R package pedSimulate: Pedigree, genetic merit and phenotype simulation
Version: 0.0.3
Version: 0.0.4
- Applying mortality to each generation separately rather than on selection candidates, which may come from more than a single generation.
Version: 0.1.1
- Added function
assortative for assortative/disassortative mating.
- Added
"-P" and "-PA" to arguments fsel and msel to select in opposite directions of "P" (phenotype) and "PA" (parent average).
Version: 0.1.2
- Debugged the bug introduced in the previous version in the
simulatePed function.
Version: 1.0.0
- Major revision
- Functions
simulatePed and assortative were combined into simulatePed, and arguments fullsib and parentprogeny were removed.
- Added function
appendPed for simulating new generations from an existing pedigree and appending to it.
- Added function
fs_mate_finder for finding fullsib matings in the pedigree.
- Added function
hs_mate_finder for finding halfsib matings in the pedigree.
- Added function
pp_mate_finder for finding parent-progeny matings in the pedigree.
Version: 1.0.1
Version: 1.1.0
- Added agrumnts
f.order and m.order to simulatePed and appendPed functions.
Version: 1.1.1
- Debugged for sampling from a sample size of 1.
Version: 1.2.0
- Added function
simulateGen for simulating genotypes.
Version: 1.2.1
- Fixed a small bug in
hs_mate_finder.
Version: 1.3.0
- A major debug:
%in% (-overlap.s:0)+i-1 was performing differently from %in% ((-overlap.s:0)+i-1), similarly %in% (-overlap.d:0)+i-1 and %in% ((-overlap.d:0)+i-1).
- Added function
appendGen for simulating genotypes for an appended pedigree to an existing pedigree with genotypes.
Version: 1.3.1
- A small (same) debug in
simulatePed and appendPed.
Version: 1.3.2
- Added
seed argument to functions for reproducible outputs.