votesys | Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods |
| vottrans | Voter Transition Analysis |
| vov | CSS Animations for 'shiny' Elements |
| vowels | Vowel Manipulation, Normalization, and Plotting |
| voxel | Mass-Univariate Voxelwise Analysis of Medical Imaging Data |
| VoxR | Trees Geometry and Morphology from Unstructured TLS Data |
| vpc | Create Visual Predictive Checks |
| VPdtw | Variable Penalty Dynamic Time Warping |
| vprr | Processing and Visualization of Video Plankton Recorder Data |
| vrcp | Change Point Estimation for Regression with Varying Segments and Heteroscedastic Variances |
| vrnmf | Volume-Regularized Structured Matrix Factorization |
| vroom | Read and Write Rectangular Text Data Quickly |
| vrtest | Variance Ratio Tests and Other Tests for Martingale Difference Hypothesis |
| vsd | Graphical Shim for Visual Survival Data Analysis |
| VSdecomp | Variance and Skewness Decomposition |
| vsgoftest | Goodness-of-Fit Tests Based on Kullback-Leibler Divergence |
| vsp | Vintage Sparse PCA for Semi-Parametric Factor Analysis |
| vstsr | Access to 'Azure DevOps' API via R |
| VSURF | Variable Selection Using Random Forests |
| vtable | Variable Table for Variable Documentation |
| vtreat | A Statistically Sound 'data.frame' Processor/Conditioner |
| vtree | Display Information About Nested Subsets of a Data Frame |
| VTShiny | Interactive Document for Working with Variance Analysis |
| vtype | Estimates the Variable Type in Error Afflicted Data |
| vudc | Visualization of Univariate Data for Comparison |
| vueR | 'Vuejs' Helpers and 'Htmlwidget' |
| VulnToolkit | Analysis of Tidal Datasets |
| VUROCS | Volume under the ROC Surface for Multi-Class ROC Analysis |
| vwline | Draw Variable-Width Lines |
| VWPre | Tools for Preprocessing Visual World Data |
| W2CWM2C | A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis |
| W3CMarkupValidator | R Interface to W3C Markup Validation Services |
| WA | While-Alive Loss Rate for Recurrent Event in the Presence of Death |
| wacolors | Colorblind-Friendly Palettes from Washington State |
| WACS | Multivariate Weather-State Approach Conditionally Skew-Normal Generator |
| wactor | Word Factor Vectors |
| waffle | Create Waffle Chart Visualizations in R |
| waiter | Loading Screen for 'Shiny' |
| wakefield | Generate Random Data Sets |
| wal | Read and Write 'wal' Bitmap Image Files and Other 'Quake' Assets |
| waldo | Find Differences Between R Objects |
| walker | Bayesian Generalized Linear Models with Time-Varying Coefficients |
| walkscoreAPI | Walk Score and Transit Score API |
| wallace | A Modular Platform for Reproducible Modeling of Species Niches and Distributions |
| WallomicsData | Datasets for Multi-Omics Integration in a Plant Abiotic Stress Context |
| wally | The Wally Calibration Plot for Risk Prediction Models |
| walmartAPI | Walmart Open API Wrapper |
| walrus | Robust Statistical Methods |
| WaMaSim | Simulate Rehabilitation Strategies for Water Distribution Systems |
| wand | Retrieve 'Magic' Attributes from Files and Directories |
| warabandi | Roster Generation of Turn for Weekdays:'warabandi' |
| warbleR | Streamline Bioacoustic Analysis |
| WARN | Weaning Age Reconstruction with Nitrogen Isotope Analysis |
| warp | Group Dates |
| warpMix | Mixed Effects Modeling with Warping for Functional Data Using B-Spline |
| washdata | Urban Water and Sanitation Survey Dataset |
| washeR | Time Series Outlier Detection |
| washex | Washington State Legislative Explorer |
| WASP | Wavelet System Prediction |
| waspr | Wasserstein Barycenters of Subset Posteriors |
| waterData | Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data |
| waterfall | Waterfall Charts |
| waterfalls | Create Waterfall Charts using 'ggplot2' Simply |
