* using log directory 'd:/Rcompile/CRANpkg/local/3.5/camtrapR.Rcheck' * using R version 3.5.3 (2019-03-11) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'camtrapR/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'camtrapR' version '2.0.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'camtrapR' can be installed ... OK * checking installed package size ... NOTE installed size is 8.5Mb sub-directories of 1Mb or more: doc 4.0Mb pictures 3.9Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [23s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [5s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [36s] OK Running 'test-all.R' [36s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [37s] WARNING Error in re-building vignettes: ... Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationA/IMG0001.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationA/IMG0002.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationA/IMG0003.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationB/IMG0001.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationB/IMG0002.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/raw_images/StationB/IMG0003.JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-04-21__00-40-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-04-22__20-19-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-04-22__20-21-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-04-23__00-07-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-04-23__00-09-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/PBE/StationA__2009-05-07__17-11-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/VTA/StationA__2009-04-10__05-07-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationA/VTA/StationA__2009-05-06__19-06-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-15__07-21-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-15__07-23-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-47-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-47-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-48-00(3).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/MNE/StationB__2009-04-28__17-49-00(3).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-05__00-11-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-05__23-13-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-07__00-23-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-10__04-07-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-10__04-08-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-14__06-13-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-24__22-54-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-25__04-33-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-04-25__04-33-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/PBE/StationB__2009-05-14__02-11-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/UNID/StationB__2009-05-07__18-45-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/VTA/StationB__2009-04-15__19-12-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationB/VTA/StationB__2009-04-27__05-07-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-06__03-49-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-12__20-26-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-12__20-26-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-23__02-25-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-23__02-27-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-25__03-09-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-04-27__00-17-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-05-02__03-35-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/EGY/StationC__2009-05-02__03-36-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-06__03-00-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-06__03-00-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-14__23-30-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-14__23-30-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-18__22-57-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-23__03-33-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-04-23__03-34-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-05-05__18-24-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-05-05__18-25-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/PBE/StationC__2009-05-07__18-47-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-11__21-44-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-11__21-46-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-11__21-46-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-13__22-38-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-13__22-38-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-14__00-18-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-14__00-18-00(2).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-24__19-26-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-24__19-27-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-27__00-19-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-04-27__00-20-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-01__20-10-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-01__20-12-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-02__00-10-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-02__00-11-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-12__02-32-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/TRA/StationC__2009-05-12__02-34-00(1).JPG Warning: [minor] Entries in IFD0 were out of sequence. Fixed. - D:/temp/RtmpesunEF/sample_images_species_dir/StationC/VTA/StationC__2009-04-24__02-57-00(1).JPG This is secr 4.2.2. For overview type ?secr Quitting from lines 293-296 (camtrapr3.Rmd) Error: processing vignette 'camtrapr3.Rmd' failed with diagnostics: unused argument (rev = TRUE) Execution halted * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 1 NOTE