* using log directory 'd:/Rcompile/CRANpkg/local/3.5/tramME.Rcheck'
* using R version 3.5.3 (2019-03-11)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'tramME/DESCRIPTION' ... OK
* this is package 'tramME' version '0.0.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'tramME' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 20.6Mb
  sub-directories of 1Mb or more:
    libs  19.8Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
** checking use of S3 registration ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
** checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [10s] NOTE
.nobars: no visible global function definition for 'str2lang'
.subbars: no visible global function definition for 'str2lang'
.tramME: no visible global function definition for 'str2lang'
Undefined global functions or variables:
  str2lang
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... ERROR
Running examples in 'tramME-Ex.R' failed
The error most likely occurred in:

> ### Name: VarCorr.LmME
> ### Title: Variances and correlation matrices of random effects of an LmME
> ###   object
> ### Aliases: VarCorr.LmME
> 
> ### ** Examples
> 
> data("sleepstudy", package = "lme4")
> fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
Error in str2lang(paste0("tram::", fname)) : 
  could not find function "str2lang"
Calls: LmME -> .tramME
Execution halted
** running examples for arch 'x64' ... ERROR
Running examples in 'tramME-Ex.R' failed
The error most likely occurred in:

> ### Name: VarCorr.LmME
> ### Title: Variances and correlation matrices of random effects of an LmME
> ###   object
> ### Aliases: VarCorr.LmME
> 
> ### ** Examples
> 
> data("sleepstudy", package = "lme4")
> fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
Error in str2lang(paste0("tram::", fname)) : 
  could not find function "str2lang"
Calls: LmME -> .tramME
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ... [16s] ERROR
  Running 'LmME.R' [3s]
  Running 'basics.R' [3s]
  Running 'methods.R' [3s]
  Running 'predict.R' [3s]
  Running 'simulate.R' [3s]
Running the tests in 'tests/LmME.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > library("lme4")
  Loading required package: Matrix
  > 
  > chktol <- function(x, y, tol = sqrt(.Machine$double.eps))
  +   stopifnot(isTRUE(all.equal(x, y, tol = tol, check.attributes = FALSE)))
  > 
  > data("sleepstudy")
  > 
  > fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
Running the tests in 'tests/basics.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y) stopifnot(isTRUE(all.equal(x, y)))
  > chkerr <- function(expr) inherits(try(expr, silent = TRUE), "try-error")
  > 
  > ## nofit
  > library("survival")
  > data("eortc", package = "coxme")
  > fit <- CoxphME(Surv(y, uncens) ~ trt, data = eortc, log_first = TRUE, nofit = TRUE)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: CoxphME -> .tramME
  Execution halted
Running the tests in 'tests/methods.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chktol <- function(x, y, tol = sqrt(.Machine$double.eps))
  +   stopifnot(isTRUE(all.equal(x, y, tolerance = tol, check.attributes = FALSE)))
  > 
  > chkerr <- function(expr) inherits(try(expr, silent = TRUE), "try-error")
  > 
  > ## covariance matrix of the parameters
  > data("sleepstudy", package = "lme4")
  > fit <- BoxCoxME(Reaction ~ Days + (Days | Subject), data = sleepstudy, order = 5)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: BoxCoxME -> .tramME
  Execution halted
Running the tests in 'tests/predict.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y) stopifnot(isTRUE(all.equal(x, y, check.attributes = FALSE)))
  > 
  > ## structure of the output
  > data("sleepstudy", package = "lme4")
  > fit <- LmME(Reaction ~ Days + (1 | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
Running the tests in 'tests/simulate.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y, ...) stopifnot(isTRUE(all.equal(x, y, ...)))
  > chkerr <- function(x) inherits(try(x), "try-error")
  > 
  > ## structure of the output
  > data("sleepstudy", package = "lme4")
  > fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
** running tests for arch 'x64' ... [15s] ERROR
  Running 'LmME.R' [3s]
  Running 'basics.R' [3s]
  Running 'methods.R' [3s]
  Running 'predict.R' [3s]
  Running 'simulate.R' [3s]
Running the tests in 'tests/LmME.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > library("lme4")
  Loading required package: Matrix
  > 
  > chktol <- function(x, y, tol = sqrt(.Machine$double.eps))
  +   stopifnot(isTRUE(all.equal(x, y, tol = tol, check.attributes = FALSE)))
  > 
  > data("sleepstudy")
  > 
  > fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
Running the tests in 'tests/basics.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y) stopifnot(isTRUE(all.equal(x, y)))
  > chkerr <- function(expr) inherits(try(expr, silent = TRUE), "try-error")
  > 
  > ## nofit
  > library("survival")
  > data("eortc", package = "coxme")
  > fit <- CoxphME(Surv(y, uncens) ~ trt, data = eortc, log_first = TRUE, nofit = TRUE)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: CoxphME -> .tramME
  Execution halted
Running the tests in 'tests/methods.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chktol <- function(x, y, tol = sqrt(.Machine$double.eps))
  +   stopifnot(isTRUE(all.equal(x, y, tolerance = tol, check.attributes = FALSE)))
  > 
  > chkerr <- function(expr) inherits(try(expr, silent = TRUE), "try-error")
  > 
  > ## covariance matrix of the parameters
  > data("sleepstudy", package = "lme4")
  > fit <- BoxCoxME(Reaction ~ Days + (Days | Subject), data = sleepstudy, order = 5)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: BoxCoxME -> .tramME
  Execution halted
Running the tests in 'tests/predict.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y) stopifnot(isTRUE(all.equal(x, y, check.attributes = FALSE)))
  > 
  > ## structure of the output
  > data("sleepstudy", package = "lme4")
  > fit <- LmME(Reaction ~ Days + (1 | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
Running the tests in 'tests/simulate.R' failed.
Complete output:
  > library("tramME")
  Loading required package: tram
  Loading required package: mlt
  Loading required package: basefun
  Loading required package: variables
  > 
  > chk <- function(x, y, ...) stopifnot(isTRUE(all.equal(x, y, ...)))
  > chkerr <- function(x) inherits(try(x), "try-error")
  > 
  > ## structure of the output
  > data("sleepstudy", package = "lme4")
  > fit <- LmME(Reaction ~ Days + (Days | Subject), data = sleepstudy)
  Error in str2lang(paste0("tram::", fname)) : 
    could not find function "str2lang"
  Calls: LmME -> .tramME
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... [7s] WARNING
Error in re-building vignettes:
  ...
Loading required package: tram
Loading required package: mlt
Loading required package: basefun
Loading required package: variables

Attaching package: 'ggplot2'

The following object is masked from 'package:variables':

    unit

Loading required package: Matrix
Quitting from lines 409-412 (tramME.Rnw) 
Error: processing vignette 'tramME.Rnw' failed with diagnostics:
could not find function "str2lang"
Execution halted

* checking PDF version of manual ... OK
* DONE
Status: 4 ERRORs, 1 WARNING, 2 NOTEs