| waterquality | Satellite Derived Water Quality Detection Algorithms |
| Watersheds | Spatial Watershed Aggregation and Spatial Drainage Network Analysis |
| waterYearType | Sacramento and San Joaquin Valley Water Year Types |
| waveband | Computes Credible Intervals for Bayesian Wavelet Shrinkage |
| waved | Wavelet Deconvolution |
| wavefunction | Wave Function Representation of Real Distributions |
| WaveletANN | Wavelet ANN Model |
| WaveletArima | Wavelet-ARIMA Model for Time Series Forecasting |
| WaveletComp | Computational Wavelet Analysis |
| WaveletGARCH | Fit the Wavelet-GARCH Model to Volatile Time Series Data |
| WaveletRF | Wavelet-RF Hybrid Model for Time Series Forecasting |
| wavelets | Functions for Computing Wavelet Filters, Wavelet Transforms and Multiresolution Analyses |
| WaveletSVR | Wavelet-SVR Hybrid Model for Time Series Forecasting |
| wavemulcor | Wavelet Routines for Global and Local Multiple Regression and Correlation |
| waver | Calculate Fetch and Wave Energy |
| WaverR | Data Estimation using Weighted Averages of Multiple Regressions |
| waves | Vis-NIR Spectral Analysis Wrapper |
| WaveSampling | Weakly Associated Vectors (WAVE) Sampling |
| waveslim | Basic Wavelet Routines for One-, Two-, and Three-Dimensional Signal Processing |
| wavethresh | Wavelets Statistics and Transforms |
| wavScalogram | Wavelet Scalogram Tools for Time Series Analysis |
| waydown | Computation of Approximate Potentials for Weakly Non-Gradient Fields |
| waywiser | Yardstick Extensions for Measuring Spatial Structure in Model Residuals |
| wbacon | Weighted BACON Algorithms |
| wbs | Wild Binary Segmentation for Multiple Change-Point Detection |
| wbsd | Wild Bootstrap Size Diagnostics |
| wbstats | Programmatic Access to Data and Statistics from the World Bank API |
| wbsts | Multiple Change-Point Detection for Nonstationary Time Series |
| wcde | Download Data from the Wittgenstein Centre Human Capital Data Explorer |
| WCE | Weighted Cumulative Exposure Models |
| wcep | Survival Analysis for Weighted Composite Endpoints |
| WCM | Water Cloud Model (WCM) for the Simulation of Leaf Area Index (LAI) and Soil Moisture (SM) from Microwave Backscattering |
| Wcompo | Semiparametric Proportional Means Regression of Weighted Composite Endpoint |
| wCorr | Weighted Correlations |
| WDI | World Development Indicators and Other World Bank Data |
| wdm | Weighted Dependence Measures |
| wdman | 'Webdriver'/'Selenium' Binary Manager |
| wdnet | Weighted and Directed Networks |
| wdnr.gis | Pull Spatial Layers from 'WDNR ArcGIS REST API' |
| wdpar | Interface to the World Database on Protected Areas |
| weaana | Analysis the Weather Data |
| weakARMA | Tools for the Analysis of Weak ARMA Models |
| wearables | Tools to Read and Convert Wearables Data |
| weathermetrics | Functions to Convert Between Weather Metrics |
| WebAnalytics | Web Server Log Analysis |
| webchem | Chemical Information from the Web |
| webdeveloper | Functions for Web Development |
| webdriver | 'WebDriver' Client for 'PhantomJS' |
| webexercises | Create Interactive Web Exercises in 'R Markdown' (Formerly 'webex') |
| webfakes | Fake Web Apps for HTTP Testing |
| WebGestaltR | Gene Set Analysis Toolkit WebGestaltR |
| webglobe | 3D Interactive Globes |
| webmockr | Stubbing and Setting Expectations on 'HTTP' Requests |
| webmorphR | Reproducible Stimuli |
| webp | A New Format for Lossless and Lossy Image Compression |
| webr | Data and Functions for Web-Based Analysis |
| webreadr | Tools for Reading Formatted Access Log Files |
| websearchr | Access Domains and Search Popular Websites |
| webshot | Take Screenshots of Web Pages |
| webshot2 | Take Screenshots of Web Pages |
| websocket | 'WebSocket' Client Library |
| webtools | Various Useful Web Tools (Including Full CRAN Dataset Search and Fetch) |
