* using log directory 'd:/Rcompile/CRANpkg/local/3.5/vpc.Rcheck'
* using R version 3.5.3 (2019-03-11)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'vpc/DESCRIPTION' ... OK
* this is package 'vpc' version '1.1.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'vpc' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [10s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [28s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [41s] ERROR
  Running 'test-add_sim_index_number.R' [4s]
  Running 'test-filter_dv.R' [1s]
  Running 'test-labeller.R' [7s]
  Running 'test-softwaretype.R' [1s]
  Running 'test-strat-col-detection.R' [1s]
  Running 'test-vpc.R' [6s]
  Running 'test-vpc_cat.R' [3s]
  Running 'test-vpc_cens.R' [9s]
  Running 'test-vpc_tte.R' [9s]
Running the tests in 'tests/test-add_sim_index_number.R' failed.
Complete output:
  > library(dplyr)
  
  Attaching package: 'dplyr'
  
  The following objects are masked from 'package:stats':
  
      filter, lag
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  > library(vpc)
  > library(testit)
  > Sys.setenv("R_TESTS" = "")
  > 
  > ## Load the theophylline PK dataset
  > obs <- Theoph
  > colnames(obs) <- c("id", "wt", "dose", "time", "dv")
  > obs <- obs %>%
  +   dplyr::group_by(id) %>%
  +   mutate(sex = round(runif(1))) # randomly assign a "sex" covariate
  > sim <- sim_data(obs, # the design of the dataset
  +                 model = function(x) { # the model
  +                   vpc:::pk_oral_1cmt (t = x$time, dose=x$dose * x$wt, ka = x$ka, ke = x$ke, cl = x$cl * x$wt)
  +                 },
  +                 error = list(additive = 0.1),
  +                 theta = c(2.774, 0.0718, .0361),                 # parameter values
  +                 omega_mat = c(0.08854,                           # specified as lower triangle by default;
  +                               0.02421, 0.02241,                  # note: assumed that every theta has iiv, set to 0 if no iiv.
  +                               0.008069, 0.008639, 0.02862),
  +                 par_names = c("ka", "ke", "cl"),                 # link the parameters in the model to the thetas/omegas
  +                 n = 500)
  Error: Assigned data `model(tmp_pred)` must be compatible with existing data.
  x Existing data has 66000 rows.
  x Assigned data has 132 rows.
  i Only vectors of size 1 are recycled.
  Backtrace:
      x
   1. \-vpc::sim_data(...)
   2.   +-base::`$<-`(...)
   3.   \-tibble:::`$<-.tbl_df`(...)
   4.     \-tibble:::tbl_subassign(...)
   5.       \-tibble:::vectbl_recycle_rhs(...)
   6.         \-base::tryCatch(...)
   7.           \-base:::tryCatchList(expr, classes, parentenv, handlers)
   8.             \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
   9.               \-value[[3L]](cond)
  Execution halted
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR