EpiInvert |
'EpiInvert' estimates the reproduction number Rt and a restored incidence curve from the original daily incidence curve and the serial interval distribution. EpiInvert also corrects the festive and weekly biases present in the registered daily incidence. |
EpiInvertForecast |
'EpiInvertForecast' computes a 28-day forecast of the restored incidence curve including confidence interval radius using the percentiles 50,75,90 and 95. using the weekly seasonality, from the forecasted restored incidence curve we also estimate a 28-day forecast of the original incidence curve. |
EpiInvertForecast_plot |
'EpiInvertForecast_plot' plot the restored incidence forecast |
EpiInvert_plot |
'EpiInvert_plot' plots the results obtained by EpiInvert |
festives |
A dataset containing festive days in France, Germany, UK and the USA |
incidence |
A dataset containing daily incidence of COVID-19 for France, Germany, UK and the USA |
incidence_weekly_aggregated |
A dataset containing weekly aggregated incidence of COVID-19 for France, Germany, UK and the USA |
restored_incidence_database |
A dataset including 27,418 samples of different restored incidence curves computed by EpiInvert using real data. Each restored incidence curve includes the last 56 values of the sequence. |
select_params |
'select_params' function to select EpiInvert parameters |
si_distr_data |
A dataset containing the values of a serial interval |