| webuse | Import Stata 'webuse' Datasets |
| webutils | Utility Functions for Developing Web Applications |
| wec | Weighted Effect Coding |
| WEE | Weighted Estimated Equation (WEE) Approaches in Genetic Case-Control Studies |
| weed | Wrangler for Emergency Events Database |
| WEGE | A Metric to Rank Locations for Biodiversity Conservation |
| wehoop | Access Women's Basketball Play by Play Data |
| weibull4 | Fits Data into 4-Parameters Weibull Distribution |
| WeibullFit | Fits and Plots a Dataset to the Weibull Probability Distribution Function |
| weibullness | Goodness-of-Fit Test for Weibull Distribution (Weibullness) |
| WeibullR | Weibull Analysis for Reliability Engineering |
| WeibullR.ALT | Accelerated Life Testing Using 'WeibullR' |
| weibulltools | Statistical Methods for Life Data Analysis |
| Weighted.Desc.Stat | Weighted Descriptive Statistics |
| WeightedCluster | Clustering of Weighted Data |
| weightedGCM | Weighted Generalised Covariance Measure Conditional Independence Test |
| weightedRank | Sensitivity Analysis Using Weighted Rank Statistics |
| WeightedROC | Fast, Weighted ROC Curves |
| weightedScores | Weighted Scores Method for Regression Models with Dependent Data |
| weightedZdiff | Calculation of z-Differences |
| WeightIt | Weighting for Covariate Balance in Observational Studies |
| weightQuant | Weights for Incomplete Longitudinal Data and Quantile Regression |
| weightr | Estimating Weight-Function Models for Publication Bias |
| weights | Weighting and Weighted Statistics |
| WeightSVM | Subject Weighted Support Vector Machines |
| weirs | A Hydraulics Package to Compute Open-Channel Flow over Weirs |
| welchADF | Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality |
| wellknown | Convert Between 'WKT' and 'GeoJSON' |
| welo | Weighted and Standard Elo Rates |
| WeMix | Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum Likelihood Estimation |
| wesanderson | A Wes Anderson Palette Generator |
| wevid | Quantifying Performance of a Binary Classifier Through Weight of Evidence |
| weyl | The Weyl Algebra |
| wfe | Weighted Linear Fixed Effects Regression Models for Causal Inference |
| wfg | Weighted Fast Greedy Algorithm |
| wfindr | Crossword, Scrabble and Anagram Solver |
| wgaim | Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R |
| WGCNA | Weighted Correlation Network Analysis |
| wgeesel | Weighted Generalized Estimating Equations and Model Selection |
| WGScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |
| WgtEff | Functions for Weighting Effects |
| WhatIf | Software for Evaluating Counterfactuals |
| wheatmap | Incrementally Build Complex Plots using Natural Semantics |
| whereami | Reliably Return the Source and Call Location of a Command |
| whereport | Geolocalization of IATA Codes |
| whippr | Tools for Manipulating Gas Exchange Data |
| whisker | {{mustache}} for R, Logicless Templating |
| whitebox | 'WhiteboxTools' R Frontend |
| whitechapelR | Advanced Policing Techniques for the Board Game "Letters from Whitechapel" |
| whitening | Whitening and High-Dimensional Canonical Correlation Analysis |
| whitestrap | White Test and Bootstrapped White Test for Heteroskedasticity |
| whoa | Evaluation of Genotyping Error in Genotype-by-Sequencing Data |
| whoami | Username, Full Name, Email Address, 'GitHub' Username of the Current User |
| whomds | Calculate Results from WHO Model Disability Survey Data |
| whSample | Utilities for Sampling |
| wiad | Wood Image Analysis and Dataset |
| widals | Weighting by Inverse Distance with Adaptive Least Squares |
| widgetframe | 'Htmlwidgets' in Responsive 'iframes' |
| widyr | Widen, Process, then Re-Tidy Data |
| WienR | Derivatives of the First-Passage Time Density and Cumulative Distribution Function, and Random Sampling from the (Truncated) First-Passage Time Distribution |
