ChIPtest: Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data

Nonparametric Tests to identify the differential enrichment region for two conditions or time-course ChIP-seq data. It includes: data preprocessing function, estimation of a small constant used in hypothesis testing, a kernel-based two sample nonparametric test, two assumption-free two sample nonparametric test.

Version:	1.0
Published:	2016-07-20
Author:	Vicky Qian Wu ; Kyoung-Jae Won ; Hongzhe Li
Maintainer:	Vicky Qian Wu <wuqian7 at gmail.com>
License:	GPL (≥ 2.15.1)
NeedsCompilation:	yes
CRAN checks:	ChIPtest results

Documentation:

Reference manual:

ChIPtest.pdf

Downloads:

Package source:	ChIPtest_1.0.tar.gz
Windows binaries:	r-devel: ChIPtest_1.0.zip, r-release: ChIPtest_1.0.zip, r-oldrel: ChIPtest_1.0.zip
macOS binaries:	r-release (arm64): ChIPtest_1.0.tgz, r-oldrel (arm64): ChIPtest_1.0.tgz, r-release (x86_64): ChIPtest_1.0.tgz, r-oldrel (x86_64): ChIPtest_1.0.tgz

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