| wiesbaden | Access Databases from the Federal Statistical Office of Germany |
| wig | Import WIG Data into R in Long Format |
| wikibooks | Functions and Datasets of the German WikiBook "GNU R" |
| WikidataQueryServiceR | API Client Library for 'Wikidata Query Service' |
| WikidataR | Read-Write API Client Library for Wikidata |
| wikifacts | Get Facts and Data from Wikipedia and Wikidata |
| wikilake | Scrape Lake Metadata Tables from Wikipedia |
| WikipediaR | R-Based Wikipedia Client |
| wikipediatrend | Public Subject Attention via Wikipedia Page View Statistics |
| WikipediR | A MediaWiki API Wrapper |
| wikitaxa | Taxonomic Information from 'Wikipedia' |
| wikiTools | Tools for Wikidata and Wikipedia |
| wilcoxmed | Computes Values for the 1-Sample Wilcoxon Sign Rank Test for Medians |
| wildcard | Templates for Data Frames |
| wildlifeDI | Calculate Indices of Dynamic Interaction for Wildlife Tracking Data |
| wildmeta | Cluster Wild Bootstrapping for Meta-Analysis |
| wildpoker | Best Hand Analysis for Poker Variants Including Wildcards |
| wildviz | Compiles and Visualizes Wildfire, Climate, and Air Quality Data |
| wilson | Web-Based Interactive Omics Visualization |
| winch | Portable Native and Joint Stack Traces |
| windAC | Area Correction Methods |
| WindCurves | Tool to Fit Wind Turbine Power Curves |
| windex | Analysing Convergent Evolution using the Wheatsheaf Index |
| windsoraiR | Access the 'Windsor.ai' API |
| wINEQ | Inequality Measures for Weighted Data |
| winfapReader | Interact with Peak Flow Data in the United Kingdom |
| wingui | Advanced Windows Functions |
| WinRatio | Win Ratio for Prioritized Outcomes and 95% Confidence Interval |
| WINS | The R WINS Package |
| wiqid | Quick and Dirty Estimates for Wildlife Populations |
| wISAM | Weighted Inbred Strain Association Mapping |
| wiseR | A Shiny Application for End-to-End Bayesian Decision Network Analysis and Web-Deployment |
| withr | Run Code 'With' Temporarily Modified Global State |
| wk | Lightweight Well-Known Geometry Parsing |
| wkb | Convert Between Spatial Objects and Well-Known Binary Geometry |
| wkNNMI | A Mutual Information-Weighted k-NN Imputation Algorithm |
| wktmo | Converting Weekly Data to Monthly Data |
| wkutils | Utilities for Well-Known Geometry Vectors |
| WLinfer | Statistical Inference in Weighted Lindley Distribution |
| WLreg | Regression Analysis Based on Win Loss Endpoints |
| wmm | World Magnetic Model |
| wmwpow | Precise and Accurate Power of the Wilcoxon-Mann-Whitney Rank-Sum Test for a Continuous Variable |
| WMWssp | Wilcoxon-Mann-Whitney Sample Size Planning |
| wnl | Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis |
| wNNSel | Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables |
| wnominate | Roll Call Analysis Software |
| wodds | Calculates Whisker Odds |
| woe | Computes Weight of Evidence and Information Values |
| woeBinning | Supervised Weight of Evidence Binning of Numeric Variables and Factors |
| womblR | Spatiotemporal Boundary Detection Model for Areal Unit Data |
| WoodburyMatrix | Fast Matrix Operations via the Woodbury Matrix Identity |
| WoodSimulatR | Generate Simulated Sawn Timber Strength Grading Data |
| woodValuationDE | Wood Valuation Germany |
| wooldridge | 115 Data Sets from "Introductory Econometrics: A Modern Approach, 7e" by Jeffrey M. Wooldridge |
| worcs | Workflow for Open Reproducible Code in Science |
| word.alignment | Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation |
| word2vec | Distributed Representations of Words |
| wordbankr | Accessing the Wordbank Database |
| wordcloud | Word Clouds |
| wordcloud2 | Create Word Cloud by 'htmlwidget' |
| wordgraph | Graph Functionality of Free Associated Words |
| wordler | The 'WORDLE' Game |
| wordnet | WordNet Interface |
| WordOfMouth | Estimates Economic Variables for Word-of-Mouth-Campaigns |
| wordpiece | R Implementation of Wordpiece Tokenization |
| wordpiece.data | Data for Wordpiece-Style Tokenization |
| WordPools | Classical Word Pools Used in Studies of Learning and Memory |
| wordpredictor | Develop Text Prediction Models Based on N-Grams |
| WordR | Rendering Word Documents with R Inline Code |
| words | List of English Words from the Scrabble Dictionary |
| wordsalad | Provide Tools to Extract and Analyze Word Vectors |
| wordspace | Distributional Semantic Models in R |
| workboots | Generate Bootstrap Prediction Intervals from a 'tidymodels' Workflow |
| workflowr | A Framework for Reproducible and Collaborative Data Science |
| workflows | Modeling Workflows |
| workflowsets | Create a Collection of 'tidymodels' Workflows |
| workloopR | Analysis of Work Loops and Other Data from Muscle Physiology Experiments |
| WorldFlora | Standardize Plant Names According to World Flora Online Taxonomic Backbone |
| worldfootballR | Extract and Clean World Football (Soccer) Data |
| worldmet | Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD) |
| worms | Retriving Aphia Information from World Register of Marine Species |
| worrms | World Register of Marine Species (WoRMS) Client |
| wosr | Clients to the 'Web of Science' and 'InCites' APIs |
| wowa | Weighted Ordered Weighted Average |
| wpa | Tools for Analysing and Visualising Viva Insights Data |
| WPC | Weighted Predictiveness Curve |
| wPerm | Permutation Tests |
| WPKDE | Weighted Piecewise Kernel Density Estimation |
| wpp2008 | World Population Prospects 2008 |
| wpp2010 | World Population Prospects 2010 |
| wpp2012 | World Population Prospects 2012 |
| wpp2015 | World Population Prospects 2015 |
| wpp2017 | World Population Prospects 2017 |
| wpp2019 | World Population Prospects 2019 |
| wppExplorer | Explorer of World Population Prospects |
| wql | Exploring Water Quality Monitoring Data |
| wqs | Weighted Quantile Sum Regression |
| WR | Win Ratio Analysis of Composite Time-to-Event Outcomes |
| wrangle | A Systematic Data Wrangling Idiom |
| wrappedtools | Useful Wrappers Around Commonly Used Functions |
| wrapr | Wrap R Tools for Debugging and Parametric Programming |
| wrassp | Interface to the 'ASSP' Library |
| wrGraph | Graphics in the Context of Analyzing High-Throughput Data |
| WRI | Wasserstein Regression and Inference |
| WrightMap | IRT Item-Person Map with 'ConQuest' Integration |
| write.snns | Function for exporting data to SNNS pattern files |
| writexl | Export Data Frames to Excel 'xlsx' Format |
| WriteXLS | Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files |
| wrMisc | Analyze Experimental High-Throughput (Omics) Data |
| wrProteo | Proteomics Data Analysis Functions |
| WRS2 | A Collection of Robust Statistical Methods |
| WRSS | Water Resources System Simulator |
| wrswoR | Weighted Random Sampling without Replacement |
| WRTDStidal | Weighted Regression for Water Quality Evaluation in Tidal Waters |
| wrTopDownFrag | Internal Fragment Identification from Top-Down Mass Spectrometry |
| wru | Who are You? Bayesian Prediction of Racial Category Using Surname, First Name, Middle Name, and Geolocation |
| wsbackfit | Weighted Smooth Backfitting for Structured Models |
| WSGeometry | Geometric Tools Based on Balanced/Unbalanced Optimal Transport |
| wsjplot | Style Time Series Plots Like the Wall Street Journal |
| wskm | Weighted k-Means Clustering |
| wsprv | Weighted Selection Probability for Rare Variant Analysis |
| wsrf | Weighted Subspace Random Forest for Classification |
| wsyn | Wavelet Approaches to Studies of Synchrony in Ecology and Other Fields |
| wtest | The W-Test for Genetic Interactions Testing |
| wTO | Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network |
| WtTopsis | Weighted Method for Multiple-Criteria Decision Making |
| WufooR | R Wrapper for the 'Wufoo.com' - The Form Building Service |
| wux | Wegener Center Climate Uncertainty Explorer |
| wv | Wavelet Variance |
| WVPlots | Common Plots for Analysis |
| WWGbook | Functions and Datasets for WWGbook |
| WWR | Weighted Win Loss Statistics and their Variances |
| wyz.code.metaTesting | Wizardry Code Meta Testing |
| wyz.code.offensiveProgramming | Wizardry Code Offensive Programming |
| wyz.code.rdoc | Wizardry Code Offensive Programming R Documentation |
| wyz.code.testthat | Wizardry Code Offensive Programming Test Generation |
| x.ent | eXtraction of ENTity |
| x12 | Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment |
| x13binary | Provide the 'x13ashtml' Seasonal Adjustment Binary |
| x3ptools | Tools for Working with 3D Surface Measurements |
| xadmix | Subsetting and Plotting Optimized for Admixture Data |
| xaringan | Presentation Ninja |
| xaringanExtra | Extras and Extensions for 'xaringan' Slides |
| xaringanthemer | Custom 'xaringan' CSS Themes |
| xbreed | Genomic Simulation of Purebred and Crossbred Populations |
| XBRL | Extraction of Business Financial Information from 'XBRL' Documents |
| xdcclarge | Estimating a (c)DCC-GARCH Model in Large Dimensions |
| xefun | X-Engineering or Supporting Functions |
| xergm.common | Common Infrastructure for Extensions of Exponential Random Graph Models |
| xesreadR | Read and Write XES Files |
| xfun | Supporting Functions for Packages Maintained by 'Yihui Xie' |
| xgb2sql | Convert Trained 'XGBoost' Model to SQL Query |
| xgboost | Extreme Gradient Boosting |
| xgxr | Exploratory Graphics for Pharmacometrics |
| XICOR | Association Measurement Through Cross Rank Increments |
| XiMpLe | A Simple XML Tree Parser and Generator |
| xkcd | Plotting ggplot2 Graphics in an XKCD Style |
| xkcdcolors | Color Names from the XKCD Color Survey |
| XKCDdata | Get XKCD Comic Data |
| XLConnect | Excel Connector for R |
| xlink | Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes |
| xLLiM | High Dimensional Locally-Linear Mapping |
| XLS | A Modeling Approach that Optimizes Future Errors in Least Squares |
| xlsx | Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files |
| xlsx2dfs | Read and Write 'Excel' Sheets into and from List of Data Frames |
| xlsxjars | Package required POI jars for the xlsx package |
| xlutils3 | Extract Multiple Excel Files at Once |
| xmeta | A Toolbox for Multivariate Meta-Analysis |
| XML | Tools for Parsing and Generating XML Within R and S-Plus |
| xml2 | Parse XML |
| XML2R | EasieR XML data collection |
| xml2relational | Converting XML Documents into Relational Data Models |
| xmlconvert | Comfortably Converting XML Documents to Dataframes and Vice Versa |
| xmlparsedata | Parse Data of 'R' Code as an 'XML' Tree |
| xmlr | Read, Write and Work with 'XML' Data |
| xmlrpc2 | Implementation of the Remote Procedure Call Protocol ('XML-RPC') |
| xmrr | Generate XMR Control Chart Data from Time-Series Data |
| xnet | Two-Step Kernel Ridge Regression for Network Predictions |
| XNomial | Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities |
| xoi | Tools for Analyzing Crossover Interference |
| xopen | Open System Files, 'URLs', Anything |
| xpectr | Generates Expectations for 'testthat' Unit Testing |
| xplain | Providing Interactive Interpretations and Explanations of Statistical Results |
| xplorerr | Tools for Interactive Data Exploration |
| Xplortext | Statistical Analysis of Textual Data |
| xportr | Utilities to Output CDISC SDTM/ADaM XPT Files |
| xpose | Diagnostics for Pharmacometric Models |
| xpose.nlmixr | Graphical Diagnostics for Pharmacometric Models: Extension to 'nlmixr' |
| xpose.nlmixr2 | Graphical Diagnostics for Pharmacometric Models: Extension to 'nlmixr2' |
| xpose4 | Diagnostics for Nonlinear Mixed-Effect Models |
| xptr | Manipulating External Pointer |
| XR | A Structure for Interfaces from R |
| xray | X Ray Vision on your Datasets |
| xrf | eXtreme RuleFit |
| xRing | Identify and Measure Tree Rings on X-Ray Micro-Density Profiles |
| XRJulia | Structured Interface to Julia |
| xrnet | Hierarchical Regularized Regression |
| xROI | Delineate Region of Interests (ROI's) and Extract Time-Series Data from Digital Repeat Photography Images |
| XRPython | Structured Interface to 'Python' |
| XRSCC | Statistical Quality Control Simulation |
| xslt | Extensible Style-Sheet Language Transformations |
| xsp | The Chi-Square Periodogram |
| xspliner | Assisted Model Building, using Surrogate Black-Box Models to Train Interpretable Spline Based Additive Models |
| xSub | Cross-National Data on Sub-National Violence |
| xtable | Export Tables to LaTeX or HTML |
| xtal | Crystallization Toolset |
| xtensor | Headers for the 'xtensor' Library |
| xtermStyle | Terminal Text Formatting Using Escape Sequences |
| xtreg2way | Feasible Estimation of the Two-Way Fixed Effect Model |
| xts | eXtensible Time Series |
| xutils | Utility Functions of Fangzhou Xie |
| xVA | Calculates Credit Risk Valuation Adjustments |
| xwf | Extrema-Weighted Feature Extraction |
| xxIRT | Item Response Theory and Computer-Based Testing in R |
| yacca | Yet Another Canonical Correlation Analysis Package |
| yaConsensus | Consensus Clustering of Omic Data |
| yager | Yet Another General Regression Neural Network |
| yaImpute | Nearest Neighbor Observation Imputation and Evaluation Tools |
| yakmoR | A Simple Wrapper for the k-Means Library Yakmo |
| YaleToolkit | Data Exploration Tools from Yale University |
| yaml | Methods to Convert R Data to YAML and Back |
| yamlet | Versatile Curation of Table Metadata |
| yamlme | Writing 'YAML' Headers for 'R-Markdown' Documents |
| Yamm | Multivariate Methods Based on Projections and Related Concepts |
| yap | Yet Another Probabilistic Neural Network |
| yaps | Track Estimation using YAPS (Yet Another Positioning Solver) |
| yardstick | Tidy Characterizations of Model Performance |
| yarr | Yet Another 'ARFF' Reader |
| yarrr | A Companion to the e-Book "YaRrr!: The Pirate's Guide to R" |
| yasp | String Functions for Compact R Code |
| yatah | Yet Another TAxonomy Handler |
| YatesAlgo.FactorialExp.SR | Yates' Algorithm in 2^n Factorial Experiment |
| ycevo | Nonparametric Estimation of the Yield Curve Evolution |
| yesno | Ask Yes-No Questions |
| yfR | Downloads and Organizes Financial Data from Yahoo Finance |
| yhat | Interpreting Regression Effects |
| yhatr | R Binder for the Yhat API |
| yll | Compute Expected Years of Life Lost (YLL) and Average YLL |
| ymd | Parse 'YMD' Format Number or String to Date |
| ymlthis | Write 'YAML' for 'R Markdown', 'bookdown', 'blogdown', and More |
| ympes | Collection of Helper Functions |
| yonder | A Reactive Web Framework Built on 'shiny' |
| yorkr | Analyze Cricket Performances Based on Data from Cricsheet |
| youngSwimmers | Young Swimmers Dataset |
| youtubecaption | Downloading YouTube Subtitle Transcription in a Tidy Tibble Data Frame |
| yowie | Longitudinal Wages Data from the National Longitudinal Survey of Youth 1979 |
| YPBP | Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials |
| YPInterimTesting | Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials |
| YPmodel | The Short-Term and Long-Term Hazard Ratio Model for Survival Data |
| YPPE | Yang and Prentice Model with Piecewise Exponential Baseline Distribution |
| ypr | Yield Per Recruit |
| ypssc | Yeast-Proteome Secondary-Structure Calculator |
| YRmisc | Y&R Miscellaneous R Functions |
| yuima | The YUIMA Project Package for SDEs |
| yuimaGUI | A Graphical User Interface for the 'yuima' Package |
| yulab.utils | Supporting Functions for Packages Maintained by 'YuLab-SMU' |
| yum | Utilities to Extract and Process 'YAML' Fragments |
| Z10 | Simple Ecological Statistics from the NEON Network |
| zalpha | Run a Suite of Selection Statistics |
| zbank | 'ZooBank' API Client |
| zCompositions | Treatment of Zeros, Left-Censored and Missing Values in Compositional Data Sets |
| zcurve | An Implementation of Z-Curves |
| zdeskR | Connect to Your 'Zendesk' Data |
| zeallot | Multiple, Unpacking, and Destructuring Assignment |
| ZeBook | Working with Dynamic Models for Agriculture and Environment |
| zebu | Local Association Measures |
| zeitgebr | Analysis of Circadian Behaviours |
| zen4R | Interface to 'Zenodo' REST API |
| zendeskR | Zendesk API Wrapper |
| zenplots | Zigzag Expanded Navigation Plots |
| zeroEQpart | Zero Order vs (Semi) Partial Correlation Test and CI |
| zerotradeflow | An Implementation for the Gravitational Models of Trade |
| zetadiv | Functions to Compute Compositional Turnover Using Zeta Diversity |
| ZetaSuite | Analyze High-Dimensional High-Throughput Dataset and Quality Control Single-Cell RNA-Seq |
| zfa | Zoom-Focus Algorithm |
| zfit | Fit Models in a Pipe |
| ZIBseq | Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression |
| zic | Bayesian Inference for Zero-Inflated Count Models |
| ZillowR | R Interface to Zillow Real Estate and Mortgage Data API |
| ZIM | Zero-Inflated Models (ZIM) for Count Time Series with Excess Zeros |
| ZINARp | Simulate INAR/ZINAR(p) Models and Estimate Its Parameters |
| zip | Cross-Platform 'zip' Compression |
| zipangu | Japanese Utility Functions and Data |
| ZIPBayes | Bayesian Methods in the Analysis of Zero-Inflated Poisson Model |
| zipcodeR | Data & Functions for Working with US ZIP Codes |
| ZIPFA | Zero Inflated Poisson Factor Analysis |
| zipfextR | Zipf Extended Distributions |
| zipfR | Statistical Models for Word Frequency Distributions |
| ziphsmm | Zero-Inflated Poisson Hidden (Semi-)Markov Models |
| zipR | Pythonic Zip() for R |
| ZIprop | Permutations Tests and Performance Indicator for Zero-Inflated Proportions Response |
| zipsae | Small Area Estimation with Zero-Inflated Model |
| zlog | Z(log) Transformation for Laboratory Measurements |
| zmisc | Vector Look-Ups and Safer Sampling |
| zoeppritz | Seismic Reflection and Scattering Coefficients |
| zoib | Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression |
| zoid | Bayesian Zero-and-One Inflated Dirichlet Regression Modelling |
| zoltr | Interface to the 'Zoltar' Forecast Repository API |
| zonator | Utilities for Zonation Spatial Conservation Prioritization Software |
| zonebuilder | Create and Explore Geographic Zoning Systems |
| zoo | S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations) |
| zooaRch | Analytical Tools for Zooarchaeological Data |
| zooimage | Analysis of Numerical Plankton Images |
| zoolog | Zooarchaeological Analysis with Log-Ratios |
| zoom | A Spatial Data Visualization Tool |
| zoomGroupStats | Analyze Text, Audio, and Video from 'Zoom' Meetings |
| zoon | Reproducible, Accessible & Shareable Species Distribution Modelling |
| ZRA | Dynamic Plots for Time Series Forecasting |
| zscorer | Child Anthropometry z-Score Calculator |
| Zseq | Integer Sequence Generator |
| ztable | Zebra-Striped Tables in LaTeX and HTML Formats |
| ztpln | Zero-Truncated Poisson Lognormal Distribution |
| zTree | Functions to Import Data from 'z-Tree' into R |
| ztype | Run a Ztype Game Loaded with R Functions |
| ZVCV | Zero-Variance Control Variates |
| zyp | Zhang + Yue-Pilon Trends Package |
| zzlite | Lite Wrapper for the 'Zamzar File Conversion' API |